Pregenerated sensors for ARSI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036412Ensembl transcript IDs: ENSMUST00000040359.6
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATTCAGCTGAGGGCTTCTGTGCCCTCCCTCCACGTGCCTACAGATaGAGACTTGACCTTGCCTCCTCCCTGAGAACCAGCAAAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: YSAEGFCALPPRAYR*RLDLASSLRTSKGR Trigger: TCTCCCTTTGCTGGTTCTCAGGGAGGAGGCAAGGTCAAGTCTTCATCTGTAGGCACGTGGAGGGAGGGCACAGAAGCCCTCAGCTGAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 90 bp | AACCTGAGGGCAAAAAGGAAACTCATCAGGAAAGAGGCAGGATTGTaGCCCAGGCAACCCAGCCTGGTTGCTGCCCTTCCCCAAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: NLRAKRKLIRKEAGL*PRQPSLVAALPQVP Trigger: TGGGACTTGGGGAAGGGCAGCAACCAGGCTGGGTTGCCTGGGTCACAATCCTGCCTCTTTCCTGATGAGTTTCCTTTTTGCCCTCAGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 90 bp | GAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTaGAAGGTGACAAGGTCAGCAAGAAACCCTGCCATGGCCCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: EHHRELERGSWTQVV*KVTRSARNPAMAPD Trigger: GTCTGGGGCCATGGCAGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 90 bp | ACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTGGAAGGTaGCAAGGTCAGCAAGAAACCCTGCCATGGCCCCAGACACATGTG | + |
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Preference number: 1 (lower is better) Translates to: TESWKEGHGLKLSGR*QGQQETLPWPQTHV Trigger: CACATGTGTCTGGGGCCATGGCAGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 90 bp | ATTGAGTTGTTCAACAGAGCAGCAGCCAGCTGGCCATACTCCAGCTaGTATCCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGAC | + |
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Preference number: 1 (lower is better) Translates to: IELFNRAAASWPYSS*YPRAPQRAGKRVMD Trigger: GTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGGATATCAGCTGGAGTATGGCCAGCTGGCTGCTGCTCTGTTGAACAACTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 90 bp | CTCCACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTaGGGTAGGCAGAGCCAAGGCTCATATTTCCCTACTCCTTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: LHNHQPGQFSTAPAT*GRQSQGSYFPTPLQ Trigger: TTGCAAAGGAGTAGGGAAATATGAGCCTTGGCTCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 90 bp | AGGTCAGCAAGAAACCCTGCCATGGCCCCAGACACATGTGTACACTaGAGTCCTAAAGTCACCAGAGCTCATCTTAGGGGTGAGATTGAG | + |
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Preference number: 1 (lower is better) Translates to: RSARNPAMAPDTCVH*SPKVTRAHLRGEIE Trigger: CTCAATCTCACCCCTAAGATGAGCTCTGGTGACTTTAGGACTCCAGTGTACACATGTGTCTGGGGCCATGGCAGGGTTTCTTGCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 90 bp | CCAGCTGATATCCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATaGACTCAAGTTGTCTGGAAGGTGACAAGGTCAGCAAGAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: PADIQEHHRELERGS*TQVVWKVTRSARNP Trigger: AGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGGATATCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CAA 90 bp | TCATCAGGAAAGAGGCAGGATTGTGACCCAGGCAACCCAGCCTGGTaGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SSGKRQDCDPGNPAW*LPFPKSHPIQLRAS Trigger: AGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACCAGGCTGGGTTGCCTGGGTCACAATCCTGCCTCTTTCCTGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCCTCCCTACAGATGAAGACTTaGCCTTGCCTCCTCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LLPFPKSHPIQLRASVPSLQMKT*PCLLPE Trigger: CTCAGGGAGGAGGCAAGGTCAAGTCTTCATCTGTAG...GGAGGGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCAAAGAGGCAGGATTGTaGCCCAGGCAACCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QRLLSQLLPPPSLYSGSGKEAGL*PRQPSL Trigger: CAGGCTGGGTTGCCTGGGTCACAATCCTGCCTCTTT...GCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCCAAAGGGAGAGTGTCTaGGGGGAACTGAGATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QRLLSQLLPPPSLYSGSGQRESV*GELRFP Trigger: AGGGAATCTCAGTTCCCCTCAGACACTCTCCCTTTG...GCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCATGGCCATACTCCAGCTaGTATCCAAGAGCACCACAG | + |
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Preference number: 2 (lower is better) Translates to: RLLSQLLPPPSLYSGSGSWPYSS*YPRAPQ Trigger: CTGTGGTGCTCTTGGATATCAGCTGGAGTATGGCCA...TGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCCAAGAAACCCTGCCATaGCCCCAGACACATGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: QRLLSQLLPPPSLYSGSGQETLP*PQTHVY Trigger: GTACACATGTGTCTGGGGCCATGGCAGGGTTTCTTG...GCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAGGCTCATATTTCCCTACTCCTTTGCAAGTAGGGAAATCAAGGCCCTGTCCAGGCAACCCAGCCTaGTTGCTGCCCTTCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SQGSYFPTPLQVGKSRPCPGNPA*LLPFPK Trigger: CTTGGGGAAGGGCAGCAACCAGGCTGGGTTGCCTGG...ACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGGAAATATGAGCCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTAGCACCACAGAGAGCTaGAAAGAGGGTCATGGACTC | + |
