Pregenerated sensors for ARSB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042082Ensembl transcript IDs: ENSMUST00000091403.6
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTCTGCCTTACTGAGGCCAACATTCCATGGCCACTTCCTTTCTaGGACTGCTCAGGGCGAAGAAGTGCTATCCTGGCCTTTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LLCLTEANIPWPLPF*DCSGRRSAILAFLA Trigger: GGCAAGAAAGGCCAGGATAGCACTTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAGTAAGGCAGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTaGCATTCATTGACTGCCCAGATCATTCTCCCGCTAGCGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: EAEFSFVYLQRPSQT*HSLTAQIILPLAQR Trigger: CCTCTGCGCTAGCGGGAGAATGATCTGGGCAGTCAATGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 90 bp | TGCTCAGGGCGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTGCTTaGGAAAACAGCATAGACCATGGCATAGTGGGAGATATAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: CSGRRSAILAFLATA*ENSIDHGIVGDIAT Trigger: TGTGGCTATATCTCCCACTATGCCATGGTCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGCCCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 90 bp | AAACAGAGAATGAAAGGGACATGGATGGTGTCTCCTCTGCCTTACTaGGGCCAACATTCCATGGCCACTTCCTTTCTGAGACTGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: KQRMKGTWMVSPLPY*GQHSMATSFLRLLR Trigger: CCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAGTAAGGCAGAGGAGACACCATCCATGTCCCTTTCATTCTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 90 bp | TTTCTGAGACTGCTCAGGGCGAAGAAGTGCTATCCTGGCCTTTCTTaGCACTGCTTGAGAAAACAGCATAGACCATGGCATAGTGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FLRLLRAKKCYPGLS*HCLRKQHRPWHSGR Trigger: TCTCCCACTATGCCATGGTCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGCCCTGAGCAGTCTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 90 bp | CATTCCATGGCCACTTCCTTTCTGAGACTGCTCAGGGCGAAGAAGTaGTATCCTGGCCTTTCTTGCCACTGCTTGAGAAAACAGCATAGA | + |
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Preference number: 1 (lower is better) Translates to: HSMATSFLRLLRAKK*YPGLSCHCLRKQHR Trigger: TCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 90 bp | TGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCTaGCAGTCAAATAGTGTATCCTCATTCTCCAAGCCCAGAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: WWTHIGKMYEGLRKG*QSNSVSSFSKPRIQ Trigger: CTGGATTCTGGGCTTGGAGAATGAGGATACACTATTTGACTGTCAGCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 90 bp | CACAGACAGGGAGCACTCACAGCCAACAGAACCACTAGCAACATCTaGTCCCTGCCTTTGTTACAAGAAATGTGTCTTGCCAATAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: HRQGALTANRTTSNI*SLPLLQEMCLANKA Trigger: AGCTTTATTGGCAAGACACATTTCTTGTAACAAAGGCAGGGAGCAGATGTTGCTAGTGGTTCTGTTGGCTGTGAGTGCTCCCTGTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 90 bp | AGGGAGCACTCACAGCCAACAGAACCACTAGCAACATCTGCTCCCTaGCTTTGTTACAAGAAATGTGTCTTGCCAATAAAGCTGGTTATT | + |
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Preference number: 1 (lower is better) Translates to: REHSQPTEPLATSAP*LCYKKCVLPIKLVI Trigger: AATAACCAGCTTTATTGGCAAGACACATTTCTTGTAACAAAGGCAGGGAGCAGATGTTGCTAGTGGTTCTGTTGGCTGTGAGTGCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR CCA 90 bp | TATCCTGGCCTTTCTTGCCACTGCTTGAGAAAACAGCATAGACCATaGCATAGTGGGAGATATAGCCACAATCTTGACAGATTCCATGCA | + |
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Preference number: 1 (lower is better) Translates to: YPGLSCHCLRKQHRP*HSGRYSHNLDRFHA Trigger: TGCATGGAATCTGTCAAGATTGTGGCTATATCTCCCACTATGCCATGGTCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 90 bp | ATAGTGGGAGATATAGCCACAATCTTGACAGATTCCATGCAACTGTaGATAATCCTCCTTAGCAGATGCCACAGACCCACAACTCCCATT | + |
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Preference number: 1 (lower is better) Translates to: IVGDIATILTDSMQL*IILLSRCHRPTTPI Trigger: AATGGGAGTTGTGGGTCTGTGGCATCTGCTAAGGAGGATTATTCACAGTTGCATGGAATCTGTCAAGATTGTGGCTATATCTCCCACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR CCA 90 bp | GGAGGAGTATTCAGACTCATGTCACTCAGACTCTGTCACAGTCTTTaGAGTAAAAAGTGTCCTAATGGCAGGCTATATGTCAGCCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GGVFRLMSLRLCHSL*SKKCPNGRLYVSQV Trigger: AACTTGGCTGACATATAGCCTGCCATTAGGACACTTTTTACTCCAAAGACTGTGACAGAGTCTGAGTGACATGAGTCTGAATACTCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | GCGGAAAGCCCGAGTAAGAGCTCACAGACAGGGAGCACTCACAGCCAACAGAACAGGGGAGTAGGGGCCTaGGGTCTAGCCTGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: AESPSKSSQTGSTHSQQNRGVGA*GLACPE Trigger: TTCTGGGCAGGCTAGACCTCAGGCCCCTACTCCCCT...GTTCTGTTGGCTGTGAGTGCTCCCTGTCTGTGAGCTCTTACTCGGGCTTTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CCA 90 bp | GCGGAAAGCCCGAGTAAGAGCTCACAGACAGGGAGCACTCACAGCCAACAGAACAAGAGCCAGCTGTCCTaGCCTCCAGGACTCAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: AESPSKSSQTGSTHSQQNKSQLS*PPGLRD Trigger: ATCCCTGAGTCCTGGAGGCCAGGACAGCTGGCTCTT...GTTCTGTTGGCTGTGAGTGCTCCCTGTCTGTGAGCTCTTACTCGGGCTTTCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR CAA 90 bp | TGCCCAGATCATTCTCCCGCTAGCGCAGAGGTGGGAGGGGACAGCTaGAGGACAGAATCGGAAGGGCTGGAGGATATTTATTCTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: CPDHSPASAEVGGDS*RTESEGLEDIYSAL Trigger: AAGGGCAGAATAAATATCCTCCAGCCCTTCCGATTCTGTCCTCAAGCTGTCCCCTCCCACCTCTGCGCTAGCGGGAGAATGATCTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CCA 90 bp | GACAGTCAAATAGTGTATCCTCATTCTCCAAGCCCAGAATCCAGAGCCCCAGAACCAGTCCACCTCCTCTaGGCAGGGCTTAGGACTATC | + |
