Pregenerated sensors for ARRDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002910Ensembl transcript IDs: ENSMUST00000002989.11, ENSMUST00000212405.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGAGGCTGCAGGTTCTGAACATGGCAGATCACAACTGCAGCTCTaGGTTCACCTGGGCCACCAGTTCACAAAAGCTGGAGCCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: REAAGSEHGRSQLQL*VHLGHQFTKAGASG Trigger: TCCAGAGGCTCCAGCTTTTGTGAACTGGTGGCCCAGGTGAACCCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR TCA 90 bp | GATGTACTTGTCTGTATCCTGACCCCTGAGGGAGGCTGCAGGTTCTaGACATGGCAGATCACAACTGCAGCTCTGGGTTCACCTGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: DVLVCILTPEGGCRF*TWQITTAALGSPGP Trigger: TGGCCCAGGTGAACCCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCTCAGGGGTCAGGATACAGACAAGTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR TCA 90 bp | CTGCCCCAGTTGCCTGTTCTCCTTGCGATGTACTTGTCTGTATCCTaGCCCCTGAGGGAGGCTGCAGGTTCTGAACATGGCAGATCACAA | + |
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Preference number: 1 (lower is better) Translates to: LPQLPVLLAMYLSVS*PLREAAGSEHGRSQ Trigger: TTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCTCAGGGGTCAGGATACAGACAAGTACATCGCAAGGAGAACAGGCAACTGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 90 bp | CCTGCTAACCTCACAGTGAGGCCATGTCTAAGACACCTTAATGCCTaGGCTCCCAACCGTAGGAAGAAGGAATGGGCGCTATCTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PANLTVRPCLRHLNA*APNRRKKEWALSAL Trigger: CAGAGCAGATAGCGCCCATTCCTTCTTCCTACGGTTGGGAGCCCAGGCATTAAGGTGTCTTAGACATGGCCTCACTGTGAGGTTAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR TCA 90 bp | AGTTGCCTGTTCTCCTTGCGATGTACTTGTCTGTATCCTGACCCCTaGGGGAGGCTGCAGGTTCTGAACATGGCAGATCACAACTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SCLFSLRCTCLYPDP*GRLQVLNMADHNCS Trigger: GCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCTCAGGGGTCAGGATACAGACAAGTACATCGCAAGGAGAACAGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 90 bp | AGAACCAGAAGCTTTGAGAAGATGGACTGTCCTTGGAAGCCATGCTaGTCCTTTGCAATGTTGGGAGACACATTGCCTCATTTAACCCTG | + |
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Preference number: 1 (lower is better) Translates to: RTRSFEKMDCPWKPC*SFAMLGDTLPHLTL Trigger: CAGGGTTAAATGAGGCAATGTGTCTCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 90 bp | CAGAGAACCAGAAGCTTTGAGAAGATGGACTGTCCTTGGAAGCCATaGTGCTCCTTTGCAATGTTGGGAGACACATTGCCTCATTTAACC | + |
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Preference number: 1 (lower is better) Translates to: QRTRSFEKMDCPWKP*CSFAMLGDTLPHLT Trigger: GGTTAAATGAGGCAATGTGTCTCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCCAGCTGCCCCCAGTTGCCTGTTCTCCTTGTGATGTCCCCAGCTGCCCCGGGCGCTATCTGCTCTaGCCATTTCCTCTGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: FAQLPPVACSPCDVPSCPGRYLL*PFPLCL Trigger: CAAGCACAGAGGAAATGGTCAGAGCAGATAGCGCCC...GGGGCAGCTGGGGACATCACAAGGAGAACAGGCAACTGGGGGCAGCTGGGCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTGCCTGTTCTCCTTGTGATGTCCCCAGCTGCCCCAGTTGCCTGTTCTCCCCTTGGAAGCCATGCTaGTCCTTTGCAATGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PVACSPCDVPSCPSCLFSPWKPC*SFAMLG Trigger: TCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGG...GGAGAACAGGCAACTGGGGCAGCTGGGGACATCACAAGGAGAACAGGCAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGGAGCCGAGCATTGCTCCACAGCCTCGTTGGTGGGTCTAAACGCAGAGGAAGCTTTGAGAAGATaGACTGTCCTTGGAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PRGAEHCSTASLVGLNAEEALRR*TVLGSH Trigger: ATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTC...CTCTGCGTTTAGACCCACCAACGAGGCTGTGGAGCAATGCTCGGCTCCTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CAA 90 bp | GAATGGGCGCTATCTGCTCTGACCATTTCCTCTGTGCTTGTCTGCTaGCTGAGCTCCTGTTCATATCTCAAAGCCTCAGCCGAAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: EWALSALTISSVLVC*LSSCSYLKASAEMP Trigger: GGGCATTTCGGCTGAGGCTTTGAGATATGAACAGGAGCTCAGCAAGCAGACAAGCACAGAGGAAATGGTCAGAGCAGATAGCGCCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR CCA 90 bp | ATTGAAATGGCAAGTCCCTGGCAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCGCTCCTTTGCAATGTTaGGAGACACATTGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: IEMASPWQVWDVGDLPSCAPLQC*ETHCLI Trigger: AATGAGGCAATGTGTCTCCCAACATTGCAAAGGAGC...GCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGGGACTTGCCATTTCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCTGGACTTCTAGCTGGTTCTGGTTCCTTGAGACTGGAAGTGTCCATTCCGAGAACCAGAAGCTTTaGGAAGATGGACTGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PLWTSSWFWFLETGSVHSENQKL*EDGLSL Trigger: CAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTC...GGAATGGACACTTCCAGTCTCAAGGAACCAGAACCAGCTAGAAGTCCAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGGACCTTCAGGTCCCAATGACTTCTCCTTTGTGTCTGTCCCTGAGCCCTCTCTCTGGACTTCTAGCTaGTTCTGGTTCCTTGAGACT | + |
