Pregenerated sensors for ARRDC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042659Ensembl transcript IDs: ENSMUST00000048068.15, ENSMUST00000118110.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTACTGGAACACAAATGCACTACACGGAAACTGTCACCCACCCACTaGGGCCTCTTCACAGGAACCAAGTTTAGGCACGCTCCTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VLEHKCTTRKLSPTH*GLFTGTKFRHAPVL Trigger: GAGGACAGGAGCGTGCCTAAACTTGGTTCCTGTGAAGAGGCCCCAGTGGGTGGGTGACAGTTTCCGTGTAGTGCATTTGTGTTCCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR TCA 90 bp | CTCACGAAAGCCTGGAGCCACTGTCAGTTCCATCAGGATGTCACATaGCCACTGACTCCAGCAAGGACCTGGATCCTTGCTATGGTAACA | + |
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Preference number: 1 (lower is better) Translates to: LTKAWSHCQFHQDVT*PLTPARTWILAMVT Trigger: TGTTACCATAGCAAGGATCCAGGTCCTTGCTGGAGTCAGTGGTCATGTGACATCCTGATGGAACTGACAGTGGCTCCAGGCTTTCGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 90 bp | AATTTGGCTTGTCCAGCTCTTAACTGTGAGAGGCTCCCTCCCACCTaGTGTCAGAAAATTTTCTCAGTTCATGGGAGCAACAGACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: NLACPALNCERLPPT*CQKIFSVHGSNRLE Trigger: CTCCAGTCTGTTGCTCCCATGAACTGAGAAAATTTTCTGACACCAGGTGGGAGGGAGCCTCTCACAGTTAAGAGCTGGACAAGCCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR GCA 90 bp | TCAGGATGTCACATGACCACTGACTCCAGCAAGGACCTGGATCCTTaGTATGGTAACATGATAAGAAATCATGAAGACCCCAAGGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SGCHMTTDSSKDLDP*YGNMIRNHEDPKVW Trigger: CCAGACCTTGGGGTCTTCATGATTTCTTATCATGTTACCATAGCAAGGATCCAGGTCCTTGCTGGAGTCAGTGGTCATGTGACATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 90 bp | AAAGGTAAGTCCATCTCCACGATGGGTGTGGCACAACACTCTGCCTaGGAAGCACCAGGGTTTCTAAATCAAACCCTTAGAATTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: KGKSISTMGVAQHSA*EAPGFLNQTLRIWL Trigger: AAGCCAAATTCTAAGGGTTTGATTTAGAAACCCTGGTGCTTCCCAGGCAGAGTGTTGTGCCACACCCATCGTGGAGATGGACTTACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR TCA 90 bp | CCATCTCCACGATGGGTGTGGCACAACACTCTGCCTGGGAAGCACCAGGGTTTCTTCCTCTTTTCCTTTTaGTATGGCAAGCTGTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: PSPRWVWHNTLPGKHQGFFLFSF*YGKLLR Trigger: CCTTAACAGCTTGCCATATCAAAAGGAAAAGAGGAA...GAAACCCTGGTGCTTCCCAGGCAGAGTGTTGTGCCACACCCATCGTGGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGAAAATTTTCTCAGTTCATGGGACAACAGACTGGAGGCTaGGCATGTGACTGTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: TVRGSLPPGVRKFSQFMGQQTGG*ACDCEQ Trigger: CTGTTCACAGTCACATGCTCAGCCTCCAGTCTGTTG...TCCCATGAACTGAGAAAATTTTCTGACACCAGGTGGGAGGGAGCCTCTCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCCATTTTCTCTCTGTCCACTCCGTACTGTTGCTTTCTTTCCCTCCATTTATGTCACATGACCACTaGCTCCAGCAAGGACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ALHFLSVHSVLLLSFPPFMSHDH*LQQGPG Trigger: TCCAGGTCCTTGCTGGAGTCAGTGGTCATGTGACAT...AAATGGAGGGAAAGAAAGCAACAGTACGGAGTGGACAGAGAGAAAATGGAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCGAGGAGTCTGCTAACTaGATAGAGCAGAAACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KVKLCSRGREGSVCTKRCEESAN*IEQKPQ Trigger: CTGGGGTTTCTGCTCTATGCAGTTAGCAGACTCCTC...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR CCA 90 bp | AATTTGGCTTGTCCAGCTCTTAACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGAATTTTCTCAGTTCATaGGAGCAACAGACTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: NLACPALNCERLPPTWCQNFLSS*EQQTGG Trigger: GCCTCCAGTCTGTTGCTCCCATGAACTGAGAAAATT...CTGACACCAGGTGGGAGGGAGCCTCTCACAGTTAAGAGCTGGACAAGCCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR TCA 90 bp | AATTTGGCTTGTCCAGCTCTTAACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGCAACACACACTTTCATaGACAGTTCCTCTTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NLACPALNCERLPPTWCQQHTLS*TVPLFL Trigger: AAGGAAAAGAGGAACTGTTCATGAAAGTGTGTGTTG...CTGACACCAGGTGGGAGGGAGCCTCTCACAGTTAAGAGCTGGACAAGCCAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCTCTGGGGAGTTCAACTaGATTGAAAGTAGACCACTC | + |
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Preference number: 2 (lower is better) Translates to: KVKLCSRGREGSVCTKRCSGEFN*IESRPL Trigger: GAGTGGTCTACTTTCAATGCAGTTGAACTCCCCAGA...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR TCA 90 bp | CACATTTACTGGACATTGGTACAAAAATCCCTGAACGAATGCTCCACTGACTTTCATCAGGATGTCACATaGCCACTGACTCCAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: HIYWTLVQKSLNECSTDFHQDVT*PLTPAR Trigger: CCTTGCTGGAGTCAGTGGTCATGTGACATCCTGATG...AAAGTCAGTGGAGCATTCGTTCAGGGATTTTTGTACCAATGTCCAGTAAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGAAAATTTTCTCAGTTCATGGGAAAGGACCTGGATCCTTaGTATGGTAACATGATAAGA | + |
