Pregenerated sensors for ARR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060890Ensembl transcript IDs: ENSMUST00000113769.8, ENSMUST00000164940.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACGCTGTGAGGGGGCCCTaGATGCTGGTGGGTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QWGLPHRIIRDRLSDPLNAVRGP*MLVGSA Trigger: AGCTGAACCCACCAGCATCCAGGGCCCCCTCACAGC...GTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | ATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGCGAGCTGGTAGCCACTaGTCTCTCCCCAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: IRVLQWGLPHRIIRDRLSRAGSH*SLPRRW Trigger: CCATCTCCTGGGGAGAGAGCAGTGGCTACCAGCTCG...CGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | TTATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATGGGGGCCCTGGATGCTaGTGGGTTCAGCTGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLECCSGGFHTELSEIGYGGPGC*WVQLEP Trigger: TGGCTCCAGCTGAACCCACCAGCATCCAGGGCCCCC...ATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | GAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCCTGCTTCTGACAGTTaGCAGCCAGGAGTGGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: ECCSGGFHTELSEIGYRIPASDS*QPGVGL Trigger: TAACCCCACTCCTGGCTGCCAACTGTCAGAAGCAGG...GATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGTCTTCAGGCCCAGGCTaGAGTGTTACTGAACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LECCSGGFHTELSEIGYRSSGPG*SVTEQG Trigger: GCCCTGTTCAGTAACACTGCAGCCTGGGCCTGAAGA...CCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGGAGTTTGCCATCCAGTaGCAGGCCCTGCTTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LECCSGGFHTELSEIGYREFAIQ*QALLLT Trigger: TGTCAGAAGCAGGGCCTGGCACTGGATGGCAAACTC...CCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAGCAGACCTCCTAGAATaGCCCCATAGGACACCACCA | + |
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Preference number: 4 (lower is better) Translates to: CSGGFHTELSEIGYRILLADLLE*PHRTPP Trigger: TGGTGGTGTCCTATGGGGGCATTCTAGGAGGTCTGC...TAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR TCA 90 bp | TGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAAGGCTGCAGTGTTACTaGACAGGGCAGGTTAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: CSGGFHTELSEIGYRILLRLQCY*TGQVSN Trigger: GTTGCTAACCTGCCCTGTTCAGTAACACTGCAGCCT...TAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR TCA 90 bp | GAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCTGGTGTCTTCATGCTTaGGTTTGCCATCCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ECCSGGFHTELSEIGYRIWCLHA*VCHPVP Trigger: TGGCACTGGATGGCAAACTCAAGCATGAAGACACCA...GATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTACCCAGGAGATGGCTTTaGATGGATCAAGATCACGGG | + |
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Preference number: 4 (lower is better) Translates to: CSGGFHTELSEIGYRILLPRRWL*MDQDHG Trigger: CCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGG...TAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | AGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTCAGGAGTGGGGTTACTaGAAAGGTCTGGGAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGGFHTELSEIGYRILLTQEWGY*KGLGEA Trigger: AGCTTCTCCCAGACCTTTGCAGTAACCCCACTCCTG...AGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAGTTTCCCCAGGTAGATaGAAAACTTCCCATTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CSGGFHTELSEIGYRILLVSPGR*KTSHWS Trigger: GCTCCAATGGGAAGTTTTCCATCTACCTGGGGAAAC...TAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR TCA 90 bp | TTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGTGCAGTTGTAGGGGCTaGGATGACAAAAAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LECCSGGFHTELSEIGYRCSCRG*DDKKKL Trigger: AAGCTTCTTTTTGTCATCTCAGCCCCTACAACTGCA...CCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR TCA 90 bp | AGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTGTCTCTGTGAACTCCTaGACAAACACAGTCTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: SGGFHTELSEIGYRILLTVSVNS*TNTVFV Trigger: CACGAAGACTGTGTTTGTTCAGGAGTTCACAGAGAC...AGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | CACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTCTGTCTGCTGTTCCACACCAACATCACTaGCTGGCAGACCTCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: HTELSEIGYRILLTLSAVPHQHH*LADLLE Trigger: TTCTAGGAGGTCTGCCAGCCAGTGATGTTGGTGTGG...AACAGCAGACAGAGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTTCTCTCCCCAGGAGATaGCTTTGGATGGATCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGGFHTELSEIGYRILLTSLPRR*LWMDQD Trigger: ATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGA...AGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | GAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTCCAGATTTTCTaGACAGAAACTCTTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: ECCSGGFHTELSEIGYRILFQIF*TETLHF Trigger: GAAGTGAAGAGTTTCTGTGCAGAAAATCTGGAAGAG...GATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR TCA 90 bp | CACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTCTGTCTGCTGTTCAGCTACTGTCTCTGTaGACTCCTGAACAAACACAG | + |
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Preference number: 4 (lower is better) Translates to: HTELSEIGYRILLTLSAVQLLSL*TPEQTQ Trigger: CTGTGTTTGTTCAGGAGTTCACAGAGACAGTAGCTG...AACAGCAGACAGAGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGTGTGGTCTGGACAACTaGAATCTTGATTCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LECCSGGFHTELSEIGYRCGLDN*NLDSSD Trigger: ATCAGAAGAATCAAGATTGCAGTTGTCCAGACCACA...CCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | AGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTAGATTGGTGTCTTCATaGTTGAGTTTGCCATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGGFHTELSEIGYRILLTRLVSS*LSLPSS Trigger: ACTGGATGGCAAACTCAAGCATGAAGACACCAATCT...AGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR GCA 90 bp | GATTTATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCGTACATAGAGATCTTTaGGAAATGTCAGACCAATCA | + |
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Preference number: 4 (lower is better) Translates to: DLLECCSGGFHTELSEIGVHRDL*EMSDQS Trigger: TGATTGGTCTGACATTTCGCAAAGATCTCTATGTAC...GCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAATAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CCA 90 bp | AATGATTTATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAACAGGACAACATCTGTaGTCTGGACAACTGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: NDLLECCSGGFHTELSEITGQHL*SGQLQS Trigger: AGATTGCAGTTGTCCAGACCACAGATGTTGTCCTGT...TATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAATAAATCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 90 bp | CCGAGCTTGTGCAGAAGCCGCTCCTGTAAGGCTGTGAGGGGGCCCTaGATGCTGGTGGGTTCAGCTGGAGCCACTTGCTTGGTTTGTACA | + |
