Pregenerated sensors for ARPP19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007656Ensembl transcript IDs: ENSMUST00000007800.8, ENSMUST00000164467.8, ENSMUST00000166549.2, ENSMUST00000168166.8, ENSMUST00000168301.2, ENSMUST00000169492.8, ENSMUST00000170310.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTGCGTACAGGCAGTGTCCTATTGCATATCAAATGGTGGAGATaGATTGATAGATTTGAGGGCACGATACTAAAGGAGTTAGATCTC | + |
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Preference number: 1 (lower is better) Translates to: PLRTGSVLLHIKWWR*IDRFEGTILKELDL Trigger: GAGATCTAACTCCTTTAGTATCGTGCCCTCAAATCTATCAATGCATCTCCACCATTTGATATGCAATAGGACACTGCCTGTACGCAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR GCA 90 bp | AGTGGAACAGGATCAATCACTAGTGTGGAACCACAGGAAAGCAGGTaGACAAATGTAGTCATGATACAAATGATGCCTGTATTCCATAGG | + |
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Preference number: 1 (lower is better) Translates to: SGTGSITSVEPQESR*TNVVMIQMMPVFHR Trigger: CCTATGGAATACAGGCATCATTTGTATCATGACTACATTTGTGCACCTGCTTTCCTGTGGTTCCACACTAGTGATTGATCCTGTTCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR CCA 90 bp | ATCCCAATTTCTAAAAGTAGCAGTGACAAGTTGGAGAAAGAGTCTTaGGTTGCTGGCAGTTCATGCCAAATGAGATCAAGACGGTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: IPISKSSSDKLEKES*VAGSSCQMRSRRCF Trigger: AAAGCACCGTCTTGATCTCATTTGGCATGAACTGCCAGCAACCCAAGACTCTTTCTCCAACTTGTCACTGCTACTTTTAGAAATTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR CCA 90 bp | ACTGCCAACTCTACAGACATCTTTAACAAGAAAAGGCATTTATGTTaGCCCTCTGCGTACAGGCAGTGTCCTATTGCATATCAAATGGTG | + |
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Preference number: 1 (lower is better) Translates to: TANSTDIFNKKRHLC*PSAYRQCPIAYQMV Trigger: CACCATTTGATATGCAATAGGACACTGCCTGTACGCAGAGGGCCAACATAAATGCCTTTTCTTGTTAAAGATGTCTGTAGAGTTGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR TCA 90 bp | ATTGGCAATGTGGAGTGTAAATTATGTTGCTTTTCTGCCTCACATTaGGTGGAACAGGATCAATCACTAGTGTGGAACCACAGGAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: IGNVECKLCCFSASH*VEQDQSLVWNHRKA Trigger: TGCTTTCCTGTGGTTCCACACTAGTGATTGATCCTGTTCCACTCAATGTGAGGCAGAAAAGCAACATAATTTACACTCCACATTGCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGTTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTAGTCTCCAACGACAGTaGGTGAAGGGAACACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SRFKAVKSKQLLKSFAAISLQRQ*VKGTQV Trigger: CACTTGTGTTCCCTTCACTCACTGTCGTTGGAGACT...AATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAACCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR-3UTR TCA 90 bp | AATGAGATAAACCAATACGAGTCACAGAAGCCAAGTAAAGAGAAGGCAGGGGCTAGTCTCCAACGACAGTaGGTGAAGGGAACACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NEINQYESQKPSKEKAGASLQRQ*VKGTQV Trigger: CACTTGTGTTCCCTTCACTCACTGTCGTTGGAGACT...AGCCCCTGCCTTCTCTTTACTTGGCTTCTGTGACTCGTATTGGTTTATCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTAGTTTCAGTGACAGCTGGTAAGCATTGGAGTCACACAAGTCACACCAGAATACAACAGAGGTCCTaGAAAGCTGTCAGTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: ALVSVTAGKHWSHTSHTRIQQRS*KAVSLQ Trigger: TTGGAGACTGACAGCTTTGCAGGACCTCTGTTGTAT...TCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164467.