Pregenerated sensors for ARSJ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046561Ensembl transcript IDs: ENSMUST00000093976.4
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTaGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: FLSCYPVITLHSSTR*VTVPLVIQGIQSIL Trigger: CAGAATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR GCA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTaGCGTTTCTTTAAGCAGGATAAGATGAGATACAAGCTGTCCACG | + |
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Preference number: 1 (lower is better) Translates to: LGRSYIHFWQCSDTI*RFFKQDKMRYKLST Trigger: CGTGGACAGCTTGTATCTCATCTTATCCTGCTTAAAGAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR CCA 90 bp | ATTCTTGTTCTATCAAAGTGTTTGGGACGTAGTTACATTCATTTCTaGCAATGTTCAGACACTATCTGCCGTTTCTTTAAGCAGGATAAG | + |
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Preference number: 1 (lower is better) Translates to: ILVLSKCLGRSYIHF*QCSDTICRFFKQDK Trigger: CTTATCCTGCTTAAAGAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACTTTGATAGAACAAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR CAA 90 bp | AACAAGCCCGAGGCGGTTGGCCGAGGTATTTCTGAGCCAATTTCTTaGAATTACCTAGAAACCAGGCAGTCTAAGTTTAACCAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: NKPEAVGRGISEPIS*NYLETRQSKFNQGR Trigger: TCTGCCTTGGTTAAACTTAGACTGCCTGGTTTCTAGGTAATTCAAAGAAATTGGCTCAGAAATACCTCGGCCAACCGCCTCGGGCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGTGGCACAGAGCAATGTaGAAACAAGCCCGAGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: SHLFIMLPCNYPALKYTVWHRAM*KQARGG Trigger: ACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCA...CACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR-3UTR GCA 90 bp | GATACAACCTCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATCCTCCCTGTGTGGCCTaGAGAAGCATAGCCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: DTTSDGIKSHLFIMLPCNPPCVA*RSIAFG Trigger: GCCAAAGGCTATGCTTCTGCAGGCCACACAGGGAGG...ATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGAGGTTGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGTACACGGTGGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATTGGCCGAGGTATTTCTaGGCCAATTTCTTTGAATTA | + |
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Preference number: 2 (lower is better) Translates to: LKYTVGHSSSRDSRDSKHWPRYF*ANFFEL Trigger: TAATTCAAAGAAATTGGCTCAGAAATACCTCGGCCA...ATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR TCA 72 bp | TGCACTCAAGTACACGGTGGGTCACAGTTCCTCTCGTaGTTCAAGGGATTCAAAGCATTCTGTTTGGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: CTQVHGGSQFLS*FKGFKAFCLVN Trigger: GTTGACCAAACAGAATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR CCA 72 bp | TGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTaGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAA | + |
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Preference number: 3 (lower is better) Translates to: CYPVITLHSSTR*VTVPLVIQGIQ Trigger: TTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTTCTCTGAGCCAATTTCTTaGAATTACCTAGAAACCAGG | + |
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Preference number: 3 (lower is better) Translates to: LGRSYIHFWQCSDTICRFSEPIS*NYLETR Trigger: CCTGGTTTCTAGGTAATTCAAAGAAATTGGCTCAGA...GAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCTTCAAAGCATTCTGTTaGGTCAACTCACTCATGATT | + |
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Preference number: 3 (lower is better) Translates to: KCLGRSYIHFWQCSDTICFKAFC*VNSLMI Trigger: AATCATGAGTGAGTTGACCAAACAGAATGCTTTGAA...GCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR GCA 72 bp | AGTTACATTCATTTCTGGCAATGTTCAGACACTATCTaGCGTTTCTTTAAGCAGGATAAGATGAGATACAAG | + |
