Pregenerated sensors for ARRDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026972Ensembl transcript IDs: ENSMUST00000028349.14, ENSMUST00000102935.10, ENSMUST00000132074.2, ENSMUST00000133934.2, ENSMUST00000142887.8, ENSMUST00000144963.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCTGACTGGGGCAGGGCAGGCACCAGGATCTGTTCTTGCCACTaGGCACGCCTCCAGGCCTTGACACCTGTACCCTCCACCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: RADWGRAGTRICSCH*ARLQALTPVPSTSA Trigger: TGCAGAGGTGGAGGGTACAGGTGTCAAGGCCTGGAGGCGTGCTCAGTGGCAAGAACAGATCCTGGTGCCTGCCCTGCCCCAGTCAGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR TCA 90 bp | AGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCTaGGTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: RSGWSTRGHPDSCRS*VAEPGREQRHEALD Trigger: GTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTACTCAGGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| 3UTR CCA 90 bp | TTCTGTAGCAAGCTGGCCACCACAGGGCTGGTGTCCTTGCCTGACTaGTTCTCAATGTCAGCCTGCAGCCGCAGCACCTGTCCCACCACA | + |
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Preference number: 1 (lower is better) Translates to: FCSKLATTGLVSLPD*FSMSACSRSTCPTT Trigger: TGTGGTGGGACAGGTGCTGCGGCTGCAGGCTGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR TCA 90 bp | GGTGGCCTCAGGTGCCTTCATGGAGACCTGGAAAAATGTAGGTATTaGGGAGTCAGGCCAAGGCCACCTAGCCTCAGGCCACCCAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GGLRCLHGDLEKCRY*GVRPRPPSLRPPSP Trigger: AGGGCTGGGTGGCCTGAGGCTAGGTGGCCTTGGCCTGACTCCTCAATACCTACATTTTTCCAGGTCTCCATGAAGGCACCTGAGGCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR TCA 90 bp | CAGGCACCAGGATCTGTTCTTGCCACTGAGCACGCCTCCAGGCCTTaGCACCTGTACCCTCCACCTCTGCAATGGTCCGCACATCATAGA | + |
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Preference number: 1 (lower is better) Translates to: QAPGSVLATEHASRP*HLYPPPLQWSAHHR Trigger: TCTATGATGTGCGGACCATTGCAGAGGTGGAGGGTACAGGTGTCAAGGCCTGGAGGCGTGCTCAGTGGCAAGAACAGATCCTGGTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR GCA 90 bp | CCACTGAGCACGCCTCCAGGCCTTGACACCTGTACCCTCCACCTCTaGAATGGTCCGCACATCATAGATCCAGCGCTTGGCCTTATAGGA | + |
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Preference number: 1 (lower is better) Translates to: PLSTPPGLDTCTLHL*NGPHIIDPALGLIG Trigger: TCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGGTGGAGGGTACAGGTGTCAAGGCCTGGAGGCGTGCTCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR GCA 90 bp | GCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATaGCAAGGCAAAGGCCAGAACCACCGAACAAGGTGGTATGGGTTA | + |
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Preference number: 1 (lower is better) Translates to: AEPGREQRHEALDIP*QGKGQNHRTRWYGL Trigger: TAACCCATACCACCTTGTTCGGTGGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| 3UTR CCA 90 bp | TGGCCTTATAGGATACCTTCTGTAGCAAGCTGGCCACCACAGGGCTaGTGTCCTTGCCTGACTGGTTCTCAATGTCAGCCTGCAGCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: WPYRIPSVASWPPQG*CPCLTGSQCQPAAA Trigger: TGCGGCTGCAGGCTGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGAAGGTATCCTATAAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR CCA 90 bp | TACCCTCCACCTCTGCAATGGTCCGCACATCATAGATCCAGCGCTTaGCCTTATAGGATACCTTCTGTAGCAAGCTGGCCACCACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: YPPPLQWSAHHRSSA*PYRIPSVASWPPQG Trigger: GCCCTGTGGTGGCCAGCTTGCTACAGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGGTGGAGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR GCA 90 bp | CTCGGCCTGGACAGGGACTCAGTGGAGTTTGGTTCACAGCAATATTaGCAACAAATAGTGGGAGAGTCACGGTGGCCTCAGGTGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGLDRDSVEFGSQQY*QQIVGESRWPQVPS Trigger: TGAAGGCACCTGAGGCCACCGTGACTCTCCCACTATTTGTTGGCAATATTGCTGTGAACCAAACTCCACTGAGTCCCTGTCCAGGCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR CCA 90 bp | GTCCCAGGAGAAGACTCTCGGCCTGGACAGGGACTCAGTGGAGTTTaGTTCACAGCAATATTGCCAACAAATAGTGGGAGAGTCACGGTG | + |
|