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTAGTCTCCAACGACAGTaGGTGAAGGGAACACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: RPSSPSSYSNLLQPFTCVSLQRQ*VKGTQV Trigger: CACTTGTGTTCCCTTCACTCACTGTCGTTGGAGACT...AACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAATGTGGAAGTCCACACACTGCAGAATaGGGAAGAGCACTAGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RQRMQVLYFSIPKAECGSPHTAE*GRALVS Trigger: TGAAACTAGTGCTCTTCCTCATTCTGCAGTGTGTGG...ACTTCCACATTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | GATAACAGAAGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAAGCTGTCTCCACACACTaGAGAATGAGGAAGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: DNRRQRMQVLYFSIPKAEAVSTH*RMRKST Trigger: AGTGCTCTTCCTCATTCTGCAGTGTGTGGAGACAGC...TTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCTTCTGTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCACACCCATTCACATCTTCAACAAAGAAAGCTGTCTCCACACACTGCAGAATGTCCTTTGCATCAGTaGACTGTGAAACTAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: MHTHSHLQQRKLSPHTAECPLHQ*TVKLIQ Trigger: TTGGATTAGTTTCACAGTGCACTGATGCAAAGGACA...TTCTGCAGTGTGTGGAGACAGCTTTCTTTGTTGAAGATGTGAATGGGTGTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGCCAAGTAAAGAGAAGGCAGGGGCTGAGAAGATAACAGAAGACAGAGGAGTCATTTACTTATGTTaGTGTTACATGTCCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QKPSKEKAGAEKITEDRGVIYLC*CYMSFA Trigger: TGCAAAGGACATGTAACAGCAACATAAGTAAATGAC...TCCTCTGTCTTCTGTTATCTTCTCAGCCCCTGCCTTCTCTTTACTTGGCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | AGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAATGTGGAAGTGAATGCAATAGTCAGTaGACATGCACACCCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: RQRMQVLYFSIPKAECGSECNSQ*TCTPIH Trigger: GTGAATGGGTGTGCATGTGCACTGACTATTGCATTC...ACTTCCACATTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTTGGATTATGTGACTTGTAGTCTCCAACGACAGTaGGTGAAGGGAACACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: QLLKSFAAIYLCLDYVTCSLQRQ*VKGTQV Trigger: CACTTGTGTTCCCTTCACTCACTGTCGTTGGAGACT...ACAAGTCACATAATCCAAACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTGTCCTTTGCATCAGTaGACTGTGAAACTAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: KAVKSKQLLKSFAAIYLCCPLHQ*TVKLIQ Trigger: TTGGATTAGTTTCACAGTGCACTGATGCAAAGGACA...ACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR-3UTR GCA 90 bp | GATAACAGAAGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAAGAATGCAATAGTCAGTaGACATGCACACCCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: DNRRQRMQVLYFSIPKAEECNSQ*TCTPIH Trigger: GTGAATGGGTGTGCATGTGCACTGACTATTGCATTC...TTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCTTCTGTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CCA 90 bp | CCCGTAGAAATGCAAACATATTCCCACCAATCTATCCAAATGCTATTCCAACTATCTCTCAAGCACCAATaGAAGCCATGTAGTGATACG | + |