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Preference number: 2 (lower is better) Translates to: TVRGSLPPGVRKFSQFMGKDLDP*YGNMIR Trigger: TCTTATCATGTTACCATAGCAAGGATCCAGGTCCTT...TCCCATGAACTGAGAAAATTTTCTGACACCAGGTGGGAGGGAGCCTCTCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR CCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCCTTTTCCTTTTGATATaGCAAGCTGTTAAGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: KVKLCSRGREGSVCTKRCLFLLI*QAVKES Trigger: GGATTCCTTAACAGCTTGCCATATCAAAAGGAAAAG...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CAA 90 bp | GGTTCCGTGGTGATTCTCACACACCACAGTTACTGGCAATACCATTaGGCATTTTTGAAAATGGCATACAGTGACATACATGTGACTGAC | + |
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Preference number: 2 (lower is better) Translates to: GSVVILTHHSYWQYH*AFLKMAYSDIHVTD Trigger: GTCAGTCACATGTATGTCACTGTATGCCATTTTCAAAAATGCCAAATGGTATTGCCAGTAACTGTGGTGTGTGAGAATCACCACGGAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CAA 90 bp | TTGAAAGTAGACCACTCGCTCATTCTCACTCATTTCAAAGCTGTCTaGTTCCCCAAATCATGTCTTCCTACCAAGTCCATAAGTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: LKVDHSLILTHFKAV*FPKSCLPTKSISSQ Trigger: TTGTGAACTTATGGACTTGGTAGGAAGACATGATTTGGGGAACAAGACAGCTTTGAAATGAGTGAGAATGAGCGAGTGGTCTACTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR TCA 90 bp | GATCTTCAGTCACAGGGTTTCAGATGTAGTTTTCTACATTCCTGTTATCCTGGGACCATTTGGCATTTTTaGAAATGGCATACAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: DLQSQGFRCSFLHSCYPGTIWHF*KWHTVT Trigger: TGTCACTGTATGCCATTTTCAAAAATGCCAAATGGT...CCCAGGATAACAGGAATGTAGAAAACTACATCTGAAACCCTGTGACTGAAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CAA 90 bp | CCCACTAAACGTTCTCATCTTCTTTCATTTCTCTCATCTTCGGACTaGAAGTTCACCGATGTTCTGAAGTTAACTTTCTCTTTCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: PTKRSHLLSFLSSSD*KFTDVLKLTFSFIQ Trigger: TTGGATGAAAGAGAAAGTTAACTTCAGAACATCGGTGAACTTCAAGTCCGAAGATGAGAGAAATGAAAGAAGATGAGAACGTTTAGTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR TCA 72 bp | GCCTGGAGCCACTGTCAGTTCCATCAGGATGTCACATaGCCACTGACTCCAGCAAGGACCTGGATCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: AWSHCQFHQDVT*PLTPARTWILA Trigger: AGCAAGGATCCAGGTCCTTGCTGGAGTCAGTGGTCATGTGACATCCTGATGGAACTGACAGTGGCTCCAGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR GCA 72 bp | TGTGGGGGACTTCATGATTTCTCTAACCAACCCGACTaGCAGGGCTTATCTACAGTGAGCCACGGCGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: CGGLHDFSNQPD*QGLSTVSHGAP Trigger: TGGAGCGCCGTGGCTCACTGTAGATAAGCCCTGGCAGTCGGGTTGGTTAGAGAAATCATGAAGTCCCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 72 bp | CTGCATAGAGCAGAAACCCCAGAGGTCAGCCAGGCCTaGACTTTTGAGAGCAGGTCTGACAAAGCCACTAGA | + |
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Preference number: 3 (lower is better) Translates to: LHRAETPEVSQA*TFESRSDKATR Trigger: TCTAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGGTTTCTGCTCTATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 72 bp | CACAAATGCACTACACGGAAACTGTCACCCACCCACTaGGGCCTCTTCACAGGAACCAAGTTTAGGCACGCT | + |
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Preference number: 3 (lower is better) Translates to: HKCTTRKLSPTH*GLFTGTKFRHA Trigger: AGCGTGCCTAAACTTGGTTCCTGTGAAGAGGCCCCAGTGGGTGGGTGACAGTTTCCGTGTAGTGCATTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 72 bp | TCCATCTCCACGATGGGTGTGGCACAACACTCTGCCTaGGAAGCACCAGGGTTTCTAAATCAAACCCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: SISTMGVAQHSA*EAPGFLNQTLR Trigger: TCTAAGGGTTTGATTTAGAAACCCTGGTGCTTCCCAGGCAGAGTGTTGTGCCACACCCATCGTGGAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 72 bp | TGTCCAGCTCTTAACTGTGAGAGGCTCCCTCCCACCTaGTGTCAGAAAATTTTCTCAGTTCATGGGAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: CPALNCERLPPT*CQKIFSVHGSN Trigger: GTTGCTCCCATGAACTGAGAAAATTTTCTGACACCAGGTGGGAGGGAGCCTCTCACAGTTAAGAGCTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR CAA 90 bp | TTGGCTTGTCCAGCTCTTAACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGAAAGTTCCTCTTTTCCTTTaGATATGGCAAGCTGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: LACPALNCERLPPTWCQKVPLFL*IWQAVK Trigger: CTTAACAGCTTGCCATATCAAAAGGAAAAGAGGAAC...TTTCTGACACCAGGTGGGAGGGAGCCTCTCACAGTTAAGAGCTGGACAAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGGACCTGGATCCTTGCTATGGTAACATGATAAGAAATCATGAAGACCCCGGGAGTTCAACTGCATaGAAAGTAGACCACTCGCTC | + |
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Preference number: 3 (lower is better) Translates to: SKDLDPCYGNMIRNHEDPGSSTA*KVDHSL Trigger: GAGCGAGTGGTCTACTTTCAATGCAGTTGAACTCCC...GGGGTCTTCATGATTTCTTATCATGTTACCATAGCAAGGATCCAGGTCCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR GCA 72 bp | GAAATCATGAAGACCCCAAGGTCTGGGGAGTTCAACTaGATTGAAAGTAGACCACTCGCTCATTCTCACTCA | + |