Preference number: 1 (lower is better) Translates to: VPGEDSRPGQGLSGV*FTAILPTNSGRVTV Trigger: CACCGTGACTCTCCCACTATTTGTTGGCAATATTGCTGTGAACCAAACTCCACTGAGTCCCTGTCCAGGCCGAGAGTCTTCTCCTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCAAAGGCACGAGGCCCTaGACATTCCATGCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RGARSGWSTRGHPDSCRSKGTRP*TFHAKA Trigger: TGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTT...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGATAGGGTCCCAGGAGAAGACTCTCGGCCTGGACAGGGACTCAGTGGAGCCTTCTGTAGCAAGCTaGCCACCACAGGGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LGIGSQEKTLGLDRDSVEPSVAS*PPQGWC Trigger: ACACCAGCCCTGTGGTGGCCAGCTTGCTACAGAAGG...CTCCACTGAGTCCCTGTCCAGGCCGAGAGTCTTCTCCTGGGACCCTATCCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTAGGGATAGGGTCCCAGGAGAAGACTCTCGGCCTGGACAGGGACTCAGTGGCTCAATATCTGGGATaGTGTTCAGGTTCAAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLGIGSQEKTLGLDRDSVAQYLG*CSGSRG Trigger: GCCCCTTGAACCTGAACAGCATCCCAGATATTGAGC...CACTGAGTCCCTGTCCAGGCCGAGAGTCTTCTCCTGGGACCCTATCCCTAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR CAA 90 bp | TCTCGGCCTGGACAGGGACTCAGTGGAGTTTGGTTCACAGCAATATaGCCAACAAATAGTGGGAGAGTCACGGTGGCCTCAGGTGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SRPGQGLSGVWFTAI*PTNSGRVTVASGAF Trigger: GAAGGCACCTGAGGCCACCGTGACTCTCCCACTATTTGTTGGCAATATTGCTGTGAACCAAACTCCACTGAGTCCCTGTCCAGGCCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCTGCAATGGTCCGCACATCATAGATCCAGCGCTTGGCCTTATAGGATACTTCTCAATGTCAGCCTaGAGCCGCAGCACCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLCNGPHIIDPALGLIGYFSMSA*SRSTCP Trigger: GGGACAGGTGCTGCGGCTGCAGGCTGACATTGAGAA...GTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCGCACATCATAGATCCAGCGCTTGGCCTTATAGGATACCTTCTGTAGCAGCTGGTGTCCTTGCCTaGCTGGTTCTCAATGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: WSAHHRSSAWPYRIPSVAAGVLA*LVLNVS Trigger: GCTGACATTGAGAACCAGTCAGGCAAGGACACCAGC...TGCTACAGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCTGCAATGGTCCGCACATCATAGATCCAGCGCTTGGCCTTATAGGATAGGGTTGCTCAATATCTaGGATGCTGTTCAGGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PPLQWSAHHRSSAWPYRIGLLNI*DAVQVQ Trigger: TTGAACCTGAACAGCATCCCAGATATTGAGCAACCC...TATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR-3UTR CCA 90 bp | GCACATCATAGATCCAGCGCTTGGCCTTATAGGATACCTTCTGTAGCAAGCTGGGGGTTGCTCAATATCTaGGATGCTGTTCAGGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: AHHRSSAWPYRIPSVASWGLLNI*DAVQVQ Trigger: TTGAACCTGAACAGCATCCCAGATATTGAGCAACCC...CCAGCTTGCTACAGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGCACATCATAGATCCAGCGCTTGGCCTTATAGGATACCTTCTGTAGCAAGCTACATTTGTGATCCTTaGAAAAACGTGGAGTGTCGA | + |
|
Preference number: 2 (lower is better) Translates to: SAHHRSSAWPYRIPSVASYICDP*KNVECR Trigger: TCGACACTCCACGTTTTTCCAAGGATCACAAATGTA...GCTTGCTACAGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
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| 3UTR TCA 72 bp | TGGGGCAGGGCAGGCACCAGGATCTGTTCTTGCCACTaGGCACGCCTCCAGGCCTTGACACCTGTACCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WGRAGTRICSCH*ARLQALTPVPS Trigger: GGAGGGTACAGGTGTCAAGGCCTGGAGGCGTGCTCAGTGGCAAGAACAGATCCTGGTGCCTGCCCTGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR TCA 72 bp | TGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCTaGGTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAG | + |
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Preference number: 3 (lower is better) Translates to: WSTRGHPDSCRS*VAEPGREQRHE Trigger: CTCGTGCCTTTGCTCTCTACCTGGCTCAGCTACTCAGGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| 3UTR GCA 72 bp | ACGCCTCCAGGCCTTGACACCTGTACCCTCCACCTCTaGAATGGTCCGCACATCATAGATCCAGCGCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TPPGLDTCTLHL*NGPHIIDPALG Trigger: GCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGGTGGAGGGTACAGGTGTCAAGGCCTGGAGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR GCA 72 bp | GGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATaGCAAGGCAAAGGCCAGAACCACCGAACAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GREQRHEALDIP*QGKGQNHRTRW Trigger: CCACCTTGTTCGGTGGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| 3UTR-3UTR CAA 90 bp | AGGGATAGGGTCCCAGGAGAAGACTCTCGGCCTGGACAGGGACTCAGTGGAGTTGTAGTGGAGGCCACATaGGGTTGCTCAATATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RDRVPGEDSRPGQGLSGVVVEAT*GCSISG Trigger: CCCAGATATTGAGCAACCCAATGTGGCCTCCACTAC...AACTCCACTGAGTCCCTGTCCAGGCCGAGAGTCTTCTCCTGGGACCCTATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR CCA 72 bp | AGGATACCTTCTGTAGCAAGCTGGCCACCACAGGGCTaGTGTCCTTGCCTGACTGGTTCTCAATGTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: RIPSVASWPPQG*CPCLTGSQCQP Trigger: AGGCTGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGAAGGTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR TCA 72 bp | AGGTGCCTTCATGGAGACCTGGAAAAATGTAGGTATTaGGGAGTCAGGCCAAGGCCACCTAGCCTCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RCLHGDLEKCRY*GVRPRPPSLRP Trigger: TGGCCTGAGGCTAGGTGGCCTTGGCCTGACTCCTCAATACCTACATTTTTCCAGGTCTCCATGAAGGCACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR CCA 72 bp | AGAGTCACGGTGGCCTCAGGTGCCTTCATGGAGACCTaGAAAAATGTAGGTATTGAGGAGTCAGGCCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RVTVASGAFMET*KNVGIEESGQG