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Preference number: 2 (lower is better) Translates to: PVEMQTYSHQSIQMLFQLSLKHQ*KPCSDT Trigger: CGTATCACTACATGGCTTCCATTGGTGCTTGAGAGA...TAGTTGGAATAGCATTTGGATAGATTGGTGGGAATATGTTTGCATTTCTACGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTGGAACAGCAGGTTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTGTCATTTACTTATGTTaGTGTTACATGTCCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: KAGTAGLRPSSPSSYSNLVIYLC*CYMSFA Trigger: TGCAAAGGACATGTAACAGCAACATAAGTAAATGAC...AAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAACCTGCTGTTCCAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR CAA 90 bp | ATTCTAACTGTGGAAGTAACAAATAGAGGCCTTGTCATGACTGCCTaGAGTCATTTAAACAATCTTCAGACCAGCAGTACAAGATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ILTVEVTNRGLVMTA*SHLNNLQTSSTRFS Trigger: AGAGAATCTTGTACTGCTGGTCTGAAGATTGTTTAAATGACTCAAGGCAGTCATGACAAGGCCTCTATTTGTTACTTCCACAGTTAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGTAGAAATGCAAACATATTCCCACCAATCTATCCAAATGCTATTCCAACTATGTCCTTTGCATCAGTaGACTGTGAAACTAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: PVEMQTYSHQSIQMLFQLCPLHQ*TVKLIQ Trigger: TTGGATTAGTTTCACAGTGCACTGATGCAAAGGACA...TAGTTGGAATAGCATTTGGATAGATTGGTGGGAATATGTTTGCATTTCTACGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATTTACTCTAACATTGAAATTAGCCATTCCTCAGACACAGCTTTAACACAGTGTGTTTGGATTATGTaGCTTGTCTTCCAACTCGTG | + |
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Preference number: 2 (lower is better) Translates to: SIYSNIEISHSSDTALTQCVWIM*LVFQLV Trigger: CACGAGTTGGAAGACAAGTCACATAATCCAAACACA...CTGTGTTAAAGCTGTGTCTGAGGAATGGCTAATTTCAATGTTAGAGTAAATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | TCAATTTACTCTAACATTGAAATTAGCCATTCCTCAGACACAGCTTTAACACAGCCACAGGAAAGCAGGTaGACAAATGTAGTCATGATA | + |
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Preference number: 2 (lower is better) Translates to: SIYSNIEISHSSDTALTQPQESR*TNVVMI Trigger: TATCATGACTACATTTGTGCACCTGCTTTCCTGTGG...CTGTGTTAAAGCTGTGTCTGAGGAATGGCTAATTTCAATGTTAGAGTAAATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATTTACTCTAACATTGAAATTAGCCATTCCTCAGACACAGCTTTAACACAGATCTTCACTATATCATaGCCAAAGAGCCTGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SIYSNIEISHSSDTALTQIFTIS*PKSLQK Trigger: CTTTTGCAGGCTCTTTGGTCATGATATAGTGAAGAT...CTGTGTTAAAGCTGTGTCTGAGGAATGGCTAATTTCAATGTTAGAGTAAATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGTAGAAATGCAAACATATTCCCACCAATCTATCCAAATGCTATTCCAACTAACAGAAGACAGAGGATaGAAGTGTTATACTTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: PVEMQTYSHQSIQMLFQLTEDRG*KCYTLV Trigger: TACTAAAGTATAACACTTGCATCCTCTGTCTTCTGT...TAGTTGGAATAGCATTTGGATAGATTGGTGGGAATATGTTTGCATTTCTACGGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR GCA 90 bp | TCAATTTACTCTAACATTGAAATTAGCCATTCCTCAGACACAGCTTTAACACAGATTATGTTGCTTTTCTaGCTCACATTGAGTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: SIYSNIEISHSSDTALTQIMLLF*LTLSGT Trigger: TGTTCCACTCAATGTGAGGCAGAAAAGCAACATAAT...CTGTGTTAAAGCTGTGTCTGAGGAATGGCTAATTTCAATGTTAGAGTAAATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | GCACTAGTTTCAGTGACAGCTGGTAAGCATTGGAGTCACACAAGTCACACCAGACTTGCTTGCTACTTGTaGGAGCCAGCCCTACACCAG | + |