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Preference number: 3 (lower is better) Translates to: EIMKTPRSGEFN*IESRPLAHSHS Trigger: TGAGTGAGAATGAGCGAGTGGTCTACTTTCAATGCAGTTGAACTCCCCAGACCTTGGGGTCTTCATGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR GCA 72 bp | CACATGACCACTGACTCCAGCAAGGACCTGGATCCTTaGTATGGTAACATGATAAGAAATCATGAAGACCCC | + |
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Preference number: 3 (lower is better) Translates to: HMTTDSSKDLDP*YGNMIRNHEDP Trigger: GGGGTCTTCATGATTTCTTATCATGTTACCATAGCAAGGATCCAGGTCCTTGCTGGAGTCAGTGGTCATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 72 bp | GAAGCACCAGGGTTTCTAAATCAAACCCTTAGAATTTaGCTTGTCCAGCTCTTAACTGTGAGAGGCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: EAPGFLNQTLRI*LVQLLTVRGSL Trigger: GAGGGAGCCTCTCACAGTTAAGAGCTGGACAAGCCAAATTCTAAGGGTTTGATTTAGAAACCCTGGTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CCA 72 bp | GAGAGGTATGCTCAGCGGGGAGAAGTACACATTTACTaGACATTGGTACAAAAATCCCTGAACGAATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: ERYAQRGEVHIY*TLVQKSLNECS Trigger: GGAGCATTCGTTCAGGGATTTTTGTACCAATGTCCAGTAAATGTGTACTTCTCCCCGCTGAGCATACCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR GCA 72 bp | AGTATCAATGTAATTACTAATGTACTGGAACACAAATaGACTACACGGAAACTGTCACCCACCCACTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SINVITNVLEHK*TTRKLSPTHWG Trigger: GCCCCAGTGGGTGGGTGACAGTTTCCGTGTAGTGCATTTGTGTTCCAGTACATTAGTAATTACATTGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR CAA 90 bp | GATCTTCAGTCACAGGGTTTCAGATGTAGTTTTCTACATTCCTGTTATCCTGGGCATTTCAAAGCTGTCTaGTTCCCCAAATCATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: DLQSQGFRCSFLHSCYPGHFKAV*FPKSCL Trigger: AAGACATGATTTGGGGAACAAGACAGCTTTGAAATG...CCCAGGATAACAGGAATGTAGAAAACTACATCTGAAACCCTGTGACTGAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR-3UTR CAA 90 bp | CACATTTACTGGACATTGGTACAAAAATCCCTGAACGAATGCTCCACTGACTTTCGCTCCTGTCCTCTTTaGATTTGGGATTTCTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: HIYWTLVQKSLNECSTDFRSCPL*IWDFLR Trigger: TCTTAAGAAATCCCAAATCAAAAGAGGACAGGAGCG...AAAGTCAGTGGAGCATTCGTTCAGGGATTTTTGTACCAATGTCCAGTAAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR TCA 72 bp | AAGTGTAAGTACAGCCCTTCACAACACACACTTTCATaGACAGTTCCTCTTTTCCTTTTGATATGGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: KCKYSPSQHTLS*TVPLFLLIWQA Trigger: AGCTTGCCATATCAAAAGGAAAAGAGGAACTGTTCATGAAAGTGTGTGTTGTGAAGGGCTGTACTTACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR CCA 90 bp | CTCCACGATGGGTGTGGCACAACACTCTGCCTGGGAAGCACCAGGGTTTCTAAACACCGATGCAGACCCTaGCCCCAGCGCTCGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LHDGCGTTLCLGSTRVSKHRCRP*PQRSGP Trigger: GGGGCCCGAGCGCTGGGGCCAGGGTCTGCATCGGTG...TTTAGAAACCCTGGTGCTTCCCAGGCAGAGTGTTGTGCCACACCCATCGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR GCA 90 bp | CCCCAGAGGTCAGCCAGGCCTGGACTTTTGAGAGCAGGTCTGACAAAGCCACTAGGTGGTGCTTCAGGCTaGTCCGGTAGGGCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PQRSARPGLLRAGLTKPLGGASG*SGRASA Trigger: GGCACTGGCCCTACCGGAGCAGCCTGAAGCACCACC...TAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR GCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCGCCTCCAGCAGCACGTaGCCGGCCACTGTCTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: KVKLCSRGREGSVCTKRCASSST*PATVSP Trigger: CGGCGAGACAGTGGCCGGGCACGTGCTGCTGGAGGC...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR GCA 90 bp | TGCAAAACAGAGACACAGAAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTCAGGGCCACCGGCTCTaGCGCCTCCAGCAGCACGTG | + |
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Preference number: 4 (lower is better) Translates to: CKTETQKVKLCSRGREGSQGHRL*RLQQHV Trigger: CACGTGCTGCTGGAGGCGGCAGAGCCGGTGGCCCTG...AGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTTCTGTGTCTCTGTTTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR CCA 90 bp | CCATCTCCACGATGGGTGTGGCACAACACTCTGCCTGGGAAGCACCAGGGTTTCGGAATATGGCTGCCTTaGGAACAACCAGCCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: PSPRWVWHNTLPGKHQGFGIWLP*EQPAEM Trigger: CATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCC...GAAACCCTGGTGCTTCCCAGGCAGAGTGTTGTGCCACACCCATCGTGGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| 3UTR CAA 72 bp | GAGCAGAAACCCCAGAGGTCAGCCAGGCCTGGACTTTaGAGAGCAGGTCTGACAAAGCCACTAGAGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: EQKPQRSARPGL*RAGLTKPLEVG Trigger: TCCTACCTCTAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGGTTTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR TCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCCACTGTCTCGCCGCTTaGGTAGCAGCCCTTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KVKLCSRGREGSVCTKRCHCLAA*VAALAL Trigger: GAGAGCAAGGGCTGCTACTCAAGCGGCGAGACAGTG...