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Preference number: 2 (lower is better) Translates to: KGSFHSCFPHPHYTVAQASTTES*KEGHGL Trigger: GAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCT...AGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTTGGACTCAAGTTGTCTaGAAGGTGACAAGGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KGSFHSCFPHPHYTVAQAWTQVV*KVTRSA Trigger: TGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCA...AGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGGCTCATATTTCCCTACTCCTTTGCAAGTAGGGAAATCAAGGCCCTGTCCACGTGCCTACAGATaGAGACTTGACCTTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQGSYFPTPLQVGKSRPCPRAYR*RLDLAS Trigger: GGAGGCAAGGTCAAGTCTTCATCTGTAGGCACGTGG...ACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGGAAATATGAGCCTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTGAGGTAGGCAGAAAGTTGTCTGGAAGGTaGCAAGGTCAGCAAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: TTISLASFLQHQQREVGRKLSGR*QGQQET Trigger: GGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTT...TCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTGAGGTAGGCAGATGTCCGTTCTCTCATTaGGTTGTTCAACAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TTISLASFLQHQQREVGRCPFSH*VVQQSS Trigger: GCTGCTCTGTTGAACAACTCAATGAGAGAACGGACA...TCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAGGCTCATATTTCCCTACTCCTTTGCAAGTAGGGAAATCAAGGCCCTGTGGCTCCTTTCACAGCTaGTTCCCCCACCCTCACTAT | + |
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Preference number: 2 (lower is better) Translates to: SQGSYFPTPLQVGKSRPCGSFHS*FPHPHY Trigger: ATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCC...ACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGGAAATATGAGCCTTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAGGCTCATATTTCCCTACTCCTTTGCAAGTAGGGAAATCAAGGCCCTGTCTGGAAAGAGGGTCATaGACTCAAGTTGTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SQGSYFPTPLQVGKSRPCLERGS*TQVVWK Trigger: CTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAG...ACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGGAAATATGAGCCTTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 72 bp | GGTTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTaGGGGCTTCTGTGCCCTCCCTCCACGTGCCTACAG | + |
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Preference number: 3 (lower is better) Translates to: GCCPSPSPTLFS*GLLCPPSTCLQ Trigger: CTGTAGGCACGTGGAGGGAGGGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 72 bp | GGAAAGAGGCAGGATTGTGACCCAGGCAACCCAGCCTaGTTGCTGCCCTTCCCCAAGTCCCACCCTATTCAG | + |
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Preference number: 3 (lower is better) Translates to: GKRQDCDPGNPA*LLPFPKSHPIQ Trigger: CTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACCAGGCTGGGTTGCCTGGGTCACAATCCTGCCTCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 72 bp | CTGTGCCCTCCCTCCACGTGCCTACAGATGAAGACTTaGCCTTGCCTCCTCCCTGAGAACCAGCAAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LCPPSTCLQMKT*PCLLPENQQRE Trigger: CTCCCTTTGCTGGTTCTCAGGGAGGAGGCAAGGTCAAGTCTTCATCTGTAGGCACGTGGAGGGAGGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 72 bp | GTGCCTACAGATGAAGACTTGACCTTGCCTCCTCCCTaGGAACCAGCAAAGGGAGAGTGTCTGAGGGGAACT | + |
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Preference number: 3 (lower is better) Translates to: VPTDEDLTLPPP*EPAKGECLRGT Trigger: AGTTCCCCTCAGACACTCTCCCTTTGCTGGTTCTCAGGGAGGAGGCAAGGTCAAGTCTTCATCTGTAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 72 bp | TGGAAAGAGGGTCATGGACTCAAGTTGTCTGGAAGGTaGCAAGGTCAGCAAGAAACCCTGCCATGGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: WKEGHGLKLSGR*QGQQETLPWPQ Trigger: CTGGGGCCATGGCAGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR GCA 72 bp | AGTTGTCTGGAAGGTGACAAGGTCAGCAAGAAACCCTaGCATGGCCCCAGACACATGTGTACACTGGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: SCLEGDKVSKKP*HGPRHMCTLES Trigger: GGACTCCAGTGTACACATGTGTCTGGGGCCATGGCAGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR TCA 72 bp | CATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTaGGGTAGGCAGAGCCAAGGCTCATATTTCCCTACT | + |
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Preference number: 3 (lower is better) Translates to: HQPGQFSTAPAT*GRQSQGSYFPT Trigger: AGTAGGGAAATATGAGCCTTGGCTCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 72 bp | AGAAACCCTGCCATGGCCCCAGACACATGTGTACACTaGAGTCCTAAAGTCACCAGAGCTCATCTTAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: RNPAMAPDTCVH*SPKVTRAHLRG Trigger: ACCCCTAAGATGAGCTCTGGTGACTTTAGGACTCCAGTGTACACATGTGTCTGGGGCCATGGCAGGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR GCA 72 bp | TGTGTTCAAGACCAAATCAAAGGCTCCTTTCACAGCTaGTTCCCCCACCCTCACTATACAGTGGCTCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: CVQDQIKGSFHS*FPHPHYTVAQA Trigger: AGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTGATTTGGTCTTGAACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 72 bp | AGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTaGAAGGTGACAAGGTCAGCAAGAAACCCTGCCATG | + |
