RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARRDC5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073380

Ensembl transcript IDs: ENSMUST00000097303.3, ENSMUST00000233911.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGCTCGCTGCTGTCTGCCCGCCGGCGCCTCTCGGCACTTGGCGTaGAGCCCTCGTACTGCACATGGGCATAGAGGGCGAACACCACGG +
Preference number: 1 (lower is better)
Translates to: AARCCLPAGASRHLA*SPRTAHGHRGRTPR
Trigger: CCGTGGTGTTCGCCCTCTATGCCCATGTGCAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGCAGCGAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR GCA 90 bp TGGAATCCGTGCGTTGGCCATCTGTCGCAGCAGCTCGCTGCTGTCTaGCCGCCGGCGCCTCTCGGCACTTGGCGTGAAGCCCTCGTACTG +
Preference number: 1 (lower is better)
Translates to: WNPCVGHLSQQLAAV*PPAPLGTWREALVL
Trigger: CAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCACGGATTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR CCA 90 bp TCGCAGCAGCTCGCTGCTGTCTGCCCGCCGGCGCCTCTCGGCACTTaGCGTGAAGCCCTCGTACTGCACATGGGCATAGAGGGCGAACAC +
Preference number: 1 (lower is better)
Translates to: SQQLAAVCPPAPLGT*REALVLHMGIEGEH
Trigger: GTGTTCGCCCTCTATGCCCATGTGCAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGCAGCGAGCTGCTGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR GCA 90 bp AGGTGTTCTTGCTCATCTGCACATGCAGGCTCACCCAGCCCTGACTaGAGCAGTTGTATGACACCTTCTTCTCAGCTTCTACAGACACGG +
Preference number: 1 (lower is better)
Translates to: RCSCSSAHAGSPSPD*SSCMTPSSQLLQTR
Trigger: CCGTGTCTGTAGAAGCTGAGAAGAAGGTGTCATACAACTGCTGCAGTCAGGGCTGGGTGAGCCTGCATGTGCAGATGAGCAAGAACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR-3UTR GCA 90 bp GCTGTCTGCCCGCCGGCGCCTCTCGGCACTTGGCGTGAAGCCCTCGTACTGCACGTGTTCTTGCTCATCTaGACATGCAGGCTCACCCAG +
Preference number: 2 (lower is better)
Translates to: AVCPPAPLGTWREALVLHVFLLI*TCRLTQ
Trigger: CTGGGTGAGCCTGCATGTGCAGATGAGCAAGAACAC...GTGCAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR-3UTR CCA 90 bp AAGGCTGGAATCCGTGCGTTGGCCATCTGTCGCAGCAGCTCGCTGCTGTCTGCCGCGCCTCTCGGCACTTaGCGTGAAGCCCTCGTACTG +
Preference number: 2 (lower is better)
Translates to: KAGIRALAICRSSSLLSAAPLGT*REALVL
Trigger: CAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGC...GGCAGACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCACGGATTCCAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR GCA 72 bp TGCGTTGGCCATCTGTCGCAGCAGCTCGCTGCTGTCTaGCCGCCGGCGCCTCTCGGCACTTGGCGTGAAGCC +
Preference number: 3 (lower is better)
Translates to: CVGHLSQQLAAV*PPAPLGTWREA
Trigger: GGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR TCA 72 bp TGCTGTCTGCCCGCCGGCGCCTCTCGGCACTTGGCGTaGAGCCCTCGTACTGCACATGGGCATAGAGGGCGA +
Preference number: 3 (lower is better)
Translates to: CCLPAGASRHLA*SPRTAHGHRGR
Trigger: TCGCCCTCTATGCCCATGTGCAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR CCA 72 bp CTCGCTGCTGTCTGCCCGCCGGCGCCTCTCGGCACTTaGCGTGAAGCCCTCGTACTGCACATGGGCATAGAG +
Preference number: 3 (lower is better)
Translates to: LAAVCPPAPLGT*REALVLHMGIE
Trigger: CTCTATGCCCATGTGCAGTACGAGGGCTTCACGCCAAGTGCCGAGAGGCGCCGGCGGGCAGACAGCAGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR TCA 72 bp ATGCAGGCTCACCCAGCCCTGACTGCAGCAGTTGTATaGCACCTTCTTCTCAGCTTCTACAGACACGGAGTT +
Preference number: 3 (lower is better)
Translates to: MQAHPALTAAVV*HLLLSFYRHGV
Trigger: AACTCCGTGTCTGTAGAAGCTGAGAAGAAGGTGTCATACAACTGCTGCAGTCAGGGCTGGGTGAGCCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
3UTR GCA 72 bp TGCTCATCTGCACATGCAGGCTCACCCAGCCCTGACTaGAGCAGTTGTATGACACCTTCTTCTCAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: CSSAHAGSPSPD*SSCMTPSSQLL