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Preference number: 2 (lower is better) Translates to: SGPSGPNDFSFVSVPEPSLWTSS*FWFLET Trigger: AGTCTCAAGGAACCAGAACCAGCTAGAAGTCCAGAG...AGAGGGCTCAGGGACAGACACAAAGGAGAAGTCATTGGGACCTGAAGGTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR GCA 90 bp | GAAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCTGGTTCTGGGCCATGCTGCTCCTTTaGAATGTTGGGAGACACATT | + |
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Preference number: 2 (lower is better) Translates to: EMPFGSLLSPLWTSSWFWAMLLL*NVGRHI Trigger: AATGTGTCTCCCAACATTGCAAAGGAGCAGCATGGC...CCAGAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | CCATTGAAATGGCAAGTCCCTGGCAGGTCTGGGATGTaGGGGATTTGCCCAGCTGCCCCCAGTTGCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PLKWQVPGRSGM*GICPAAPSCLF Trigger: GAACAGGCAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGGGACTTGCCATTTCAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCCCCCAGTTGCCTGTTCGCTGGTTCTGGTTCCTaGAGACTGGAAGTGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: PGRSGMWGICPAAPSCLFAGSGS*RLEVSI Trigger: AATGGACACTTCCAGTCTCAAGGAACCAGAACCAGC...GAACAGGCAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | CTTCAGACCATTGAAATGGCAAGTCCCTGGCAGGTCTaGGATGTGGGGGATTTGCCCAGCTGCCCCCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: LQTIEMASPWQV*DVGDLPSCPQL Trigger: CAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGGGACTTGCCATTTCAATGGTCTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | GGGAGGCTGCAGGTTCTGAACATGGCAGATCACAACTaGAGCTCTGGGTTCACCTGGGCCACCAGTTCACAA | + |
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Preference number: 3 (lower is better) Translates to: GRLQVLNMADHN*SSGFTWATSSQ Trigger: TTGTGAACTGGTGGCCCAGGTGAACCCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | CCCCCAGTTGCCTGTTCTCCTTGTGATGTCCCCAGCTaGCCCAGTTGCCTGTTCTCCTTGCGATGTACTTGT | + |
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Preference number: 3 (lower is better) Translates to: PPVACSPCDVPS*PSCLFSLRCTC Trigger: ACAAGTACATCGCAAGGAGAACAGGCAACTGGGGCAGCTGGGGACATCACAAGGAGAACAGGCAACTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR TCA 72 bp | GTCTGTATCCTGACCCCTGAGGGAGGCTGCAGGTTCTaGACATGGCAGATCACAACTGCAGCTCTGGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: VCILTPEGGCRF*TWQITTAALGS Trigger: TGAACCCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCTCAGGGGTCAGGATACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | TCTCCCAAACTACAGTTCCCTAGAGGAGCCGAGCATTaGTCCACAGCCTCGTTGGTGGGTCTAAACGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SPKLQFPRGAEH*STASLVGLNAE Trigger: CTCTGCGTTTAGACCCACCAACGAGGCTGTGGAGCAATGCTCGGCTCCTCTAGGGAACTGTAGTTTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR TCA 72 bp | TTGCCTGTTCTCCTTGCGATGTACTTGTCTGTATCCTaGCCCCTGAGGGAGGCTGCAGGTTCTGAACATGGC | + |
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Preference number: 3 (lower is better) Translates to: LPVLLAMYLSVS*PLREAAGSEHG Trigger: GCCATGTTCAGAACCTGCAGCCTCCCTCAGGGGTCAGGATACAGACAAGTACATCGCAAGGAGAACAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | GCCTGTTCTCCTTGTGATGTCCCCAGCTGCCCCAGTTaGCTGTTCTCCTTGCGATGTACTTGTCTGTATCCT | + |
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Preference number: 3 (lower is better) Translates to: ACSPCDVPSCPS*LFSLRCTCLYP Trigger: AGGATACAGACAAGTACATCGCAAGGAGAACAGGCAACTGGGGCAGCTGGGGACATCACAAGGAGAACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | CTCACAGTGAGGCCATGTCTAAGACACCTTAATGCCTaGGCTCCCAACCGTAGGAAGAAGGAATGGGCGCTA | + |
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Preference number: 3 (lower is better) Translates to: LTVRPCLRHLNA*APNRRKKEWAL Trigger: TAGCGCCCATTCCTTCTTCCTACGGTTGGGAGCCCAGGCATTAAGGTGTCTTAGACATGGCCTCACTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | GCAGGTTCTGAACATGGCAGATCACAACTGCAGCTCTaGGTTCACCTGGGCCACCAGTTCACAAAAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: AGSEHGRSQLQL*VHLGHQFTKAG Trigger: TCCAGCTTTTGTGAACTGGTGGCCCAGGTGAACCCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | GCCGAAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTaGACTTCTAGCTGGTTCTGGTTCCTTGAGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: AEMPFGSLLSPL*TSSWFWFLETG Trigger: TCCAGTCTCAAGGAACCAGAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR TCA 72 bp | TCGTTGGTGGGTCTAAACGCAGAGAACCAGAAGCTTTaGGAAGATGGACTGTCCTTGGAAGCCATGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: SLVGLNAENQKL*EDGLSLEAMLL Trigger: GAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTCTGCGTTTAGACCCACCAACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR CAA 90 bp | GCCGAAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCTGGTTCATGTTGGGAGACACATaGCCTCATTTAACCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: AEMPFGSLLSPLWTSSWFMLGDT*PHLTLC Trigger: ACACAGGGTTAAATGAGGCAATGTGTCTCCCAACAT...GAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR-3UTR CAA 90 bp | CCCCTCTGGACTTCTAGCTGGTTCTGGTTCCTTGAGACTGGAAGTGTCCATTCCAGAGAACCAGAAGCTTaGAGAAGATGGACTGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PLWTSSWFWFLETGSVHSREPEA*RRWTVL Trigger: AAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTCT...GGAATGGACACTTCCAGTCTCAAGGAACCAGAACCAGCTAGAAGTCCAGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | GCGCTATCTGCTCTGACCATTTCCTCTGTGCTTGTCTaGTTGCTGAGCTCCTGTTCATATCTCAAAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: ALSALTISSVLV*LLSSCSYLKAS Trigger: TGAGGCTTTGAGATATGAACAGGAGCTCAGCAAGCAGACAAGCACAGAGGAAATGGTCAGAGCAGATAGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | ACATTGCCTCATTTAACCCTGTGTTCCCAAAGCAGATaGCGGGACTTCATGGCCAAAGAGTGTGAACCTGGT | + |
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Preference number: 3 (lower is better) Translates to: TLPHLTLCSQSR*RDFMAKECEPG Trigger: ACCAGGTTCACACTCTTTGGCCATGAAGTCCCGCCATCTGCTTTGGGAACACAGGGTTAAATGAGGCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | CAGAGAACCAGAAGCTTTGAGAAGATGGACTGTCCTTaGAAGCCATGCTGCTCCTTTGCAATGTTGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: QRTRSFEKMDCP*KPCCSFAMLGD Trigger: GTCTCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | GGGTCTAAACGCAGAGAACCAGAAGCTTTGAGAAGATaGACTGTCCTTGGAAGCCATGCTGCTCCTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GSKRREPEALRR*TVLGSHAAPLQ Trigger: TTGCAAAGGAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTCTGCGTTTAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | AGCTTTGAGAAGATGGACTGTCCTTGGAAGCCATGCTaGTCCTTTGCAATGTTGGGAGACACATTGCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SFEKMDCPWKPC*SFAMLGDTLPH Trigger: ATGAGGCAATGTGTCTCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR GCA 72 bp | AGAAGCTTTGAGAAGATGGACTGTCCTTGGAAGCCATaGTGCTCCTTTGCAATGTTGGGAGACACATTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RSFEKMDCPWKP*CSFAMLGDTLP Trigger: AGGCAATGTGTCTCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CCA 72 bp | ATATATAAAAGTGAACAATTCTTCAGACCATTGAAATaGCAAGTCCCTGGCAGGTCTGGGATGTGGGGGATT | + |
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Preference number: 3 (lower is better) Translates to: IYKSEQFFRPLK*QVPGRSGMWGI Trigger: AATCCCCCACATCCCAGACCTGCCAGGGACTTGCCATTTCAATGGTCTGAAGAATTGTTCACTTTTATATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | GATTTGCCCAGCTGCCCCCAGTTGCCTGTTCTCCTTGTGATGTCCCCAGCTGCCCTTCCGGGCGCAGCGTaGAGGGACCCATGGCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: DLPSCPQLPVLLVMSPAALPGAA*RDPWPV Trigger: CACCGGCCATGGGTCCCTGCACGCTGCGCCCGGAAG...GGCAGCTGGGGACATCACAAGGAGAACAGGCAACTGGGGGCAGCTGGGCAAATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CCTAGAGGAGCCGAGCATTGCTCCACAGCCTCGTTGGTGGGTCTAAACGCAGAGTGCTGGAGCCCGCGCTaGGCGACTCCGTCCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: PRGAEHCSTASLVGLNAECWSPR*ATPSSA Trigger: CGCACTGGACGGAGTCGCGCAGCGCGGGCTCCAGCA...CTCTGCGTTTAGACCCACCAACGAGGCTGTGGAGCAATGCTCGGCTCCTCTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CCA 90 bp | CAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCCCCCAGTTGCCTGTTCTCCTTTCCCGGGCTCCAGCCTaGGGTTCCAGCAGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QVWDVGDLPSCPQLPVLLSRAPA*GSSRAG Trigger: ACCTGCCCTGCTGGAACCCCAGGCTGGAGCCCGGGA...AAGGAGAACAGGCAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR TCA 90 bp | CCTAGAGGAGCCGAGCATTGCTCCACAGCCTCGTTGGTGGGTCTAAACGCAGAGGGGGGACCGTGCCTATaGCCAGAGGCAGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PRGAEHCSTASLVGLNAEGGPCL*PEAAPA Trigger: TGCTGGAGCTGCCTCTGGTCATAGGCACGGTCCCCC...CTCTGCGTTTAGACCCACCAACGAGGCTGTGGAGCAATGCTCGGCTCCTCTAGG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CCTAGAGGAGCCGAGCATTGCTCCACAGCCTCGTTGGTGGGTCTAAACGCAGAGCACAGGCCCCAGTCTTaGAGGAAGCTGGCGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRGAEHCSTASLVGLNAEHRPQS*RKLARL Trigger: CAGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTG...CTCTGCGTTTAGACCCACCAACGAGGCTGTGGAGCAATGCTCGGCTCCTCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR TCA 90 bp | CCCCTGAGGGAGGCTGCAGGTTCTGAACATGGCAGATCACAACTGCAGCTCTGGTGGCCTCACAGCCTCTaGGGGTGGGTTAGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PLREAAGSEHGRSQLQLWWPHSL*GWVRVL Trigger: GAGGACCCTAACCCACCCTCAGAGGCTGTGAGGCCA...CCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCTCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CCCAATGACTTCTCCTTTGTGTCTGTCCCTGAGCCCTCTGCCCTGCTAACCTCACAACAGTACCCGGCCTaGCACGGCCTGGCCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: PNDFSFVSVPEPSALLTSQQYPA*HGLASV Trigger: CACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTG...TGAGGTTAGCAGGGCAGAGGGCTCAGGGACAGACACAAAGGAGAAGTCATTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CCA 90 bp | ATTGAAATGGCAAGTCCCTGGCAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCAGCAGCGTGGCGCGGTaGTTCACGACTTCCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: IEMASPWQVWDVGDLPSCSSVAR*FTTSTR Trigger: GCGCGTGGAAGTCGTGAACCACCGCGCCACGCTGCT...GCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGGGACTTGCCATTTCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CAA 72 bp | ATGGCAAGTCCCTGGCAGGTCTGGGATGTGGGGGATTaGCCCAGCTGCCCCCAGTTGCCTGTTCTCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: MASPWQVWDVGD*PSCPQLPVLLV Trigger: CACAAGGAGAACAGGCAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGGGACTTGCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCCCCCAGTTGCCTGTTCTCCTTGGACGCTGCCGTGTTTaGCCTCGAAGGATGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: QVWDVGDLPSCPQLPVLLGRCRV*PRRMSP Trigger: TGGTGACATCCTTCGAGGGCAAACACGGCAGCGTCC...AAGGAGAACAGGCAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CCAGTTGCCTGTTCTCCTTGTGATGTCCCCAGCTGCCCCAGTTGCCTGTTCTCCTGGAATAGCGGACGCTaGCGTGTTTGCCCTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PVACSPCDVPSCPSCLFSWNSGR*RVCPRR Trigger: CCTTCGAGGGCAAACACGGCAGCGTCCGCTATTCCA...GGAGAACAGGCAACTGGGGCAGCTGGGGACATCACAAGGAGAACAGGCAACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CCCCTGAGGGAGGCTGCAGGTTCTGAACATGGCAGATCACAACTGCAGCTCTGGACACGAGGCCACGTGTaGAGTACCAGGATCGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PLREAAGSEHGRSQLQLWTRGHV*STRIVP Trigger: TGGCACGATCCTGGTACTGCACACGTGGCCTCGTGT...CCAGAGCTGCAGTTGTGATCTGCCATGTTCAGAACCTGCAGCCTCCCTCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CCA 90 bp | AAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCTGGTTCTGGTACGGCCTGGCCTCCGTaGAACACGGGCTCGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCPLEVFCLPSGLLAGSGTAWPP*NTGSVP Trigger: GGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGT...ACCAGAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | CTGGACCTTCAGGTCCCAATGACTTCTCCTTTGTGTCTGTCCCTGAGCCCTCTGTCTGAGTATAAGCAGTaGTGGAGCCCGCGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDLQVPMTSPLCLSLSPLSEYKQ*WSPRCA Trigger: CGCGCAGCGCGGGCTCCAGCACTGCTTATACTCAGA...CAGAGGGCTCAGGGACAGACACAAAGGAGAAGTCATTGGGACCTGAAGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CCA 90 bp | ATTGAAATGGCAAGTCCCTGGCAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCGCTCCAGCAGCAGCTTaGACGAGCCTGGAATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IEMASPWQVWDVGDLPSCAPAAA*TSLECP Trigger: TGGACATTCCAGGCTCGTCCAAGCTGCTGCTGGAGC...GCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGGGACTTGCCATTTCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | GCCGAAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCTGGTTCGCCGATCCATCATGGTaGACAGGCCCCAGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEMPFGSLLSPLWTSSWFADPSW*TGPSLA Trigger: TGCAAGACTGGGGCCTGTGCACCATGATGGATCGGC...GAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CCA 90 bp | GAAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCTGGTTCTGGGAGTATAAGCAGTGCTaGAGCCCGCGCTGCGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: EMPFGSLLSPLWTSSWFWEYKQC*SPRCAT Trigger: AGTCGCGCAGCGCGGGCTCCAGCACTGCTTATACTC...CCAGAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CCA 90 bp | ACAAAAGCTGGAGCCTCTGGACCTTCAGGTCCCAATGACTTCTCCTTTGTGTCTGACGCACATACCAGCTaGCTCTCCCTCACCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TKAGASGPSGPNDFSFVSDAHTS*LSLTTS Trigger: CGAGGTGGTGAGGGAGAGCCAGCTGGTATGTGCGTC...AGACACAAAGGAGAAGTCATTGGGACCTGAAGGTCCAGAGGCTCCAGCTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR GCA 90 bp | GCCGAAATGCCCTTTGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCTGGTTCCTGGAGTGTAGCCTTTaGGGTCAATCTTGGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEMPFGSLLSPLWTSSWFLECSL*GQSWPR Trigger: TCTCGGCCAAGATTGACCGCAAAGGCTACACTCCAG...GAACCAGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR TCA 90 bp | TCCTTGGAAGCCATGCTGCTCCTTTGCAATGTTGGGAGACACATTGCCTCATTTGGGCACCTCGGGCCATaGAGGTCTGTGTCTGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLEAMLLLCNVGRHIASFGHLGP*RSVSVL Trigger: TAGTACAGACACAGACCTTCATGGCCCGAGGTGCCC...AAATGAGGCAATGTGTCTCCCAACATTGCAAAGGAGCAGCATGGCTTCCAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CAA 72 bp | CTCGTTGGTGGGTCTAAACGCAGAGAACCAGAAGCTTaGAGAAGATGGACTGTCCTTGGAAGCCATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVGGSKRREPEA*RRWTVLGSHAA Trigger: AGCAGCATGGCTTCCAAGGACAGTCCATCTTCTCAAAGCTTCTGGTTCTCTGCGTTTAGACCCACCAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CAA 