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR CCA 90 bp | CCCCAGAGGTCAGCCAGGCCTGGACTTTTGAGAGCAGGTCTGACAAAGCCACTATCTGACGCTCTGATCTaGAACTTGGGGTCGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: PQRSARPGLLRAGLTKPLSDALI*NLGSFQ Trigger: TTGGAACGACCCCAAGTTCCAGATCAGAGCGTCAGA...TAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR TCA 90 bp | AGGAGGCTGGTAGAGACATGGCTGACTCTGCCAGCAACAACACAGTCCTTAGGTACACAGGACCAGAGGTaGAAAGCCAACAGCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: RRLVETWLTLPATTQSLGTQDQR*KANSQP Trigger: TGGTTGGCTGTTGGCTTTTCACCTCTGGTCCTGTGT...ACCTAAGGACTGTGTTGTTGCTGGCAGAGTCAGCCATGTCTCTACCAGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR CCA 90 bp | CCCCAGAGGTCAGCCAGGCCTGGACTTTTGAGAGCAGGTCTGACAAAGCCACTACTCCCAGAACCAATGTaGTTTCCTCGAACATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PQRSARPGLLRAGLTKPLLPEPM*FPRTLA Trigger: TGCCAATGTTCGAGGAAACCACATTGGTTCTGGGAG...TAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR GCA 90 bp | AATTTGGCTTGTCCAGCTCTTAACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGCATACTGAACTGGCTTaGGACACTGCTGTTTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: NLACPALNCERLPPTWCQHTELA*DTAVSA Trigger: CGCAGAAACAGCAGTGTCGCAAGCCAGTTCAGTATG...CTGACACCAGGTGGGAGGGAGCCTCTCACAGTTAAGAGCTGGACAAGCCAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS-3UTR CCA 90 bp | GAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATGCACCGATGCAGACCCTaGCCCCAGCGCTCGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EITFAIAWLAALFYVFLMHRCRP*PQRSGP Trigger: GGGGCCCGAGCGCTGGGGCCAGGGTCTGCATCGGTG...CATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
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| CDS-3UTR CCA 90 bp | ACTGTGAGAGGCTCCCTCCCACCTGGTGTCAGAAAATTTTCTCAGTTCATGGGAGGATGGGGTGACAGGTaGGATCTTCAGCATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVRGSLPPGVRKFSQFMGGWGDR*DLQHLP Trigger: GGGAAGATGCTGAAGATCCCACCTGTCACCCCATCC...TCCCATGAACTGAGAAAATTTTCTGACACCAGGTGGGAGGGAGCCTCTCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR GCA 90 bp | CCACAGGAGAGGTATGCTCAGCGGGGAGAAGTACACATTTACTGGACATTGGTACGACACTGCTGTTTCTaGGGCCAAAGCCACTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PQERYAQRGEVHIYWTLVRHCCF*GQSHCM Trigger: CATACAGTGGCTTTGGCCGCAGAAACAGCAGTGTCG...TACCAATGTCCAGTAAATGTGTACTTCTCCCCGCTGAGCATACCTCTCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCGCAATCCAGGATGGATaGGGTGACAGGTGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVKLCSRGREGSVCTKRCAIQDG*GDRWDL Trigger: AAGATCCCACCTGTCACCCCATCCATCCTGGATTGC...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR TCA 90 bp | TGCAAAACAGAGACACAGAAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGGTTCAGACGGAAGCTaGAAGCGAAAGGGAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: CKTETQKVKLCSRGREGSGSDGS*KRKGNS Trigger: CGAGTTTCCCTTTCGCTTTCAGCTTCCGTCTGAACC...AGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTTCTGTGTCTCTGTTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR TCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCGCCCTCACACAGTACTaGATACTGCCATACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVKLCSRGREGSVCTKRCALTQY*ILPYFP Trigger: TGGGAAGTATGGCAGTATTCAGTACTGTGTGAGGGC...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR TCA 90 bp | CCCCAGAGGTCAGCCAGGCCTGGACTTTTGAGAGCAGGTCTGACAAAGCCACTAAACAACCAGCCGAGATaGACAATTTTCTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQRSARPGLLRAGLTKPLNNQPR*TIFYFC Trigger: GCAGAAATAGAAAATTGTTCATCTCGGCTGGTTGTT...TAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR GCA 90 bp | TTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAGCCTCCAGCAGCACGTaGCCGGCCACTGTCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEITFAIAWLAALFYVFLASSST*PATVSP Trigger: CGGCGAGACAGTGGCCGGGCACGTGCTGCTGGAGGC...TAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTGTGTGCACCAAAAGATGCATCTGCATAATTTGGTaGTGCTTCAGGCTGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVKLCSRGREGSVCTKRCICIIW*CFRLLR Trigger: CCGGAGCAGCCTGAAGCACCACCAAATTATGCAGAT...GCATCTTTTGGTGCACACAGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR GCA 90 bp | GAACACTCTGTTCTGTGTCAGTATCAGGTATCCCAAAGATGTCCCGCCTACTCCCCCAGTAAACGATGTTaGCAAAGGTTCAGACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHSVLCQYQVSQRCPAYSPSKRC*QRFRRK Trigger: CTTCCGTCTGAACCTTTGGCAACATCGTTTACTGGG...GGAGTAGGCGGGACATCTTTGGGATACCTGATACTGACACAGAACAGAGTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR GCA 90 bp | TGCAAAACAGAGACACAGAAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTCCAACCATTTTCTCCTaGGTCTTCAGCATAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CKTETQKVKLCSRGREGSPTIFS*VFSIGV Trigger: GACTCCTATGCTGAAGACGCAGGAGAAAATGGTTGG...AGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTTCTGTGTCTCTGTTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CCA 90 bp | GCGCTCCATTTTCTCTCTGTCCACTCCGTACTGTTGCTTTCTTTCCCTCCATTTTCTGGGTTTGGAATATaGCTGCCTTGGGAACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALHFLSVHSVLLLSFPPFSGFGI*LPWEQP Trigger: TGGTTGTTCCCAAGGCAGCCATATTCCAAACCCAGA...AAATGGAGGGAAAGAAAGCAACAGTACGGAGTGGACAGAGAGAAAATGGAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CCA 90 bp | GCGCTCCATTTTCTCTCTGTCCACTCCGTACTGTTGCTTTCTTTCCCTCCATTTCACATCTGCATAATTTaGTGGTGCTTCAGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALHFLSVHSVLLLSFPPFHICII*WCFRLL Trigger: GAGCAGCCTGAAGCACCACCAAATTATGCAGATGTG...AAATGGAGGGAAAGAAAGCAACAGTACGGAGTGGACAGAGAGAAAATGGAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR TCA 90 bp | GAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATGCACTGTCTCGCCGCTTaGGTAGCAGCCCTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EITFAIAWLAALFYVFLMHCLAA*VAALAL Trigger: GAGAGCAAGGGCTGCTACTCAAGCGGCGAGACAGTG...CATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR GCA 90 bp | TGCAAAACAGAGACACAGAAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTTTGAGTAGCAGCCCTTaGTCTCATCTTCGAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: CKTETQKVKLCSRGREGSLSSSP*SHLRTL Trigger: TAGTGTTCGAAGATGAGAGCAAGGGCTGCTACTCAA...AGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTTCTGTGTCTCTGTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CCA 90 bp | GCGGGGAGAAGTACACATTTACTGGACATTGGTACAAAAATCCCTGAACGAATGAAGTACGTCTGGGTTTaGAATATGGCTGCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGRSTHLLDIGTKIPERMKYVWV*NMAALG Trigger: TCCCAAGGCAGCCATATTCCAAACCCAGACGTACTT...CATTCGTTCAGGGATTTTTGTACCAATGTCCAGTAAATGTGTACTTCTCCCCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| 3UTR CAA 72 bp | GCTTCAGGCCAGACAGACAGGTATAAAGTTATATCTTaGCACTCTTCAATGCCACTGTTAGCTGTGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASGQTDRYKVIS*HSSMPLLAVLP Trigger: CGGAAGCACAGCTAACAGTGGCATTGAAGAGTGCAAAGATATAACTTTATACCTGTCTGTCTGGCCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR GCA 90 bp | TGCAAAACAGAGACACAGAAAGTAAAGTTGTGCTCCAGGGGAAGGGAAGGGTCTAACGGAATTCTTGTATaGAGGCAAACATTGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKTETQKVKLCSRGREGSNGILV*RQTLSS Trigger: GCTACTCAATGTTTGCCTGCATACAAGAATTCCGTT...AGACCCTTCCCTTCCCCTGGAGCACAACTTTACTTTCTGTGTCTCTGTTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CCA 90 bp | GAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATGGGATGGGGTGACAGGTaGGATCTTCAGCATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EITFAIAWLAALFYVFLMGWGDR*DLQHLP Trigger: GGGAAGATGCTGAAGATCCCACCTGTCACCCCATCC...CATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| 3UTR CAA 72 bp | GACCACTCGCTCATTCTCACTCATTTCAAAGCTGTCTaGTTCCCCAAATCATGTCTTCCTACCAAGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: DHSLILTHFKAV*FPKSCLPTKSI Trigger: TATGGACTTGGTAGGAAGACATGATTTGGGGAACAAGACAGCTTTGAAATGAGTGAGAATGAGCGAGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR TCA 90 bp | GAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATGACACAGGACCAGAGGTaGAAAGCCAACAGCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EITFAIAWLAALFYVFLMTQDQR*KANSQP Trigger: TGGTTGGCTGTTGGCTTTTCACCTCTGGTCCTGTGT...CATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGACCTGGATCCTTGCTATGGTAACATGATAAGAAATCATGAAGACCCCTTCCGATACCACATCTaGATAATTTGGTGGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKDLDPCYGNMIRNHEDPFRYHI*IIWWCF Trigger: GAAGCACCACCAAATTATGCAGATGTGGTATCGGAA...GGGGTCTTCATGATTTCTTATCATGTTACCATAGCAAGGATCCAGGTCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTGGTTCAGACGGAAGCTaGAAGCGAAAGGGAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRDHICNRMACCSVLCIFGSDGS*KRKGNS Trigger: CGAGTTTCCCTTTCGCTTTCAGCTTCCGTCTGAACC...AAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR TCA 90 bp | GATCTTCAGTCACAGGGTTTCAGATGTAGTTTTCTACATTCCTGTTATCCTGGGTTAGCACCAGGGATATaGATGTATACAGCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLQSQGFRCSFLHSCYPGLAPGI*MYTAKE Trigger: CTCCTTAGCTGTATACATTCATATCCCTGGTGCTAA...CCCAGGATAACAGGAATGTAGAAAACTACATCTGAAACCCTGTGACTGAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CCA 90 bp | AGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATGCAATCCAGGATGGATaGGGTGACAGGTGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDHICNRMACCSVLCIFNAIQDG*GDRWDL Trigger: AAGATCCCACCTGTCACCCCATCCATCCTGGATTGC...ATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR GCA 90 bp | GAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATGCCCAGTAAACGATGTTaGCAAAGGTTCAGACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EITFAIAWLAALFYVFLMPSKRC*QRFRRK