Trigger: GCCTTGGCCTGACTCCTCAATACCTACATTTTTCCAGGTCTCCATGAAGGCACCTGAGGCCACCGTGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR CCA 72 bp | CCTCTGCAATGGTCCGCACATCATAGATCCAGCGCTTaGCCTTATAGGATACCTTCTGTAGCAAGCTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PLQWSAHHRSSA*PYRIPSVASWP Trigger: TGGCCAGCTTGCTACAGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR GCA 72 bp | GACAGGGACTCAGTGGAGTTTGGTTCACAGCAATATTaGCAACAAATAGTGGGAGAGTCACGGTGGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: DRDSVEFGSQQY*QQIVGESRWPQ Trigger: CTGAGGCCACCGTGACTCTCCCACTATTTGTTGGCAATATTGCTGTGAACCAAACTCCACTGAGTCCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| 3UTR CCA 72 bp | CTTGGTAGTGGAGGCCACATTGGGTTGCTCAATATCTaGGATGCTGTTCAGGTTCAAGGGGCTCAGGATGTA | + |
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Preference number: 3 (lower is better) Translates to: LGSGGHIGLLNI*DAVQVQGAQDV Trigger: TACATCCTGAGCCCCTTGAACCTGAACAGCATCCCAGATATTGAGCAACCCAATGTGGCCTCCACTACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGTCAGTGCTAGCTGTGAGAACCACATTGCCAGTCTTCACCAGCTTATAGGAGTAGTGGAGGCCACATaGGGTTGCTCAATATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: KVSASCENHIASLHQLIGVVEAT*GCSISG Trigger: CCCAGATATTGAGCAACCCAATGTGGCCTCCACTAC...TCCTATAAGCTGGTGAAGACTGGCAATGTGGTTCTCACAGCTAGCACTGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
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| 3UTR CCA 72 bp | CAGCAATATTGCCAACAAATAGTGGGAGAGTCACGGTaGCCTCAGGTGCCTTCATGGAGACCTGGAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: QQYCQQIVGESR*PQVPSWRPGKM Trigger: CATTTTTCCAGGTCTCCATGAAGGCACCTGAGGCCACCGTGACTCTCCCACTATTTGTTGGCAATATTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCGCTCCCAGGCGCAAGTaGACGGTCCCAGCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSAPRRK*TVPASG Trigger: GCCGCTGGCTGGGACCGTGCACTTGCGCCTGGGAGC...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCTCAAGGCGCTGGTGGTaGGTACTGGGCCCGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSSRRWW*VLGPQS Trigger: GCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGA...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGCTCCCAGGCGCAAGTaGACGGTCCCAGCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQAPRRK*TVPASG Trigger: GCCGCTGGCTGGGACCGTGCACTTGCGCCTGGGAGC...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCTGGCCACCACAGGGCTaGTGTCCTTGCCTGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSWPPQG*CPCLTG Trigger: ACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCA...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR TCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCAGGGCTCAGTGGTGGTaGCAGACACAGAACCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSRAQWW*QTQNPR Trigger: CCTTGGGTTCTGTGTCTGTCACCACCACTGAGCCCT...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCAGCTCGGAAGGGCAGTaGCGCTCCCAGGCGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTSSEGQ*RSQAQV Trigger: CACTTGCGCCTGGGAGCGCCACTGCCCTTCCGAGCT...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGCCTCAGCCTCTTCCTaGGGTGGTGCAGAGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSASASS*GGAEGT Trigger: GGTGCCCTCTGCACCACCCCAGGAAGAGGCTGAGGC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCGCCTCAGCCTCTTCCTaGGGTGGTGCAGAGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTASASS*GGAEGT Trigger: GGTGCCCTCTGCACCACCCCAGGAAGAGGCTGAGGC...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR TCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGCAGGGCTTCCAACCTaGACCCAGGGCTCAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSAGLPT*TQGSVV Trigger: CACCACTGAGCCCTGGGTTCAGGTTGGAAGCCCTGC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR GCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCAGGGCCACTAGCCACTaGCTCAGCCTCTTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSRATSH*LSLFLG Trigger: CCCCAGGAAGAGGCTGAGGCAGTGGCTAGTGGCCCT...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | TCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGAACGTGGAGTGTCGATaGACGCCCTCACCTGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SRGARSGWSTRGHPDSCRNVECR*TPSPGV Trigger: TACACCAGGTGAGGGCGTCCATCGACACTCCACGTT...CCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAATCAAGGCGCTGGTGGTaGGTACTGGGCCCGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQSRRWW*VLGPQS Trigger: GCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGA...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAGGATCAAGGCGCTGGTaGTGGGTACTGGGCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARGSRRW*WVLGPQ Trigger: CTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCC...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCCTTGTCAGCCAGTaGCAGGGAGCTGTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRGARSGWSTRGHPDSCRSLVSQ*QGAVEV Trigger: TACTTCAACAGCTCCCTGTCACTGGCTGACAAGGGA...CCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGACACGCCTCCAGGCCTTaGCACCTGTACCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARHASRP*HLYPPP Trigger: AGGTGGAGGGTACAGGTGTCAAGGCCTGGAGGCGTG...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAAGGGCCACTAGCCACTaGCTCAGCCTCTTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARRATSH*LSLFLG Trigger: CCCCAGGAAGAGGCTGAGGCAGTGGCTAGTGGCCCT...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGCCCGCAGAGCCTTCTaGAAAGTAGGGGACAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSARRAF*KVGDSG Trigger: GCCACTGTCCCCTACTTTGCAGAAGGCTCTGCGGGC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCGTGTCCTTGCCTGACTaGTTCTCAATGTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSVSLPD*FSMSAC Trigger: GCAGGCTGACATTGAGAACCAGTCAGGCAAGGACAC...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCGTGGGAGAGTCACGGTaGCCTCAGGTGCCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTVGESR*PQVPSW Trigger: CCATGAAGGCACCTGAGGCCACCGTGACTCTCCCAC...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCCAAGGGAGCCGACAGTaGCTGCTGCTGAGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTQGSRQ*LLLRVA Trigger: AGCCACTCTCAGCAGCAGCCACTGTCGGCTCCCTTG...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GCACATCATAGATCCAGCGCTTGGCCTTATAGGATACCTTCTGTAGCAAGCTGGGCTCCCAGGCGCAAGTaGACGGTCCCAGCCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHHRSSAWPYRIPSVASWAPRRK*TVPASG Trigger: GCCGCTGGCTGGGACCGTGCACTTGCGCCTGGGAGC...CCAGCTTGCTACAGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142887.8 ENSMUST00000144963.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCCTCAAAAGATGTGGGTaGTGTGGCAGGAAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSLKRCG*CGRKQE Trigger: TTCCTGCTTCCTGCCACAGCACCCACATCTTTTGAG...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCGCTCAATATCTGGGATaGTGTTCAGGTTCAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSAQYLG*CSGSRG Trigger: GCCCCTTGAACCTGAACAGCATCCCAGATATTGAGC...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCCACGGTGGCCTCAGGTaGCTTCATGGAGACCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTHGGLR*LHGDLK Trigger: CTTCAGGTCTCCATGAAGGCACCTGAGGCCACCGTG...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGCCCGCAGAGCCTTCTaGAAAGTAGGGGACAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQARRAF*KVGDSG Trigger: GCCACTGTCCCCTACTTTGCAGAAGGCTCTGCGGGC...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGATCCTTGGAAAAACGTaGAGTGTCGATGGACGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGARSGWSTRGHPDSCRILGKT*SVDGRP Trigger: AGGGCGTCCATCGACACTCCACGTTTTTCCAAGGAT...CCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGATGGCCACCACAGGGCTaGTGTCCTTGCCTGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARWPPQG*CPCLTG Trigger: ACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCA...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGACAAGGGAGCCGACAGTaGCTGCTGCTGAGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARQGSRQ*LLLRVA Trigger: AGCCACTCTCAGCAGCAGCCACTGTCGGCTCCCTTG...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCGCTGGTGTCCTTGCCTaGCTGGTTCTCAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTAGVLA*LVLNVS Trigger: GCTGACATTGAGAACCAGTCAGGCAAGGACACCAGC...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAAGGGCTCAGTGGTGGTaGCAGACACAGAACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARRAQWW*QTQNPR Trigger: CCTTGGGTTCTGTGTCTGTCACCACCACTGAGCCCT...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGATTCTCAATGTCAGCCTaGAGCCGCAGCACCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARFSMSA*SRSTCP Trigger: GGGACAGGTGCTGCGGCTGCAGGCTGACATTGAGAA...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAACACGGTGGCCTCAGGTaGCTTCATGGAGACCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQHGGLR*LHGDLK Trigger: CTTCAGGTCTCCATGAAGGCACCTGAGGCCACCGTG...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | CCACATTGGGTTGCTCAATATCTGGGATGCTGTTCAGGTTCAAGGGGCTCAGGAAGCTCGGAAGGGCAGTaGCGCTCCCAGGCGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHWVAQYLGCCSGSRGSGSSEGQ*RSQAQV Trigger: CACTTGCGCCTGGGAGCGCCACTGCCCTTCCGAGCT...TCCTGAGCCCCTTGAACCTGAACAGCATCCCAGATATTGAGCAACCCAATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGACCTTCTGTAGCAAGCTaGCCACCACAGGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARPSVAS*PPQGWC Trigger: ACACCAGCCCTGTGGTGGCCAGCTTGCTACAGAAGG...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028349.14 |