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Preference number: 2 (lower is better) Translates to: DSQIVYPHSPSPESRAPEPVHLL*AGLRTI Trigger: GATAGTCCTAAGCCCTGCCCAGAGGAGGTGGACTGG...TTCTGGGGCTCTGGATTCTGGGCTTGGAGAATGAGGATACACTATTTGACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCATGGCCACTTCCTTTCTaGGACTGCTCAGGGCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSWPLPF*DCSGRR Trigger: TCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCA...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | CTGCGAATCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCCTAACAGCTGACTTGTaGAGCAAAAAGAGCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LRIWWTHIGKMYEGLRKGLTADL*SKKSQL Trigger: CAGCTGGCTCTTTTTGCTTCACAAGTCAGCTGTTAG...GCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGATTCGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCAAATAGTGTATCCTCATTCTCCAAGCCCAGAATCCAGAGCCCCAGAAAAAGCTCAGAATGGGTaGAGCAGAGGGGAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: DSQIVYPHSPSPESRAPEKAQNG*SRGERD Trigger: GTCTCTCTCCCCTCTGCTTCACCCATTCTGAGCTTT...TTCTGGGGCTCTGGATTCTGGGCTTGGAGAATGAGGATACACTATTTGACTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCAGGCCAGGTGACAGGGTaGGGGATGATAAAGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSGQVTG*GMIKKR Trigger: TCTCTTCTTTATCATCCCCCACCCTGTCACCTGGCC...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCAAGATGTATGAGGGTCTaGGAAAGGGCTGACAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSRCMRV*ERADSQ Trigger: TTGACTGTCAGCCCTTTCTCAGACCCTCATACATCT...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCCGGGAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGGCAACATCTGCTCCCTaGCTTTGTTACAAGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FPGSRILFCLPAEAITDLATSAP*LCYKKC Trigger: ACATTTCTTGTAACAAAGGCAGGGAGCAGATGTTGC...CAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTCCCGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCAAATAGTGTATCCTCATTCTCCAAGCCCAGAATCCAGAGCCCCAGAAGGGAGTTCTAACAGCTaGCTTGTGAAGCAAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DSQIVYPHSPSPESRAPEGSSNS*LVKQKE Trigger: CTCTTTTTGCTTCACAAGTCAGCTGTTAGAACTCCC...TTCTGGGGCTCTGGATTCTGGGCTTGGAGAATGAGGATACACTATTTGACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR CAA 90 bp | GCAAGATCCTTCCAGATTTTACTGGCTTTTAGAATGTACTGTGGGTaGAAATTGGACTCCTTTGGTGGGTTATGTAGCATGAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ARSFQILLAFRMYCG*KLDSFGGLCSMRAR Trigger: CCTGGCCCTCATGCTACATAACCCACCAAAGGAGTCCAATTTCAACCCACAGTACATTCTAAAAGCCAGTAAAATCTGGAAGGATCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTTCTGAGAACACTAAGGAACGATCAGGTAGGTGTTATGAAGTAGGGACCATTCCTAGTGTGCAGTaGAGAATGGAAATGGAGATT | + |
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Preference number: 2 (lower is better) Translates to: SCSENTKERSGRCYEVGTIPSVQ*RMEMEI Trigger: AATCTCCATTTCCATTCTTCACTGCACACTAGGAAT...GGTCCCTACTTCATAACACCTACCTGATCGTTCCTTAGTGTTCTCAGAACAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | CACAGACCCACAACTCCCATTAGCATGGACACAGAATaGCCAGTCCACCTCCTCTGGGCAGGGCTTAGGACT | + |
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Preference number: 3 (lower is better) Translates to: HRPTTPISMDTE*PVHLLWAGLRT Trigger: AGTCCTAAGCCCTGCCCAGAGGAGGTGGACTGGTCATTCTGTGTCCATGCTAATGGGAGTTGTGGGTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | CTTACTGAGGCCAACATTCCATGGCCACTTCCTTTCTaGGACTGCTCAGGGCGAAGAAGTGCTATCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LTEANIPWPLPF*DCSGRRSAILA Trigger: GGCCAGGATAGCACTTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 72 bp | AGGGCGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTaGTTGAGAAAACAGCATAGACCATGGCATAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RAKKCYPGLSCH*LRKQHRPWHSG Trigger: CCCACTATGCCATGGTCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 72 bp | GCCACTTCCTTTCTGAGACTGCTCAGGGCGAAGAAGTaGTATCCTGGCCTTTCTTGCCACTGCTTGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: ATSFLRLLRAKK*YPGLSCHCLRK Trigger: TTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | ATGAAAGGGACATGGATGGTGTCTCCTCTGCCTTACTaGGGCCAACATTCCATGGCCACTTCCTTTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: MKGTWMVSPLPY*GQHSMATSFLR Trigger: TCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAGTAAGGCAGAGGAGACACCATCCATGTCCCTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 72 bp | TTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTaGCATTCATTGACTGCCCAGATCATTCTCCCGCTA | + |
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Preference number: 3 (lower is better) Translates to: FSFVYLQRPSQT*HSLTAQIILPL Trigger: TAGCGGGAGAATGATCTGGGCAGTCAATGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGCCAACATTCCATGGCCACTTCCTTTCTGAGACTGCTCAGGGCGAAGAAGATATAGCCACAATCTaGACAGATTCCATGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: LRPTFHGHFLSETAQGEEDIATI*TDSMQL Trigger: CAGTTGCATGGAATCTGTCAAGATTGTGGCTATATC...TTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTTCTGAGAACACTAAGGAACGATCAGGTAGGTGTTATGAAGTAGGGACCGAAGTACCACTGGGTTaGACACACCCTGCTGCGAAT | + |