72 bp | CCTGTTCATATCTCAAAGCCTCAGCCGAAATGCCCTTaGGAAGTCTTCTGTCTCCCCTCTGGACTTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVHISKPQPKCP*EVFCLPSGLLA Trigger: AGCTAGAAGTCCAGAGGGGAGACAGAAGACTTCCAAAGGGCATTTCGGCTGAGGCTTTGAGATATGAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CAA 72 bp | TGTCTCCCCTCTGGACTTCTAGCTGGTTCTGGTTCCTaGAGACTGGAAGTGTCCATTCCTAGATTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLPSGLLAGSGS*RLEVSIPRFIS Trigger: AGAGATGAATCTAGGAATGGACACTTCCAGTCTCAAGGAACCAGAACCAGCTAGAAGTCCAGAGGGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| 3UTR CAA 72 bp | TATTTAATATATAAAAGTGAACAATTCTTCAGACCATaGAAATGGCAAGTCCCTGGCAGGTCTGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLIYKSEQFFRP*KWQVPGRSGMW Trigger: CCACATCCCAGACCTGCCAGGGACTTGCCATTTCAATGGTCTGAAGAATTGTTCACTTTTATATATTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | CGCGCCCACGCGTGCCGCGCCCGCAAGCTCCAACAGTACCCGGCCTaGCACGGCCTGGCCTCCGTGGAACACGGGCTCGGTGCCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RAHACRARKLQQYPA*HGLASVEHGLGARA Trigger: CGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTGGAGCTTGCGGGCGCGGCACGCGTGGGCGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | CGTGCCGCGCCCGCAAGCTCCAACAGTACCCGGCCTGCCACGGCCTaGCCTCCGTGGAACACGGGCTCGGTGCCCGTGCGCGCCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAAPASSNSTRPATA*PPWNTGSVPVRAPS Trigger: AGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTGGAGCTTGCGGGCGCGGCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | CGCGCTCGCTGTAACTCTGAGTATAAGCAGTGCTGGAGCCCGCGCTaGGCGACTCCGTCCAGTGCGCGCGCGCGCGGCCCCGAGCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RARCNSEYKQCWSPR*ATPSSARARGPERA Trigger: TGCGCGCTCGGGGCCGCGCGCGCGCGCACTGGACGGAGTCGCGCAGCGCGGGCTCCAGCACTGCTTATACTCAGAGTTACAGCGAGCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | GGTGGGGCCTCTGGCCGATCCATCATGGTGCACAGGCCCCAGTCTTaGAGGAAGCTGGCGCGGCTGCCCACACTAGCGGAGCGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGASGRSIMVHRPQS*RKLARLPTLAERLP Trigger: GGGCAGCCGCTCCGCTAGTGTGGGCAGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | CCCGCAAGCTCCAACAGTACCCGGCCTGCCACGGCCTGGCCTCCGTaGAACACGGGCTCGGTGCCCGTGCGCGCCCCGTCTATCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: PASSNSTRPATAWPP*NTGSVPVRAPSIST Trigger: AGTAGAGATAGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTGGAGCTTGCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | GTACCCGGCCTGCCACGGCCTGGCCTCCGTGGAACACGGGCTCGGTaGCCGTGCGCGCCCCGTCTATCTCTACTACGAACGCCTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPGLPRPGLRGTRAR*PCAPRLSLLRTPSP Trigger: AGGTGAAGGCGTTCGTAGTAGAGATAGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | CTTGGCCGAGAGGGACACGAGGCCACGTGTGCAGTACCAGGATCGTaGCACCTTCTCCCGGGCTCCAGCCTGGGGTTCCAGCAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGREGHEATCAVPGS*HLLPGSSLGFQQGR Trigger: CCTGCCCTGCTGGAACCCCAGGCTGGAGCCCGGGAGAAGGTGGCACGATCCTGGTACTGCACACGTGGCCTCGTGTCCCTCTCGGCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | TCACGACTTCCACGCGCTCGCTGTAACTCTGAGTATAAGCAGTGCTaGAGCCCGCGCTGCGCGACTCCGTCCAGTGCGCGCGCGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPRARCNSEYKQC*SPRCATPSSARARG Trigger: GCCGCGCGCGCGCGCACTGGACGGAGTCGCGCAGCGCGGGCTCCAGCACTGCTTATACTCAGAGTTACAGCGAGCGCGTGGAAGTCGTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | AAACTCGTGGCGTCCAGCGGGAAGCGTGGCGATATCCCCCGAGTCTaGCGCGAGCAGCGTGGCGCGGTGGTTCACGACTTCCACGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLVASSGKRGDIPRV*REQRGAVVHDFHAL Trigger: GAGCGCGTGGAAGTCGTGAACCACCGCGCCACGCTGCTCGCGCCAGACTCGGGGGATATCGCCACGCTTCCCGCTGGACGCCACGAGTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | GGCCTGCCACGGCCTGGCCTCCGTGGAACACGGGCTCGGTGCCCGTaGGCGCCCCGTCTATCTCTACTACGAACGCCTTCACCTTATCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLPRPGLRGTRARCP*APRLSLLRTPSPYR Trigger: TCGATAAGGTGAAGGCGTTCGTAGTAGAGATAGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | GGTTCACGACTTCCACGCGCTCGCTGTAACTCTGAGTATAAGCAGTaGTGGAGCCCGCGCTGCGCGACTCCGTCCAGTGCGCGCGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRLPRARCNSEYKQ*WSPRCATPSSARAR Trigger: GCGCGCGCGCGCACTGGACGGAGTCGCGCAGCGCGGGCTCCAGCACTGCTTATACTCAGAGTTACAGCGAGCGCGTGGAAGTCGTGAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | CCACCTCGGAGTACTCAGGTGGGGCCTCTGGCCGATCCATCATGGTaGACAGGCCCCAGTCTTGCAGGAAGCTGGCGCGGCTGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PPRSTQVGPLADPSW*TGPSLAGSWRGCPH Trigger: GTGTGGGCAGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCGAGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGGTCTGGGATGTGGGGGATTTGCCCAGCTGCCCCCAGTTGCCTGTTCGCACAGGCCCCAGTCTaGCAGGAAGCTGGCGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRSGMWGICPAAPSCLFAQAPV*QEAGAA Trigger: AGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGC...GAACAGGCAACTGGGGGCAGCTGGGCAAATCCCCCACATCCCAGACCTGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | GGGCCCACAGGCTCCCCGTCCACACTGGCCACCACAGCACGCTTCTaGTTGCGGGCACCTCGGGCCATGAAGGTCTGTGTCTGTACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPTGSPSTLATTARF*LRAPRAMKVCVCTR Trigger: CCTAGTACAGACACAGACCTTCATGGCCCGAGGTGCCCGCAAGCAGAAGCGTGCTGTGGTGGCCAGTGTGGACGGGGAGCCTGTGGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | TCACCACCTCGGAGTACTCAGGTGGGGCCTCTGGCCGATCCATCATaGTGCACAGGCCCCAGTCTTGCAGGAAGCTGGCGCGGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPPRSTQVGPLADPS*CTGPSLAGSWRGCP Trigger: TGGGCAGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCGAGGTGGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS TCA 90 bp | CACTGGCCACCACAGCACGCTTCTGCTTGCGGGCACCTCGGGCCATaGAGGTCTGTGTCTGTACTAGGGCAGCACGGGGCTGCACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HWPPQHASACGHLGP*RSVSVLGQHGAAQL Trigger: GAGCTGTGCAGCCCCGTGCTGCCCTAGTACAGACACAGACCTTCATGGCCCGAGGTGCCCGCAAGCAGAAGCGTGCTGTGGTGGCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | AGCCTTTGCGGTCAATCTTGGCCGAGAGGGACACGAGGCCACGTGTaGAGTACCAGGATCGTGCCACCTTCTCCCGGGCTCCAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCGQSWPRGTRGHV*STRIVPPSPGLQPG Trigger: CCCAGGCTGGAGCCCGGGAGAAGGTGGCACGATCCTGGTACTGCACACGTGGCCTCGTGTCCCTCTCGGCCAAGATTGACCGCAAAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS TCA 90 bp | TCCGGGCGCAGCGTGCAGGGACCCATGGCCGGTGCAGAGTGGCTTTaGTGGAATAGCGGACGCTGCCGTGTTTGCCCTCGAAGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRSVQGPMAGAEWL*WNSGRCRVCPRRMS Trigger: TGACATCCTTCGAGGGCAAACACGGCAGCGTCCGCTATTCCATCAAAGCCACTCTGCACCGGCCATGGGTCCCTGCACGCTGCGCCCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | GATGTCACCAGGGAGATAGGCAGCTGGAAGCTGAAGGGAAACTCGTaGCGTCCAGCGGGAAGCGTGGCGATATCCCCCGAGTCTGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: DVTREIGSWKLKGNS*RPAGSVAISPESGA Trigger: CGCGCCAGACTCGGGGGATATCGCCACGCTTCCCGCTGGACGCCACGAGTTTCCCTTCAGCTTCCAGCTGCCTATCTCCCTGGTGACATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | CAGCTGGCTCTCCCTCACCACCTCGGAGTACTCAGGTGGGGCCTCTaGCCGATCCATCATGGTGCACAGGCCCCAGTCTTGCAGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLALPHHLGVLRWGL*PIHHGAQAPVLQEA Trigger: AGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCGAGGTGGTGAGGGAGAGCCAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | CGCACATACCAGCTGGCTCTCCCTCACCACCTCGGAGTACTCAGGTaGGGCCTCTGGCCGATCCATCATGGTGCACAGGCCCCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTYQLALPHHLGVLR*GLWPIHHGAQAPVL Trigger: CAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCGAGGTGGTGAGGGAGAGCCAGCTGGTATGTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | GGCAGTAGCGGAACTCCTGGAGACAGGCAAAGTAGGGCCCTTCTGTaGTCACACCTAGGTCGTGTAGGAGGGAGGAGGGCCCCGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GSSGTPGDRQSRALL*SHLGRVGGRRAPVT Trigger: CGTCACCGGGGCCCTCCTCCCTCCTACACGACCTAGGTGTGACCACAGAAGGGCCCTACTTTGCCTGTCTCCAGGAGTTCCGCTACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | CTGCCGTGTTTGCCCTCGAAGGATGTCACCAGGGAGATAGGCAGCTaGAAGCTGAAGGGAAACTCGTGGCGTCCAGCGGGAAGCGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPCLPSKDVTREIGS*KLKGNSWRPAGSVA Trigger: CGCCACGCTTCCCGCTGGACGCCACGAGTTTCCCTTCAGCTTCCAGCTGCCTATCTCCCTGGTGACATCCTTCGAGGGCAAACACGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 90 bp | TTCAATGACAGTGAACACCTTCCGGGCGCAGCGTGCAGGGACCCATaGCCGGTGCAGAGTGGCTTTGATGGAATAGCGGACGCTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FNDSEHLPGAACRDP*PVQSGFDGIADAAV Trigger: CACGGCAGCGTCCGCTATTCCATCAAAGCCACTCTGCACCGGCCATGGGTCCCTGCACGCTGCGCCCGGAAGGTGTTCACTGTCATTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS TCA 90 bp | CAGCAGCAGCTTGGACGAGCCTGGAATGTCCACGAAGACCTTGAGTaGGTAGTCCACACTAAGCACGCGGCACTGCAAGATGGACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQQLGRAWNVHEDLE*VVHTKHAALQDGRA Trigger: GGCCCGTCCATCTTGCAGTGCCGCGTGCTTAGTGTGGACTACTCACTCAAGGTCTTCGTGGACATTCCAGGCTCGTCCAAGCTGCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | CCTCGGGCCATGAAGGTCTGTGTCTGTACTAGGGCAGCACGGGGCTaGACAGCTCGCGTGGAACCATTGTCAATCTCCGCAAAGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRAMKVCVCTRAARG*TARVEPLSISAKIG Trigger: CCCTATCTTTGCGGAGATTGACAATGGTTCCACGCGAGCTGTGCAGCCCCGTGCTGCCCTAGTACAGACACAGACCTTCATGGCCCGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CAA 90 bp | CTGGAGCCTCTGGACCTTCAGGTCCCAATGACTTCTCCTTTGTGTCTGTCCCTGCGGACGCTGCCGTGTTaGCCCTCGAAGGATGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LEPLDLQVPMTSPLCLSLRTLPC*PSKDVT Trigger: GGTGACATCCTTCGAGGGCAAACACGGCAGCGTCCG...CAGGGACAGACACAAAGGAGAAGTCATTGGGACCTGAAGGTCCAGAGGCTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CAA 90 bp | TCTGGACCTTCAGGTCCCAATGACTTCTCCTTTGTGTCTGTCCCTGAGCCCTCTACAGCACGCTTCTGCTaGCGGGCACCTCGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SGPSGPNDFSFVSVPEPSTARFC*RAPRAM Trigger: CATGGCCCGAGGTGCCCGCAAGCAGAAGCGTGCTGT...AGAGGGCTCAGGGACAGACACAAAGGAGAAGTCATTGGGACCTGAAGGTCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 90 bp | TATGTCCACAGGTTCAATGACAGTGAACACCTTCCGGGCGCAGCGTaGAGGGACCCATGGCCGGTGCAGAGTGGCTTTGATGGAATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YVHRFNDSEHLPGAA*RDPWPVQSGFDGIA Trigger: CGCTATTCCATCAAAGCCACTCTGCACCGGCCATGGGTCCCTGCACGCTGCGCCCGGAAGGTGTTCACTGTCATTGAACCTGTGGACATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS-3UTR CAA 90 bp | AATGACTTCTCCTTTGTGTCTGTCCCTGAGCCCTCTGCCCTGCTAACCTCACAGAGCTCCAGCAGCAGCTaGGACGAGCCTGGAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NDFSFVSVPEPSALLTSQSSSSS*DEPGMS Trigger: GGACATTCCAGGCTCGTCCAAGCTGCTGCTGGAGCT...CTGTGAGGTTAGCAGGGCAGAGGGCTCAGGGACAGACACAAAGGAGAAGTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | GCGTGCCGCGCCCGCAAGCTCCAACAGTACCCGGCCTaGCACGGCCTGGCCTCCGTGGAACACGGGCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: ACRARKLQQYPA*HGLASVEHGLG Trigger: ACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTGGAGCTTGCGGGCGCGGCACGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | TCCAACAGTACCCGGCCTGCCACGGCCTGGCCTCCGTaGAACACGGGCTCGGTGCCCGTGCGCGCCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SNSTRPATAWPP*NTGSVPVRAPS Trigger: AGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | CCCGCAAGCTCCAACAGTACCCGGCCTGCCACGGCCTaGCCTCCGTGGAACACGGGCTCGGTGCCCGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PASSNSTRPATA*PPWNTGSVPVR Trigger: GCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAGGCCGGGTACTGTTGGAGCTTGCGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CAA 90 bp | AGGTGGGGCCTCTGGCCGATCCATCATGGTGCACAGGCCCCAGTCTaGCAGGAAGCTGGCGCGGCTGCCCACACTAGCGGAGCGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RWGLWPIHHGAQAPV*QEAGAAAHTSGAAA Trigger: GGCAGCCGCTCCGCTAGTGTGGGCAGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | CTGCCACGGCCTGGCCTCCGTGGAACACGGGCTCGGTaGCCGTGCGCGCCCCGTCTATCTCTACTACGAACG | + |
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Preference number: 6 (lower is better) Translates to: LPRPGLRGTRAR*PCAPRLSLLRT Trigger: CGTTCGTAGTAGAGATAGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCGTGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | TGTAACTCTGAGTATAAGCAGTGCTGGAGCCCGCGCTaGGCGACTCCGTCCAGTGCGCGCGCGCGCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CNSEYKQCWSPR*ATPSSARARGP Trigger: GGGGCCGCGCGCGCGCGCACTGGACGGAGTCGCGCAGCGCGGGCTCCAGCACTGCTTATACTCAGAGTTACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | CGGCTGCCCACACTAGCGGAGCGGCTGCCCAGAGGATaGAGGGGGACCGTGCCTATGACCAGAGGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLPTLAERLPRG*RGTVPMTRGSS Trigger: GGAGCTGCCTCTGGTCATAGGCACGGTCCCCCTGCATCCTCTGGGCAGCCGCTCCGCTAGTGTGGGCAGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | GCGTCCAGCGGGAAGCGTGGCGATATCCCCCGAGTCTaGCGCGAGCAGCGTGGCGCGGTGGTTCACGACTTC | + |
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Preference number: 6 (lower is better) Translates to: ASSGKRGDIPRV*REQRGAVVHDF Trigger: GAAGTCGTGAACCACCGCGCCACGCTGCTCGCGCCAGACTCGGGGGATATCGCCACGCTTCCCGCTGGACGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | CACGGCGATTCGGGCCCACAGGCTCCCCGTCCACACTaGCCACCACAGCACGCTTCTGCTTGCGGGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: HGDSGPQAPRPH*PPQHASACGHL Trigger: GAGGTGCCCGCAAGCAGAAGCGTGCTGTGGTGGCCAGTGTGGACGGGGAGCCTGTGGGCCCGAATCGCCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002989.11 ENSMUST00000212405.2 |
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| CDS GCA 72 bp | CGGCCTGGCCTCCGTGGAACACGGGCTCGGTGCCCGTaGGCGCCCCGTCTATCTCTACTACGAACGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RPGLRGTRARCP*APRLSLLRTPS Trigger: TGAAGGCGTTCGTAGTAGAGATAGACGGGGCGCGCACGGGCACCGAGCCCGTGTTCCACGGAGGCCAGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | GAGGGACACGAGGCCACGTGTGCAGTACCAGGATCGTaGCACCTTCTCCCGGGCTCCAGCCTGGGGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EGHEATCAVPGS*HLLPGSSLGFQ Trigger: CTGGAACCCCAGGCTGGAGCCCGGGAGAAGGTGGCACGATCCTGGTACTGCACACGTGGCCTCGTGTCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | GGCTCCCCGTCCACACTGGCCACCACAGCACGCTTCTaGTTGCGGGCACCTCGGGCCATGAAGGTCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GSPSTLATTARF*LRAPRAMKVCV Trigger: GACACAGACCTTCATGGCCCGAGGTGCCCGCAAGCAGAAGCGTGCTGTGGTGGCCAGTGTGGACGGGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | CCACGCGCTCGCTGTAACTCTGAGTATAAGCAGTGCTaGAGCCCGCGCTGCGCGACTCCGTCCAGTGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PRARCNSEYKQC*SPRCATPSSAR