Pregenerated sensors for ARSA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022620Ensembl transcript IDs: ENSMUST00000165199.8, ENSMUST00000168270.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGCTCGGCTGACAGCAGATCTGTAGGGCAGGGTCCTCGCCCTTaGCTATCTGGCTGGGGCCAAAGGTCATGGCTGCATCGTACTGGG | + |
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Preference number: 1 (lower is better) Translates to: CSSADSRSVGQGPRP*LSGWGQRSWLHRTG Trigger: CCCAGTACGATGCAGCCATGACCTTTGGCCCCAGCCAGATAGCCAAGGGCGAGGACCCTGCCCTACAGATCTGCTGTCAGCCGAGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CCA 90 bp | GAGATAAGTCGTAGAGCAGTGGGGGCTCATGAGCCGTCAGACGGTTaGCAGCATGACAGGCAGGATCTGAAGTGGTGTCACTGTGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: EISRRAVGAHEPSDG*QHDRQDLKWCHCGR Trigger: CCGCCCACAGTGACACCACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCTGACGGCTCATGAGCCCCCACTGCTCTACGACTTATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR GCA 90 bp | AGGGTCCTCGCCCTTGGCTATCTGGCTGGGGCCAAAGGTCATGGCTaGATCGTACTGGGCCTTGAGGAGTTGGATGTGTTTCAAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: RVLALGYLAGAKGHG*IVLGLEELDVFQSL Trigger: CAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTTGGCCCCAGCCAGATAGCCAAGGGCGAGGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR TCA 90 bp | CTATCTGGCTGGGGCCAAAGGTCATGGCTGCATCGTACTGGGCCTTaGGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCTGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LSGWGQRSWLHRTGP*GVGCVSKPGGLLGR Trigger: TCTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTTGGCCCCAGCCAGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CCA 90 bp | AGTGAGCCCCATGAGGCAGTCTCAGAAGCTGCTGATGGTCCTTCCTaGGATCTAGCAGGGTCCCCAGGTCCTTTAACTCTACCCGGAATG | + |
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Preference number: 1 (lower is better) Translates to: SEPHEAVSEAADGPS*DLAGSPGPLTLPGM Trigger: CATTCCGGGTAGAGTTAAAGGACCTGGGGACCCTGCTAGATCCCAGGAAGGACCATCAGCAGCTTCTGAGACTGCCTCATGGGGCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CCA 90 bp | CCCTTGGCTATCTGGCTGGGGCCAAAGGTCATGGCTGCATCGTACTaGGCCTTGAGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PLAIWLGPKVMAASY*ALRSWMCFKAWRAS Trigger: AGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTTGGCCCCAGCCAGATAGCCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CCA 90 bp | CTGGGCCTTGAGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCTaGGGAGACCCCCTCTATACTTTCCAAAACATTGTAGTTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: LGLEELDVFQSLEGF*GDPLYTFQNIVVLP Trigger: GGGGAGAACTACAATGTTTTGGAAAGTATAGAGGGGGTCTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CCA 90 bp | CAGCTGATTTCTTTAAAGAACCAAGCTGACCAGTTCCAGGGCCTCTaGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: QLISLKNQADQFQGL*HCFLRKACLPGALH Trigger: ATGCAAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTGGTCAGCTTGGTTCTTTAAAGAAATCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR TCA 90 bp | TGTAGAAAATTACTTGAAGTATGCACAAAGGAGAAATTCAGAGCTTaGGAGACAAGTGAGCCCCATGAGGCAGTCTCAGAAGCTGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: CRKLLEVCTKEKFRA*ETSEPHEAVSEAAD Trigger: ATCAGCAGCTTCTGAGACTGCCTCATGGGGCTCACTTGTCTCTCAAGCTCTGAATTTCTCCTTTGTGCATACTTCAAGTAATTTTCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGGTGGGGAGTGCAGCTCGGCTGACAGCAGATCTGTAGGGCAGGGTCCTAGACGGTTGGCAGCATaGCAGGCAGGATCTGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: RQGGECSSADSRSVGQGPRRLAA*QAGSEV Trigger: CACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCT...AGGACCCTGCCCTACAGATCTGCTGTCAGCCGAGCTGCACTCCCCACCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CAA 90 bp | GCTATCTGGCTGGGGCCAAAGGTCATGGCTGCATCGTACTGGGCCTaGAGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AIWLGPKVMAASYWA*RSWMCFKAWRASGE Trigger: CTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTTGGCCCCAGCCAGATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCTGGGGAGACCCCCTCAGGCAGGATCTGAAGTaGTGTCACTGTGGGCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LEELDVFQSLEGFWGDPLRQDLK*CHCGRS