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Preference number: 3 (lower is better) Translates to: RELERGSWTQVV*KVTRSARNPAM Trigger: CATGGCAGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 72 bp | ATACTCCAGCTGATATCCAAGAGCACCACAGAGAGCTaGAAAGAGGGTCATGGACTCAAGTTGTCTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ILQLISKSTTES*KEGHGLKLSGR Trigger: CCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGGATATCAGCTGGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CCA 72 bp | CCCTACTCCTTTGCAAGTAGGGAAATCAAGGCCCTGTaGGGAAGAACTGTGTTCAAGACCAAATCAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PYSFASREIKAL*GRTVFKTKSKA Trigger: AGCCTTTGATTTGGTCTTGAACACAGTTCTTCCCCACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | CCCAGGCAACCCAGCCTGGTTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTTGCGCCGTGCTACGTTaGCCATCGTGCGGTAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PRQPSLVAALPQVPPYSACAVLR*PSCGSG Trigger: ACCGCTACCGCACGATGGGCAACGTAGCACGGCGCA...AGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACCAGGCTGGGTTGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | CTGGTTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCCCAGGTTCCACCAGCTaGCAGGGAAGGAGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LVAALPQVPPYSAEGFCAPGSTS*QGRRPV Trigger: CACTGGCCTCCTTCCCTGGCAGCTGGTGGAACCTGG...GGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CTGGTTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCGTGTGGAGGCTGCGGTaGAGCCACCGAAGGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: LVAALPQVPPYSAEGFCAVWRLR*SHRRLI Trigger: GATCAGCCTTCGGTGGCTCCACCGCAGCCTCCACAC...GGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCCTCCCTCACTACATCGGGTCGCTaGCCAGCCAGGTCCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: LPFPKSHPIQLRASVPSLTTSGR*PARSSR Trigger: ACGAGAGGACCTGGCTGGCCAGCGACCCGATGTAGT...GAGGGAGGGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | AAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTTGGAGTACTGGCCGCTaGGCCCCCAGGCCACGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KGSFHSCFPHPHYTVAQAWSTGR*APRPRS Trigger: AGAGCGTGGCCTGGGGGCTCAGCGGCCAGTACTCCA...AGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | TTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCCTCCGCAGGTCACCATGGCTaGGTACTTGCGCCGTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LLPFPKSHPIQLRASVPSAGHHG*VLAPCY Trigger: GTAGCACGGCGCAAGTACGCAGCCATGGTGACCTGC...GGAGGGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCCTCCCTCCACGTGCCCCAGTCACCATAGCCTaGGTCTCCAGTGAGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PQVPPYSAEGFCALPPRAPVTIA*VSSEQL Trigger: AAGCTGCTCACTGGAGACCCAGGCTATGGTGACTGG...GGCACGTGGAGGGAGGGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCCTTCCTCCTCCTCACTaGCCCAGGGCCCCCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QRLLSQLLPPPSLYSGSGLPPPH*PRAPKH Trigger: GTGCTTGGGGGCCCTGGGCCAGTGAGGAGGAGGAAG...GCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCCTCCCTCACGTCGTGGTACCCTTaGTCGTCGGTGAGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: LPFPKSHPIQLRASVPSLTSWYP*SSVRMK Trigger: CTTCATCCTCACCGACGACCAAGGGTACCACGACGT...GAGGGAGGGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | GCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCAGCCCATGCAGGTCACCATaGCTGCGTACTTGCGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: APFTAASPTLTIQWLRLSPCRSP*LRTCAV Trigger: CACGGCGCAAGTACGCAGCCATGGTGACCTGCATGG...GCTGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | TCCACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTGAGGTAGGCCAGCCTGGCGGATGCTaGCCATCCGCTCCAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: STTISLASFLQHQQREVGQPGGC*PSAPGS Trigger: GGAACCTGGAGCGGATGGCCAGCATCCGCCAGGCTG...GCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGGCACAGCCTCGTCCATaGAGGTCACCATGGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: SKAPFTAASPTLTIQWLRAQPRP*RSPWLR Trigger: ACGCAGCCATGGTGACCTGCATGGACGAGGCTGTGC...CCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCATCTGGGGATTGTGGCTaGCCAGGATGTGGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RLLSQLLPPPSLYSGSGSSGDCG*PGCGLH Trigger: GTGCAAGCCACATCCTGGCCAGCCACAATCCCCAGA...TGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCGAAGGGGCCAGTTaGTACCCCCTGAGAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SKAPFTAASPTLTIQWLRLEGAS*YPLRRS Trigger: AGACCTTCTCAGGGGGTAGCAACTGGCCCCTTCGAG...CCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | GCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCAGCTCGATATCCGAGCCATaGTATCCCACGTCGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: APFTAASPTLTIQWLRLSSISEP*YPTSWY Trigger: GTACCACGACGTGGGATACCATGGCTCGGATATCGA...GCTGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | TCAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGACAGTTGGGCTGCCGTaGGCGGATAATGGAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKAPFTAASPTLTIQWLRTVGLP*ADNGVL Trigger: CAGCACTCCATTATCCGCCCACGGCAGCCCAACTGT...CCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | TCCACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTGAGGTAGGCTTGAGCAGTGGGCTGTaGACAAAACCCAGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STTISLASFLQHQQREVGLSSGL*TKPRPL Trigger: GAGGGGCCTGGGTTTTGTCCACAGCCCACTGCTCAA...GCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | AGAAACCCTGCCATGGCCCCAGACACATGTGTACACTGGAGTCCTAAAGTCACCCCAGTTGCTACCCCCTaGGAAGGTCTGGCCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: RNPAMAPDTCVHWSPKVTPVATP*EGLATI Trigger: AATGGTGGCCAGACCTTCTCAGGGGGTAGCAACTGG...GGTGACTTTAGGACTCCAGTGTACACATGTGTCTGGGGCCATGGCAGGGTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | ACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTGAGGTAGGCAGATGGTATCCCACGTCGTaGTACCCTTGGTCGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTISLASFLQHQQREVGRWYPTS*YPWSSV Trigger: CACCGACGACCAAGGGTACCACGACGTGGGATACCA...TCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGGTCATGGACTCAAGTTGTCTGGAAGGTGACAAGGTCAGCAAGAAACCCTGGGGCAGCGTCACCTaGTCCAGGGGCAGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRVMDSSCLEGDKVSKKPWGSVT*SRGRQL Trigger: CAACTGTCTGCCCCTGGACCAGGTGACGCTGCCCCA...GGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | GCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCAGCAAACCCACAAACCCCTaGGCCATCACAGTTGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: APFTAASPTLTIQWLRLSKPTNP*AITVVV Trigger: TACGACAACTGTGATGGCCCAGGGGTTTGTGGGTTT...GCTGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CCAGATGTTGGGGACCAAAAGAGAAGAATTCCACTAGGCTCCCAAGTCATGAGGAGCATAGTGGAGTACTaGCCGCTGAGCCCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDVGDQKRRIPLGSQVMRSIVEY*PLSPQA Trigger: GGCCTGGGGGCTCAGCGGCCAGTACTCCACTATGCT...CCTCATGACTTGGGAGCCTAGTGGAATTCTTCTCTTTTGGTCCCCAACATCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | TCAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGAGAAAGAGGGGATTCTaGGGATTGTGGCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAPFTAASPTLTIQWLRRKRGF*GLWLAR Trigger: CCTGGCCAGCCACAATCCCCAGAATCCCCTCTTTCT...CCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | ACAACCATCAGCCTGGCCAGTTTTCTACAGCACCAGCAACGTGAGGTAGGCAGACCCCCTGAGAAGGTCTaGCCACCATTGTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTISLASFLQHQQREVGRPPEKV*PPLSLE Trigger: CTCCAGTGACAATGGTGGCCAGACCTTCTCAGGGGG...TCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACTGGCCAGGCTGATGGTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | GGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCAGCAGACCCACCAGTGTTaGGTACCAGTCTGTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: GSFHSCFPHPHYTVAQAQQTHQC*VPVCDM Trigger: CATATCACAGACTGGTACCCAACACTGGTGGGTCTG...CTGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | GGCCCTGTGGGGAAGAACTGTGTTCAAGACCAAATCAAAGGCTCCTTTCACAGCTTGGGTACCAGTCTGTaGTATGGACCAGGGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGKNCVQDQIKGSFHSLGTSL*YGPGPD Trigger: GTCGGGCCCTGGTCCATATCACAGACTGGTACCCAA...GCTGTGAAAGGAGCCTTTGATTTGGTCTTGAACACAGTTCTTCCCCACAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | TCAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGTCCGTCTCTTTTTCTTaGGCAGTGGGCTGTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SKAPFTAASPTLTIQWLRSVSFS*AVGCGQ Trigger: TTGTCCACAGCCCACTGCTCAAGAAAAAGAGACGGA...CCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | ATATCCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTTGTGTAGGATCTCTGTaGGTGGTGAGGCCCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTTESWKEGHGLKLSCVGSL*VVRPGP Trigger: AGGGCCGGGCCTCACCACGCACAGAGATCCTACACA...AGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | GGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCAGGAAGCTTGCAAATCTTaGATTTCTTCTTGCGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSFHSCFPHPHYTVAQAQEACKS*ISSCGD Trigger: GTCGCCGCAAGAAGAAATGCAAGATTTGCAAGCTTC...CTGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CCAGATGTTGGGGACCAAAAGAGAAGAATTCCACTAGGCTCCCAAGTCATGAGGTGCCCACCATGTGGGTaGAGTAGCCTGCCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDVGDQKRRIPLGSQVMRCPPCG*SSLPPV Trigger: TACAGGAGGCAGGCTACTCCACCCACATGGTGGGCA...CCTCATGACTTGGGAGCCTAGTGGAATTCTTCTCTTTTGGTCCCCAACATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTGGAAGGATTCTGGGGATTGTaGCTGGCCAGGATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAPQRAGKRVMDSSCLEGFWGL*LARMWL Trigger: AAGCCACATCCTGGCCAGCCACAATCCCCAGAATCC...TTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | AAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTGGAAGGGGCCAGTGTCTGAGGTaGAATCCAGTCACCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSTTESWKEGHGLKLSGRGQCLR*NPVTIA Trigger: GGCTATGGTGACTGGATTCCACCTCAGACACTGGCC...CCTTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | GGCCCTGTGGGGAAGAACTGTGTTCAAGACCAAATCAAAGGCTCCTTTCACAGCAATCCACATTGCCTGTaGGGGAACCCAGGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPVGKNCVQDQIKGSFHSNPHCL*GNPGRC Trigger: ACACCTTCCTGGGTTCCCTCACAGGCAATGTGGATT...GCTGTGAAAGGAGCCTTTGATTTGGTCTTGAACACAGTTCTTCCCCACAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | CAAAAGAGAAGAATTCCACTAGGCTCCCAAGTCATGAGGCTCCAGGAACGTAAAGATCTCTGTGCGTGGTaGGGCCCGGCCCTCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKRRIPLGSQVMRLQERKDLCAW*GPALTN Trigger: ATTAGTGAGGGCCGGGCCTCACCACGCACAGAGATC...TTTACGTTCCTGGAGCCTCATGACTTGGGAGCCTAGTGGAATTCTTCTCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR TCA 90 bp | CAAAAGAGAAGAATTCCACTAGGCTCCCAAGTCATGAGGCTCCAGGAACGTAAAAGCCTGGGTCTCCAGTaGGCAGCTTCCACTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKRRIPLGSQVMRLQERKSLGLQ*AASTPQ Trigger: TTGGGGAGTGGAAGCTGCTCACTGGAGACCCAGGCT...TTTACGTTCCTGGAGCCTCATGACTTGGGAGCCTAGTGGAATTCTTCTCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTGGAATCTTGCATTTCTTCTTaGGGCGACCCCGGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRAPQRAGKRVMDSSCLESCISS*GDPGRN Trigger: GTTTCTCCCGGGGTCGCCGCAAGAAGAAATGCAAGA...TTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CTAGGCTCCCAAGTCATGAGGCTCCAGGAACGTAAAGATTTCTCAGAGCCTACCTGCTGCAATCCTGTATaGATCTGGTACCTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSQVMRLQERKDFSEPTCCNPV*IWYLPV Trigger: CACCGGCAGGTACCAGATCCATACAGGATTGCAGCA...GGTAGGCTCTGAGAAATCTTTACGTTCCTGGAGCCTCATGACTTGGGAGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | CCAGATGTTGGGGACCAAAAGAGAAGAATTCCACTAGGCTCCCAAGTCATGAGGCCATTAAAGTCAGGATaGGCCCGAGGGTTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDVGDQKRRIPLGSQVMRPLKSG*ARGFAA Trigger: AGCTGCGAACCCTCGGGCCCATCCTGACTTTAATGG...CCTCATGACTTGGGAGCCTAGTGGAATTCTTCTCTTTTGGTCCCCAACATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| 3UTR CAA 72 bp | GGTAGGCAGAGCCAAGGCTCATATTTCCCTACTCCTTaGCAAGTAGGGAAATCAAGGCCCTGTGGGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRQSQGSYFPTP*QVGKSRPCGEE Trigger: TTCTTCCCCACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGGAAATATGAGCCTTGGCTCTGCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGGTCATGGACTCAAGTTGTCTGGAAGGTGACAAGGTCAGCAAGAAACCCGCCCTCACTAATGGCTaGCCATACATCATAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KRVMDSSCLEGDKVSKKPALTNG*PYIIAI Trigger: GATGGCTATGATGTATGGCCAGCCATTAGTGAGGGC...GGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGACCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR GCA 90 bp | ATATCCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTACTCGGATAGCAGCCTaGACTGCTGTATTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTTESWKEGHGLKLSTRIAA*TAVFQI Trigger: GATCTGGAATACAGCAGTGCAGGCTGCTATCCGAGT...AGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCTCATCGAAGGTGTACATATaGGCTGGATGTAATAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSQLLPPPSLYSGSGSSKVYI*AGCNNS Trigger: AGAATTATTACATCCAGCCCATATGTACACCTTCGA...TGAGCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | CCCTTGGTCGTCGGTGAGGATGAAGATAATGTGTGGAGGCTGCGGTaGAGCCACCGAAGGCTGATCGCCAGCCTCGGCAGGCCCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVVGEDEDNVWRLR*SHRRLIASLGRPIS Trigger: GCTGATGGGCCTGCCGAGGCTGGCGATCAGCCTTCGGTGGCTCCACCGCAGCCTCCACACATTATCTTCATCCTCACCGACGACCAAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS TCA 90 bp | AGGATGAAGATAATGTGTGGAGGCTGCGGTGGAGCCACCGAAGGCTaGTCGCCAGCCTCGGCAGGCCCATCAGCCACAAGGCCGGGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RMKIMCGGCGGATEG*SPASAGPSATRPGL Trigger: TAAGCCCGGCCTTGTGGCTGATGGGCCTGCCGAGGCTGGCGATCAGCCTTCGGTGGCTCCACCGCAGCCTCCACACATTATCTTCATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | ACACAGCCTGGCGGATGCTGGCCATCCGCTCCAGGTTCCACCAGCTaGCAGGGAAGGAGGCCAGTGTCTGAGGTGGAATCCAGTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQPGGCWPSAPGSTS*QGRRPVSEVESSHH Trigger: ATGGTGACTGGATTCCACCTCAGACACTGGCCTCCTTCCCTGGCAGCTGGTGGAACCTGGAGCGGATGGCCAGCATCCGCCAGGCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | CGGGGATGGCAGTACGGTTATAATCAGCCAGGCGAGCCAGAAGGGTaGGGACTACATCGGGTCGCTGGCCAGCCAGGTCCTCTCGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RGWQYGYNQPGEPEG*GLHRVAGQPGPLVR Trigger: ACGAACGAGAGGACCTGGCTGGCCAGCGACCCGATGTAGTCCGCACCCTTCTGGCTCGCCTGGCTGATTATAACCGTACTGCCATCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | CACGTCGTGGTACCCTTGGTCGTCGGTGAGGATGAAGATAATGTGTaGAGGCTGCGGTGGAGCCACCGAAGGCTGATCGCCAGCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HVVVPLVVGEDEDNV*RLRWSHRRLIASLG Trigger: GCCGAGGCTGGCGATCAGCCTTCGGTGGCTCCACCGCAGCCTCCACACATTATCTTCATCCTCACCGACGACCAAGGGTACCACGACGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | AGTCAGGATGGGCCCGAGGGTTCGCAGCTGGGTAACGCACGGGGATaGCAGTACGGTTATAATCAGCCAGGCGAGCCAGAAGGGTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQDGPEGSQLGNARG*QYGYNQPGEPEGCG Trigger: TCCGCACCCTTCTGGCTCGCCTGGCTGATTATAACCGTACTGCCATCCCCGTGCGTTACCCAGCTGCGAACCCTCGGGCCCATCCTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | AGCTTCTGGGGCAGCGTCACCTGGTCCAGGGGCAGACAGTTGGGCTaGCGTGGGCGGATAATGGAGTGCTGCAATCCTGTATGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFWGSVTWSRGRQLG*RGRIMECCNPVWIW Trigger: CCAGATCCATACAGGATTGCAGCACTCCATTATCCGCCCACGGCAGCCCAACTGTCTGCCCCTGGACCAGGTGACGCTGCCCCAGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | CCAGGTGATGTTACGCACAGCCTCGTCCATGCAGGTCACCATGGCTaGGTACTTGCGCCGTGCTACGTTGCCCATCGTGCGGTAGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGDVTHSLVHAGHHG*VLAPCYVAHRAVAV Trigger: TACCGCTACCGCACGATGGGCAACGTAGCACGGCGCAAGTACGCAGCCATGGTGACCTGCATGGACGAGGCTGTGCGTAACATCACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | CTGGGGCAGCGTCACCTGGTCCAGGGGCAGACAGTTGGGCTGCCGTaGGCGGATAATGGAGTGCTGCAATCCTGTATGGATCTGGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LGQRHLVQGQTVGLP*ADNGVLQSCMDLVP