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Preference number: 3 (lower is better) Translates to: SCSENTKERSGRCYEVGTEVPLG*THPAAN Trigger: ATTCGCAGCAGGGTGTGTCAAACCCAGTGGTACTTC...GGTCCCTACTTCATAACACCTACCTGATCGTTCCTTAGTGTTCTCAGAACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | CGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTGCTTaGGAAAACAGCATAGACCATGGCATAGTGGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: RRSAILAFLATA*ENSIDHGIVGD Trigger: ATCTCCCACTATGCCATGGTCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | ATGACAGGAACAGAGCCACACAAGCTGGGTAGCAGAAGTCTAGACAGAATGAGCTACTGTGGGTTGAAATaGGACTCCTTTGGTGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: MTGTEPHKLGSRSLDRMSYCGLK*DSFGGL Trigger: TAACCCACCAAAGGAGTCCAATTTCAACCCACAGTA...GCTCATTCTGTCTAGACTTCTGCTACCCAGCTTGTGTGGCTCTGTTCCTGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | CTGCGAATCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCATCTGCTCCCTGCCTTaGTTACAAGAAATGTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LRIWWTHIGKMYEGLRKGICSLP*LQEMCL Trigger: AAGACACATTTCTTGTAACAAAGGCAGGGAGCAGAT...GCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGATTCGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCACTTTCTTGCCACTGCTaGAGAAAACAGCATAGACCA | + |
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Preference number: 3 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSLSCHC*RKQHRP Trigger: TGGTCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAG...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | CACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCTaGCAGTCAAATAGTGTATCCTCATTCTCCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HIGKMYEGLRKG*QSNSVSSFSKP Trigger: GGGCTTGGAGAATGAGGATACACTATTTGACTGTCAGCCCTTTCTCAGACCCTCATACATCTTACCGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | GACAGTCAAATAGTGTATCCTCATTCTCCAAGCCCAGAATCCAGAGCCCCAGAAAGAATGTACTGTGGGTaGAAATTGGACTCCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: DSQIVYPHSPSPESRAPERMYCG*KLDSFG Trigger: ACCAAAGGAGTCCAATTTCAACCCACAGTACATTCT...TTCTGGGGCTCTGGATTCTGGGCTTGGAGAATGAGGATACACTATTTGACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTTCTGAGAACACTAAGGAACGATCAGGTAGGTGTTATGAAGTAGGGACCATGTCGCAGACATGGTaGCTGATGTTGGTGATAAAC | + |
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Preference number: 3 (lower is better) Translates to: SCSENTKERSGRCYEVGTMSQTW*LMLVIN Trigger: GTTTATCACCAACATCAGCAACCATGTCTGCGACAT...GGTCCCTACTTCATAACACCTACCTGATCGTTCCTTAGTGTTCTCAGAACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | TCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTaGGAAAGGGCTGACAGTCAAATAGTGTATCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SGGLTSVRCMRV*ERADSQIVYPH Trigger: ATGAGGATACACTATTTGACTGTCAGCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | GATATAGCCACAATCTTGACAGATTCCATGCAACTGTaGATAATCCTCCTTAGCAGATGCCACAGACCCACA | + |
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Preference number: 3 (lower is better) Translates to: DIATILTDSMQL*IILLSRCHRPT Trigger: TGTGGGTCTGTGGCATCTGCTAAGGAGGATTATTCACAGTTGCATGGAATCTGTCAAGATTGTGGCTATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 72 bp | TCACAGCCAACAGAACCACTAGCAACATCTGCTCCCTaGCTTTGTTACAAGAAATGTGTCTTGCCAATAAAG | + |
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Preference number: 3 (lower is better) Translates to: SQPTEPLATSAP*LCYKKCVLPIK Trigger: CTTTATTGGCAAGACACATTTCTTGTAACAAAGGCAGGGAGCAGATGTTGCTAGTGGTTCTGTTGGCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR CCA 72 bp | TTCAGACTCATGTCACTCAGACTCTGTCACAGTCTTTaGAGTAAAAAGTGTCCTAATGGCAGGCTATATGTC | + |
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Preference number: 3 (lower is better) Translates to: FRLMSLRLCHSL*SKKCPNGRLYV Trigger: GACATATAGCCTGCCATTAGGACACTTTTTACTCCAAAGACTGTGACAGAGTCTGAGTGACATGAGTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR GCA 72 bp | ATTCTGCCCTTACAGTCAGCTCACTGGACTAGTAAATaGCAGGTAACTCTTTCTCGTTTACTTTGTTTATTA | + |
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Preference number: 3 (lower is better) Translates to: ILPLQSAHWTSK*QVTLSRLLCLL Trigger: TAATAAACAAAGTAAACGAGAAAGAGTTACCTGGCATTTACTAGTCCAGTGAGCTGACTGTAAGGGCAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR TCA 72 bp | AAATACAGAATATTAATGACCAGGAGATGCTGCTACTaGACTGAAGATGACTGTGCATATCATATTATTTGG | + |
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Preference number: 3 (lower is better) Translates to: KYRILMTRRCCY*TEDDCAYHIIW Trigger: CCAAATAATATGATATGCACAGTCATCTTCAGTTCAGTAGCAGCATCTCCTGGTCATTAATATTCTGTATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CCA 90 bp | AGAAGCCAGGGGAGTAGGGGCCTGAGGTCTAGCCTGCCCAGAAATGGGCTCCAGCAGCAGCAGCAAGAGTaGCAGCTGCGGCCCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: RSQGSRGLRSSLPRNGLQQQQQE*QLRPGT Trigger: GGTCCCGGGCCGCAGCTGCCACTCTTGCTGCTGCTG...CTGGAGCCCATTTCTGGGCAGGCTAGACCTCAGGCCCCTACTCCCCTGGCTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR GCA 90 bp | TTCCCGGGAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGAGCAAGAGTGGCAGCTaGGGCCCGGGACCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGSRILFCLPAEAITDLSKSGS*GPGPPG Trigger: GCCTGGAGGTCCCGGGCCGCAGCTGCCACTCTTGCT...CAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTCCCGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | TTCCCGGGAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGGGCTCCGCGAGGGCGTaGACAGCGGCTGCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPGSRILFCLPAEAITDLGSARA*TAAARS Trigger: ACTACGTGCAGCCGCTGTGCACGCCCTCGCGGAGCC...CAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTCCCGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCAGGGGAGTAGGGGCCTGAGGTCTAGCCTGCCCAGAAATGGGCTCCAGTCCAAGGGTGGGAAGTaGGAAGGCACAGAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQGSRGLRSSLPRNGLQSKGGK*EGTECS Trigger: TGAACATTCTGTGCCTTCTCACTTCCCACCCTTGGA...CTGGAGCCCATTTCTGGGCAGGCTAGACCTCAGGCCCCTACTCCCCTGGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCATCTGATAGCGGCCGGTaGGCAGCTGGCTCCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSSDSGR*AAGSAR Trigger: CCTCGCGGAGCCAGCTGCTCACCGGCCGCTATCAGA...