Trigger: GCTCCGCCCACAGTGACACCACTTCAGATCCTGCCT...GAGGGGGTCTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTCCCTGTCCCTCTGGTaGACCATCACACACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QFQGLWHCFLRKACLPGASLSLW*TITHSG Trigger: TCCTGAGTGTGTGATGGTTCACCAGAGGGACAGGGA...AGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGTCATGGCTGCATCGTACTGGGCCTTGAGGAGTTGGATGTGTTTCAAAATGACAGGCAGGATCTaGAGTGGTGTCACTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PKVMAASYWALRSWMCFKMTGRI*SGVTVG Trigger: GCCCACAGTGACACCACTTCAGATCCTGCCTGTCAT...TTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTCCACGAGATTCCCTATaGGTCAATGTCCTTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: QFQGLWHCFLRKACLPGAPRDSL*VNVLVL Trigger: CAAGACAAGGACATTGACGCATAGGGAATCTCGTGG...AGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CAA 90 bp | GTTCAAATCCTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTaGGAAAGGTCCACGAGATTCCCTATGCGTCAATGTCCTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VQILAQALSGKVASD*ERSTRFPMRQCPCL Trigger: AAGACAAGGACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAGGATTTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR TCA 72 bp | AGCCGTCAGACGGTTGGCAGCATGACAGGCAGGATCTaGAGTGGTGTCACTGTGGGCGGAGCCTGGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: SRQTVGSMTGRI*SGVTVGGAWGW Trigger: CCATCCCCAGGCTCCGCCCACAGTGACACCACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCTGACGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CCA 72 bp | CGTAGAGCAGTGGGGGCTCATGAGCCGTCAGACGGTTaGCAGCATGACAGGCAGGATCTGAAGTGGTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RRAVGAHEPSDG*QHDRQDLKWCH Trigger: GTGACACCACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCTGACGGCTCATGAGCCCCCACTGCTCTACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTAAGGTGGCATCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAAGGTCCTGGGCTACCCTaGAAGGACCCCCGTGATTTC | + |
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Preference number: 3 (lower is better) Translates to: SGKVASDLERSTRFPMRQGPGLP*KDPRDF Trigger: GAAATCACGGGGGTCCTTCAAGGGTAGCCCAGGACC...TTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGATGCCACCTTACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR TCA 72 bp | TGGGGCCAAAGGTCATGGCTGCATCGTACTGGGCCTTaGGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: WGQRSWLHRTGP*GVGCVSKPGGL Trigger: AAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTTGGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR CCA 72 bp | TACTGGGCCTTGAGGAGTTGGATGTGTTTCAAAGCCTaGAGGGCTTCTGGGGAGACCCCCTCTATACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: YWALRSWMCFKA*RASGETPSILS Trigger: GGAAAGTATAGAGGGGGTCTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR GCA 72 bp | CTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTaGTTTGCATCTTTAGGGTTCCTCTGCCCTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: LALLLEESLSSR*FASLGFLCPHH Trigger: GTGGTGAGGGCAGAGGAACCCTAAAGATGCAAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CCA 72 bp | GTGAAGGGACATGTCTTCGCTTCAGCGGTGTGTCCATaGACACACGCAGATCACCAGGGTGGGACAAATTTT | + |
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Preference number: 3 (lower is better) Translates to: VKGHVFASAVCP*THADHQGGTNF Trigger: AAAATTTGTCCCACCCTGGTGATCTGCGTGTGTCCATGGACACACCGCTGAAGCGAAGACATGTCCCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR TCA 72 bp | AAGCTGACCAGTTCCAGGGCCTCTGGCATTGCTTCTTaGGGAAAGCCTGTCTTCCAGGTGCTTTGCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: KLTSSRASGIAS*GKPVFQVLCIF Trigger: AAAGATGCAAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTGGTCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCTGATTTCTTTAAAGAACCAAGCTGACCAGTTCCAGGGCCTCTGGCATTGCCCCAGTTCCTGGCACTaGAACTCATTACCGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: QLISLKNQADQFQGLWHCPSSWH*NSLPVS