Trigger: TAGAAGCTGAGAAGAAGGTGTCATACAACTGCTGCAGTCAGGGCTGGGTGAGCCTGCATGTGCAGATGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
CDS CCA 90 bp ATATGGTCCTCATATGGCAGCTCATCCAGCCGGGGGCAGTCGGCCTaGCCTTCCCTGGTGCTGGTGATGATGATGGGGAGTCGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: IWSSYGSSSSRGQSA*PSLVLVMMMGSRAL
Trigger: CAAAGCCCGACTCCCCATCATCATCACCAGCACCAGGGAAGGCCAGGCCGACTGCCCCCGGCTGGATGAGCTGCCATATGAGGACCATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS GCA 90 bp GTTGAAGGCACTAACCACTGTGGTACTGTTGAAGGCTGGAATCCGTaGGTTGGCCATCTGTCGCAGCAGCTCGCTGCTGTCTGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: VEGTNHCGTVEGWNP*VGHLSQQLAAVCPP
Trigger: CGGCGGGCAGACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCACGGATTCCAGCCTTCAACAGTACCACAGTGGTTAGTGCCTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CCA 90 bp CAGCGGCAGGTTGAAGGCACTAACCACTGTGGTACTGTTGAAGGCTaGAATCCGTGCGTTGGCCATCTGTCGCAGCAGCTCGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: QRQVEGTNHCGTVEG*NPCVGHLSQQLAAV
Trigger: GACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCACGGATTCCAGCCTTCAACAGTACCACAGTGGTTAGTGCCTTCAACCTGCCGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS-3UTR CAA 90 bp CGGCACATAGGTGTTCTTGCTCATCTGCACATGCAGGCTCACCCAGCCCTGACTTCCACGAGGGTACTGTaGAGGGTGAGGACCACCTGC +
Preference number: 5 (lower is better)
Translates to: RHIGVLAHLHMQAHPALTSTRVL*RVRTTC
Trigger: GCAGGTGGTCCTCACCCTCAACAGTACCCTCGTGGA...AGTCAGGGCTGGGTGAGCCTGCATGTGCAGATGAGCAAGAACACCTATGTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
CDS-3UTR CAA 90 bp CGGCACATAGGTGTTCTTGCTCATCTGCACATGCAGGCTCACCCAGCCCTGACTAGGTACAGCTTCTTCTaGGCCAGGATATGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: RHIGVLAHLHMQAHPALTRYSFF*ARICSR
Trigger: CCGGGAGCATATCCTGGCCAAGAAGAAGCTGTACCT...AGTCAGGGCTGGGTGAGCCTGCATGTGCAGATGAGCAAGAACACCTATGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233911.2
CDS CCA 90 bp TTCTTCTCAGCTTCTACAGACACGGAGTTCTCACTTAGATTCCTCTaGCGGAACTCAGAAATCCCTTGGACCAGCAGGTACAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FFSASTDTEFSLRFL*RNSEIPWTSRYSFF
Trigger: GAAGAAGCTGTACCTGCTGGTCCAAGGGATTTCTGAGTTCCGCCAGAGGAATCTAAGTGAGAACTCCGTGTCTGTAGAAGCTGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CCA 90 bp ATCTTACTGTTGAAGGTGGACGGGAGCCTGGGAGGTAAGTTGAAATaGAAGTCAAAGGTGTGGCTGCCTGCCCTTAACCAATTATCTTTT +
Preference number: 5 (lower is better)
Translates to: ILLLKVDGSLGGKLK*KSKVWLPALNQLSF
Trigger: AAAAGATAATTGGTTAAGGGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCTCCCGTCCACCTTCAACAGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CCA 90 bp GTGGACGGGAGCCTGGGAGGTAAGTTGAAATGGAAGTCAAAGGTGTaGCTGCCTGCCCTTAACCAATTATCTTTTATTGGGAATGTTTTT +
Preference number: 5 (lower is better)
Translates to: VDGSLGGKLKWKSKV*LPALNQLSFIGNVF
Trigger: AAAAACATTCCCAATAAAAGATAATTGGTTAAGGGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCTCCCGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 90 bp CTACCGACAAGCTCCACCTTCACGACGGGGTCCACGAGGGTACTGTaGAGGGTGAGGACCACCTGCCCGTCTATGATAGAGCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LPTSSTFTTGSTRVL*RVRTTCPSMIEPAR
Trigger: CCTGGCCGGCTCTATCATAGACGGGCAGGTGGTCCTCACCCTCAACAGTACCCTCGTGGACCCCGTCGTGAAGGTGGAGCTTGTCGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097303.3
ENSMUST00000233911.2
CDS CCA 72 bp TCATATGGCAGCTCATCCAGCCGGGGGCAGTCGGCCTaGCCTTCCCTGGTGCTGGTGATGATGATGGGGAGT +
Preference number: 6 (lower is better)
Translates to: SYGSSSSRGQSA*PSLVLVMMMGS