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Preference number: 5 (lower is better) Translates to: PSLCRSRSCKAVRGP*MLVGSAGATCLVCT Trigger: TGTACAAACCAAGCAAGTGGCTCCAGCTGAACCCACCAGCATCCAGGGCCCCCTCACAGCCTTACAGGAGCGGCTTCTGCACAAGCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS CCA 90 bp | GCCATCCAGTGCCAGGCCCTGCTTCTGACAGTTGGCAGCCAGGAGTaGGGTTACTGCAAAGGTCTGGGAGAAGCTGGAGTTAGCAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: AIQCQALLLTVGSQE*GYCKGLGEAGVSSY Trigger: GTAGCTGCTAACTCCAGCTTCTCCCAGACCTTTGCAGTAACCCCACTCCTGGCTGCCAACTGTCAGAAGCAGGGCCTGGCACTGGATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 90 bp | TCCGAGCTGGTAGCCACTGCTCTCTCCCCAGGAGATGGCTTTGGATaGATCAAGATCACGGGCAGCTCCACACCAACATCACTGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: SELVATALSPGDGFG*IKITGSSTPTSLAG Trigger: GCCAGCCAGTGATGTTGGTGTGGAGCTGCCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGAGCAGTGGCTACCAGCTCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 90 bp | GTCCTCCGAGCTGGTAGCCACTGCTCTCTCCCCAGGAGATGGCTTTaGATGGATCAAGATCACGGGCAGCTCCACACCAACATCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: VLRAGSHCSLPRRWL*MDQDHGQLHTNITG Trigger: GCCAGTGATGTTGGTGTGGAGCTGCCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGAGCAGTGGCTACCAGCTCGGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS GCA 90 bp | TGCCAGGCCCTGCTTCTGACAGTTGGCAGCCAGGAGTGGGGTTACTaGAAAGGTCTGGGAGAAGCTGGAGTTAGCAGCTACTGTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: CQALLLTVGSQEWGY*KGLGEAGVSSYCLC Trigger: ACAGAGACAGTAGCTGCTAACTCCAGCTTCTCCCAGACCTTTGCAGTAACCCCACTCCTGGCTGCCAACTGTCAGAAGCAGGGCCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS TCA 90 bp | GCTTCGAATGGTCTGTGCCGAAGGACCAGGGCCGGGTTCCAGGGCTaGAAACTGCACTTTCCGTACAACCAGCTGCACAGAATCACTCTT | + |
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Preference number: 5 (lower is better) Translates to: ASNGLCRRTRAGFQG*KLHFPYNQLHRITL Trigger: AAGAGTGATTCTGTGCAGCTGGTTGTACGGAAAGTGCAGTTTTCAGCCCTGGAACCCGGCCCTGGTCCTTCGGCACAGACCATTCGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS GCA 90 bp | ATGGTCTGTGCCGAAGGACCAGGGCCGGGTTCCAGGGCTGAAAACTaGACTTTCCGTACAACCAGCTGCACAGAATCACTCTTAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: MVCAEGPGPGSRAEN*TFRTTSCTESLLGI Trigger: AATCCCTAAGAGTGATTCTGTGCAGCTGGTTGTACGGAAAGTGCAGTTTTCAGCCCTGGAACCCGGCCCTGGTCCTTCGGCACAGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS GCA 90 bp | CTGCATAAACTCTTCGATGACTATGTCCTCCGAGCTGGTAGCCACTaGTCTCTCCCCAGGAGATGGCTTTGGATGGATCAAGATCACGGG | + |
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Preference number: 5 (lower is better) Translates to: LHKLFDDYVLRAGSH*SLPRRWLWMDQDHG Trigger: CCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGAGCAGTGGCTACCAGCTCGGAGGACATAGTCATCGAAGAGTTTATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 90 bp | TTCGACCTTCTAAGTACTCGGGGTCAACAAGGACGACTCCATCAATaGGCTCCACAGTGTCCACATCATCCACGAAGTCTCGTTTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: FDLLSTRGQQGRLHQ*APQCPHHPRSLVSP Trigger: TGGGGAAACGAGACTTCGTGGATGATGTGGACACTGTGGAGCCCATTGATGGAGTCGTCCTTGTTGACCCCGAGTACTTAGAAGGTCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS-3UTR CAA 90 bp | ACAGAATTATCAGAGATAGGCTATCGGATCCTCTTAACTCTGTCTGCTGTTGGAGCATTGACCCCGAGCTaGTGCAGAAGCCGCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TELSEIGYRILLTLSAVGALTPS*CRSRSC Trigger: ACAGGAGCGGCTTCTGCACAAGCTCGGGGTCAATGC...TCCAACAGCAGACAGAGTTAAGAGGATCCGATAGCCTATCTCTGATAATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CAA 90 bp | GAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCCTCTGTGTCTGGCTGTaGTGCTGCATAAACTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: ECCSGGFHTELSEIGYRILCVWL*CCINSS Trigger: CGAAGAGTTTATGCAGCACAACAGCCAGACACAGAG...GATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CAA 90 bp | GAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGATCATGGAAAACTTCCCATaGGAGCTAGTCTTCTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: ECCSGGFHTELSEIGYRIMENFP*ELVFLN Trigger: GTTTAAGAAGACTAGCTCCAATGGGAAGTTTTCCAT...GATCCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CAA 90 bp | TTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGGTGGACAACTGCAATCTaGATTCTTCTGATGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: LECCSGGFHTELSEIGYRWTTAI*ILLMTL Trigger: CAAGGTCATCAGAAGAATCAAGATTGCAGTTGTCCA...CCGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CAA 90 bp | GATTTATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCAGCCACTTGCTTGGTTaGTACATAGAGATCTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: DLLECCSGGFHTELSEIGSHLLG*YIEIFA Trigger: CGCAAAGATCTCTATGTACAAACCAAGCAAGTGGCT...GCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAATAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CAA 90 bp | ATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATAGGCTATCGACAGTCTTCGTGTACTaGTCTAGTGAATACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: IRVLQWGLPHRIIRDRLSTVFVY*SSEYRT Trigger: TGTCCTGTATTCACTAGACAAGTACACGAAGACTGT...CGATAGCCTATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS-3UTR CAA 90 bp | AATGATTTATTAGAGTGTTGCAGTGGGGGCTTCCACACAGAATTATCAGAGATATTGGTGTCTTCATGCTaGAGTTTGCCATCCAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: NDLLECCSGGFHTELSEILVSSC*SLPSSA Trigger: GGCACTGGATGGCAAACTCAAGCATGAAGACACCAA...TATCTCTGATAATTCTGTGTGGAAGCCCCCACTGCAACACTCTAATAAATCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | TGCAGAAGCCGCTCCTGTAAGGCTGTGAGGGGGCCCTaGATGCTGGTGGGTTCAGCTGGAGCCACTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CRSRSCKAVRGP*MLVGSAGATCL Trigger: CAAGCAAGTGGCTCCAGCTGAACCCACCAGCATCCAGGGCCCCCTCACAGCCTTACAGGAGCGGCTTCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS TCA 72 bp | GGTCTGTGCCGAAGGACCAGGGCCGGGTTCCAGGGCTaGAAACTGCACTTTCCGTACAACCAGCTGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GLCRRTRAGFQG*KLHFPYNQLHR Trigger: TCTGTGCAGCTGGTTGTACGGAAAGTGCAGTTTTCAGCCCTGGAACCCGGCCCTGGTCCTTCGGCACAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | GTTTGCCATCCAGTGCCAGGCCCTGCTTCTGACAGTTaGCAGCCAGGAGTGGGGTTACTGCAAAGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VCHPVPGPASDS*QPGVGLLQRSG Trigger: CCCAGACCTTTGCAGTAACCCCACTCCTGGCTGCCAACTGTCAGAAGCAGGGCCTGGCACTGGATGGCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | CTCCGAGCTGGTAGCCACTGCTCTCTCCCCAGGAGATaGCTTTGGATGGATCAAGATCACGGGCAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LRAGSHCSLPRR*LWMDQDHGQLH Trigger: GTGGAGCTGCCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGAGCAGTGGCTACCAGCTCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS GCA 72 bp | GCCGAAGGACCAGGGCCGGGTTCCAGGGCTGAAAACTaGACTTTCCGTACAACCAGCTGCACAGAATCACTC | + |
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Preference number: 6 (lower is better) Translates to: AEGPGPGSRAEN*TFRTTSCTESL Trigger: GAGTGATTCTGTGCAGCTGGTTGTACGGAAAGTGCAGTTTTCAGCCCTGGAACCCGGCCCTGGTCCTTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | GCTGGTAGCCACTGCTCTCTCCCCAGGAGATGGCTTTaGATGGATCAAGATCACGGGCAGCTCCACACCAAC | + |