Trigger: AGAAACCGGTAATGAGTTCAAGTGCCAGGAACTGGG...GCAATGCCAGAGGCCCTGGAACTGGTCAGCTTGGTTCTTTAAAGAAATCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR GCA 72 bp | CAGATCACCAGGGTGGGACAAATTTTAAACCCAGGGTaGCTGGGTTCAAATCCTAGCTCAAGCTCTTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: QITRVGQILNPG*LGSNPSSSSFW Trigger: CCAGAAAGAGCTTGAGCTAGGATTTGAACCCAGGCACCCTGGGTTTAAAATTTGTCCCACCCTGGTGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CCA 72 bp | TCTTTAAAGAACCAAGCTGACCAGTTCCAGGGCCTCTaGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SLKNQADQFQGL*HCFLRKACLPG Trigger: ACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTGGTCAGCTTGGTTCTTTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CCA 72 bp | GAGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCTaGGGAGACCCCCTCTATACTTTCCAAAACATTGTA | + |
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Preference number: 3 (lower is better) Translates to: EELDVFQSLEGF*GDPLYTFQNIV Trigger: TACAATGTTTTGGAAAGTATAGAGGGGGTCTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| 3UTR TCA 72 bp | TTACTTGAAGTATGCACAAAGGAGAAATTCAGAGCTTaGGAGACAAGTGAGCCCCATGAGGCAGTCTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLEVCTKEKFRA*ETSEPHEAVSE Trigger: TTCTGAGACTGCCTCATGGGGCTCACTTGTCTCTCAAGCTCTGAATTTCTCCTTTGTGCATACTTCAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | AGACAGGGTGGGGAGTGCAGCTCGGCTGACAGCAGATCTGTAGGGCAGGGTCCTCCCATGGATCTCGTCTaGGTAGGGCGGGTAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RQGGECSSADSRSVGQGPPMDLV*VGRVEE Trigger: TTCTTCTACCCGCCCTACCCAGACGAGATCCATGGG...AGGACCCTGCCCTACAGATCTGCTGTCAGCCGAGCTGCACTCCCCACCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| CDS-3UTR TCA 90 bp | AGACAGGGTGGGGAGTGCAGCTCGGCTGACAGCAGATCTGTAGGGCAGGGTCCTGCAGGGTACCCTGGGTaGAGAAATGAGCCTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: RQGGECSSADSRSVGQGPAGYPG*RNEPCI Trigger: AATACAAGGCTCATTTCTTCACCCAGGGTACCCTGC...AGGACCCTGCCCTACAGATCTGCTGTCAGCCGAGCTGCACTCCCCACCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| CDS-3UTR CCA 90 bp | GTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTTCAGGGTCCTCGCCCTTaGCTATCTGGCTGGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VPGPLALLLEESLSSRCFQGPRP*LSGWGQ Trigger: TTGGCCCCAGCCAGATAGCCAAGGGCGAGGACCCTG...AAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | GTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTTTCAGGACTGGGAGCCTaGGCAGTGGCAGCAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: VPGPLALLLEESLSSRCFSGLGA*AVAADR Trigger: CCTGTCTGCTGCCACTGCCCAGGCTCCCAGTCCTGA...AAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR TCA 90 bp | TCTGGTAAGGTGGCATCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAATCCAGGGTACATGCCTaGTCGAACTGGGAGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGKVASDLERSTRFPMRQSRVHA*SNWEPA Trigger: GGCCGGCTCCCAGTTCGATCAGGCATGTACCCTGGA...TTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGATGCCACCTTACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | AAGCCTGTCTTCCAGGTGCTTTGCATCTTTAGGGTTCCTCTGCCCTCACCACTCAAGGGCAAGCCCCCTTaGGAACTGGGCCCCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: KPVFQVLCIFRVPLPSPLKGKPP*ELGPRT Trigger: AGTTCTGGGGCCCAGTTCCCAAGGGGGCTTGCCCTT...GAGTGGTGAGGGCAGAGGAACCCTAAAGATGCAAAGCACCTGGAAGACAGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGATTTCTTTAAAGAACCAAGCTGACCAGTTCCAGGGCCTCTGGCATTGCGGCAGCCAAGGGGGCTaGGCCTCCACTGTCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QLISLKNQADQFQGLWHCGSQGG*ASTVRL Trigger: CAACCTGACAGTGGAGGCCCAGCCCCCTTGGCTGCC...GCAATGCCAGAGGCCCTGGAACTGGTCAGCTTGGTTCTTTAAAGAAATCAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | CTTGAGGAAAGCCTGTCTTCCAGGTGCTTTGCATCTTTAGGGTTCCTCTGCCCTAAGAACGGTCGGCCCTaGCGCTGGGCATCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: LEESLSSRCFASLGFLCPKNGRP*RWASAM Trigger: CATGGCTGATGCCCAGCGCCAGGGCCGACCGTTCTT...AGGGCAGAGGAACCCTAAAGATGCAAAGCACCTGGAAGACAGGCTTTCCTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | CCCCACCCCCAGTTCCTGGCACTTGAACTCATTACCGGTTTCTGTGAAGGGACAAGGCAGGATCTGAAGTaGTGTCACTGTGGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PHPQFLALELITGFCEGTRQDLK*CHCGRS Trigger: GCTCCGCCCACAGTGACACCACTTCAGATCCTGCCT...TGTCCCTTCACAGAAACCGGTAATGAGTTCAAGTGCCAGGAACTGGGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR GCA 90 bp | TCTGGTAAGGTGGCATCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAACGGCCCGAGATGGCGTaGACAGAGACACAGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SGKVASDLERSTRFPMRQRPEMA*TETQAH Trigger: ATGTGCCTGTGTCTCTGTGCACGCCATCTCGGGCCG...TTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGATGCCACCTTACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | TCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAATGTCCTTGTCTTGTACAGGAAGGCCCCCTCTaGCCCCACTCCAAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SDLERSTRFPMRQCPCLVQEGPL*PHSKMP Trigger: TGGCATCTTGGAGTGGGGCCAGAGGGGGCCTTCCTG...TACAAGACAAGGACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CAA 72 bp | AAAGGTCATGGCTGCATCGTACTGGGCCTTGAGGAGTaGGATGTGTTTCAAAGCCTGGAGGGCTTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KGHGCIVLGLEE*DVFQSLEGFWG Trigger: TCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCAGTACGATGCAGCCATGACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| CDS-3UTR TCA 90 bp | GGCATCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAATGTCCTTGTCTATGACAGGCAGGATCTaGAGTGGTGTCACTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GIGLGKVHEIPYASMSLSMTGRI*SGVTVG Trigger: GCCCACAGTGACACCACTTCAGATCCTGCCTGTCAT...AGACAAGGACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTCAAATCCTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTTGGAACAGCAGGATGTTAGGTaGGCTGGCAGTGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: WVQILAQALSGKVASDLEQQDVR*AGSAQA Trigger: GGCCTGAGCACTGCCAGCCCACCTAACATCCTGCTG...TTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAGGATTTGAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | GTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTTCTGGTCATGGGAATATaGGATGCCCAGGAATCGGTG | + |
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Preference number: 4 (lower is better) Translates to: VPGPLALLLEESLSSRCFLVMGI*DAQESV Trigger: CACCGATTCCTGGGCATCCCATATTCCCATGACCAG...AAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | AAGAACCAAGCTGACCAGTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCATGTGTTTCAAAGCCTaGAGGGCTTCTGGGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: KNQADQFQGLWHCFLRKAMCFKA*RASGET Trigger: GGTCTCCCCAGAAGCCCTCCAGGCTTTGAAACACAT...GGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTGGTCAGCTTGGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CAA 72 bp | CAAGCTGACCAGTTCCAGGGCCTCTGGCATTGCTTCTaGAGGAAAGCCTGTCTTCCAGGTGCTTTGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QADQFQGLWHCF*RKACLPGALHL Trigger: AAGATGCAAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAACTGGTCAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR GCA 90 bp | TGGGTTCAAATCCTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTTGGAAGGTCACAGCCACCTTTaGAGGGGATGTCTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: WVQILAQALSGKVASDLEGHSHL*RGCLVG Trigger: TCCCACCAGACATCCCCTGCAAAGGTGGCTGTGACC...TTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAGGATTTGAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTCAAATCCTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTTGGAACCTTGGCTATCTGGCTaGGGCCAAAGGTCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WVQILAQALSGKVASDLEPWLSG*GQRSWL Trigger: CAGCCATGACCTTTGGCCCCAGCCAGATAGCCAAGG...TTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAGGATTTGAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | TCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAATGTCCTTGTCTTGTATCGCCCTTGGCTATCTaGCTGGGGCCAAAGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SDLERSTRFPMRQCPCLVSPLAI*LGPKVM