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Preference number: 3 (lower is better) Translates to: SYIHFWQCSDTI*RFFKQDKMRYK Trigger: CTTGTATCTCATCTTATCCTGCTTAAAGAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | GTACCAGAAGTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCGGGCTGGGAGGTGCCTaGTGTGCCTGCTTCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VPEVSGTEQCENKPEAVGGLGGA*CACFRS Trigger: AGACCTGAAGCAGGCACAGCAGGCACCTCCCAGCCC...GCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGACTTCTGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | GTACCAGAAGTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCTTTAGAAGTGGGCTATaGACAAAGCCAACTGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VPEVSGTEQCENKPEAVGFRSGL*TKPTAR Trigger: CCGGGCAGTTGGCTTTGTGCATAGCCCACTTCTAAA...GCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGACTTCTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | GTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCCGAGGTATTGATGGCCGACTGGATTaGAGTGTTCCAGATCCCATA | + |
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Preference number: 4 (lower is better) Translates to: VSGTEQCENKPEAVGRGIDGRLD*SVPDPI Trigger: TATGGGATCTGGAACACTGCAATCCAGTCGGCCATC...AATACCTCGGCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | GTACCAGAAGTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCAGTCCCGTGTGTATCTaGTACTTTCCGGTAATAAAC | + |
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Preference number: 4 (lower is better) Translates to: VPEVSGTEQCENKPEAVGSPVCI*YFPVIN Trigger: GTTTATTACCGGAAAGTATCAGATACACACGGGACT...GCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGACTTCTGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | GTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCCGAGGTATTGTCATAGTCCCAAGCTaGATTGTCGTTTTCGTACAA | + |
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Preference number: 4 (lower is better) Translates to: VSGTEQCENKPEAVGRGIVIVPS*IVVFVQ Trigger: TTGTACGAAAACGACAATGCAGCTTGGGACTATGAC...AATACCTCGGCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | ACAAGCTGTCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATATGCACAAAGCCAACTaGCCGGATGCCTCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSCPRREAAFSQRTGDCNMHKAN*PDASFP Trigger: TGGGAAGGAGGCATCCGGGCAGTTGGCTTTGTGCAT...ATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGACAGCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TACACGGTGGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATTCTGTTAAAATGAGATGGGGCTaGGAGGTGCCTGCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: YTVGHSSSRDSRDSKHSVKMRWG*EVPAVP Trigger: AGGCACAGCAGGCACCTCCCAGCCCCATCTCATTTT...AACAGAATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | TACACGGTGGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATTCTGTTGGTCTCTCATCAACTTaGGCTTTTAGGGACCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: YTVGHSSSRDSRDSKHSVGLSST*AFRDPS Trigger: GGAGGGGTCCCTAAAAGCTCAAGTTGATGAGAGACC...AACAGAATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTTCCCTCCTGCTGTGGGCTaGCCACCATTATCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGRSYIHFWQCSDTICRFPPAVG*PPLSEE Trigger: CTCCTCAGATAATGGTGGGCAGCCCACAGCAGGAGG...GAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | ATGAGATACAAGCTGTCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACCAGTTACTTCCTCCTaGTGTGGGCTGCCCACCATT | + |