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | AGGACTATCCTAAAGCTCAGAATGGGTGAAGCAGAGGGGAGAGAGACCTCAGGCAGCACGAAGACCACATaGGGAGGCTGGGTAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTILKLRMGEAEGRETSGSTKTT*GGWVAP Trigger: CGGAGCTACCCAGCCTCCGCATGTGGTCTTCGTGCT...GCCTGAGGTCTCTCTCCCCTCTGCTTCACCCATTCTGAGCTTTAGGATAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| 3UTR CAA 72 bp | GTCTACCTGCAGAGGCCATCACAGACCTGCCATTCATaGACTGCCCAGATCATTCTCCCGCTAGCGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLQRPSQTCHS*TAQIILPLAQR Trigger: CCTCTGCGCTAGCGGGAGAATGATCTGGGCAGTCAATGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGAGAGAGACCTCAGGCACAGGACAGTGAAGTCCAAAGGCATGACAGGACCACTGCTTCATCCATaGGGGACACCATCCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGERDLRHRTVKSKGMTGPLLHP*GTPSLH Trigger: ATGCAGGGATGGTGTCCCTCATGGATGAAGCAGTGG...TCCTGTCATGCCTTTGGACTTCACTGTCCTGTGCCTGAGGTCTCTCTCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCAACATTCCATGGCCACTTCCTTTCTGAGACTGCTCAGGGCGAAGAATACTCCTCAGGGACCTaGAGGGGATCGTGGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPTFHGHFLSETAQGEEYSSGT*RGSWTD Trigger: GTCTGTCCACGATCCCCTGCAGGTCCCTGAGGAGTA...TTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCAAGCCCGTTCCTCGGATaGCCCCTTCCCACAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSSPFLG*PLPTGS Trigger: GGACCCTGTGGGAAGGGGGCATCCGAGGAACGGGCT...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | AGGACTATCCTAAAGCTCAGAATGGGTGAAGCAGAGGGGAGAGAGACCTCAGGCTTTCAGCAAGGGGCTTaGCACGAAGCCCGTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTILKLRMGEAEGRETSGFQQGA*HEARSS Trigger: CGAGGAACGGGCTTCGTGGCAAGCCCCTTGCTGAAA...GCCTGAGGTCTCTCTCCCCTCTGCTTCACCCATTCTGAGCTTTAGGATAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CCA 90 bp | CTGCGAATCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCACACACCAGTGCTCTTaGGATCGCAGCGGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRIWWTHIGKMYEGLRKGTHQCS*DRSGGP Trigger: TGGACCCCCGCTGCGATCCCAAGAGCACTGGTGTGT...GCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGATTCGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR TCA 90 bp | AGCTGTTCTGAGAACACTAAGGAACGATCAGGTAGGTGTTATGAAGTAGGGACCGGTGCGGCGTGCGGATaGCCGAGCCGTGAAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSENTKERSGRCYEVGTGAACG*PSRENP Trigger: TGGGTTTTCACGGCTCGGTCATCCGCACGCCGCACC...GGTCCCTACTTCATAACACCTACCTGATCGTTCCTTAGTGTTCTCAGAACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACAGAGCCACACAAGCTGGGTAGCAGAAGTCTAGACAGAATGAGCGGTGACGTTCCCCACTaGTTCATCCATGAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: MTGTEPHKLGSRSLDRMSGDVPH*FIHEGH Trigger: GTGTCCCTCATGGATGAAGCAGTGGGGAACGTCACC...GCTCATTCTGTCTAGACTTCTGCTACCCAGCTTGTGTGGCTCTGTTCCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | CTGCGAATCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCCTGGAGTCATGTTCTTaGCAGGACATGGCAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRIWWTHIGKMYEGLRKGLESCS*QDMASH Trigger: ATGGCTTGCCATGTCCTGGCAAGAACATGACTCCAG...GCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGATTCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCCAACATTCCATGGCCACTTCCTTTCTGAGACTGCTCAGGGCGAAGAAAGAATCGTCCTTTGCTaGAGTCATGTTCTTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPTFHGHFLSETAQGEERIVLC*SHVLAR Trigger: CCTGGCAAGAACATGACTCCAGCAAAGGACGATTCT...TTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACAGAGCCACACAAGCTGGGTAGCAGAAGTCTAGACAGAATGAGCCCAGAGAGTCTTGGTTaGTGGGTCCACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTEPHKLGSRSLDRMSPESLG*WVHWRY Trigger: ATACCTCCAGTGGACCCACCAACCAAGACTCTCTGG...GCTCATTCTGTCTAGACTTCTGCTACCCAGCTTGTGTGGCTCTGTTCCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CCA 90 bp | ATGACAGGAACAGAGCCACACAAGCTGGGTAGCAGAAGTCTAGACAGAATGAGCAAAGCCAGAGAGTCTTaGTTGGTGGGTCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTGTEPHKLGSRSLDRMSKARES*LVGPLE Trigger: CTCCAGTGGACCCACCAACCAAGACTCTCTGGCTTT...GCTCATTCTGTCTAGACTTCTGCTACCCAGCTTGTGTGGCTCTGTTCCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| 3UTR CAA 72 bp | TGGCAAAGGAGACTTCCCGGGAAGCAGAATTCTCTTTaGTCTACCTGCAGAGGCCATCACAGACCTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: WQRRLPGKQNSL*STCRGHHRPAI Trigger: AATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTCCCGGGAAGTCTCCTTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CCA 90 bp | CTGCGAATCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCTTGGATGAAGCCATATaGCTCCATGTACTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRIWWTHIGKMYEGLRKGLDEAI*LHVLLR Trigger: CCTGAGGAGTACATGGAGCCATATGGCTTCATCCAA...GCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGATTCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR TCA 90 bp | TTCCCGGGAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGTATCTGTGGAGAAGATaGAGACCGTGTTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPGSRILFCLPAEAITDLYLWRR*RPCCSR Trigger: TCTGGAACAACACGGTCTTCATCTTCTCCACAGATA...CAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTCCCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR TCA 90 bp | AGCTGTTCTGAGAACACTAAGGAACGATCAGGTAGGTGTTATGAAGTAGGGACCAGCCTGGGTGGCCCGTaGGGAGTTTCCAATTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCSENTKERSGRCYEVGTSLGGP*GVSNFC Trigger: ACAAAAATTGGAAACTCCTCACGGGCCACCCAGGCT...GGTCCCTACTTCATAACACCTACCTGATCGTTCCTTAGTGTTCTCAGAACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCAACATTCCATGGCCACTTCCTTTCTGAGACTGCTCAGGGCGAAGAATGTAATAGTCTTCACTaGCTAGGAGGTATCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRPTFHGHFLSETAQGEECNSLH*LGGIRS Trigger: ACTTCGGATACCTCCTAGGCAGTGAAGACTATTACA...TTCTTCGCCCTGAGCAGTCTCAGAAAGGAAGTGGCCATGGAATGTTGGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR TCA 90 bp | CTGCGAATCTGGTGGACTCACATCGGTAAGATGTATGAGGGTCTGAGAAAGGGCCTTTCTTCAGGGTCCTaGTTGATATCAAAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRIWWTHIGKMYEGLRKGLSSGS*LISKSQ Trigger: CTGGCTTTTTGATATCAATCAGGACCCTGAAGAAAG...GCCCTTTCTCAGACCCTCATACATCTTACCGATGTGAGTCCACCAGATTCGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CCA 90 bp | ATGACAGGAACAGAGCCACACAAGCTGGGTAGCAGAAGTCTAGACAGAATGAGCGCTTCCTTTAAAAGCTaGGGCAGGAGTTTTTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTEPHKLGSRSLDRMSASFKS*GRSFSS Trigger: AGACGAAAAACTCCTGCCCCAGCTTTTAAAGGAAGC...GCTCATTCTGTCTAGACTTCTGCTACCCAGCTTGTGTGGCTCTGTTCCTGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR TCA 90 bp | GCGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTGCTTGAGAAAACAGCATAGACTTCAGGGTCCTGATTaGTATCAAAAAGCCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKKCYPGLSCHCLRKQHRLQGPD*YQKARE Trigger: CTCTCTGGCTTTTTGATATCAATCAGGACCCTGAAG...TCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCATATCTGATCCCAGCATaGATAGACGTGTTAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSYLIPA*IDVLKA Trigger: TGCCTTTAACACGTCTATCCATGCTGGGATCAGATA...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| 3UTR CAA 72 bp | GCCAACAGAACCACTAGCAACATCTGCTCCCTGCCTTaGTTACAAGAAATGTGTCTTGCCAATAAAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ANRTTSNICSLP*LQEMCLANKAG Trigger: ACCAGCTTTATTGGCAAGACACATTTCTTGTAACAAAGGCAGGGAGCAGATGTTGCTAGTGGTTCTGTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| 3UTR CAA 72 bp | ACATCTGCTCCCTGCCTTTGTTACAAGAAATGTGTCTaGCCAATAAAGCTGGTTATTAGCAGAGGGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSAPCLCYKKCV*PIKLVISRGSS Trigger: AGAACTCCCTCTGCTAATAACCAGCTTTATTGGCAAGACACATTTCTTGTAACAAAGGCAGGGAGCAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR GCA 90 bp | GCGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTGCTTGAGAAAACAGCATAGAATTGTTATACTCTTTTaGAGGTTCTTCACCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKKCYPGLSCHCLRKQHRIVILF*RFFTIS Trigger: AGAGATGGTGAAGAACCTGCAAAAGAGTATAACAAT...TCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| 3UTR CAA 72 bp | TTCCAGATTTTACTGGCTTTTAGAATGTACTGTGGGTaGAAATTGGACTCCTTTGGTGGGTTATGTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FQILLAFRMYCG*KLDSFGGLCSM Trigger: CATGCTACATAACCCACCAAAGGAGTCCAATTTCAACCCACAGTACATTCTAAAAGCCAGTAAAATCTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS GCA 90 bp | GTAGCTCCGGAGGCCCGGGCCGGCGACAGCAGCAGCAGCAGCAGCTaGAGCAGCAGCAGCAAGAGTGGCAGCTGCGGCCCGGGACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VAPEARAGDSSSSSS*SSSSKSGSCGPGPP Trigger: TGGAGGTCCCGGGCCGCAGCTGCCACTCTTGCTGCTGCTGCTGCAGCTGCTGCTGCTGCTGCTGTCGCCGGCCCGGGCCTCCGGAGCTAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS TCA 90 bp | GGACCACGCCGCCGGCCGCCAGCGCATCCAGGTGCGGCGTGCGGATaGCCGAGCCGTGAAAACCCAAGTCGTTCCAGCCCAGGTCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPRRRPPAHPGAACG*PSRENPSRSSPGRP Trigger: CGGACGACCTGGGCTGGAACGACTTGGGTTTTCACGGCTCGGTCATCCGCACGCCGCACCTGGATGCGCTGGCGGCCGGCGGCGTGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS TCA 90 bp | CCGGCCGCCAGCGCATCCAGGTGCGGCGTGCGGATGACCGAGCCGTaGAAACCCAAGTCGTTCCAGCCCAGGTCGTCCGCCAGCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAASASRCGVRMTEP*KPKSFQPRSSASTK Trigger: CTTCGTGCTGGCGGACGACCTGGGCTGGAACGACTTGGGTTTTCACGGCTCGGTCATCCGCACGCCGCACCTGGATGCGCTGGCGGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS GCA 90 bp | CATGAGTTCCCGGCTCTTCACGCCTTTCTGTTTCAGCAAGGGGCTTaGCACGAAGCCCGTTCCTCGGATGCCCCCTTCCCACAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HEFPALHAFLFQQGA*HEARSSDAPFPQGP Trigger: GGGACCCTGTGGGAAGGGGGCATCCGAGGAACGGGCTTCGTGGCAAGCCCCTTGCTGAAACAGAAAGGCGTGAAGAGCCGGGAACTCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCAGGGGAGTAGGGGCCTGAGGTCTAGCCTGCCCAGAAATGGGCTCCAGGTTTCAGCAAGGGGCTaGCCACGAAGCCCGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSQGSRGLRSSLPRNGLQVSARG*PRSPFL Trigger: GAGGAACGGGCTTCGTGGCAAGCCCCTTGCTGAAAC...CTGGAGCCCATTTCTGGGCAGGCTAGACCTCAGGCCCCTACTCCCCTGGCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS CCA 90 bp | AGAGAGTCTTGGTTGGTGGGTCCACTGGAGGTATCTCAGAGACGTTaGACTGAGACGGAGGCGGGAACCAGTAACCACAGCCTGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RESWLVGPLEVSQRR*TETEAGTSNHSLGG Trigger: GCCACCCAGGCTGTGGTTACTGGTTCCCGCCTCCGTCTCAGTCCAACGTCTCTGAGATACCTCCAGTGGACCCACCAACCAAGACTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS CCA 90 bp | GCTCCACACACCAGTGCTCTTGGGATCGCAGCGGGGGTCCAAGGGTaGGAAGTGAGAAGGCACAGAATGTTCATGGTAGTACTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APHTSALGIAAGVQG*EVRRHRMFMVVLQA Trigger: CGCCTGCAGTACTACCATGAACATTCTGTGCCTTCTCACTTCCCACCCTTGGACCCCCGCTGCGATCCCAAGAGCACTGGTGTGTGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS GCA 90 bp | CTTCCCCCAGCCAGATCTACGAGTGTGGGGAGCCAATCGGTGATGTaGATGAGTTCCCGGCTCTTCACGCCTTTCTGTTTCAGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPARSTSVGSQSVM*MSSRLFTPFCFSKG Trigger: CCCCTTGCTGAAACAGAAAGGCGTGAAGAGCCGGGAACTCATGCACATCACCGATTGGCTCCCCACACTCGTAGATCTGGCTGGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCAGGGGAGTAGGGGCCTGAGGTCTAGCCTGCCCAGAAATGGGCTCCAGATTGTCTTCCACATGTaGAAGCCATCCAGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSQGSRGLRSSLPRNGLQIVFHM*KPSRGL Trigger: CAAACCTCTGGATGGCTTCAACATGTGGAAGACAAT...CTGGAGCCCATTTCTGGGCAGGCTAGACCTCAGGCCCCTACTCCCCTGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS TCA 90 bp | GGGGGTGCTCTCGGGACACGTCGTGTCTTTCTTCAGGGTCCTGATTaGTATCAAAAAGCCAGAGAGTCTTGGTTGGTGGGTCCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGALGTRRVFLQGPD*YQKARESWLVGPLE Trigger: CTCCAGTGGACCCACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAGGACCCTGAAGAAAGACACGACGTGTCCCGAGAGCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS GCA 90 bp | AAGACTCAATCGGCGCACAGGCCTCGTGGGTGTAATAGTCTTCACTaGCTAGGAGGTATCCGAAGTAGGTATCGAATCCTCGGCGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KTQSAHRPRGCNSLH*LGGIRSRYRILGVS Trigger: CGACACGCCGAGGATTCGATACCTACTTCGGATACCTCCTAGGCAGTGAAGACTATTACACCCACGAGGCCTGTGCGCCGATTGAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CAA 90 bp | AGCTGTTCTGAGAACACTAAGGAACGATCAGGTAGGTGTTATGAAGTAGGGACCCACACACCAGTGCTCTaGGGATCGCAGCGGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCSENTKERSGRCYEVGTHTPVL*GSQRGS Trigger: GGACCCCCGCTGCGATCCCAAGAGCACTGGTGTGTG...GGTCCCTACTTCATAACACCTACCTGATCGTTCCTTAGTGTTCTCAGAACAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS GCA 90 bp | GTTCCAGAGCCCGTGGCTTTTCAAGGCTTTGGTGACGTTCCCCACTaGTTCATCCATGAGGGACACCATCCCTGCATAAATACGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPEPVAFQGFGDVPH*FIHEGHHPCINTSV Trigger: CACAGACGTATTTATGCAGGGATGGTGTCCCTCATGGATGAAGCAGTGGGGAACGTCACCAAAGCCTTGAAAAGCCACGGGCTCTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS CCA 90 bp | CTGCAGGGGATCGTGGACAGACTGGAAAGCAAGGTAGAGGAACAGTaGTTTCTCCGGTGGGTGGTTAGCTATGACGGTTGTAGCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQGIVDRLESKVEEQ*FLRWVVSYDGCSPF Trigger: AAAAGGGCTACAACCGTCATAGCTAACCACCCACCGGAGAAACCACTGTTCCTCTACCTTGCTTTCCAGTCTGTCCACGATCCCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CAA 90 bp | GCGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTGCTTGAGAAAACAGCATAGACGGAGTGGCCAGTTGTaGCCTCCAGACCTAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AKKCYPGLSCHCLRKQHRRSGQL*PPDLVC Trigger: GCAGACTAGGTCTGGAGGCAACAACTGGCCACTCCG...TCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS-3UTR CAA 90 bp | GACAGTCAAATAGTGTATCCTCATTCTCCAAGCCCAGAATCCAGAGCCCCAGAACCTCGGAGTGGCCAGTaGTTGCCTCCAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSQIVYPHSPSPESRAPEPRSGQ*LPPDLV Trigger: GACTAGGTCTGGAGGCAACAACTGGCCACTCCGAGG...TTCTGGGGCTCTGGATTCTGGGCTTGGAGAATGAGGATACACTATTTGACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
||
| CDS TCA 90 bp | ATGTGGGGGTGCTCTCGGGACACGTCGTGTCTTTCTTCAGGGTCCTaGTTGATATCAAAAAGCCAGAGAGTCTTGGTTGGTGGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: MWGCSRDTSCLSSGS*LISKSQRVLVGGST Trigger: AGTGGACCCACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAGGACCCTGAAGAAAGACACGACGTGTCCCGAGAGCACCCCCACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 90 bp | CTGATTGATATCAAAAAGCCAGAGAGTCTTGGTTGGTGGGTCCACTaGAGGTATCTCAGAGACGTTGGACTGAGACGGAGGCGGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: LIDIKKPESLGWWVH*RYLRDVGLRRRREP Trigger: TGGTTCCCGCCTCCGTCTCAGTCCAACGTCTCTGAGATACCTCCAGTGGACCCACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 90 bp | CATCCCTGCATAAATACGTCTGTGCTTATCTTGGATGAAGCCATATaGCTCCATGTACTCCTCAGGGACCTGCAGGGGATCGTGGACAGA | + |
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Preference number: 5 (lower is better) Translates to: HPCINTSVLILDEAI*LHVLLRDLQGIVDR Trigger: TCTGTCCACGATCCCCTGCAGGTCCCTGAGGAGTACATGGAGCCATATGGCTTCATCCAAGATAAGCACAGACGTATTTATGCAGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CAA 90 bp | GCGAAGAAGTGCTATCCTGGCCTTTCTTGCCACTGCTTGAGAAAACAGCATAGAAAGATGAAGACCGTGTaGTTCCAGAGCCCGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: AKKCYPGLSCHCLRKQHRKMKTV*FQSPWL Trigger: AAGCCACGGGCTCTGGAACAACACGGTCTTCATCTT...TCTATGCTGTTTTCTCAAGCAGTGGCAAGAAAGGCCAGGATAGCACTTCTTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CAA 90 bp | GAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGCCATTCAAAAAGCCAGAGAGTCTaGGTTGGTGGGTCCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: EAEFSFVYLQRPSQTCHSKSQRV*VGGSTG Trigger: TCCAGTGGACCCACCAACCAAGACTCTCTGGCTTTT...TGAATGGCAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 90 bp | TTTGGTGACGTTCCCCACTGCTTCATCCATGAGGGACACCATCCCTaGATAAATACGTCTGTGCTTATCTTGGATGAAGCCATATGGCTC | + |