Trigger: CATGACCTTTGGCCCCAGCCAGATAGCCAAGGGCGA...TACAAGACAAGGACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR TCA 90 bp | TCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAATGTCCTTGTCTTGTACCACCTTCAGCCAACTaGTCCAGGTTAGGGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SDLERSTRFPMRQCPCLVPPSAN*SRLGVV Trigger: TACCACCCCTAACCTGGATCAGTTGGCTGAAGGTGG...TACAAGACAAGGACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR TCA 90 bp | TCGGACTTGGAAAGGTCCACGAGATTCCCTATGCGTCAATGTCCTTGTCTTGTAAAGCACGTTAGGTTCTaGCAGGGACCCTGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLERSTRFPMRQCPCLVKHVRF*QGPWSW Trigger: CCATGACCAGGGTCCCTGTCAGAACCTAACGTGCTT...TACAAGACAAGGACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCACGTCTCAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACTGGGAGCCTGGGCAGTaGCAGCAGACAGGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISTSQVSAGVITLPDTNYWEPGQ*QQTGWG Trigger: TCCCCACCCTGTCTGCTGCCACTGCCCAGGCTCCCA...GTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTGAGACGTGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| 3UTR CAA 72 bp | CTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTaGGAAAGGTCCACGAGATTCCCTATGCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQALSGKVASD*ERSTRFPMRQC Trigger: ACATTGACGCATAGGGAATCTCGTGGACCTTTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCCCTAGACAGGGTGGGGAGTaGAGCTCGGCTGACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSAGVITLPDTNYTLVPRQGGE*SSADSR Trigger: TCTGCTGTCAGCCGAGCTGCACTCCCCACCCTGTCT...AGGGACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTCAAATCCTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTTGGAATGGGCCTTGAGGAGTTaGATGTGTTTCAAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVQILAQALSGKVASDLEWALRS*MCFKAW Trigger: CCAGGCTTTGAAACACATCCAACTCCTCAAGGCCCA...TTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAGGATTTGAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR GCA 90 bp | GTCTCAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTGGCCCCACTCCAAGATaGCACTTGCCAGCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSLSWCYYITRYKLHTCGPTPR*HLPAIP Trigger: AGGGATGGCTGGCAAGTGGCATCTTGGAGTGGGGCC...ACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCCCTAGCCTGGAGGGCTTCTaGGGAGACCCCCTCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: QVSAGVITLPDTNYTLVPSLEGF*GDPLYT Trigger: AGTATAGAGGGGGTCTCCCCAGAAGCCCTCCAGGCT...AGGGACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCCCTAGACGGTTGGCAGCATaGCAGGCAGGATCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSAGVITLPDTNYTLVPRRLAA*QAGSEV Trigger: CACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCT...AGGGACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCCCTGGCAGTGCTCAGGCCTaGAGCCAATGCCAAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSAGVITLPDTNYTLVPGSAQA*SQCQKE Trigger: CTCTTTTTGGCATTGGCTGCAGGCCTGAGCACTGCC...AGGGACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCCCTCCCATGGATCTCGTCTaGGTAGGGCGGGTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVSAGVITLPDTNYTLVPPMDLV*VGRVEE Trigger: TTCTTCTACCCGCCCTACCCAGACGAGATCCATGGG...AGGGACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR TCA 90 bp | ATTAGCACGTCTCAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACGGGCGGAGCCCTGGGTaGAGAAATGAGCCTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ISTSQVSAGVITLPDTNYGRSPG*RNEPCI Trigger: AATACAAGGCTCATTTCTTCACCCAGGGCTCCGCCC...GTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTGAGACGTGCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCCCTCATCGTACTGGGCCTTaGGGAGTTGGATGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSAGVITLPDTNYTLVPHRTGP*GVGCVS Trigger: TGAAACACATCCAACTCCTCAAGGCCCAGTACGATG...AGGGACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS TCA 90 bp | CAAGCCCCCTTGGGAACTGGGCCCCAGAACTCCAGGGTACATGCCTaGTCGAACTGGGAGCCGGCCAGTCAGGAGGGCGGCCCGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: QAPLGTGPQNSRVHA*SNWEPASQEGGPRW Trigger: CCATCTCGGGCCGCCCTCCTGACTGGCCGGCTCCCAGTTCGATCAGGCATGTACCCTGGAGTTCTGGGGCCCAGTTCCCAAGGGGGCTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | CACACTCAGGACAGGGCTAGGGGTCCTGGGCTACCCTTGAAGGACCCCCGTGATGCAGGGTCCTCGCCCTaGGCTATCTGGCTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTQDRARGPGLPLKDPRDAGSSP*AIWLGP Trigger: TGGCCCCAGCCAGATAGCCAAGGGCGAGGACCCTGC...ATCACGGGGGTCCTTCAAGGGTAGCCCAGGACCCCTAGCCCTGTCCTGAGTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 90 bp | GCCAAGGGGGCTGGGCCTCCACTGTCAGGTTGGCCAGTAGTGGGATaGGAACAAGGCCTTGGTCACAGCCACCTTTGCAGGGGATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKGAGPPLSGWPVVG*EQGLGHSHLCRGCL Trigger: CAGACATCCCCTGCAAAGGTGGCTGTGACCAAGGCCTTGTTCCCATCCCACTACTGGCCAACCTGACAGTGGAGGCCCAGCCCCCTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 90 bp | GAGAAAGACACATACCGGGCCTCCAGTCCAGGCAGCCAAGGGGGCTaGGCCTCCACTGTCAGGTTGGCCAGTAGTGGGATGGGAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKDTYRASSPGSQGG*ASTVRLASSGMGTR Trigger: CCTTGTTCCCATCCCACTACTGGCCAACCTGACAGTGGAGGCCCAGCCCCCTTGGCTGCCTGGACTGGAGGCCCGGTATGTGTCTTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | CTTGAGGAGTTGGATGTGTTTCAAAGCCTGGAGGGCTTCTGGGGAGACCCCCTCCCATCCAAGGTGACGTaGGGCAGCGGAGCCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEELDVFQSLEGFWGDPLPSKVT*GSGAPV Trigger: GACCGGGGCTCCGCTGCCCAACGTCACCTTGGATGG...GAGGGGGTCTCCCCAGAAGCCCTCCAGGCTTTGAAACACATCCAACTCCTCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGTGGGGGCTCATGAGCCGTCAGACGGTTGGCAGCATGACAGGCAGGATCGACTTCCGTGGGCTCTaGCCTGTGCCTAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQWGLMSRQTVGSMTGRIDFRGL*PVPSSK Trigger: CTTGCTGCTAGGCACAGGCAAGAGCCCACGGAAGTC...GATCCTGCCTGTCATGCTGCCAACCGTCTGACGGCTCATGAGCCCCCACTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168270.2 |
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| CDS GCA 90 bp | AGCACGTTAGGTTCTGACAGGGACCCTGGTCATGGGAATATGGGATaGCCAGGAATCGGTGGAAGCCCTGATGCGGGGGCAGGAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STLGSDRDPGHGNMG*PGIGGSPDAGAGRP Trigger: GGGCCTTCCTGCCCCCGCATCAGGGCTTCCACCGATTCCTGGGCATCCCATATTCCCATGACCAGGGTCCCTGTCAGAACCTAACGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS TCA 90 bp | GGGCTCATGAGCCGTCAGACGGTTGGCAGCATGACAGGCAGGATCTaGAGTGGTGTCACTGTGGGCGGAGCCCTGGGTGAAGAAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLMSRQTVGSMTGRI*SGVTVGGALGEEMS Trigger: GCTCATTTCTTCACCCAGGGCTCCGCCCACAGTGACACCACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCTGACGGCTCATGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 90 bp | GCCAGGACTTCGGCTAAAGTCACCTCCTCCAAGGGCAAGCCCCCTTaGGAACTGGGCCCCAGAACTCCAGGGTACATGCCTGATCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ARTSAKVTSSKGKPP*ELGPRTPGYMPDRT Trigger: AGTTCGATCAGGCATGTACCCTGGAGTTCTGGGGCCCAGTTCCCAAGGGGGCTTGCCCTTGGAGGAGGTGACTTTAGCCGAAGTCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 90 bp | GCCTCCACTGTCAGGTTGGCCAGTAGTGGGATGGGAACAAGGCCTTaGTCACAGCCACCTTTGCAGGGGATGTCTGGTGGGAAGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASTVRLASSGMGTRP*SQPPLQGMSGGKHV Trigger: AACGTGCTTCCCACCAGACATCCCCTGCAAAGGTGGCTGTGACCAAGGCCTTGTTCCCATCCCACTACTGGCCAACCTGACAGTGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTTGCAAGGGCAAGCCCCCTaGGGAACTGGGCCCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FQGLWHCFLRKACLPGALQGQAP*GTGPQN Trigger: GTTCTGGGGCCCAGTTCCCAAGGGGGCTTGCCCTTG...CAAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS GCA 90 bp | TGGCCAGTAGTGGGATGGGAACAAGGCCTTGGTCACAGCCACCTTTaGAGGGGATGTCTGGTGGGAAGCACGTTAGGTTCTGACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WPVVGWEQGLGHSHL*RGCLVGSTLGSDRD Trigger: GTCCCTGTCAGAACCTAACGTGCTTCCCACCAGACATCCCCTGCAAAGGTGGCTGTGACCAAGGCCTTGTTCCCATCCCACTACTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGATTTCTTTAAAGAACCAAGCTGACCAGTTCCAGGGCCTCTGGCATTGCCCATCCAAGGTGACGTaGGGCAGCGGAGCCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLISLKNQADQFQGLWHCPSKVT*GSGAPV