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Preference number: 4 (lower is better) Translates to: MRYKLSTKRSSFFSENRRPVTSS*CGLPTI Trigger: AATGGTGGGCAGCCCACAGCAGGAGGAAGTAACTGG...TCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGACAGCTTGTATCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | ATGAGATACAAGCTGTCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGAAGCCAACTGCCCGGATaGCTCCTTCCCAATATGTTC | + |
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Preference number: 4 (lower is better) Translates to: MRYKLSTKRSSFFSENRRSQLPG*LLPNMF Trigger: GAACATATTGGGAAGGAGGCATCCGGGCAGTTGGCT...TCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGACAGCTTGTATCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | GTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTCGATGCCTGGATACCTaGTGGATAGGTCCACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VWDVVTFISGNVQTLSAVRCLDT*WIGPPS Trigger: AGAGGGTGGACCTATCCAGCAGGTATCCAGGCATCG...AACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTTCACCCGGATGGCCGACTaGATTGCAGTGTTCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: LGRSYIHFWQCSDTICRFTRMAD*IAVFQI Trigger: GATCTGGAACACTGCAATCCAGTCGGCCATCCGGGT...GAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | AGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCTTCCTTTGCTGCCTCTaGGTGGCCAGTTACTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SVWDVVTFISGNVQTLSAFLCCL*VASYFL Trigger: GAGGAAGTAACTGGCCACTCAGAGGCAGCAAAGGAA...GGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | ATGAGATACAAGCTGTCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGTCCTTCAGCCAGTaGAATCAAGGTTGGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: MRYKLSTKRSSFFSENRRLSFSQ*NQGWVP Trigger: TGGTACCCAACCTTGATTTCACTGGCTGAAGGACAG...TCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGACAGCTTGTATCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | TCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCAGGGAGGTGCCTGCTGTaGCTGCTTCAGGTCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SDGIKSHLFIMLPCNYPAGRCLL*LLQVSH Trigger: ATGAGAGACCTGAAGCAGGCACAGCAGGCACCTCCC...TGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | GTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTATTGTGCCACCGGTTTaGGCCCAGATTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VWDVVTFISGNVQTLSAVIVPPV*AQIAES Trigger: GCTTTCAGCAATCTGGGCCCAAACCGGTGGCACAAT...AACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | AGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCTGGGTGGCATTTTATTaGGGAGTGAGCTGCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: SVWDVVTFISGNVQTLSAWVAFY*GVSCQL Trigger: CAGTTGGCAGCTCACTCCTCAATAAAATGCCACCCA...GGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTTCAGTGTTCAAAGTACCTaGCAGGGGCTTGAAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGRSYIHFWQCSDTICRFSVQST*QGLEVV Trigger: CACCACTTCAAGCCCCTGGCAGGTACTTTGAACACT...GAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TTCAAGGGATTCAAAGCATTCTGTTTGGTCAACTCACTCATGATTCATCACGGTAGTGTTGTACCCGGATaGCCGACTGGATTGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: FKGFKAFCLVNSLMIHHGSVVPG*PTGLQC Trigger: ACACTGCAATCCAGTCGGCCATCCGGGTACAACACT...ACCGTGATGAATCATGAGTGAGTTGACCAAACAGAATGCTTTGAATCCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | CTCAAGTACACGGTGGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATCGTGTACATCTGTGTTaGATAGATGCCATTGTCATA | + |