||
| CDS-3UTR TCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTCCCTTGTCAGCCAGTaGCAGGGAGCTGTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSSLVSQ*QGAVEV Trigger: TACTTCAACAGCTCCCTGTCACTGGCTGACAAGGGA...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAGCTGGTGTCCTTGCCTaGCTGGTTCTCAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARAGVLA*LVLNVS Trigger: GCTGACATTGAGAACCAGTCAGGCAAGGACACCAGC...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAATAGGGGTAGCCCCATaGACTGTACTCTGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQIGVAP*TVLWRE Trigger: CTCCCTCCAGAGTACAGTTCATGGGGCTACCCCTAT...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGATGTAGAACACGAGGCTACATTTGTGATCCTTGGAAAAACGTGGAGTGCTCCCAGGCGCAAGTaGACGGTCCCAGCCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQDVEHEATFVILGKTWSAPRRK*TVPASG Trigger: GCCGCTGGCTGGGACCGTGCACTTGCGCCTGGGAGC...ACTCCACGTTTTTCCAAGGATCACAAATGTAGCCTCGTGTTCTACATCCTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
||
| CDS-3UTR CCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGTCCCTCAAAAGATGTaGGTGCTGTGGCAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSVPQKM*VLWQEA Trigger: TGCTTCCTGCCACAGCACCCACATCTTTTGAGGGAC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAATACCTGTAGCAAGCTaGCCACCACAGGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQIPVAS*PPQGWC Trigger: ACACCAGCCCTGTGGTGGCCAGCTTGCTACAGGTAT...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCCATAGATCCAGCGCTTaGCCTTATAGGATACCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGARSGWSTRGHPDSCRSHRSSA*PYRIPV Trigger: TACAGGTATCCTATAAGGCCAAGCGCTGGATCTATG...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | CTTCACCAGCTTATAGGAGAACTTCTTGGTAGTGGAGGCCACATTGGGTTGCTCTCCTCGGAAGGGCAGTaGCGCTCCCAGGCGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLIGELLGSGGHIGLLSSEGQ*RSQAQV Trigger: CACTTGCGCCTGGGAGCGCCACTGCCCTTCCGAGGA...GAGCAACCCAATGTGGCCTCCACTACCAAGAAGTTCTCCTATAAGCTGGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144963.8 |
||
| CDS-3UTR GCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGCTCAATATCTGGGATaGTGTTCAGGTTCAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSAQYLG*CSGSRG Trigger: GCCCCTTGAACCTGAACAGCATCCCAGATATTGAGC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCAAGATGTGGGTGCTGTaGCAGGAAGCAGGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSKMWVL*QEAGTE Trigger: TTCAGTTCCTGCTTCCTGCCACAGCACCCACATCTT...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAGTGTCCTTGCCTGACTaGTTCTCAATGTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARVSLPD*FSMSAC Trigger: GCAGGCTGACATTGAGAACCAGTCAGGCAAGGACAC...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAATCCTTGGAAAAACGTaGAGTGTCGATGGACGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARILGKT*SVDGRP Trigger: AGGGCGTCCATCGACACTCCACGTTTTTCCAAGGAT...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTACATTTGTGATCCTTaGAAAAACGTGGAGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGARSGWSTRGHPDSCRYICDP*KNVECR Trigger: TCGACACTCCACGTTTTTCCAAGGATCACAAATGTA...CCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCGGGTTGCTCAATATCTaGGATGCTGTTCAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTGLLNI*DAVQVQ Trigger: TTGAACCTGAACAGCATCCCAGATATTGAGCAACCC...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCGGACTCAGTGGAGTTTaGTTCACAGCAATATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGTRPWTFHAKAKARTGLSGV*FTAILP Trigger: TGGCAATATTGCTGTGAACCAAACTCCACTGAGTCC...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR GCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGGTTCACAGCAATATTaGCAACAAATAGTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSGSQQY*QQIVGE Trigger: CTCTCCCACTATTTGTTGGCAATATTGCTGTGAACC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGACATAGATCCAGCGCTTaGCCTTATAGGATACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARHRSSA*PYRIPS Trigger: AGAAGGTATCCTATAAGGCCAAGCGCTGGATCTATG...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028349.14 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAGGACTCAGTGGAGTTTaGTTCACAGCAATATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VESKGTRPWTFHAKAKARGLSGV*FTAILP Trigger: TGGCAATATTGCTGTGAACCAAACTCCACTGAGTCC...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR TCA 90 bp | CACATTGCCAGTCTTCACCAGCTTATAGGAGAACTTCTTGGTAGTGGAGGCCACGACCTTGTCAGCCAGTaGCAGGGAGCTGTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIASLHQLIGELLGSGGHDLVSQ*QGAVEV Trigger: TACTTCAACAGCTCCCTGTCACTGGCTGACAAGGTC...GTGGCCTCCACTACCAAGAAGTTCTCCTATAAGCTGGTGAAGACTGGCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGTTCACAGCAATATTaGCAACAAATAGTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAEPGREQRHEALDIPCQGSQQY*QQIVGE Trigger: CTCTCCCACTATTTGTTGGCAATATTGCTGTGAACC...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTACATTTGTGATCCTTaGAAAAACGTGGAGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SNSRGARSGWSTRGHPDSYICDP*KNVECR Trigger: TCGACACTCCACGTTTTTCCAAGGATCACAAATGTA...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