Trigger: CTTCCGTCTGAACCTTTGGCAACATCGTTTACTGGG...CATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTTCTGACGCTCTGATCTaGAACTTGGGGTCGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRDHICNRMACCSVLCIFSDALI*NLGSFQ Trigger: TTGGAACGACCCCAAGTTCCAGATCAGAGCGTCAGA...AAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR GCA 90 bp | TTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTACCAACCATTTTCTCCTaGGTCTTCAGCATAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEITFAIAWLAALFYVFLPTIFS*VFSIGV Trigger: GACTCCTATGCTGAAGACGCAGGAGAAAATGGTTGG...TAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTTCTGGGTTTGGAATATaGCTGCCTTGGGAACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: IRDHICNRMACCSVLCIFSGFGI*LPWEQP Trigger: TGGTTGTTCCCAAGGCAGCCATATTCCAAACCCAGA...AAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAAGTACGTCTGGGTTTaGAATATGGCTGCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRDHICNRMACCSVLCIFKYVWV*NMAALG Trigger: TCCCAAGGCAGCCATATTCCAAACCCAGACGTACTT...AAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR CCA 90 bp | AGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATCTCCCAGAACCAATGTaGTTTCCTCGAACATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDHICNRMACCSVLCIFNLPEPM*FPRTLA Trigger: TGCCAATGTTCGAGGAAACCACATTGGTTCTGGGAG...ATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR GCA 90 bp | TTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTATTGAGTAGCAGCCCTTaGTCTCATCTTCGAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: LEITFAIAWLAALFYVFLLSSSP*SHLRTL Trigger: TAGTGTTCGAAGATGAGAGCAAGGGCTGCTACTCAA...TAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAACAACCAGCCGAGATaGACAATTTTCTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRDHICNRMACCSVLCIFNNQPR*TIFYFC Trigger: GCAGAAATAGAAAATTGTTCATCTCGGCTGGTTGTT...AAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
||
| CDS CCA 90 bp | TGCTCCGGTAGGGCCAGTGCCAACCAGCACATGTCCATACTGAACTaGCTTGCGACACTGCTGTTTCTGCGGCCAAAGCCACTGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSGRASANQHMSILN*LATLLFLRPKPLYG Trigger: TCCATACAGTGGCTTTGGCCGCAGAAACAGCAGTGTCGCAAGCCAGTTCAGTATGGACATGTGCTGGTTGGCACTGGCCCTACCGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCTGGTAGAGACATGGCTGACTCTGCCAGCAACAACACAGTCCTTAGGTCCACTGTCTCGCCGCTaGAGTAGCAGCCCTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLVETWLTLPATTQSLGPLSRR*SSSPCS Trigger: AGAGCAAGGGCTGCTACTCAAGCGGCGAGACAGTGG...ACCTAAGGACTGTGTTGTTGCTGGCAGAGTCAGCCATGTCTCTACCAGCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CAA 90 bp | CCCCAGAGGTCAGCCAGGCCTGGACTTTTGAGAGCAGGTCTGACAAAGCCACTACAAGTACGTCTGGGTTaGGAATATGGCTGCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRSARPGLLRAGLTKPLQVRLG*EYGCLG Trigger: CCCAAGGCAGCCATATTCCAAACCCAGACGTACTTG...TAGTGGCTTTGTCAGACCTGCTCTCAAAAGTCCAGGCCTGGCTGACCTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS CCA 90 bp | GTCCACTCTGATGATGCAGCAATCCAGGATGGATGGGGTGACAGGTaGGATCTTCAGCATCTTCCCATTCCAGGTGTCCGTACTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHSDDAAIQDGWGDR*DLQHLPIPGVRTPR Trigger: TCTGGGAGTACGGACACCTGGAATGGGAAGATGCTGAAGATCCCACCTGTCACCCCATCCATCCTGGATTGCTGCATCATCAGAGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
||
| CDS CCA 90 bp | ATCCACGTGACTGACAACCTGGAGCTCTCGTCTGACGCTCTGATCTaGAACTTGGGGTCGTTCCAAAACAGCCCTCACACAGTACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IHVTDNLELSSDALI*NLGSFQNSPHTVLN Trigger: ATTCAGTACTGTGTGAGGGCTGTTTTGGAACGACCCCAAGTTCCAGATCAGAGCGTCAGACGAGAGCTCCAGGTTGTCAGTCACGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
||
| CDS GCA 90 bp | GACACAGGACCAGAGGTGAAAAGCCAACAGCCAACCATTTTCTCCTaGGTCTTCAGCATAGGAGTCAATAAGGGCGGTGTGTTGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: DTGPEVKSQQPTIFS*VFSIGVNKGGVLTS Trigger: GGATGTCAACACACCGCCCTTATTGACTCCTATGCTGAAGACGCAGGAGAAAATGGTTGGCTGTTGGCTTTTCACCTCTGGTCCTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
||
| CDS CCA 90 bp | ACCATGTGCCGGACTGTCTTTGTCTTTCCACTAGCCAAGTACGTCTaGGTTTGGAATATGGCTGCCTTGGGAACAACCAGCCGAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TMCRTVFVFPLAKYV*VWNMAALGTTSRDE Trigger: TTCATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCCAAACCCAGACGTACTTGGCTAGTGGAAAGACAAAGACAGTCCGGCACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
||
| CDS TCA 90 bp | AGCTTCTCCGTTACAGTAGCCCTTTCTCTCGATCTTGACGCTCAGTaGCACAGGACCAGAGGTGAAAAGCCAACAGCCAACCATTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSVTVALSLDLDAQ*HRTRGEKPTANHFL Trigger: GAGAAAATGGTTGGCTGTTGGCTTTTCACCTCTGGTCCTGTGTCACTGAGCGTCAAGATCGAGAGAAAGGGCTACTGTAACGGAGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
||
| CDS CCA 90 bp | TGCCGGACTGTCTTTGTCTTTCCACTAGCCAAGTACGTCTGGGTTTaGAATATGGCTGCCTTGGGAACAACCAGCCGAGATGAACAATTT | + |