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Preference number: 3 (lower is better) Translates to: ALVSVTAGKHWSHTSHTRLACYL*EPALHQ Trigger: CTGGTGTAGGGCTGGCTCCAACAAGTAGCAAGCAAG...TCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCACACCCATTCACATCTTCAACAAAGAAAGCTGTCTCCACACACTGCAGAACTTGCTTGCTACTTGTaGGAGCCAGCCCTACACCAG | + |
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Preference number: 3 (lower is better) Translates to: MHTHSHLQQRKLSPHTAELACYL*EPALHQ Trigger: CTGGTGTAGGGCTGGCTCCAACAAGTAGCAAGCAAG...TTCTGCAGTGTGTGGAGACAGCTTTCTTTGTTGAAGATGTGAATGGGTGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGCCAAGTAAAGAGAAGGCAGGGGCTGAGAAGATAACAGAAGACAGAGGAGCTGTTACATGTCCTTaGCATCAGTGCACTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: QKPSKEKAGAEKITEDRGAVTCP*HQCTVK Trigger: TTTCACAGTGCACTGATGCAAAGGACATGTAACAGC...TCCTCTGTCTTCTGTTATCTTCTCAGCCCCTGCCTTCTCTTTACTTGGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACTTGCTTGCTTGCTACTTGTaGGAGCCAGCCCTACACCAG | + |
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Preference number: 3 (lower is better) Translates to: FKAVKSKQLLKSFAAIYLLACYL*EPALHQ Trigger: CTGGTGTAGGGCTGGCTCCAACAAGTAGCAAGCAAG...CAAGTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR TCA 72 bp | GAAGAGCATGGTCACTCTTACCTCAGGTTCATCTACTaGACTCAATGGGGATGGGCTTGCAAATATCCACAG | + |
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Preference number: 3 (lower is better) Translates to: EEHGHSYLRFIY*TQWGWACKYPQ Trigger: CTGTGGATATTTGCAAGCCCATCCCCATTGAGTTCAGTAGATGAACCTGAGGTAAGAGTGACCATGCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR CCA 72 bp | GGAAGAGCACTAGTTTCAGTGACAGCTGGTAAGCATTaGAGTCACACAAGTCACACCAGAACGGGCAAATAT | + |
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Preference number: 3 (lower is better) Translates to: GRALVSVTAGKH*SHTSHTRTGKY Trigger: ATATTTGCCCGTTCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAGTGCTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGCAGGTTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCAGCTGTTACATGTCCTTaGCATCAGTGCACTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: TAGLRPSSPSSYSNLLQPAVTCP*HQCTVK Trigger: TTTCACAGTGCACTGATGCAAAGGACATGTAACAGC...TGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAACCTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR-3UTR CAA 90 bp | GATAACAGAAGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAACTTGCTTGCTACTTGTaGGAGCCAGCCCTACACCAG | + |
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Preference number: 3 (lower is better) Translates to: DNRRQRMQVLYFSIPKAELACYL*EPALHQ Trigger: CTGGTGTAGGGCTGGCTCCAACAAGTAGCAAGCAAG...TTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCTTCTGTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTGGAACAGCAGGTTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTGCTGTTACATGTCCTTaGCATCAGTGCACTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KAGTAGLRPSSPSSYSNLAVTCP*HQCTVK Trigger: TTTCACAGTGCACTGATGCAAAGGACATGTAACAGC...AAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAACCTGCTGTTCCAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR GCA 72 bp | TTCACATCTTCAACAAAGAAAGCTGTCTCCACACACTaGAGAATGAGGAAGAGCACTAGTTTCAGTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: FTSSTKKAVSTH*RMRKSTSFSDS Trigger: GCTGTCACTGAAACTAGTGCTCTTCCTCATTCTGCAGTGTGTGGAGACAGCTTTCTTTGTTGAAGATGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTGCTGTTACATGTCCTTaGCATCAGTGCACTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KAVKSKQLLKSFAAIYLCAVTCP*HQCTVK Trigger: TTTCACAGTGCACTGATGCAAAGGACATGTAACAGC...ACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR-3UTR CAA 90 bp | TCAATTTACTCTAACATTGAAATTAGCCATTCCTCAGACACAGCTTTAACACAGCTTGCTTGCTACTTGTaGGAGCCAGCCCTACACCAG | + |
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Preference number: 3 (lower is better) Translates to: SIYSNIEISHSSDTALTQLACYL*EPALHQ Trigger: CTGGTGTAGGGCTGGCTCCAACAAGTAGCAAGCAAG...CTGTGTTAAAGCTGTGTCTGAGGAATGGCTAATTTCAATGTTAGAGTAAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR GCA 72 bp | GGATCAATCACTAGTGTGGAACCACAGGAAAGCAGGTaGACAAATGTAGTCATGATACAAATGATGCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GSITSVEPQESR*TNVVMIQMMPV Trigger: TACAGGCATCATTTGTATCATGACTACATTTGTGCACCTGCTTTCCTGTGGTTCCACACTAGTGATTGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR GCA 72 bp | AAGTTGGAGAAAGAGTCTTGGGTTGCTGGCAGTTCATaGCAAATGAGATCAAGACGGTGCTTTAGAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: KLEKESWVAGSS*QMRSRRCFRKC Trigger: ACATTTTCTAAAGCACCGTCTTGATCTCATTTGGCATGAACTGCCAGCAACCCAAGACTCTTTCTCCAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR GCA 72 bp | ACAGGCAGTGTCCTATTGCATATCAAATGGTGGAGATaGATTGATAGATTTGAGGGCACGATACTAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGSVLLHIKWWR*IDRFEGTILKE Trigger: CTCCTTTAGTATCGTGCCCTCAAATCTATCAATGCATCTCCACCATTTGATATGCAATAGGACACTGCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| 3UTR CCA 72 bp | TCTAAAAGTAGCAGTGACAAGTTGGAGAAAGAGTCTTaGGTTGCTGGCAGTTCATGCCAAATGAGATCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKSSSDKLEKES*VAGSSCQMRSR Trigger: TCTTGATCTCATTTGGCATGAACTGCCAGCAACCCAAGACTCTTTCTCCAACTTGTCACTGCTACTTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR-3UTR CAA 90 bp | AATGAGATAAACCAATACGAGTCACAGAAGCCAAGTAAAGAGAAGGCAGGGGCTCGTCATTTACTTATGTaGCTGTTACATGTCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NEINQYESQKPSKEKAGARHLLM*LLHVLC Trigger: GCAAAGGACATGTAACAGCAACATAAGTAAATGACG...AGCCCCTGCCTTCTCTTTACTTGGCTTCTGTGACTCGTATTGGTTTATCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| 3UTR TCA 72 bp | ATTTATGCGTGTCACCACCACCAGTCATTTATAGGATaGAACTCAAGGTCTATCTCCTTTGAAGGTTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: IYACHHHQSFIG*NSRSISFEGWN Trigger: GTTCCAACCTTCAAAGGAGATAGACCTTGAGTTTCATCCTATAAATGACTGGTGGTGGTGACACGCATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| 3UTR TCA 72 bp | TACAAATCCTTACAGGTCTTTCCTCGTGGAAAATCCTaGGATTTTAAGCACTGCTACTTTATAGAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YKSLQVFPRGKS*DFKHCYFIEGR Trigger: CCTGCCTTCTATAAAGTAGCAGTGCTTAAAATCTCAGGATTTTCCACGAGGAAAGACCTGTAAGGATTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| 3UTR TCA 72 bp | GTCATTTATAGGATGAAACTCAAGGTCTATCTCCTTTaGAGGTTGGAACTAGTAAGAGTTCACTTAGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: VIYRMKLKVYLL*RLELVRVHLAI Trigger: TATAGCTAAGTGAACTCTTACTAGTTCCAACCTTCAAAGGAGATAGACCTTGAGTTTCATCCTATAAATGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR GCA 90 bp | GCACTAGTTTCAGTGACAGCTGGTAAGCATTGGAGTCACACAAGTCACACCAGACTCCTCCGCAGACGCTaGCTCGGGGACTTCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALVSVTAGKHWSHTSHTRLLRRR*LGDFRG Trigger: TCCGCGGAAGTCCCCGAGGCAGCGTCTGCGGAGGAG...TCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCAAGTAAAGAGAAGGCAGGGGCTGAGAAGATAACAGAAGACAGAGGACTCCTCCGCAGACGCTaGCTCGGGGACTTCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKPSKEKAGAEKITEDRGLLRRR*LGDFRG Trigger: TCCGCGGAAGTCCCCGAGGCAGCGTCTGCGGAGGAG...TCCTCTGTCTTCTGTTATCTTCTCAGCCCCTGCCTTCTCTTTACTTGGCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR TCA 90 bp | GCACTAGTTTCAGTGACAGCTGGTAAGCATTGGAGTCACACAAGTCACACCAGAAGGGACGGTTTCCGCTaGGGGAGGTCCTGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVSVTAGKHWSHTSHTRRDGFR*GRSCGV Trigger: CACTCCACAGGACCTCCCTCAGCGGAAACCGTCCCT...TCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTTTCAGTGACAGCTGGTAAGCATTGGAGTCACACAAGTCACACCAGAACGAGGGACGGTTTCCGCTaGGGGAGGTCCTGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSVTAGKHWSHTSHTRTRDGFR*GRSCGV Trigger: CACTCCACAGGACCTCCCTCAGCGGAAACCGTCCCT...CGTTCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTCACATCTTCAACAAAGAAAGCTGTCTCCACACACTGCAGAATGAGGAACTCCTCCGCAGACGCTaGCTCGGGGACTTCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PIHIFNKESCLHTLQNEELLRRR*LGDFRG Trigger: TCCGCGGAAGTCCCCGAGGCAGCGTCTGCGGAGGAG...TTCCTCATTCTGCAGTGTGTGGAGACAGCTTTCTTTGTTGAAGATGTGAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACCTCCTCCGCAGACGCTaGCTCGGGGACTTCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RFKAVKSKQLLKSFAAIYLLRRR*LGDFRG Trigger: TCCGCGGAAGTCCCCGAGGCAGCGTCTGCGGAGGAG...GTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGATAAACCAATACGAGTCACAGAAGCCAAGTAAAGAGAAGGCAGGGGCTAGGGACGGTTTCCGCTaGGGGAGGTCCTGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NEINQYESQKPSKEKAGARDGFR*GRSCGV Trigger: CACTCCACAGGACCTCCCTCAGCGGAAACCGTCCCT...AGCCCCTGCCTTCTCTTTACTTGGCTTCTGTGACTCGTATTGGTTTATCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| CDS-3UTR TCA 90 bp | AGGGAACACAAGTGGGTAAGTAACGTAGTCAGAGAAATAAAGGACAGTAGAGGAAGGGACGGTTTCCGCTaGGGGAGGTCCTGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: REHKWVSNVVREIKDSRGRDGFR*GRSCGV Trigger: CACTCCACAGGACCTCCCTCAGCGGAAACCGTCCCT...TCCTCTACTGTCCTTTATTTCTCTGACTACGTTACTTACCCACTTGTGTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000168301.2 ENSMUST00000169492.8 ENSMUST00000170310.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTCAGTGACAGCTGGTAAGCATTGGAGTCACACAAGTCACACCAGAACGTCTTCCATTTCCTTTTaGTCCTCCGCAGACGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSVTAGKHWSHTSHTRTSSISF*SSADAA Trigger: GGCAGCGTCTGCGGAGGAGCAAAAGGAAATGGAAGA...CGTTCTGGTGTGACTTGTGTGACTCCAATGCTTACCAGCTGTCACTGAAACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCAAGTAAAGAGAAGGCAGGGGCTGAGAAGATAACAGAAGACAGAGGATGTCTTATCCGGGGCTaGAGCAGGAAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKPSKEKAGAEKITEDRGCLIRG*SRKLLV Trigger: AACAAGCAGCTTCCTGCTGCAGCCCCGGATAAGACA...TCCTCTGTCTTCTGTTATCTTCTCAGCCCCTGCCTTCTCTTTACTTGGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGGTTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATGTCTTATCCGGGGCTaGAGCAGGAAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TAGLRPSSPSSYSNLLQPCLIRG*SRKLLV Trigger: AACAAGCAGCTTCCTGCTGCAGCCCCGGATAAGACA...TGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAACCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