||
| CDS-3UTR CCA 90 bp | AGTGCTAGCTGTGAGAACCACATTGCCAGTCTTCACCAGCTTATAGGAGAACTTAAGATGTGGGTGCTGTaGCAGGAAGCAGGAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: SASCENHIASLHQLIGELKMWVL*QEAGTE Trigger: TTCAGTTCCTGCTTCCTGCCACAGCACCCACATCTT...AAGTTCTCCTATAAGCTGGTGAAGACTGGCAATGTGGTTCTCACAGCTAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGGCCGGCAGACTTCCCTaGTCAGCCAGTGACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRGARSGWSTRGHPDSCRAGRLP*SASDRE Trigger: CTCCCTGTCACTGGCTGACAAGGGAAGTCTGCCGGC...CCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGCACCAGGATCTGTTCTaGCCACTGAGCACGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SRGARSGWSTRGHPDSCRHQDLF*PLSTPP Trigger: TGGAGGCGTGCTCAGTGGCAAGAACAGATCCTGGTG...CCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 90 bp | AGCCCCATGAACTGTACTCTGGAGGGAGGATCAAGGCGCTGGTGGTaGGTACTGGGCCCGCAGAGCCTTCTGCAAAGTAGGGGACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SPMNCTLEGGSRRWW*VLGPQSLLQSRGQW Trigger: CCACTGTCCCCTACTTTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCCTCCCTCCAGAGTACAGTTCATGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 90 bp | GGTAGCCCCATGAACTGTACTCTGGAGGGAGGATCAAGGCGCTGGTaGTGGGTACTGGGCCCGCAGAGCCTTCTGCAAAGTAGGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: GSPMNCTLEGGSRRW*WVLGPQSLLQSRGQ Trigger: CTGTCCCCTACTTTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCCTCCCTCCAGAGTACAGTTCATGGGGCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 90 bp | ACCTGTAGCAAGCTGGCCACCACAGGGCTGGTGTCCTTGCCTGACTaGTTCTCAATGTCAGCCTGCAGCCGCAGCACCTGTCCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: TCSKLATTGLVSLPD*FSMSACSRSTCPTT Trigger: TGTGGTGGGACAGGTGCTGCGGCTGCAGGCTGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCACAGGGCTGGTGTCCTaGCCTGACTGGTTCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: RGARSGWSTRGHPDSCRSTGLVS*PDWFSM Trigger: CATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGT...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | GTAGCTGAGCCAGGTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGCCGGCAGACTTCCCTaGTCAGCCAGTGACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: VAEPGREQRHEALDIPCQAGRLP*SASDRE Trigger: CTCCCTGTCACTGGCTGACAAGGGAAGTCTGCCGGC...TTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTACCTGGCTCAGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | CTGTACCCTCCACCTCTGCAATGGTCCGCACATCATAGATCCAGCGCTTGGCCTTCCAGCCGGCAGACCTaGTCAGCCAGTGACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LYPPPLQWSAHHRSSAWPSSRQT*SASDRE Trigger: CTCCCTGTCACTGGCTGACAAGGTCTGCCGGCTGGA...AGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGGTGGAGGGTACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
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| CDS-3UTR CAA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCCACCAGGATCTGTTCTaGCCACTGAGCACGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SNSRGARSGWSTRGHPDSHQDLF*PLSTPP Trigger: TGGAGGCGTGCTCAGTGGCAAGAACAGATCCTGGTG...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | AGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCTGCAGGTCCGGGACTCAGTGGAGTTaGGTTCACAGCAATATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGARSGWSTRGHPDSCRSGTQWS*VHSNIA Trigger: GGCAATATTGCTGTGAACCAAACTCCACTGAGTCCC...GGACCTGCAGCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS TCA 90 bp | CTTCCCAAAGGGTCCCTCAAAAGATGTGGGTGCCTTGTCAGCCAGTaGCAGGGAGCTGTTGAAGTAGCTCTCCTCCACCACCCATGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPKGSLKRCGCLVSQ*QGAVEVALLHHPCP Trigger: GGGGCATGGGTGGTGGAGGAGAGCTACTTCAACAGCTCCCTGTCACTGGCTGACAAGGCACCCACATCTTTTGAGGGACCCTTTGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132074.2 |