|
Preference number: 5 (lower is better) Translates to: CRTVFVFPLAKYVWV*NMAALGTTSRDEQF Trigger: AAATTGTTCATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCCAAACCCAGACGTACTTGGCTAGTGGAAAGACAAAGACAGTCCGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
||
| CDS-3UTR CAA 90 bp | GCGCTCCATTTTCTCTCTGTCCACTCCGTACTGTTGCTTTCTTTCCCTCCATTTCCACATCTGCATAATTaGGTGGTGCTTCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALHFLSVHSVLLLSFPPFPHLHN*VVLQAA Trigger: AGCAGCCTGAAGCACCACCAAATTATGCAGATGTGG...AAATGGAGGGAAAGAAAGCAACAGTACGGAGTGGACAGAGAGAAAATGGAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGACCTGGATCCTTGCTATGGTAACATGATAAGAAATCATGAAGACCCCTGGAATATGGCTGCCTaGGGAACAACCAGCCGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKDLDPCYGNMIRNHEDPWNMAA*GTTSRD Trigger: ATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCCA...GGGGTCTTCATGATTTCTTATCATGTTACCATAGCAAGGATCCAGGTCCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGACCTGGATCCTTGCTATGGTAACATGATAAGAAATCATGAAGACCCCTGGTTTCCTCGAACATaGGCAACCATGTGCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SKDLDPCYGNMIRNHEDPWFPRT*ATMCRT Trigger: AGTCCGGCACATGGTTGCCAATGTTCGAGGAAACCA...GGGGTCTTCATGATTTCTTATCATGTTACCATAGCAAGGATCCAGGTCCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
||
| CDS-3UTR CAA 90 bp | TTAGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTACCACTGTCTCGCCGCTaGAGTAGCAGCCCTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEITFAIAWLAALFYVFLPLSRR*SSSPCS Trigger: AGAGCAAGGGCTGCTACTCAAGCGGCGAGACAGTGG...TAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
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| CDS-3UTR CAA 90 bp | AGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATTGGAATATGGCTGCCTaGGGAACAACCAGCCGAGAT | + |
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Preference number: 5 (lower is better) Translates to: RDHICNRMACCSVLCIFNWNMAA*GTTSRD Trigger: ATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCCA...ATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
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| CDS-3UTR CAA 90 bp | AGAGATCACATTTGCAATCGCATGGCTTGCTGCTCTGTTTTATGTATTTTTAATTGGTTTCCTCGAACATaGGCAACCATGTGCCGGACT | + |
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Preference number: 5 (lower is better) Translates to: RDHICNRMACCSVLCIFNWFPRT*ATMCRT Trigger: AGTCCGGCACATGGTTGCCAATGTTCGAGGAAACCA...ATTAAAAATACATAAAACAGAGCAGCAAGCCATGCGATTGCAAATGTGATCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118110.3 |
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| CDS CAA 90 bp | GCTCTGCCGCCTCCAGCAGCACGTGCCCGGCCACTGTCTCGCCGCTaGAGTAGCAGCCCTTGCTCTCATCTTCGAACACTAGCCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: ALPPPAARARPLSRR*SSSPCSHLRTLAPS Trigger: GCTTGGGGCTAGTGTTCGAAGATGAGAGCAAGGGCTGCTACTCAAGCGGCGAGACAGTGGCCGGGCACGTGCTGCTGGAGGCGGCAGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CAA 72 bp | CCTCCAGCAGCACGTGCCCGGCCACTGTCTCGCCGCTaGAGTAGCAGCCCTTGCTCTCATCTTCGAACACTA | + |
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Preference number: 6 (lower is better) Translates to: PPAARARPLSRR*SSSPCSHLRTL Trigger: TAGTGTTCGAAGATGAGAGCAAGGGCTGCTACTCAAGCGGCGAGACAGTGGCCGGGCACGTGCTGCTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CCA 72 bp | AGGGCCAGTGCCAACCAGCACATGTCCATACTGAACTaGCTTGCGACACTGCTGTTTCTGCGGCCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RASANQHMSILN*LATLLFLRPKP Trigger: TGGCTTTGGCCGCAGAAACAGCAGTGTCGCAAGCCAGTTCAGTATGGACATGTGCTGGTTGGCACTGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS GCA 72 bp | CAGTGCCAACCAGCACATGTCCATACTGAACTGGCTTaGGACACTGCTGTTTCTGCGGCCAAAGCCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: QCQPAHVHTELA*DTAVSAAKATV Trigger: TACAGTGGCTTTGGCCGCAGAAACAGCAGTGTCGCAAGCCAGTTCAGTATGGACATGTGCTGGTTGGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS CCA 72 bp | ACTGACAACCTGGAGCTCTCGTCTGACGCTCTGATCTaGAACTTGGGGTCGTTCCAAAACAGCCCTCACACA | + |
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Preference number: 6 (lower is better) Translates to: TDNLELSSDALI*NLGSFQNSPHT Trigger: TGTGTGAGGGCTGTTTTGGAACGACCCCAAGTTCCAGATCAGAGCGTCAGACGAGAGCTCCAGGTTGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CAA 72 bp | AACCTGGAGCTCTCGTCTGACGCTCTGATCTGGAACTaGGGGTCGTTCCAAAACAGCCCTCACACAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: NLELSSDALIWN*GSFQNSPHTVL Trigger: CAGTACTGTGTGAGGGCTGTTTTGGAACGACCCCAAGTTCCAGATCAGAGCGTCAGACGAGAGCTCCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CAA 90 bp | GTGACTGACAACCTGGAGCTCTCGTCTGACGCTCTGATCTGGAACTaGGGGTCGTTCCAAAACAGCCCTCACACAGTACTGAATACTGCC | + |