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Preference number: 5 (lower is better) Translates to: FGDVPHCFIHEGHHP*INTSVLILDEAIWL Trigger: GAGCCATATGGCTTCATCCAAGATAAGCACAGACGTATTTATGCAGGGATGGTGTCCCTCATGGATGAAGCAGTGGGGAACGTCACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CAA 90 bp | AGAGGGGAGAGAGACCTCAGGCACAGGACAGTGAAGTCCAAAGGCATGACAGGAACGGTTGTAGCCCTTTaGGTAAATATGTTTGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: RGERDLRHRTVKSKGMTGTVVAL*VNMFVE Trigger: CTCAACAAACATATTTACCAAAAGGGCTACAACCGT...TCCTGTCATGCCTTTGGACTTCACTGTCCTGTGCCTGAGGTCTCTCTCCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS-3UTR CAA 90 bp | TTCCCGGGAAGCAGAATTCTCTTTTGTCTACCTGCAGAGGCCATCACAGACCTGGAAAAGAATCGTCCTTaGCTGGAGTCATGTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: FPGSRILFCLPAEAITDLEKNRP*LESCSC Trigger: GCAAGAACATGACTCCAGCAAAGGACGATTCTTTTC...CAGGTCTGTGATGGCCTCTGCAGGTAGACAAAAGAGAATTCTGCTTCCCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 90 bp | GGGTGGCCCGTGAGGAGTTTCCAATTTTTGTATCTGATCCCAGCATaGATAGACGTGTTAAAGGCAGAATGTTCTAACGGAAAAGAATCG | + |
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Preference number: 5 (lower is better) Translates to: GWPVRSFQFLYLIPA*IDVLKAECSNGKES Trigger: CGATTCTTTTCCGTTAGAACATTCTGCCTTTAACACGTCTATCCATGCTGGGATCAGATACAAAAATTGGAAACTCCTCACGGGCCACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 72 bp | TTCCAGCCCAGGTCGTCCGCCAGCACGAAGACCACATaGGGAGGCTGGGTAGCTCCGGAGGCCCGGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: FQPRSSASTKTT*GGWVAPEARAG Trigger: GCCGGCCCGGGCCTCCGGAGCTACCCAGCCTCCGCATGTGGTCTTCGTGCTGGCGGACGACCTGGGCTGGAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | AGGTCGTCCGCCAGCACGAAGACCACATGCGGAGGCTaGGTAGCTCCGGAGGCCCGGGCCGGCGACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSASTKTTCGG*VAPEARAGDSS Trigger: GCTGCTGTCGCCGGCCCGGGCCTCCGGAGCTACCCAGCCTCCGCATGTGGTCTTCGTGCTGGCGGACGACCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS TCA 72 bp | CGCCGGCCGCCAGCGCATCCAGGTGCGGCGTGCGGATaGCCGAGCCGTGAAAACCCAAGTCGTTCCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RRPPAHPGAACG*PSRENPSRSSP Trigger: TGGGCTGGAACGACTTGGGTTTTCACGGCTCGGTCATCCGCACGCCGCACCTGGATGCGCTGGCGGCCGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS TCA 72 bp | AGCGCATCCAGGTGCGGCGTGCGGATGACCGAGCCGTaGAAACCCAAGTCGTTCCAGCCCAGGTCGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SASRCGVRMTEP*KPKSFQPRSSA Trigger: GGCGGACGACCTGGGCTGGAACGACTTGGGTTTTCACGGCTCGGTCATCCGCACGCCGCACCTGGATGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 72 bp | CCCGGCTCTTCACGCCTTTCTGTTTCAGCAAGGGGCTaGCCACGAAGCCCGTTCCTCGGATGCCCCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGSSRLSVSARG*PRSPFLGCPLP Trigger: GGGAAGGGGGCATCCGAGGAACGGGCTTCGTGGCAAGCCCCTTGCTGAAACAGAAAGGCGTGAAGAGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 72 bp | CCGGCTCTTCACGCCTTTCTGTTTCAGCAAGGGGCTTaGCACGAAGCCCGTTCCTCGGATGCCCCCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PALHAFLFQQGA*HEARSSDAPFP Trigger: TGGGAAGGGGGCATCCGAGGAACGGGCTTCGTGGCAAGCCCCTTGCTGAAACAGAAAGGCGTGAAGAGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 72 bp | TGCAGGCGGGAAAGAAGGTTCTGGACGATGTGGGGGTaGTCTCGGGACACGTCGTGTCTTTCTTCAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CRRERRFWTMWG*SRDTSCLSSGS Trigger: GGACCCTGAAGAAAGACACGACGTGTCCCGAGAGCACCCCCACATCGTCCAGAACCTTCTTTCCCGCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 72 bp | TCCCACAGGGTCCCCTTCCTTCCTCGGAGTGGCCAGTaGTTGCCTCCAGACCTAGTCTGCCCACCGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: SHRVPFLPRSGQ*LPPDLVCPPLS Trigger: AGATAACGGTGGGCAGACTAGGTCTGGAGGCAACAACTGGCCACTCCGAGGAAGGAAGGGGACCCTGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | TGGTTGGTGGGTCCACTGGAGGTATCTCAGAGACGTTaGACTGAGACGGAGGCGGGAACCAGTAACCACAGC | + |
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Preference number: 6 (lower is better) Translates to: WLVGPLEVSQRR*TETEAGTSNHS Trigger: GCTGTGGTTACTGGTTCCCGCCTCCGTCTCAGTCCAACGTCTCTGAGATACCTCCAGTGGACCCACCAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 72 bp | CCTCGGAGTGGCCAGTTGTTGCCTCCAGACCTAGTCTaGCCACCGTTATCTGTGGAGAAGATGAAGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: PRSGQLLPPDLV*PPLSVEKMKTV Trigger: CACGGTCTTCATCTTCTCCACAGATAACGGTGGGCAGACTAGGTCTGGAGGCAACAACTGGCCACTCCGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | ACCAGTGCTCTTGGGATCGCAGCGGGGGTCCAAGGGTaGGAAGTGAGAAGGCACAGAATGTTCATGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: TSALGIAAGVQG*EVRRHRMFMVV Trigger: TACTACCATGAACATTCTGTGCCTTCTCACTTCCCACCCTTGGACCCCCGCTGCGATCCCAAGAGCACTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 90 bp | AAGATGAAGACCGTGTTGTTCCAGAGCCCGTGGCTTTTCAAGGCTTaGGTGACGTTCCCCACTGCTTCATCCATGAGGGACACCATCCCT | + |
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Preference number: 6 (lower is better) Translates to: KMKTVLFQSPWLFKA*VTFPTASSMRDTIP Trigger: AGGGATGGTGTCCCTCATGGATGAAGCAGTGGGGAACGTCACCAAAGCCTTGAAAAGCCACGGGCTCTGGAACAACACGGTCTTCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 90 bp | TCCACTCTCGGGGATGGGTGTCCTTCACTGATTGTCTTCCACATGTaGAAGCCATCCAGAGGTTTGGTTCCATTAGTGCTTCCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: STLGDGCPSLIVFHM*KPSRGLVPLVLPPA Trigger: GGCTGGGGGAAGCACTAATGGAACCAAACCTCTGGATGGCTTCAACATGTGGAAGACAATCAGTGAAGGACACCCATCCCCGAGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 72 bp | CCCGTGGCTTTTCAAGGCTTTGGTGACGTTCCCCACTaGTTCATCCATGAGGGACACCATCCCTGCATAAAT | + |