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| CDS CCA 90 bp | GCTTGGCCTTATAGGATACCTGTAGCAAGCTGGCCACCACAGGGCTaGTGTCCTTGCCTGACTGGTTCTCAATGTCAGCCTGCAGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AWPYRIPVASWPPQG*CPCLTGSQCQPAAA Trigger: TGCGGCTGCAGGCTGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGGTATCCTATAAGGCCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | AGTAATTCCAGAGGAGCCAGGAGTGGCTGGTCCACAAGGGGTCATCCCGACAGCGTAGTGGAGGCCACATaGGGTTGCTCAATATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SNSRGARSGWSTRGHPDSVVEAT*GCSISG Trigger: CCCAGATATTGAGCAACCCAATGTGGCCTCCACTAC...GCTGTCGGGATGACCCCTTGTGGACCAGCCACTCCTGGCTCCTCTGGAATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | GTAGAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAGTAGTGGAGGCCACATaGGGTTGCTCAATATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VESKGTRPWTFHAKAKARVVEAT*GCSISG Trigger: CCCAGATATTGAGCAACCCAATGTGGCCTCCACTAC...TCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS-3UTR CAA 90 bp | GAGAGCAAAGGCACGAGGCCCTGGACATTCCATGCCAAGGCAAAGGCCAGAACCGGGACTCAGTGGAGTTaGGTTCACAGCAATATTGCC | + |
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Preference number: 5 (lower is better) Translates to: ESKGTRPWTFHAKAKARTGTQWS*VHSNIA Trigger: GGCAATATTGCTGTGAACCAAACTCCACTGAGTCCC...GGTTCTGGCCTTTGCCTTGGCATGGAATGTCCAGGGCCTCGTGCCTTTGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 90 bp | ACACGAGGCTACATTTGTGATCCTTGGAAAAACGTGGAGTGTCGATaGACGCCCTCACCTGGTGTACAATCTTCCCAAAGGGTCCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: TRGYICDPWKNVECR*TPSPGVQSSQRVPQ Trigger: TTGAGGGACCCTTTGGGAAGATTGTACACCAGGTGAGGGCGTCCATCGACACTCCACGTTTTTCCAAGGATCACAAATGTAGCCTCGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000132074.2 ENSMUST00000133934.2 |
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| CDS CCA 90 bp | TCAAGGGGCTCAGGATGTAGAACACGAGGCTACATTTGTGATCCTTaGAAAAACGTGGAGTGTCGATGGACGCCCTCACCTGGTGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: SRGSGCRTRGYICDP*KNVECRWTPSPGVQ Trigger: TTGTACACCAGGTGAGGGCGTCCATCGACACTCCACGTTTTTCCAAGGATCACAAATGTAGCCTCGTGTTCTACATCCTGAGCCCCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000133934.2 |
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| CDS CCA 90 bp | CAGGATGTAGAACACGAGGCTACATTTGTGATCCTTGGAAAAACGTaGAGTGTCGATGGACGCCCTCACCTGGTGTACAATCTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QDVEHEATFVILGKT*SVDGRPHLVYNLPK Trigger: TTTGGGAAGATTGTACACCAGGTGAGGGCGTCCATCGACACTCCACGTTTTTCCAAGGATCACAAATGTAGCCTCGTGTTCTACATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000132074.2 ENSMUST00000133934.2 |
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| CDS CCA 90 bp | TTTGGTTCACAGCAATATTGCCAACAAATAGTGGGAGAGTCACGGTaGCCTCAGGTGCCTTCATGGAGACCTGAAGGTAATAGTCGATAT | + |
|
Preference number: 5 (lower is better) Translates to: FGSQQYCQQIVGESR*PQVPSWRPEGNSRY Trigger: ATATCGACTATTACCTTCAGGTCTCCATGAAGGCACCTGAGGCCACCGTGACTCTCCCACTATTTGTTGGCAATATTGCTGTGAACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 72 bp | AGCTCTCCTCCACCACCCATGCCCCATCGTTGGCCTTaGTGGAGACCCCACAGGAACCCATGCAGGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPPPPMPHRWP*WRPHRNPCRSP Trigger: GGGTGACCTGCATGGGTTCCTGTGGGGTCTCCACCAAGGCCAACGATGGGGCATGGGTGGTGGAGGAGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000132074.2 ENSMUST00000142887.8 |
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| CDS CCA 72 bp | CTCTGGAGGGAGGATCAAGGCGCTGGTGGTGGGTACTaGGCCCGCAGAGCCTTCTGCAAAGTAGGGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: LWREDQGAGGGY*ARRAFCKVGDS Trigger: ACTGTCCCCTACTTTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCCTCCCTCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS TCA 72 bp | CAGGGCTTCCAACCTGAACCCAGGGCTCAGTGGTGGTaGCAGACACAGAACCCAAGGGAGCCGACAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGFQPEPRAQWW*QTQNPREPTVA Trigger: AGCCACTGTCGGCTCCCTTGGGTTCTGTGTCTGTCACCACCACTGAGCCCTGGGTTCAGGTTGGAAGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS TCA 72 bp | GCCGGCAGACCTTGTCAGCCAGTGACAGGGAGCTGTTaGAGTAGCTCTCCTCCACCACCCATGCCCCATCGT | + |
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Preference number: 6 (lower is better) Translates to: AGRPCQPVTGSC*SSSPPPPMPHR Trigger: ACGATGGGGCATGGGTGGTGGAGGAGAGCTACTTCAACAGCTCCCTGTCACTGGCTGACAAGGTCTGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142887.8 |