||
| 3UTR CAA 72 bp | TTACAGTGGGCTTCAGGGGTGGACATGGTGAGGGAATaGGGTCACGATAAAAGTAATGAGTCTGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQWASGVDMVRE*GHDKSNESEGW Trigger: CCAACCTTCAGACTCATTACTTTTATCGTGACCCAATTCCCTCACCATGTCCACCCCTGAAGCCCACTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR TCA 90 bp | GTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTTGGATTATGTGACTTGTCTAGGGACGGTTTCCGCTaGGGGAGGTCCTGTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTQIFCSHLLVFGLCDLSRDGFR*GRSCGV Trigger: CACTCCACAGGACCTCCCTCAGCGGAAACCGTCCCT...AGACAAGTCACATAATCCAAACACAAGTAAATGGCTGCAAAAGATTTGAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| CDS-3UTR GCA 90 bp | AGGGAACACAAGTGGGTAAGTAACGTAGTCAGAGAAATAAAGGACAGTAGAGGATGTCTTATCCGGGGCTaGAGCAGGAAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: REHKWVSNVVREIKDSRGCLIRG*SRKLLV Trigger: AACAAGCAGCTTCCTGCTGCAGCCCCGGATAAGACA...TCCTCTACTGTCCTTTATTTCTCTGACTACGTTACTTACCCACTTGTGTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000168301.2 ENSMUST00000169492.8 ENSMUST00000170310.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAGGCCGTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTCTTATCCGGGGCTaGAGCAGGAAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKAVKSKQLLKSFAAIYLCLIRG*SRKLLV Trigger: AACAAGCAGCTTCCTGCTGCAGCCCCGGATAAGACA...CAAGTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGACGGCCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| CDS-3UTR GCA 90 bp | GATAACAGAAGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAATGTCTTATCCGGGGCTaGAGCAGGAAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNRRQRMQVLYFSIPKAECLIRG*SRKLLV Trigger: AACAAGCAGCTTCCTGCTGCAGCCCCGGATAAGACA...TTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCTTCTGTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
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| CDS-3UTR GCA 90 bp | CAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTTGGATTATGTGACTTGTTGTCTTATCCGGGGCTaGAGCAGGAAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLLKSFAAIYLCLDYVTCCLIRG*SRKLLV Trigger: AACAAGCAGCTTCCTGCTGCAGCCCCGGATAAGACA...ACAAGTCACATAATCCAAACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