Trigger: AGGTACCAGATCCATACAGGATTGCAGCACTCCATTATCCGCCCACGGCAGCCCAACTGTCTGCCCCTGGACCAGGTGACGCTGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | ACTCCTTCCGGTAGAAGCCCAGATGCCACTTGCCCACCATGTGGGTaGAGTAGCCTGCCTCCTGTAGCTTCTGGGGCAGCGTCACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPSGRSPDATCPPCG*SSLPPVASGAASPG Trigger: ACCAGGTGACGCTGCCCCAGAAGCTACAGGAGGCAGGCTACTCCACCCACATGGTGGGCAAGTGGCATCTGGGCTTCTACCGGAAGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | TCAGCTGCTAGCCGGTCCAGCGTTGGGGTCTCGATATCCGAGCCATaGTATCCCACGTCGTGGTACCCTTGGTCGTCGGTGAGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAASRSSVGVSISEP*YPTSWYPWSSVRMK Trigger: CTTCATCCTCACCGACGACCAAGGGTACCACGACGTGGGATACCATGGCTCGGATATCGAGACCCCAACGCTGGACCGGCTAGCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | CTCCAGGTTCCACCAGCTGCCAGGGAAGGAGGCCAGTGTCTGAGGTaGAATCCAGTCACCATAGCCTGGGTCTCCAGTGAGCAGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQVPPAAREGGQCLR*NPVTIAWVSSEQLP Trigger: TGGAAGCTGCTCACTGGAGACCCAGGCTATGGTGACTGGATTCCACCTCAGACACTGGCCTCCTTCCCTGGCAGCTGGTGGAACCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | CCAAGCACCCCCATTAAAGTCAGGATGGGCCCGAGGGTTCGCAGCTaGGTAACGCACGGGGATGGCAGTACGGTTATAATCAGCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSTPIKVRMGPRVRS*VTHGDGSTVIISQA Trigger: CGCCTGGCTGATTATAACCGTACTGCCATCCCCGTGCGTTACCCAGCTGCGAACCCTCGGGCCCATCCTGACTTTAATGGGGGTGCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | AGGTCACCATGGCTGCGTACTTGCGCCGTGCTACGTTGCCCATCGTaGGGTAGCGGTATAGGTATTCTCGAGGTGACTGTAGGGGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSPWLRTCAVLRCPS*GSGIGILEVTVGAC Trigger: ACACGCCCCTACAGTCACCTCGAGAATACCTATACCGCTACCGCACGATGGGCAACGTAGCACGGCGCAAGTACGCAGCCATGGTGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | GTACCGCCTGCCAGACCCACCAGTGTTGGGTACCAGTCTGTGATATaGACCAGGGCCCGACTGGTCCGTCTCTTTTTCTTGAGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPARPTSVGYQSVI*TRARLVRLFFLSSG Trigger: CCCACTGCTCAAGAAAAAGAGACGGACCAGTCGGGCCCTGGTCCATATCACAGACTGGTACCCAACACTGGTGGGTCTGGCAGGCGGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTCCTTTCACAGCTGCTTCCCCCACCCTCACTATACAGTGGCTCAGGCAGGGGATTCTGGGGATaGTGGCTGGCCAGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QRLLSQLLPPPSLYSGSGRGFWG*WLARMW Trigger: CCACATCCTGGCCAGCCACAATCCCCAGAATCCCCT...GCCTGAGCCACTGTATAGTGAGGGTGGGGGAAGCAGCTGTGAAAGGAGCCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | CGTCCATGCAGGTCACCATGGCTGCGTACTTGCGCCGTGCTACGTTaGCCATCGTGCGGTAGCGGTATAGGTATTCTCGAGGTGACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RPCRSPWLRTCAVLR*PSCGSGIGILEVTV Trigger: TACAGTCACCTCGAGAATACCTATACCGCTACCGCACGATGGGCAACGTAGCACGGCGCAAGTACGCAGCCATGGTGACCTGCATGGACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 90 bp | TGTTACGCACAGCCTCGTCCATGCAGGTCACCATGGCTGCGTACTTaGGCCGTGCTACGTTGCCCATCGTGCGGTAGCGGTATAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: CYAQPRPCRSPWLRT*AVLRCPSCGSGIGI Trigger: AATACCTATACCGCTACCGCACGATGGGCAACGTAGCACGGCGCAAGTACGCAGCCATGGTGACCTGCATGGACGAGGCTGTGCGTAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | GGGGTCTCGATATCCGAGCCATGGTATCCCACGTCGTGGTACCCTTaGTCGTCGGTGAGGATGAAGATAATGTGTGGAGGCTGCGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: GVSISEPWYPTSWYP*SSVRMKIMCGGCGG Trigger: TCCACCGCAGCCTCCACACATTATCTTCATCCTCACCGACGACCAAGGGTACCACGACGTGGGATACCATGGCTCGGATATCGAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | CCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTGGAATCCAGGGGCAGACAGTaGGGCTGCCGTGGGCGGATA | + |
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Preference number: 5 (lower is better) Translates to: PRAPQRAGKRVMDSSCLESRGRQ*GCRGRI Trigger: TATCCGCCCACGGCAGCCCAACTGTCTGCCCCTGGA...TTCCAGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | CTGGTTGCTGCCCTTCCCCAAGTCCCACCCTATTCAGCTGAGGGCTTCTGTGCCATCTTGCATTTCTTCTaGCGGCGACCCCGGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LVAALPQVPPYSAEGFCAILHFF*RRPREK Trigger: TTTCTCCCGGGGTCGCCGCAAGAAGAAATGCAAGAT...GGCACAGAAGCCCTCAGCTGAATAGGGTGGGACTTGGGGAAGGGCAGCAACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | TCCAGCGTTGGGGTCTCGATATCCGAGCCATGGTATCCCACGTCGTaGTACCCTTGGTCGTCGGTGAGGATGAAGATAATGTGTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SSVGVSISEPWYPTS*YPWSSVRMKIMCGG Trigger: GCCTCCACACATTATCTTCATCCTCACCGACGACCAAGGGTACCACGACGTGGGATACCATGGCTCGGATATCGAGACCCCAACGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 90 bp | CCAGGCCACGCTCTCACCCTCGTGCAGGTCAAACCCACAAACCCCTaGGCCATCACAGTTGTCGTAGGTGTAGTAATCCACATTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: PGHALTLVQVKPTNP*AITVVVGVVIHIAC Trigger: ACAGGCAATGTGGATTACTACACCTACGACAACTGTGATGGCCCAGGGGTTTGTGGGTTTGACCTGCACGAGGGTGAGAGCGTGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | GGCAAAAAGGAAACTCATCAGGAAAGAGGCAGGATTGTGACCCAGGCAACCCAGCCTCGAAGGGGCCAGTaGCTACCCCCTGAGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: GKKETHQERGRIVTQATQPRRGQ*LPPEKV Trigger: GACCTTCTCAGGGGGTAGCAACTGGCCCCTTCGAGG...CTGGGTTGCCTGGGTCACAATCCTGCCTCTTTCCTGATGAGTTTCCTTTTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS TCA 90 bp | ACTAATGGCTGGCCATACATCATAGCCATCCAGCCCATCAGCTGCTaGTGTAGTACCGCCTGCCAGACCCACCAGTGTTGGGTACCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TNGWPYIIAIQPISC*CSTACQTHQCWVPV Trigger: GACTGGTACCCAACACTGGTGGGTCTGGCAGGCGGTACTACATCAGCAGCTGATGGGCTGGATGGCTATGATGTATGGCCAGCCATTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | ATATCCAAGAGCACCACAGAGAGCTGGAAAGAGGGTCATGGACTCAAGTTGTCTCTAGCCGGTCCAGCGTaGGGGTCTCGATATCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: ISKSTTESWKEGHGLKLSLAGPA*GSRYPS Trigger: GCTCGGATATCGAGACCCCAACGCTGGACCGGCTAG...AGACAACTTGAGTCCATGACCCTCTTTCCAGCTCTCTGTGGTGCTCTTGGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | TCATGGACTCAAGTTGTCTGGAAGGTGACAAGGTCAGCAAGAAACCCTGCCATGCACGTCGTGGTACCCTaGGTCGTCGGTGAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: SWTQVVWKVTRSARNPAMHVVVP*VVGEDE Trigger: TTCATCCTCACCGACGACCAAGGGTACCACGACGTG...CATGGCAGGGTTTCTTGCTGACCTTGTCACCTTCCAGACAACTTGAGTCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | AGCCAAGGCTCATATTTCCCTACTCCTTTGCAAGTAGGGAAATCAAGGCCCTGTAAGCCCAGATGCCACTaGCCCACCATGTGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SQGSYFPTPLQVGKSRPCKPRCH*PTMWVE Trigger: CTCCACCCACATGGTGGGCAAGTGGCATCTGGGCTT...ACAGGGCCTTGATTTCCCTACTTGCAAAGGAGTAGGGAAATATGAGCCTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | AGTTTTCTACAGCACCAGCAACGTGAGGTAGGCAGAGCCAAGGCTCATATTTCCGTCCGTCTCTTTTTCTaGAGCAGTGGGCTGTGGACA | + |
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Preference number: 5 (lower is better) Translates to: SFLQHQQREVGRAKAHISVRLFF*SSGLWT Trigger: TGTCCACAGCCCACTGCTCAAGAAAAAGAGACGGAC...GGAAATATGAGCCTTGGCTCTGCCTACCTCACGTTGCTGGTGCTGTAGAAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS-3UTR CAA 90 bp | CCAGATGTTGGGGACCAAAAGAGAAGAATTCCACTAGGCTCCCAAGTCATGAGGAAGGTCTGGCCACCATaGTCACTGGAGAAGATAATG | + |
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Preference number: 5 (lower is better) Translates to: PDVGDQKRRIPLGSQVMRKVWPP*SLEKIM Trigger: CATTATCTTCTCCAGTGACAATGGTGGCCAGACCTT...CCTCATGACTTGGGAGCCTAGTGGAATTCTTCTCTTTTGGTCCCCAACATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | GGCGGATGCTGGCCATCCGCTCCAGGTTCCACCAGCTaGCAGGGAAGGAGGCCAGTGTCTGAGGTGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: GGCWPSAPGSTS*QGRRPVSEVES Trigger: GGATTCCACCTCAGACACTGGCCTCCTTCCCTGGCAGCTGGTGGAACCTGGAGCGGATGGCCAGCATCCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS TCA 72 bp | ATAATGTGTGGAGGCTGCGGTGGAGCCACCGAAGGCTaGTCGCCAGCCTCGGCAGGCCCATCAGCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: IMCGGCGGATEG*SPASAGPSATR Trigger: CCTTGTGGCTGATGGGCCTGCCGAGGCTGGCGATCAGCCTTCGGTGGCTCCACCGCAGCCTCCACACATTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | CAGCCTCGTCCATGCAGGTCACCATGGCTGCGTACTTaGGCCGTGCTACGTTGCCCATCGTGCGGTAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: QPRPCRSPWLRT*AVLRCPSCGSG Trigger: ACCGCTACCGCACGATGGGCAACGTAGCACGGCGCAAGTACGCAGCCATGGTGACCTGCATGGACGAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | AGCCGGTCCAGCGTTGGGGTCTCGATATCCGAGCCATaGTATCCCACGTCGTGGTACCCTTGGTCGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SRSSVGVSISEP*YPTSWYPWSSV Trigger: CACCGACGACCAAGGGTACCACGACGTGGGATACCATGGCTCGGATATCGAGACCCCAACGCTGGACCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | GGTAGAAGCCCAGATGCCACTTGCCCACCATGTGGGTaGAGTAGCCTGCCTCCTGTAGCTTCTGGGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GRSPDATCPPCG*SSLPPVASGAA Trigger: CGCTGCCCCAGAAGCTACAGGAGGCAGGCTACTCCACCCACATGGTGGGCAAGTGGCATCTGGGCTTCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | GGGCCCGAGGGTTCGCAGCTGGGTAACGCACGGGGATaGCAGTACGGTTATAATCAGCCAGGCGAGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GPEGSQLGNARG*QYGYNQPGEPE Trigger: TTCTGGCTCGCCTGGCTGATTATAACCGTACTGCCATCCCCGTGCGTTACCCAGCTGCGAACCCTCGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CAA 90 bp | TCCTGTAGCTTCTGGGGCAGCGTCACCTGGTCCAGGGGCAGACAGTaGGGCTGCCGTGGGCGGATAATGGAGTGCTGCAATCCTGTATGG | + |
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Preference number: 6 (lower is better) Translates to: SCSFWGSVTWSRGRQ*GCRGRIMECCNPVW Trigger: CCATACAGGATTGCAGCACTCCATTATCCGCCCACGGCAGCCCAACTGTCTGCCCCTGGACCAGGTGACGCTGCCCCAGAAGCTACAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | CAGTACGGTTATAATCAGCCAGGCGAGCCAGAAGGGTaGGGACTACATCGGGTCGCTGGCCAGCCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QYGYNQPGEPEG*GLHRVAGQPGP Trigger: AGGACCTGGCTGGCCAGCGACCCGATGTAGTCCGCACCCTTCTGGCTCGCCTGGCTGATTATAACCGTACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | CCACCAGCTGCCAGGGAAGGAGGCCAGTGTCTGAGGTaGAATCCAGTCACCATAGCCTGGGTCTCCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PPAAREGGQCLR*NPVTIAWVSSE Trigger: CTCACTGGAGACCCAGGCTATGGTGACTGGATTCCACCTCAGACACTGGCCTCCTTCCCTGGCAGCTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | GGCAGACAGTTGGGCTGCCGTGGGCGGATAATGGAGTaGTGCAATCCTGTATGGATCTGGTACCTGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GRQLGCRGRIME*CNPVWIWYLPV Trigger: CACCGGCAGGTACCAGATCCATACAGGATTGCAGCACTCCATTATCCGCCCACGGCAGCCCAACTGTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | GCAAGCACTCCTTCCGGTAGAAGCCCAGATGCCACTTaGCCACCATGTGGGTGGAGTAGCCTGCCTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ASTPSGRSPDAT*PPCGWSSLPPV Trigger: TACAGGAGGCAGGCTACTCCACCCACATGGTGGGCAAGTGGCATCTGGGCTTCTACCGGAAGGAGTGCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | GGGATTCTGGGGATTGTGGCTGGCCAGGATGTGGCTTaGACGCTGAGCGTAGAGCATAGTGGAGTACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GILGIVAGQDVA*TLSVEHSGVLA Trigger: GGCCAGTACTCCACTATGCTCTACGCTCAGCGTGCAAGCCACATCCTGGCCAGCCACAATCCCCAGAATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | GTACCCTTGGTCGTCGGTGAGGATGAAGATAATGTGTaGAGGCTGCGGTGGAGCCACCGAAGGCTGATCGCC | + |