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| CDS CCA 72 bp | CCCATGAACTGTACTCTGGAGGGAGGATCAAGGCGCTaGTGGTGGGTACTGGGCCCGCAGAGCCTTCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PMNCTLEGGSRR*WWVLGPQSLLQ Trigger: TTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCCTCCCTCCAGAGTACAGTTCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS TCA 72 bp | GTGCTCTCCAGCCGGCAGACTTCCCTTGTCAGCCAGTaGCAGGGAGCTGTTGAAGTAGCTCTCCTCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLSSRQTSLVSQ*QGAVEVALLHH Trigger: GTGGTGGAGGAGAGCTACTTCAACAGCTCCCTGTCACTGGCTGACAAGGGAAGTCTGCCGGCTGGAGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 72 bp | AACTGTACTCTGGAGGGAGGATCAAGGCGCTGGTGGTaGGTACTGGGCCCGCAGAGCCTTCTGCAAAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: NCTLEGGSRRWW*VLGPQSLLQSR Trigger: CCTACTTTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCCTCCCTCCAGAGTACAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS TCA 72 bp | GCAGACTTCCCTTGTCAGCCAGTGACAGGGAGCTGTTaGAGTAGCTCTCCTCCACCACCCATGCCCCATCGT | + |
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Preference number: 6 (lower is better) Translates to: ADFPCQPVTGSC*SSSPPPPMPHR Trigger: ACGATGGGGCATGGGTGGTGGAGGAGAGCTACTTCAACAGCTCCCTGTCACTGGCTGACAAGGGAAGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS TCA 72 bp | TGGCTCTTGGTGGAGAGAGAAACTGGGTCTGAGAAGTaGGGGCCACTAGCCACTGCCTCAGCCTCTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLLVERETGSEK*GPLATASASSW Trigger: CCAGGAAGAGGCTGAGGCAGTGGCTAGTGGCCCTCACTTCTCAGACCCAGTTTCTCTCTCCACCAAGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 72 bp | ATGAACTGTACTCTGGAGGGAGGATCAAGGCGCTGGTaGTGGGTACTGGGCCCGCAGAGCCTTCTGCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: MNCTLEGGSRRW*WVLGPQSLLQS Trigger: ACTTTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCAGCGCCTTGATCCTCCCTCCAGAGTACAGTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 |
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| CDS CCA 72 bp | TCCAGCGCTTGGCCTTATAGGATACCTGTAGCAAGCTaGCCACCACAGGGCTGGTGTCCTTGCCTGACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAWPYRIPVAS*PPQGWCPCLTG Trigger: ACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGGTATCCTATAAGGCCAAGCGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
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| CDS TCA 72 bp | GGGTCCCTCAAAAGATGTGGGTGCCTTGTCAGCCAGTaGCAGGGAGCTGTTGAAGTAGCTCTCCTCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSLKRCGCLVSQ*QGAVEVALLHH Trigger: GTGGTGGAGGAGAGCTACTTCAACAGCTCCCTGTCACTGGCTGACAAGGCACCCACATCTTTTGAGGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132074.2 |
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| CDS CCA 72 bp | TATAGGATACCTGTAGCAAGCTGGCCACCACAGGGCTaGTGTCCTTGCCTGACTGGTTCTCAATGTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: YRIPVASWPPQG*CPCLTGSQCQP Trigger: AGGCTGACATTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGCTTGCTACAGGTATCCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
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| CDS CCA 72 bp | CCTCTGCAATGGTCCGCACATCATAGATCCAGCGCTTaGCCTTATAGGATACCTGTAGCAAGCTGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PLQWSAHHRSSA*PYRIPVASWPP Trigger: TGGTGGCCAGCTTGCTACAGGTATCCTATAAGGCCAAGCGCTGGATCTATGATGTGCGGACCATTGCAGAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102935.10 |
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| CDS CCA 72 bp | GGTGTACAATCTTCCCAAAGGGTCCCTCAAAAGATGTaGGTGCTGTGGCAGGAAGCAGGAACTGAAAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GVQSSQRVPQKM*VLWQEAGTEKG Trigger: TCCCTTTTCAGTTCCTGCTTCCTGCCACAGCACCCACATCTTTTGAGGGACCCTTTGGGAAGATTGTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000133934.2 ENSMUST00000142887.8 |
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| CDS CCA 72 bp | GAACACGAGGCTACATTTGTGATCCTTGGAAAAACGTaGAGTGTCGATGGACGCCCTCACCTGGTGTACAAT | + |
|
Preference number: 6 (lower is better) Translates to: EHEATFVILGKT*SVDGRPHLVYN Trigger: ATTGTACACCAGGTGAGGGCGTCCATCGACACTCCACGTTTTTCCAAGGATCACAAATGTAGCCTCGTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000132074.2 ENSMUST00000133934.2 |
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| CDS CCA 72 bp | TCAGGATGTAGAACACGAGGCTACATTTGTGATCCTTaGAAAAACGTGGAGTGTCGATGGACGCCCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SGCRTRGYICDP*KNVECRWTPSP Trigger: AGGTGAGGGCGTCCATCGACACTCCACGTTTTTCCAAGGATCACAAATGTAGCCTCGTGTTCTACATCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000132074.2 ENSMUST00000133934.2 |
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| CDS GCA 72 bp | TACAATCTTCCCAAAGGGTCCCTCAAAAGATGTGGGTaGTGTGGCAGGAAGCAGGAACTGAAAAGGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: YNLPKGSLKRCG*CGRKQELKREV Trigger: AACTTCCCTTTTCAGTTCCTGCTTCCTGCCACAGCACCCACATCTTTTGAGGGACCCTTTGGGAAGATTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028349.14 ENSMUST00000102935.10 ENSMUST00000133934.2 ENSMUST00000142887.8 |
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