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Preference number: 4 (lower is better) Translates to: LKYTVGHSSSRDSRDSKHRVHLC*IDAIVI Trigger: TATGACAATGGCATCTATTCAACACAGATGTACACG...ATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | TTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGGTCACAAGTCTTGTTGAATTGTaGCAGTCTCCGCAGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLSCYPVITLHSSTRWVTSLVEL*QSPQQL Trigger: AAGCTGCTGCGGAGACTGTCACAATTCAACAAGACT...TGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | ACAAGCTGTCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATCTCTCTTGGTGGGCATaGAGTCTTTTCTGTAAAATC | + |
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Preference number: 4 (lower is better) Translates to: TSCPRREAAFSQRTGDCNLSWWA*SLFCKI Trigger: GATTTTACAGAAAAGACTGCATGCCCACCAAGAGAG...ATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGACAGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTTCGGTCACATTGTGGATTaGTTCATCCAAGCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LGRSYIHFWQCSDTICRFGHIVD*FIQAGE Trigger: CTCTCCTGCTTGGATGAAGCAATCCACAATGTGACC...GAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | ACAAGCTGTCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATTACCAATCGGTGATGTaGACAAGTTCCTTACATACC | + |
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Preference number: 4 (lower is better) Translates to: TSCPRREAAFSQRTGDCNYQSVM*TSSLHT Trigger: GGTATGTAAGGAACTTGTGCACATCACCGATTGGTA...ATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGACAGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGGTCACAAAGATAAAAATGAGATaGGGCTGGGAGGTGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLSCYPVITLHSSTRWVTKIKMR*GWEVPA Trigger: AGCAGGCACCTCCCAGCCCCATCTCATTTTTATCTT...TGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TACACGGTGGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATTCTGTTGGTAGACAGTTGGGTTaGGTAGGTCTAATGATAGAA | + |
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Preference number: 4 (lower is better) Translates to: YTVGHSSSRDSRDSKHSVGRQLG*VGLMIE Trigger: TTCTATCATTAGACCTACCCAACCCAACTGTCTACC...AACAGAATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | AAGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCGCCAGGGTCACATTGTaGATTGCTTCATCCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KCLGRSYIHFWQCSDTICARVTL*IASSKQ Trigger: CTGCTTGGATGAAGCAATCCACAATGTGACCCTGGC...GCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCATACTTCCTCCTGCTGTaGGCTGCCCACCATTATCTG | + |
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Preference number: 4 (lower is better) Translates to: SDGIKSHLFIMLPCNYPAYFLLL*AAHHYL Trigger: CAGATAATGGTGGGCAGCCCACAGCAGGAGGAAGTA...TGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCATGCCTGGATACCTGCTaGATAGGTCCACCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SDGIKSHLFIMLPCNYPACLDTC*IGPPSH Trigger: ATGAGAGGGTGGACCTATCCAGCAGGTATCCAGGCA...TGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| 3UTR CAA 72 bp | GAGGCGGTTGGCCGAGGTATTTCTGAGCCAATTTCTTaGAATTACCTAGAAACCAGGCAGTCTAAGTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: EAVGRGISEPIS*NYLETRQSKFN Trigger: GTTAAACTTAGACTGCCTGGTTTCTAGGTAATTCAAAGAAATTGGCTCAGAAATACCTCGGCCAACCGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | CACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATACAAAATAGATTGGGTACCAATCGGTaGTGTGCACAAGTTCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: HEEKQLFLREQETAIQNRLGTNR*CAQVPY Trigger: GTAAGGAACTTGTGCACATCACCGATTGGTACCCAA...TCTATTTTGTATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | TCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCAAGCCAGGATTGCCTGTaGGCAGTTTCCAGTGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SDGIKSHLFIMLPCNYPASQDCL*AVSSVV Trigger: TACAACACTGGAAACTGCTCACAGGCAATCCTGGCT...TGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCGTGGCTAAGATTTGCTaGACTCTCTGCGTGTACATC | + |