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Preference number: 6 (lower is better) Translates to: PVAFQGFGDVPH*FIHEGHHPCIN Trigger: ATTTATGCAGGGATGGTGTCCCTCATGGATGAAGCAGTGGGGAACGTCACCAAAGCCTTGAAAAGCCACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | ATCAAAAAGCCAGAGAGTCTTGGTTGGTGGGTCCACTaGAGGTATCTCAGAGACGTTGGACTGAGACGGAGG | + |
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Preference number: 6 (lower is better) Translates to: IKKPESLGWWVH*RYLRDVGLRRR Trigger: CCTCCGTCTCAGTCCAACGTCTCTGAGATACCTCCAGTGGACCCACCAACCAAGACTCTCTGGCTTTTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 90 bp | TGTCCTTCACTGATTGTCTTCCACATGTTGAAGCCATCCAGAGGTTaGGTTCCATTAGTGCTTCCCCCAGCCAGATCTACGAGTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CPSLIVFHMLKPSRG*VPLVLPPARSTSVG Trigger: CCCCACACTCGTAGATCTGGCTGGGGGAAGCACTAATGGAACCAAACCTCTGGATGGCTTCAACATGTGGAAGACAATCAGTGAAGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | ATCGTGGACAGACTGGAAAGCAAGGTAGAGGAACAGTaGTTTCTCCGGTGGGTGGTTAGCTATGACGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: IVDRLESKVEEQ*FLRWVVSYDGC Trigger: ACAACCGTCATAGCTAACCACCCACCGGAGAAACCACTGTTCCTCTACCTTGCTTTCCAGTCTGTCCACGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS TCA 72 bp | CTCGGGACACGTCGTGTCTTTCTTCAGGGTCCTGATTaGTATCAAAAAGCCAGAGAGTCTTGGTTGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LGTRRVFLQGPD*YQKARESWLVG Trigger: ACCCACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAGGACCCTGAAGAAAGACACGACGTGTCCCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS GCA 72 bp | GTTCCCCACTGCTTCATCCATGAGGGACACCATCCCTaGATAAATACGTCTGTGCTTATCTTGGATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VPHCFIHEGHHP*INTSVLILDEA Trigger: GGCTTCATCCAAGATAAGCACAGACGTATTTATGCAGGGATGGTGTCCCTCATGGATGAAGCAGTGGGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 72 bp | CTGATTGTCTTCCACATGTTGAAGCCATCCAGAGGTTaGGTTCCATTAGTGCTTCCCCCAGCCAGATCTACG | + |
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Preference number: 6 (lower is better) Translates to: LIVFHMLKPSRG*VPLVLPPARST Trigger: CGTAGATCTGGCTGGGGGAAGCACTAATGGAACCAAACCTCTGGATGGCTTCAACATGTGGAAGACAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 72 bp | CCACAGCCTGGGTGGCCCGTGAGGAGTTTCCAATTTTaGTATCTGATCCCAGCATGGATAGACGTGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: PQPGWPVRSFQF*YLIPAWIDVLK Trigger: CTTTAACACGTCTATCCATGCTGGGATCAGATACAAAAATTGGAAACTCCTCACGGGCCACCCAGGCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS TCA 72 bp | CCATCCCTGCATAAATACGTCTGTGCTTATCTTGGATaGAGCCATATGGCTCCATGTACTCCTCAGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: PSLHKYVCAYLG*SHMAPCTPQGP Trigger: AGGTCCCTGAGGAGTACATGGAGCCATATGGCTTCATCCAAGATAAGCACAGACGTATTTATGCAGGGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS TCA 72 bp | TGCTCTCGGGACACGTCGTGTCTTTCTTCAGGGTCCTaGTTGATATCAAAAAGCCAGAGAGTCTTGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: CSRDTSCLSSGS*LISKSQRVLVG Trigger: ACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAGGACCCTGAAGAAAGACACGACGTGTCCCGAGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | ATAAATACGTCTGTGCTTATCTTGGATGAAGCCATATaGCTCCATGTACTCCTCAGGGACCTGCAGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: INTSVLILDEAI*LHVLLRDLQGI Trigger: GATCCCCTGCAGGTCCCTGAGGAGTACATGGAGCCATATGGCTTCATCCAAGATAAGCACAGACGTATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | CTGATTGATATCAAAAAGCCAGAGAGTCTTGGTTGGTaGGTCCACTGGAGGTATCTCAGAGACGTTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: LIDIKKPESLGW*VHWRYLRDVGL Trigger: CAGTCCAACGTCTCTGAGATACCTCCAGTGGACCCACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | GTCCTGATTGATATCAAAAAGCCAGAGAGTCTTGGTTaGTGGGTCCACTGGAGGTATCTCAGAGACGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLIDIKKPESLG*WVHWRYLRDVG Trigger: TCCAACGTCTCTGAGATACCTCCAGTGGACCCACCAACCAAGACTCTCTGGCTTTTTGATATCAATCAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 72 bp | GGACACCATCCCTGCATAAATACGTCTGTGCTTATCTaGGATGAAGCCATATGGCTCCATGTACTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GHHPCINTSVLI*DEAIWLHVLLR Trigger: CCTGAGGAGTACATGGAGCCATATGGCTTCATCCAAGATAAGCACAGACGTATTTATGCAGGGATGGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CAA 72 bp | GGGGATGGGTGTCCTTCACTGATTGTCTTCCACATGTaGAAGCCATCCAGAGGTTTGGTTCCATTAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GDGCPSLIVFHM*KPSRGLVPLVL Trigger: AAGCACTAATGGAACCAAACCTCTGGATGGCTTCAACATGTGGAAGACAATCAGTGAAGGACACCCATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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| CDS CCA 72 bp | GTGAGGAGTTTCCAATTTTTGTATCTGATCCCAGCATaGATAGACGTGTTAAAGGCAGAATGTTCTAACGGA | + |
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Preference number: 6 (lower is better) Translates to: VRSFQFLYLIPA*IDVLKAECSNG Trigger: TCCGTTAGAACATTCTGCCTTTAACACGTCTATCCATGCTGGGATCAGATACAAAAATTGGAAACTCCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091403.6 |
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