Trigger: GACCGGGGCTCCGCTGCCCAACGTCACCTTGGATGG...GCAATGCCAGAGGCCCTGGAACTGGTCAGCTTGGTTCTTTAAAGAAATCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS TCA 90 bp | AGCTCCATCCAGCTCCATCAAGGAGTCCCCAAATGGCCCACGGCCTaGGCGCTTGGTGAAGCTTTGTCCACTGAACTGAGGGTAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSIQLHQGVPKWPTA*ALGEALSTELRVVS Trigger: ACTCACTACCCTCAGTTCAGTGGACAAAGCTTCACCAAGCGCTCAGGCCGTGGGCCATTTGGGGACTCCTTGATGGAGCTGGATGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 90 bp | CAGAGAGCTGGCCAGCTCATGGGTTACACCAGGAGTAATGTGACCTaGCCAGTAGACCAAGGCAGGCTCTCGGACGCCACCTTCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRAGQLMGYTRSNVT*PVDQGRLSDATFKS Trigger: ACTTTTGAAGGTGGCGTCCGAGAGCCTGCCTTGGTCTACTGGCCAGGTCACATTACTCCTGGTGTAACCCATGAGCTGGCCAGCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | CTTGAGGAAAGCCTGTCTTCCAGGTGCTTTGCATCTTTAGGGTTCCTCTGCCCTGACTTCCGTGGGCTCTaGCCTGTGCCTAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEESLSSRCFASLGFLCPDFRGL*PVPSSK Trigger: CTTGCTGCTAGGCACAGGCAAGAGCCCACGGAAGTC...AGGGCAGAGGAACCCTAAAGATGCAAAGCACCTGGAAGACAGGCTTTCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | CCCCACCCCCAGTTCCTGGCACTTGAACTCATTACCGGTTTCTGTGAAGGGACAACTCCAAGATGCCACTaGCCAGCCATCCCTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPQFLALELITGFCEGTTPRCH*PAIPVR Trigger: CCTTACAGGGATGGCTGGCAAGTGGCATCTTGGAGT...TGTCCCTTCACAGAAACCGGTAATGAGTTCAAGTGCCAGGAACTGGGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 90 bp | CTTGTATTTCCCATTCCGAACAGCAAAGACCCCATGGATCTCGTCTaGGTAGGGCGGGTAGAAGAAGACAGACTTCCGTGGGCTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVFPIPNSKDPMDLV*VGRVEEDRLPWALA Trigger: GGCAAGAGCCCACGGAAGTCTGTCTTCTTCTACCCGCCCTACCCAGACGAGATCCATGGGGTCTTTGCTGTTCGGAATGGGAAATACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165199.8 ENSMUST00000168270.2 |
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| CDS-3UTR CAA 90 bp | TGGGTTCAAATCCTAGCTCAAGCTCTTTCTGGTAAGGTGGCATCGGACTTGGAAGCCTCCACTGTCAGGTaGGCCAGTAGTGGGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WVQILAQALSGKVASDLEASTVR*ASSGMG Trigger: TCCCATCCCACTACTGGCCAACCTGACAGTGGAGGC...TTCCAAGTCCGATGCCACCTTACCAGAAAGAGCTTGAGCTAGGATTTGAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | GTTCCAGGGCCTCTGGCATTGCTTCTTGAGGAAAGCCTGTCTTCCAGGTGCTTTGCATCGTACTGGGCCTaGAGGAGTTGGATGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPGPLALLLEESLSSRCFASYWA*RSWMCF Trigger: GAAACACATCCAACTCCTCAAGGCCCAGTACGATGC...AAAGCACCTGGAAGACAGGCTTTCCTCAAGAAGCAATGCCAGAGGCCCTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS-3UTR CAA 90 bp | GTCTCAAGTCTCAGCTGGTGTTATTACATTACCAGATACAAACTACACACTTGTCGCCACCTTCAAAAGTaGTTCCTTTTCCACATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSLSWCYYITRYKLHTCRHLQK*FLFHIS Trigger: TGAGATGTGGAAAAGGAACAACTTTTGAAGGTGGCG...ACAAGTGTGTAGTTTGTATCTGGTAATGTAATAACACCAGCTGAGACTTGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CAA 90 bp | GTGCCTAGCAGCAAGGGGCTGATGTCAACACCATCCAAGGTGACGTaGGGCAGCGGAGCCCCGGTCAGGGCTGCCAGGGTGGGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VPSSKGLMSTPSKVT*GSGAPVRAARVGSR Trigger: CCTGCTGCCCACCCTGGCAGCCCTGACCGGGGCTCCGCTGCCCAACGTCACCTTGGATGGTGTTGACATCAGCCCCTTGCTGCTAGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165199.8 ENSMUST00000168270.2 |
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| CDS GCA 72 bp | CCCCTTGGGAACTGGGCCCCAGAACTCCAGGGTACATaGCTGATCGAACTGGGAGCCGGCCAGTCAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLGNWAPELQGT*LIELGAGQSGG Trigger: CCCTCCTGACTGGCCGGCTCCCAGTTCGATCAGGCATGTACCCTGGAGTTCTGGGGCCCAGTTCCCAAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CAA 72 bp | AGCAAGGGGCTGATGTCAACACCATCCAAGGTGACGTaGGGCAGCGGAGCCCCGGTCAGGGCTGCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKGLMSTPSKVT*GSGAPVRAARV Trigger: CACCCTGGCAGCCCTGACCGGGGCTCCGCTGCCCAACGTCACCTTGGATGGTGTTGACATCAGCCCCTTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165199.8 ENSMUST00000168270.2 |