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Preference number: 4 (lower is better) Translates to: KCLGRSYIHFWQCSDTICVAKIC*TLCVYI Trigger: GATGTACACGCAGAGAGTGCAGCAAATCTTAGCCAC...GCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGGTCACACAAATCCTCTCTTGGTaGGCATGCAGTCTTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FLSCYPVITLHSSTRWVTQILSW*ACSLFC Trigger: ACAGAAAAGACTGCATGCCCACCAAGAGAGGATTTG...TGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TCCACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATACAAAATAGGTTTTGTGGGATCATaGGTGGCTAAGATTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: STKRSSFFSENRRLQYKIGFVGS*VAKICC Trigger: GCAGCAAATCTTAGCCACCCATGATCCCACAAAACC...TATTTTGTATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | AGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGAAGACCTTCGCTTATaGTCTCCCAGATATCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFIMLPCNYPALKYTVEDLRL*SPRYRI Trigger: GATACGATATCTGGGAGACCATAAGCGAAGGTCTTC...CACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | AGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGCTGCCCACCATTATCTaGGGAGTAAATGATAATGCT | + |
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Preference number: 4 (lower is better) Translates to: SHLFIMLPCNYPALKYTVLPTII*GVNDNA Trigger: AGCATTATCATTTACTCCTCAGATAATGGTGGGCAG...CACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | ATTTCTGAGCCAATTTCTTTGAATTACCTAGAAACCAGGCAGTCTAAGTTTAACGCAGCTTCTTCACGATaGCTGGATACCTGCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: ISEPISLNYLETRQSKFNAASSR*LDTCWI Trigger: TATCCAGCAGGTATCCAGGCATCGTGAAGAAGCTGC...GTTAAACTTAGACTGCCTGGTTTCTAGGTAATTCAAAGAAATTGGCTCAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | TTCAAGGGATTCAAAGCATTCTGTTTGGTCAACTCACTCATGATTCATCACGGTTATCAAATCCTCTCTTaGTGGGCATGCAGTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKGFKAFCLVNSLMIHHGYQILS*WACSLF Trigger: GAAAAGACTGCATGCCCACCAAGAGAGGATTTGATA...ACCGTGATGAATCATGAGTGAGTTGACCAAACAGAATGCTTTGAATCCCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | AGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCAAAATAGAGGTTTTGTaGGATCATGGGTGGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVWDVVTFISGNVQTLSAKIEVL*DHGWLR Trigger: TCTTAGCCACCCATGATCCCACAAAACCTCTATTTT...GGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | CACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATACAAAATAGATCGCCTTGGTGTAAATaGGGTCAATGTTGTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HEEKQLFLREQETAIQNRSPWCK*GQCCAK Trigger: TTTTGCACAACATTGACCCCATTTACACCAAGGCGA...TCTATTTTGTATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR TCA 90 bp | TTCAAGGGATTCAAAGCATTCTGTTTGGTCAACTCACTCATGATTCATCACGGTTCGTATCCATCTAGCTaGATGTCTTCATCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKGFKAFCLVNSLMIHHGSYPSS*MSSSIC Trigger: ACAGATTGATGAAGACATTCAGCTAGATGGATACGA...ACCGTGATGAATCATGAGTGAGTTGACCAAACAGAATGCTTTGAATCCCTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCTCTGTGTTGAATAGATaGCATTGTCATAGTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLGRSYIHFWQCSDTICSVLNR*HCHSPK Trigger: CTTGGGACTATGACAATGGCATCTATTCAACACAGA...GCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR GCA 90 bp | TCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCAATTTGCTGCACTCTCTaGGTGTACATCTGTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDGIKSHLFIMLPCNYPAICCTL*VYICVE