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Preference number: 6 (lower is better) Translates to: AGSHCSLPRRWL*MDQDHGQLHTN Trigger: GTTGGTGTGGAGCTGCCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGAGCAGTGGCTACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | GTTGTAGGGGCTGAGATGACAAAAAGAAGCTTCGAATaGTCTGTGCCGAAGGACCAGGGCCGGGTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VVGAEMTKRSFE*SVPKDQGRVPG Trigger: CCCTGGAACCCGGCCCTGGTCCTTCGGCACAGACCATTCGAAGCTTCTTTTTGTCATCTCAGCCCCTACAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | CAGTTGGCAGCCAGGAGTGGGGTTACTGCAAAGGTCTaGGAGAAGCTGGAGTTAGCAGCTACTGTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QLAARSGVTAKV*EKLELAATVSV Trigger: CACAGAGACAGTAGCTGCTAACTCCAGCTTCTCCCAGACCTTTGCAGTAACCCCACTCCTGGCTGCCAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CCA 72 bp | GTAGCCACTGCTCTCTCCCCAGGAGATGGCTTTGGATaGATCAAGATCACGGGCAGCTCCACACCAACATCA | + |
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Preference number: 6 (lower is better) Translates to: VATALSPGDGFG*IKITGSSTPTS Trigger: TGATGTTGGTGTGGAGCTGCCCGTGATCTTGATCCATCCAAAGCCATCTCCTGGGGAGAGAGCAGTGGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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| CDS CAA 90 bp | GGCTGTGAGGGGGCCCTGGATGCTGGTGGGTTCAGCTGGAGCCACTaGCTTGGTTTGTACATAGAGATCTTTGCGAAATGTCAGACCAAT | + |
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Preference number: 6 (lower is better) Translates to: GCEGALDAGGFSWSH*LGLYIEIFAKCQTN Trigger: ATTGGTCTGACATTTCGCAAAGATCTCTATGTACAAACCAAGCAAGTGGCTCCAGCTGAACCCACCAGCATCCAGGGCCCCCTCACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS CCA 72 bp | CTAAGTACTCGGGGTCAACAAGGACGACTCCATCAATaGGCTCCACAGTGTCCACATCATCCACGAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSTRGQQGRLHQ*APQCPHHPRSL Trigger: GAGACTTCGTGGATGATGTGGACACTGTGGAGCCCATTGATGGAGTCGTCCTTGTTGACCCCGAGTACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS CAA 72 bp | GGGGCCCTGGATGCTGGTGGGTTCAGCTGGAGCCACTaGCTTGGTTTGTACATAGAGATCTTTGCGAAATGT | + |
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Preference number: 6 (lower is better) Translates to: GALDAGGFSWSH*LGLYIEIFAKC Trigger: ACATTTCGCAAAGATCTCTATGTACAAACCAAGCAAGTGGCTCCAGCTGAACCCACCAGCATCCAGGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS CAA 90 bp | GGGGCCCTGGATGCTGGTGGGTTCAGCTGGAGCCACTTGCTTGGTTaGTACATAGAGATCTTTGCGAAATGTCAGACCAATCACATCCAA | + |
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Preference number: 6 (lower is better) Translates to: GALDAGGFSWSHLLG*YIEIFAKCQTNHIQ Trigger: TTGGATGTGATTGGTCTGACATTTCGCAAAGATCTCTATGTACAAACCAAGCAAGTGGCTCCAGCTGAACCCACCAGCATCCAGGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS CCA 72 bp | CCTGGATGCTGGTGGGTTCAGCTGGAGCCACTTGCTTaGTTTGTACATAGAGATCTTTGCGAAATGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: PGCWWVQLEPLA*FVHRDLCEMSD Trigger: GTCTGACATTTCGCAAAGATCTCTATGTACAAACCAAGCAAGTGGCTCCAGCTGAACCCACCAGCATCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113769.8 ENSMUST00000164940.2 |
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| CDS TCA 72 bp | AAGCTGGAGTTAGCAGCTACTGTCTCTGTGAACTCCTaGACAAACACAGTCTTCGTGTACTTGTCTAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KLELAATVSVNS*TNTVFVYLSSE Trigger: TTCACTAGACAAGTACACGAAGACTGTGTTTGTTCAGGAGTTCACAGAGACAGTAGCTGCTAACTCCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113769.8 |
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