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| CDS CAA 90 bp | GCCTCCAGTCCAGGCAGCCAAGGGGGCTGGGCCTCCACTGTCAGGTaGGCCAGTAGTGGGATGGGAACAAGGCCTTGGTCACAGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSPGSQGGWASTVR*ASSGMGTRPWSQPP Trigger: AGGTGGCTGTGACCAAGGCCTTGTTCCCATCCCACTACTGGCCAACCTGACAGTGGAGGCCCAGCCCCCTTGGCTGCCTGGACTGGAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS TCA 72 bp | AGCCGTCAGACGGTTGGCAGCATGACAGGCAGGATCTaGAGTGGTGTCACTGTGGGCGGAGCCCTGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRQTVGSMTGRI*SGVTVGGALGE Trigger: TTCACCCAGGGCTCCGCCCACAGTGACACCACTTCAGATCCTGCCTGTCATGCTGCCAACCGTCTGACGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS GCA 72 bp | CAGCAGGATGTTAGGTGGGCTGGCAGTGCTCAGGCCTaGAGCCAATGCCAAAAAGAGGGTCCCCAGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QQDVRWAGSAQA*SQCQKEGPQGH Trigger: ATGGCCCTGGGGACCCTCTTTTTGGCATTGGCTGCAGGCCTGAGCACTGCCAGCCCACCTAACATCCTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 72 bp | GCTGGGCCTCCACTGTCAGGTTGGCCAGTAGTGGGATaGGAACAAGGCCTTGGTCACAGCCACCTTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGPPLSGWPVVG*EQGLGHSHLCR Trigger: CCTGCAAAGGTGGCTGTGACCAAGGCCTTGTTCCCATCCCACTACTGGCCAACCTGACAGTGGAGGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
||
| CDS CCA 72 bp | GGCCAGCTCATGGGTTACACCAGGAGTAATGTGACCTaGCCAGTAGACCAAGGCAGGCTCTCGGACGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GQLMGYTRSNVT*PVDQGRLSDAT Trigger: GGTGGCGTCCGAGAGCCTGCCTTGGTCTACTGGCCAGGTCACATTACTCCTGGTGTAACCCATGAGCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS TCA 72 bp | CAGCTCCATCAAGGAGTCCCCAAATGGCCCACGGCCTaGGCGCTTGGTGAAGCTTTGTCCACTGAACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLHQGVPKWPTA*ALGEALSTELR Trigger: CCTCAGTTCAGTGGACAAAGCTTCACCAAGCGCTCAGGCCGTGGGCCATTTGGGGACTCCTTGATGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CAA 72 bp | CTAGTGTCTCTTCCAGCAGACCGAGGTCCCCCACAGTaGTCATCAAGGCCCCTACAGCTCCATCCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSLPADRGPPQ*SSRPLQLHPAP Trigger: TGGAGCTGGATGGAGCTGTAGGGGCCTTGATGACAACTGTGGGGGACCTCGGTCTGCTGGAAGAGACACTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
||
| CDS TCA 72 bp | TTGCAGGGGATGTCTGGTGGGAAGCACGTTAGGTTCTaGCAGGGACCCTGGTCATGGGAATATGGGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQGMSGGKHVRF*QGPWSWEYGMP Trigger: GGGCATCCCATATTCCCATGACCAGGGTCCCTGTCAGAACCTAACGTGCTTCCCACCAGACATCCCCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CCA 72 bp | CCCATTCCGAACAGCAAAGACCCCATGGATCTCGTCTaGGTAGGGCGGGTAGAAGAAGACAGACTTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: PIPNSKDPMDLV*VGRVEEDRLPW Trigger: CCACGGAAGTCTGTCTTCTTCTACCCGCCCTACCCAGACGAGATCCATGGGGTCTTTGCTGTTCGGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165199.8 ENSMUST00000168270.2 |
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| CDS CCA 72 bp | CTTTTCCACATCTCAAGAGGCCAGAGCAGCCGCCATTaGACATGCGCATCAACTCAGGACCGTTATCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LFHISRGQSSRH*TCASTQDRYLQ Trigger: CTGCAGATAACGGTCCTGAGTTGATGCGCATGTCCAATGGCGGCTGCTCTGGCCTCTTGAGATGTGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CAA 72 bp | CCTTTTCCACATCTCAAGAGGCCAGAGCAGCCGCCATaGGACATGCGCATCAACTCAGGACCGTTATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PFPHLKRPEQPP*DMRINSGPLSA Trigger: TGCAGATAACGGTCCTGAGTTGATGCGCATGTCCAATGGCGGCTGCTCTGGCCTCTTGAGATGTGGAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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| CDS CAA 90 bp | AAAGTTGTTCCTTTTCCACATCTCAAGAGGCCAGAGCAGCCGCCATaGGACATGCGCATCAACTCAGGACCGTTATCTGCAGTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: KVVPFPHLKRPEQPP*DMRINSGPLSAVKM Trigger: CATCTTCACTGCAGATAACGGTCCTGAGTTGATGCGCATGTCCAATGGCGGCTGCTCTGGCCTCTTGAGATGTGGAAAAGGAACAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165199.8 |
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