Trigger: TTCAACACAGATGTACACGCAGAGAGTGCAGCAAAT...TGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CCA 90 bp | ATTTCTGAGCCAATTTCTTTGAATTACCTAGAAACCAGGCAGTCTAAGTTTAACTTGTGGGATCATGGGTaGCTAAGATTTGCTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ISEPISLNYLETRQSKFNLWDHG*LRFAAL Trigger: GAGTGCAGCAAATCTTAGCCACCCATGATCCCACAA...GTTAAACTTAGACTGCCTGGTTTCTAGGTAATTCAAAGAAATTGGCTCAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | GTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCCGAGGTATTAGGGCCAGGGTCACATaGTGGATTGCTTCATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGTEQCENKPEAVGRGIRARVT*WIASSK Trigger: CTTGGATGAAGCAATCCACAATGTGACCCTGGCCCT...AATACCTCGGCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | GGTAGTTTTGTCCATGTGGTAGCCAGGTACCAGAAGTCTCTGGCACAGAGCAATCCGTTGAGCCTAGGGTaGCTTCTGGGATCCTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFVHVVARYQKSLAQSNPLSLG*LLGSFG Trigger: CCCGAAGGATCCCAGAAGCAACCCTAGGCTCAACGG...ATTGCTCTGTGCCAGAGACTTCTGGTACCTGGCTACCACATGGACAAAACTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | GTCTCTGGCACAGAGCAATGTGAAAACAAGCCCGAGGCGGTTGGCCGAGGTATTAAAAGCCAGATACTCTaGCCAGTTGACAAGGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: VSGTEQCENKPEAVGRGIKSQIL*PVDKVI Trigger: GATTACCTTGTCAACTGGCAAGAGTATCTGGCTTTT...AATACCTCGGCCAACCGCCTCGGGCTTGTTTTCACATTGCTCTGTGCCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | TTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTTCCCCCAGACTCCTCCGTaGAGCCTAGGGTTGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGRSYIHFWQCSDTICRFPQTPP*SLGLLL Trigger: CAGAAGCAACCCTAGGCTCAACGGAGGAGTCTGGGG...GAAACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS GCA 90 bp | CAGGGTCACATTGTGGATTGCTTCATCCAAGCAGGAGAGCATGGCTaGGTACCTCCTCCTGTTTATGTTGATAATGGATCTGTAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGHIVDCFIQAGEHG*VPPPVYVDNGSVVF Trigger: GAACACTACAGATCCATTATCAACATAAACAGGAGGAGGTACGCAGCCATGCTCTCCTGCTTGGATGAAGCAATCCACAATGTGACCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | CTCAAGTACACGGTGGGTCACAGTTCCTCTCGTGATTCAAGGGATTCAAAGCATGGATCAGCCGTGATGTaGAAAAGCCAGATACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKYTVGHSSSRDSRDSKHGSAVM*KSQILL Trigger: CAAGAGTATCTGGCTTTTCAACATCACGGCTGATCC...ATGCTTTGAATCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | TTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGGTCACATCCCAATATGTTCCTTaGCTGCCTCTGAGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLSCYPVITLHSSTRWVTSQYVP*LPLSGQ Trigger: CTGGCCACTCAGAGGCAGCAAAGGAACATATTGGGA...TGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | AGTCATCTTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGGATGGCCGACTGGATaGCAGTGTTCCAGATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHLFIMLPCNYPALKYTVGWPTG*QCSRSH Trigger: ATGGGATCTGGAACACTGCAATCCAGTCGGCCATCC...CACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAAGATGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | GTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTAAGGTAATCCTTTCATaGTGCCACCGGTTTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VWDVVTFISGNVQTLSAVKVILS*CHRFGP Trigger: GGGCCCAAACCGGTGGCACAATGAAAGGATTACCTT...AACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | TTCAAGGGATTCAAAGCATTCTGTTTGGTCAACTCACTCATGATTCATCACGGTGCTTCTGAGGTAGGGTaGCATTGTCCAGAGGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FKGFKAFCLVNSLMIHHGASEVG*HCPEVD Trigger: GTCTACCTCTGGACAATGCAACCCTACCTCAGAAGC...ACCGTGATGAATCATGAGTGAGTTGACCAAACAGAATGCTTTGAATCCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS TCA 90 bp | CGAAGACCTTCGCTTATGGTCTCCCAGATATCGTATCCATCTAGCTaGATGTCTTCATCAATCTGTCCTTCAGCCAGTGAAATCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRPSLMVSQISYPSS*MSSSICPSASEIKV Trigger: AACCTTGATTTCACTGGCTGAAGGACAGATTGATGAAGACATTCAGCTAGATGGATACGATATCTGGGAGACCATAAGCGAAGGTCTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CCA 90 bp | TGTTGTGCAAAATATCCACTCGGGGTGAACGAAGACCTTCGCTTATaGTCTCCCAGATATCGTATCCATCTAGCTGAATGTCTTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CCAKYPLGVNEDLRL*SPRYRIHLAECLHQ Trigger: TTGATGAAGACATTCAGCTAGATGGATACGATATCTGGGAGACCATAAGCGAAGGTCTTCGTTCACCCCGAGTGGATATTTTGCACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | AAGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCACAGGCACGGCAGTCTaGTTGAATTGTGACAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KCLGRSYIHFWQCSDTICTGTAV*LNCDSL Trigger: GAGACTGTCACAATTCAACAAGACTGCCGTGCCTGT...GCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | CACGAAGAGAAGCAGCTTTTTCTCAGAGAACAGGAGACTGCAATACAAAATAGAAGCCAGTGGCAACACTaGGGTGGCATTTTATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HEEKQLFLREQETAIQNRSQWQH*GGILLR Trigger: CCTCAATAAAATGCCACCCAAGTGTTGCCACTGGCT...TCTATTTTGTATTGCAGTCTCCTGTTCTCTGAGAAAAAGCTGCTTCTCTTCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS GCA 90 bp | CTAAGATTTGCTGCACTCTCTGCGTGTACATCTGTGTTGAATAGATaGCATTGTCATAGTCCCAAGCTGCATTGTCGTTTTCGTACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRFAALSACTSVLNR*HCHSPKLHCRFRTS Trigger: ACTTGTACGAAAACGACAATGCAGCTTGGGACTATGACAATGGCATCTATTCAACACAGATGTACACGCAGAGAGTGCAGCAAATCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | AGTGTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTATCAAATCCTCTCTaGGTGGGCATGCAGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVWDVVTFISGNVQTLSAVSNPL*VGMQSF Trigger: AAAAGACTGCATGCCCACCAAGAGAGGATTTGATAC...GGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CCA 90 bp | CTTGGTAAGCCACATATAAAAATAGAGGTTTTGTGGGATCATGGGTaGCTAAGATTTGCTGCACTCTCTGCGTGTACATCTGTGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGKPHIKIEVLWDHG*LRFAALSACTSVLN Trigger: ATTCAACACAGATGTACACGCAGAGAGTGCAGCAAATCTTAGCCACCCATGATCCCACAAAACCTCTATTTTTATATGTGGCTTACCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | TTTTTATCATGTTACCCTGTAATTACCCTGCACTCAAGTACACGGTGGGTCACAGCGTGTACATCTGTGTaGAATAGATGCCATTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSCYPVITLHSSTRWVTACTSV*NRCHCH Trigger: ATGACAATGGCATCTATTCAACACAGATGTACACGC...TGTGACCCACCGTGTACTTGAGTGCAGGGTAATTACAGGGTAACATGATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | GTTTGGGACGTAGTTACATTCATTTCTGGCAATGTTCAGACACTATCTGCCGTTATAAAAATAGAGGTTTaGTGGGATCATGGGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VWDVVTFISGNVQTLSAVIKIEV*WDHGWL Trigger: TAGCCACCCATGATCCCACAAAACCTCTATTTTTAT...AACGGCAGATAGTGTCTGAACATTGCCAGAAATGAATGTAACTACGTCCCAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS-3UTR CAA 90 bp | GATACAACCTCTGACGGCATCAAAAGTCATCTTTTTATCATGTTACCCTGTAATTTGGGTGGCATTTTATaGAGGAGTGAGCTGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: DTTSDGIKSHLFIMLPCNLGGIL*RSELPT Trigger: AGTTGGCAGCTCACTCCTCAATAAAATGCCACCCAA...ATTACAGGGTAACATGATAAAAAGATGACTTTTGATGCCGTCAGAGGTTGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS GCA 72 bp | GTCTCCGCAGCAGCTTCTTCACGATGCCTGGATACCTaGTGGATAGGTCCACCCTCTCATACGGATCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSAAASSRCLDT*WIGPPSHTDQP Trigger: CGGCTGATCCGTATGAGAGGGTGGACCTATCCAGCAGGTATCCAGGCATCGTGAAGAAGCTGCTGCGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS GCA 72 bp | CAGTTTCCAGTGTTGTACCCGGATGGCCGACTGGATTaGAGTGTTCCAGATCCCATAGCCTGCTGCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QFPVLYPDGRLD*SVPDPIACCPG Trigger: TCCTGGGCAGCAGGCTATGGGATCTGGAACACTGCAATCCAGTCGGCCATCCGGGTACAACACTGGAAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CAA 72 bp | ACTGTAGCCAGGATTGCCTGTGAGCAGTTTCCAGTGTaGTACCCGGATGGCCGACTGGATTGCAGTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVARIACEQFPV*YPDGRLDCSVP Trigger: TGGAACACTGCAATCCAGTCGGCCATCCGGGTACAACACTGGAAACTGCTCACAGGCAATCCTGGCTACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CAA 90 bp | TGTTATAGAAACCATACCTCTTTAGGGCCAGGGTCACATTGTGGATaGCTTCATCCAAGCAGGAGAGCATGGCTGCGTACCTCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CYRNHTSLGPGSHCG*LHPSRRAWLRTSSC Trigger: ACAGGAGGAGGTACGCAGCCATGCTCTCCTGCTTGGATGAAGCAATCCACAATGTGACCCTGGCCCTAAAGAGGTATGGTTTCTATAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CAA 72 bp | CAGATACTCTTGCCAGTTGACAAGGTAATCCTTTCATaGTGCCACCGGTTTGGGCCCAGATTGCTGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QILLPVDKVILS*CHRFGPRLLKA Trigger: GGCTTTCAGCAATCTGGGCCCAAACCGGTGGCACAATGAAAGGATTACCTTGTCAACTGGCAAGAGTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CAA 90 bp | GTGGTGAGTGGACAGCTTGGTAAGCCACATATAAAAATAGAGGTTTaGTGGGATCATGGGTGGCTAAGATTTGCTGCACTCTCTGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VVSGQLGKPHIKIEV*WDHGWLRFAALSAC Trigger: ACACGCAGAGAGTGCAGCAAATCTTAGCCACCCATGATCCCACAAAACCTCTATTTTTATATGTGGCTTACCAAGCTGTCCACTCACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS TCA 72 bp | CTTCAGCCAGTGAAATCAAGGTTGGGTACCAATCGGTaGTGTGCACAAGTTCCTTACATACCGTTCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LQPVKSRLGTNR*CAQVPYIPFPC Trigger: ACAAGGGAACGGTATGTAAGGAACTTGTGCACATCACCGATTGGTACCCAACCTTGATTTCACTGGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CAA 90 bp | CATGGGTGGCTAAGATTTGCTGCACTCTCTGCGTGTACATCTGTGTaGAATAGATGCCATTGTCATAGTCCCAAGCTGCATTGTCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HGWLRFAALSACTSV*NRCHCHSPKLHCRF Trigger: AAAACGACAATGCAGCTTGGGACTATGACAATGGCATCTATTCAACACAGATGTACACGCAGAGAGTGCAGCAAATCTTAGCCACCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS GCA 72 bp | GCTGCACTCTCTGCGTGTACATCTGTGTTGAATAGATaGCATTGTCATAGTCCCAAGCTGCATTGTCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AALSACTSVLNR*HCHSPKLHCRF Trigger: AAAACGACAATGCAGCTTGGGACTATGACAATGGCATCTATTCAACACAGATGTACACGCAGAGAGTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS CCA 72 bp | AAATATCCACTCGGGGTGAACGAAGACCTTCGCTTATaGTCTCCCAGATATCGTATCCATCTAGCTGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: KYPLGVNEDLRL*SPRYRIHLAEC Trigger: ACATTCAGCTAGATGGATACGATATCTGGGAGACCATAAGCGAAGGTCTTCGTTCACCCCGAGTGGATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS TCA 72 bp | TCGCTTATGGTCTCCCAGATATCGTATCCATCTAGCTaGATGTCTTCATCAATCTGTCCTTCAGCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLMVSQISYPSS*MSSSICPSASE Trigger: TTCACTGGCTGAAGGACAGATTGATGAAGACATTCAGCTAGATGGATACGATATCTGGGAGACCATAAGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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| CDS TCA 72 bp | GTTACTTCCTCCTGCTGTGGGCTGCCCACCATTATCTaGGGAGTAAATGATAATGCTATTGTTATAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: VTSSCCGLPTII*GVNDNAIVIET Trigger: GGTTTCTATAACAATAGCATTATCATTTACTCCTCAGATAATGGTGGGCAGCCCACAGCAGGAGGAAGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093976.4 |
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