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| 3UTR CAA 72 bp | GTGGAAGTAACAAATAGAGGCCTTGTCATGACTGCCTaGAGTCATTTAAACAATCTTCAGACCAGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VEVTNRGLVMTA*SHLNNLQTSST Trigger: TGTACTGCTGGTCTGAAGATTGTTTAAATGACTCAAGGCAGTCATGACAAGGCCTCTATTTGTTACTTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| 3UTR CAA 72 bp | ATTTATGTTGGCCCTCTGCGTACAGGCAGTGTCCTATaGCATATCAAATGGTGGAGATGCATTGATAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IYVGPLRTGSVL*HIKWWRCIDRF Trigger: AAATCTATCAATGCATCTCCACCATTTGATATGCAATAGGACACTGCCTGTACGCAGAGGGCCAACATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007800.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| 3UTR CAA 72 bp | CAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTaGGATTATGTGACTTGTCTTCCAACTCGTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLLKSFAAIYLC*DYVTCLPTRGL Trigger: AAGACCACGAGTTGGAAGACAAGTCACATAATCCAAACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 ENSMUST00000170310.2 |
||
| CDS-3UTR CAA 90 bp | CCCATTCACATCTTCAACAAAGAAAGCTGTCTCCACACACTGCAGAATGAGGAAATCTTCCATTTCCTTTaGCTCCTCCGCAGACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PIHIFNKESCLHTLQNEEIFHFL*LLRRRC Trigger: GCAGCGTCTGCGGAGGAGCAAAAGGAAATGGAAGAT...TTCCTCATTCTGCAGTGTGTGGAGACAGCTTTCTTTGTTGAAGATGTGAATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAACACAAGTGGGTAAGTAACGTAGTCAGAGAAATAAAGGACAGTAGAGGAATCTTCCATTTCCTTTaGCTCCTCCGCAGACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: REHKWVSNVVREIKDSRGIFHFL*LLRRRC Trigger: GCAGCGTCTGCGGAGGAGCAAAAGGAAATGGAAGAT...TCCTCTACTGTCCTTTATTTCTCTGACTACGTTACTTACCCACTTGTGTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGTCCAAGCAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTTGGATATCTTCCATTTCCTTTaGCTCCTCCGCAGACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKSKQLLKSFAAIYLCLDIFHFL*LLRRRC Trigger: GCAGCGTCTGCGGAGGAGCAAAAGGAAATGGAAGAT...ATCCAAACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTGCTTGGACTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTACTCAAATCTTTTGCAGCCATTTACTTGTGTTTGGATTATGTGACTTGTATCTTCCATTTCCTTTaGCTCCTCCGCAGACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLKSFAAIYLCLDYVTCIFHFL*LLRRRC Trigger: GCAGCGTCTGCGGAGGAGCAAAAGGAAATGGAAGAT...ACAAGTCACATAATCCAAACACAAGTAAATGGCTGCAAAAGATTTGAGTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000164467.8 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS-3UTR CAA 90 bp | AGACAGAGGATGCAAGTGTTATACTTTAGTATCCCCAAAGCTGAATGTGGAAGTCCAAGTGAGGATACCTaGCCTTTAACTTTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQRMQVLYFSIPKAECGSPSEDT*PLTLLL Trigger: AAGAAGCAAAGTTAAAGGCAAGGTATCCTCACTTGG...ACTTCCACATTCAGCTTTGGGGATACTAAAGTATAACACTTGCATCCTCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007800.8 ENSMUST00000166549.2 ENSMUST00000168166.8 ENSMUST00000169492.8 |
||
| CDS GCA 72 bp | CCGCAGACGCTGCCTCGGGGACTTCCGCGGACATGGTaGTCCTTCTATCCCCGCGCCTCCGGCCCTGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: PQTLPRGLPRTW*SFYPRASGPAT Trigger: CGTCGCAGGGCCGGAGGCGCGGGGATAGAAGGAGCACCATGTCCGCGGAAGTCCCCGAGGCAGCGTCTGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169492.8 |
||
| CDS GCA 72 bp | GACATGGTGCTCCTTCTATCCCCGCGCCTCCGGCCCTaGGACGCCCGAGCACTTCCTCTTTCCCTCAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DMVLLLSPRLRP*DARALPLSLKG Trigger: ACCTTTGAGGGAAAGAGGAAGTGCTCGGGCGTCGCAGGGCCGGAGGCGCGGGGATAGAAGGAGCACCATGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169492.8 |
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