Trigger: GCGCGCACTGGACGGAGTCGCGCAGCGCGGGCTCCAGCACTGCTTATACTCAGAGTTACAGCGAGCGCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | AGGAGGGAGGAGGGCCCCGGTGACGCACATACCAGCTaGCTCTCCCTCACCACCTCGGAGTACTCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RREEGPGDAHTS*LSLTTSEYSGG Trigger: CCCACCTGAGTACTCCGAGGTGGTGAGGGAGAGCCAGCTGGTATGTGCGTCACCGGGGCCCTCCTCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | TCTGGCCGATCCATCATGGTGCACAGGCCCCAGTCTTaGAGGAAGCTGGCGCGGCTGCCCACACTAGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGRSIMVHRPQS*RKLARLPTLAE Trigger: CTCCGCTAGTGTGGGCAGCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | AGTACTCAGGTGGGGCCTCTGGCCGATCCATCATGGTaGACAGGCCCCAGTCTTGCAGGAAGCTGGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: STQVGPLADPSW*TGPSLAGSWRG Trigger: GCCGCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | CGGAGTACTCAGGTGGGGCCTCTGGCCGATCCATCATaGTGCACAGGCCCCAGTCTTGCAGGAAGCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RSTQVGPLADPS*CTGPSLAGSWR Trigger: GCGCCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | CAGCTGGCTCTCCCTCACCACCTCGGAGTACTCAGGTaGGGCCTCTGGCCGATCCATCATGGTGCACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QLALPHHLGVLR*GLWPIHHGAQA Trigger: GGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCGAGGTGGTGAGGGAGAGCCAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CAA 90 bp | CCCACAGGCTCCCCGTCCACACTGGCCACCACAGCACGCTTCTGCTaGCGGGCACCTCGGGCCATGAAGGTCTGTGTCTGTACTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PTGSPSTLATTARFC*RAPRAMKVCVCTRA Trigger: TGCCCTAGTACAGACACAGACCTTCATGGCCCGAGGTGCCCGCAAGCAGAAGCGTGCTGTGGTGGCCAGTGTGGACGGGGAGCCTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS TCA 72 bp | CCACAGCACGCTTCTGCTTGCGGGCACCTCGGGCCATaGAGGTCTGTGTCTGTACTAGGGCAGCACGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PQHASACGHLGP*RSVSVLGQHGA Trigger: AGCCCCGTGCTGCCCTAGTACAGACACAGACCTTCATGGCCCGAGGTGCCCGCAAGCAGAAGCGTGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | GGTCAATCTTGGCCGAGAGGGACACGAGGCCACGTGTaGAGTACCAGGATCGTGCCACCTTCTCCCGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GQSWPRGTRGHV*STRIVPPSPGL Trigger: GAGCCCGGGAGAAGGTGGCACGATCCTGGTACTGCACACGTGGCCTCGTGTCCCTCTCGGCCAAGATTGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | CTCCCTCACCACCTCGGAGTACTCAGGTGGGGCCTCTaGCCGATCCATCATGGTGCACAGGCCCCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LPHHLGVLRWGL*PIHHGAQAPVL Trigger: CAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAGGCCCCACCTGAGTACTCCGAGGTGGTGAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS TCA 72 bp | AGCGTGCAGGGACCCATGGCCGGTGCAGAGTGGCTTTaGTGGAATAGCGGACGCTGCCGTGTTTGCCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: SVQGPMAGAEWL*WNSGRCRVCPR Trigger: TCGAGGGCAAACACGGCAGCGTCCGCTATTCCATCAAAGCCACTCTGCACCGGCCATGGGTCCCTGCACGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | AGGGAGATAGGCAGCTGGAAGCTGAAGGGAAACTCGTaGCGTCCAGCGGGAAGCGTGGCGATATCCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: REIGSWKLKGNS*RPAGSVAISPE Trigger: CTCGGGGGATATCGCCACGCTTCCCGCTGGACGCCACGAGTTTCCCTTCAGCTTCCAGCTGCCTATCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | AGTGAACACCTTCCGGGCGCAGCGTGCAGGGACCCATaGCCGGTGCAGAGTGGCTTTGATGGAATAGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SEHLPGAACRDP*PVQSGFDGIAD Trigger: GTCCGCTATTCCATCAAAGCCACTCTGCACCGGCCATGGGTCCCTGCACGCTGCGCCCGGAAGGTGTTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CCA 72 bp | GGAACTCCTGGAGACAGGCAAAGTAGGGCCCTTCTGTaGTCACACCTAGGTCGTGTAGGAGGGAGGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GTPGDRQSRALL*SHLGRVGGRRA Trigger: GGCCCTCCTCCCTCCTACACGACCTAGGTGTGACCACAGAAGGGCCCTACTTTGCCTGTCTCCAGGAGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | AGGTTCAATGACAGTGAACACCTTCCGGGCGCAGCGTaGAGGGACCCATGGCCGGTGCAGAGTGGCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RFNDSEHLPGAA*RDPWPVQSGFD Trigger: ATCAAAGCCACTCTGCACCGGCCATGGGTCCCTGCACGCTGCGCCCGGAAGGTGTTCACTGTCATTGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS CAA 72 bp | AGGGCAGCACGGGGCTGCACAGCTCGCGTGGAACCATaGTCAATCTCCGCAAAGATAGGGATGACCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RAARGCTARVEP*SISAKIGMTSP Trigger: AGGCGAGGTCATCCCTATCTTTGCGGAGATTGACAATGGTTCCACGCGAGCTGTGCAGCCCCGTGCTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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| CDS GCA 72 bp | ATGAAGGTCTGTGTCTGTACTAGGGCAGCACGGGGCTaGACAGCTCGCGTGGAACCATTGTCAATCTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: MKVCVCTRAARG*TARVEPLSISA Trigger: TGCGGAGATTGACAATGGTTCCACGCGAGCTGTGCAGCCCCGTGCTGCCCTAGTACAGACACAGACCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002989.11 |
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