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Preference number: 6 (lower is better) Translates to: VPLVVGEDEDNV*RLRWSHRRLIA Trigger: GGCGATCAGCCTTCGGTGGCTCCACCGCAGCCTCCACACATTATCTTCATCCTCACCGACGACCAAGGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | CGTCACCTGGTCCAGGGGCAGACAGTTGGGCTGCCGTaGGCGGATAATGGAGTGCTGCAATCCTGTATGGAT | + |
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Preference number: 6 (lower is better) Translates to: RHLVQGQTVGLP*ADNGVLQSCMD Trigger: ATCCATACAGGATTGCAGCACTCCATTATCCGCCCACGGCAGCCCAACTGTCTGCCCCTGGACCAGGTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS TCA 72 bp | CACAGTTGTCGTAGGTGTAGTAATCCACATTGCCTGTaGGGGAACCCAGGAAGGTGTCGAAGCCCCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: HSCRRCSNPHCL*GNPGRCRSPGG Trigger: CCCGCCGGGGCTTCGACACCTTCCTGGGTTCCCTCACAGGCAATGTGGATTACTACACCTACGACAACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | AGACAGTTGGGCTGCCGTGGGCGGATAATGGAGTGCTaGAATCCTGTATGGATCTGGTACCTGCCGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RQLGCRGRIMEC*NPVWIWYLPVR Trigger: CCTCACCGGCAGGTACCAGATCCATACAGGATTGCAGCACTCCATTATCCGCCCACGGCAGCCCAACTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | AGGTCACCATGGCTGCGTACTTGCGCCGTGCTACGTTaGCCATCGTGCGGTAGCGGTATAGGTATTCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: RSPWLRTCAVLR*PSCGSGIGILE Trigger: CTCGAGAATACCTATACCGCTACCGCACGATGGGCAACGTAGCACGGCGCAAGTACGCAGCCATGGTGACCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS TCA 72 bp | TGGCCATACATCATAGCCATCCAGCCCATCAGCTGCTaGTGTAGTACCGCCTGCCAGACCCACCAGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WPYIIAIQPISC*CSTACQTHQCW Trigger: CCAACACTGGTGGGTCTGGCAGGCGGTACTACATCAGCAGCTGATGGGCTGGATGGCTATGATGTATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS GCA 72 bp | CAGCTTCCACTCCCCAACTCGGATAGCAGCCTGCACTaGTGTATTCCAGATCCCAAAGCCACCCTCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: QLPLPNSDSSLH*CIPDPKATLQG Trigger: TCCTTGGAGGGTGGCTTTGGGATCTGGAATACAGCAGTGCAGGCTGCTATCCGAGTTGGGGAGTGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | CCACATAGAGAAAGAGGGGATTCTGGGGATTGTGGCTaGCCAGGATGTGGCTTGCACGCTGAGCGTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PHRERGDSGDCG*PGCGLHAERRA Trigger: TGCTCTACGCTCAGCGTGCAAGCCACATCCTGGCCAGCCACAATCCCCAGAATCCCCTCTTTCTCTATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | GCCAGACCCACCAGTGTTGGGTACCAGTCTGTGATATaGACCAGGGCCCGACTGGTCCGTCTCTTTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ARPTSVGYQSVI*TRARLVRLFFL Trigger: CAAGAAAAAGAGACGGACCAGTCGGGCCCTGGTCCATATCACAGACTGGTACCCAACACTGGTGGGTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | CCCATTAAAGTCAGGATGGGCCCGAGGGTTCGCAGCTaGGTAACGCACGGGGATGGCAGTACGGTTATAATC | + |
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Preference number: 6 (lower is better) Translates to: PIKVRMGPRVRS*VTHGDGSTVII Trigger: GATTATAACCGTACTGCCATCCCCGTGCGTTACCCAGCTGCGAACCCTCGGGCCCATCCTGACTTTAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | GGGGTCTCGATATCCGAGCCATGGTATCCCACGTCGTaGTACCCTTGGTCGTCGGTGAGGATGAAGATAATG | + |
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Preference number: 6 (lower is better) Translates to: GVSISEPWYPTS*YPWSSVRMKIM Trigger: CATTATCTTCATCCTCACCGACGACCAAGGGTACCACGACGTGGGATACCATGGCTCGGATATCGAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | GCTCTCACCCTCGTGCAGGTCAAACCCACAAACCCCTaGGCCATCACAGTTGTCGTAGGTGTAGTAATCCAC | + |
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Preference number: 6 (lower is better) Translates to: ALTLVQVKPTNP*AITVVVGVVIH Trigger: GTGGATTACTACACCTACGACAACTGTGATGGCCCAGGGGTTTGTGGGTTTGACCTGCACGAGGGTGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS CCA 72 bp | ATATCCGAGCCATGGTATCCCACGTCGTGGTACCCTTaGTCGTCGGTGAGGATGAAGATAATGTGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ISEPWYPTSWYP*SSVRMKIMCGG Trigger: GCCTCCACACATTATCTTCATCCTCACCGACGACCAAGGGTACCACGACGTGGGATACCATGGCTCGGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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| CDS TCA 72 bp | AGTGCTGCAATCCTGTATGGATCTGGTACCTGCCGGTaGGGAGTTGACTCCTCGAAGGTGTACATATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SAAILYGSGTCR*GVDSSKVYIWA Trigger: AGCCCATATGTACACCTTCGAGGAGTCAACTCCTCACCGGCAGGTACCAGATCCATACAGGATTGCAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040359.6 |
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