Trigger: ACTCCCCATCATCATCACCAGCACCAGGGAAGGCCAGGCCGACTGCCCCCGGCTGGATGAGCTGCCATATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 72 bp AGCTCCACCTTCACGACGGGGTCCACGAGGGTACTGTaGAGGGTGAGGACCACCTGCCCGTCTATGATAGAG +
Preference number: 6 (lower is better)
Translates to: SSTFTTGSTRVL*RVRTTCPSMIE
Trigger: CTCTATCATAGACGGGCAGGTGGTCCTCACCCTCAACAGTACCCTCGTGGACCCCGTCGTGAAGGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097303.3
ENSMUST00000233911.2
CDS CAA 72 bp ACCACTGTGGTACTGTTGAAGGCTGGAATCCGTGCGTaGGCCATCTGTCGCAGCAGCTCGCTGCTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: TTVVLLKAGIRA*AICRSSSLLSA
Trigger: GGCAGACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCACGGATTCCAGCCTTCAACAGTACCACAGTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 72 bp CCCGTCTATGATAGAGCCGGCCAGGTAGACCGCATCTaGGGGCAGCACTACCTCGATGGACTTCACCACAGA +
Preference number: 6 (lower is better)
Translates to: PVYDRAGQVDRI*GQHYLDGLHHR
Trigger: TCTGTGGTGAAGTCCATCGAGGTAGTGCTGCCCCAAGATGCGGTCTACCTGGCCGGCTCTATCATAGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097303.3
ENSMUST00000233911.2
CDS GCA 72 bp ACTAACCACTGTGGTACTGTTGAAGGCTGGAATCCGTaGGTTGGCCATCTGTCGCAGCAGCTCGCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: TNHCGTVEGWNP*VGHLSQQLAAV
Trigger: GACAGCAGCGAGCTGCTGCGACAGATGGCCAACGCACGGATTCCAGCCTTCAACAGTACCACAGTGGTTAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 72 bp AGCGGCAGGTTGAAGGCACTAACCACTGTGGTACTGTaGAAGGCTGGAATCCGTGCGTTGGCCATCTGTCGC +
Preference number: 6 (lower is better)
Translates to: SGRLKALTTVVL*KAGIRALAICR
Trigger: GCGACAGATGGCCAACGCACGGATTCCAGCCTTCAACAGTACCACAGTGGTTAGTGCCTTCAACCTGCCGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 72 bp TGGGAGCCACTGCTCACAGACAAAACCAGCGGCAGGTaGAAGGCACTAACCACTGTGGTACTGTTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: WEPLLTDKTSGR*KALTTVVLLKA
Trigger: AGCCTTCAACAGTACCACAGTGGTTAGTGCCTTCAACCTGCCGCTGGTTTTGTCTGTGAGCAGTGGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CCA 72 bp TTGAAGGTGGACGGGAGCCTGGGAGGTAAGTTGAAATaGAAGTCAAAGGTGTGGCTGCCTGCCCTTAACCAA +
Preference number: 6 (lower is better)
Translates to: LKVDGSLGGKLK*KSKVWLPALNQ
Trigger: TTGGTTAAGGGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCTCCCGTCCACCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 72 bp TTACTGTTGAAGGTGGACGGGAGCCTGGGAGGTAAGTaGAAATGGAAGTCAAAGGTGTGGCTGCCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: LLLKVDGSLGGK*KWKSKVWLPAL
Trigger: AAGGGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCTCCCGTCCACCTTCAACAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 90 bp TCATTTTCCTGGGAGCCACTGCTCACAGACAAAACCAGCGGCAGGTaGAAGGCACTAACCACTGTGGTACTGTTGAAGGCTGGAATCCGT +
Preference number: 6 (lower is better)
Translates to: SFSWEPLLTDKTSGR*KALTTVVLLKAGIR
Trigger: ACGGATTCCAGCCTTCAACAGTACCACAGTGGTTAGTGCCTTCAACCTGCCGCTGGTTTTGTCTGTGAGCAGTGGCTCCCAGGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CAA 90 bp TGGCCGATCTTACTGTTGAAGGTGGACGGGAGCCTGGGAGGTAAGTaGAAATGGAAGTCAAAGGTGTGGCTGCCTGCCCTTAACCAATTA +
Preference number: 6 (lower is better)
Translates to: WPILLLKVDGSLGGK*KWKSKVWLPALNQL
Trigger: TAATTGGTTAAGGGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCTCCCGTCCACCTTCAACAGTAAGATCGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3
CDS CCA 72 bp AGCCTGGGAGGTAAGTTGAAATGGAAGTCAAAGGTGTaGCTGCCTGCCCTTAACCAATTATCTTTTATTGGG +
Preference number: 6 (lower is better)
Translates to: SLGGKLKWKSKV*LPALNQLSFIG
Trigger: CCCAATAAAAGATAATTGGTTAAGGGCAGGCAGCCACACCTTTGACTTCCATTTCAACTTACCTCCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097303.3