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Preference number: 6 (lower is better) Translates to: VTDNLELSSDALIWN*GSFQNSPHTVLNTA Trigger: GGCAGTATTCAGTACTGTGTGAGGGCTGTTTTGGAACGACCCCAAGTTCCAGATCAGAGCGTCAGACGAGAGCTCCAGGTTGTCAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS TCA 72 bp | GAAAGGGAAACTCGTGTTTTCCTGGTTGTAACAAGGTaGCACCTTCACCAGCTGGGGCCTCCAGCAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: ERETRVFLVVTR*HLHQLGPPADS Trigger: TGAGTCTGCTGGAGGCCCCAGCTGGTGAAGGTGTCACCTTGTTACAACCAGGAAAACACGAGTTTCCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS TCA 72 bp | AGGCTGGAAACGGAATTCTTGTATGCAGGCAAACATTaGGTAGCAGGCTTCCCCGTCACAGTCAGAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLETEFLYAGKH*VAGFPVTVRGL Trigger: CAGCCCTCTGACTGTGACGGGGAAGCCTGCTACTCAATGTTTGCCTGCATACAAGAATTCCGTTTCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS CAA 72 bp | GAGGCTGGAAACGGAATTCTTGTATGCAGGCAAACATaGAGTAGCAGGCTTCCCCGTCACAGTCAGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: EAGNGILVCRQT*SSRLPRHSQRA Trigger: AGCCCTCTGACTGTGACGGGGAAGCCTGCTACTCAATGTTTGCCTGCATACAAGAATTCCGTTTCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048068.15 |
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| CDS CAA 90 bp | TTCCAGGTGTCCGTACTCCCAGAACCAATGTGGTTTCCTCGAACATaGGCAACCATGTGCCGGACTGTCTTTGTCTTTCCACTAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FQVSVLPEPMWFPRT*ATMCRTVFVFPLAK Trigger: CTTGGCTAGTGGAAAGACAAAGACAGTCCGGCACATGGTTGCCAATGTTCGAGGAAACCACATTGGTTCTGGGAGTACGGACACCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS TCA 72 bp | GTTACAGTAGCCCTTTCTCTCGATCTTGACGCTCAGTaGCACAGGACCAGAGGTGAAAAGCCAACAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: VTVALSLDLDAQ*HRTRGEKPTAN Trigger: GTTGGCTGTTGGCTTTTCACCTCTGGTCCTGTGTCACTGAGCGTCAAGATCGAGAGAAAGGGCTACTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS GCA 72 bp | CCAGAGGTGAAAAGCCAACAGCCAACCATTTTCTCCTaGGTCTTCAGCATAGGAGTCAATAAGGGCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PEVKSQQPTIFS*VFSIGVNKGGV Trigger: CACACCGCCCTTATTGACTCCTATGCTGAAGACGCAGGAGAAAATGGTTGGCTGTTGGCTTTTCACCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CCA 72 bp | CGGACTGTCTTTGTCTTTCCACTAGCCAAGTACGTCTaGGTTTGGAATATGGCTGCCTTGGGAACAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTVFVFPLAKYV*VWNMAALGTTS Trigger: GCTGGTTGTTCCCAAGGCAGCCATATTCCAAACCCAGACGTACTTGGCTAGTGGAAAGACAAAGACAGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CCA 72 bp | CCGTACTCCCAGAACCAATGTGGTTTCCTCGAACATTaGCAACCATGTGCCGGACTGTCTTTGTCTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: PYSQNQCGFLEH*QPCAGLSLSFH Trigger: GTGGAAAGACAAAGACAGTCCGGCACATGGTTGCCAATGTTCGAGGAAACCACATTGGTTCTGGGAGTACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CCA 72 bp | GTCTTTGTCTTTCCACTAGCCAAGTACGTCTGGGTTTaGAATATGGCTGCCTTGGGAACAACCAGCCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: VFVFPLAKYVWV*NMAALGTTSRD Trigger: ATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCCAAACCCAGACGTACTTGGCTAGTGGAAAGACAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS CAA 72 bp | TCCGTACTCCCAGAACCAATGTGGTTTCCTCGAACATaGGCAACCATGTGCCGGACTGTCTTTGTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVLPEPMWFPRT*ATMCRTVFVFP Trigger: TGGAAAGACAAAGACAGTCCGGCACATGGTTGCCAATGTTCGAGGAAACCACATTGGTTCTGGGAGTACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS TCA 72 bp | ACTTGGGGTCGTTCCAAAACAGCCCTCACACAGTACTaGATACTGCCATACTTCCCAGTAAACGATGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: TWGRSKTALTQY*ILPYFPVNDVA Trigger: GGCAACATCGTTTACTGGGAAGTATGGCAGTATTCAGTACTGTGTGAGGGCTGTTTTGGAACGACCCCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS GCA 72 bp | GAACCAATGTGGTTTCCTCGAACATTGGCAACCATGTaGCGGACTGTCTTTGTCTTTCCACTAGCCAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: EPMWFPRTLATM*RTVFVFPLAKY Trigger: GTACTTGGCTAGTGGAAAGACAAAGACAGTCCGGCACATGGTTGCCAATGTTCGAGGAAACCACATTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS TCA 72 bp | CCAGTAAACGATGTTGCCAAAGGTTCAGACGGAAGCTaGAAGCGAAAGGGAAACTCGTGTTTTCCTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PVNDVAKGSDGS*KRKGNSCFPGC Trigger: ACAACCAGGAAAACACGAGTTTCCCTTTCGCTTTCAGCTTCCGTCTGAACCTTTGGCAACATCGTTTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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| CDS TCA 72 bp | TTGGAATATGGCTGCCTTGGGAACAACCAGCCGAGATaGACAATTTTCTATTTCTGCATAGATAGGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: LEYGCLGNNQPR*TIFYFCIDRDS Trigger: GCTATCCCTATCTATGCAGAAATAGAAAATTGTTCATCTCGGCTGGTTGTTCCCAAGGCAGCCATATTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048068.15 ENSMUST00000118110.3 |
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