Pregenerated sensors for ARPIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039043Ensembl transcript IDs: ENSMUST00000048731.6
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGAAAGCAAACAGAGCGAGCCAGTTTGCAGCACACCACGCTCTCTaGTCCTGCCTCCAGGTTCCTGCCCTGCTTGAGCTCCTGCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: KKANRASQFAAHHAL*SCLQVPALLELLLS Trigger: TGAGAGCAGGAGCTCAAGCAGGGCAGGAACCTGGAGGCAGGAGCAGAGAGCGTGGTGTGCTGCAAACTGGCTCGCTCTGTTTGCTTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 90 bp | GTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATaGGTACACCTGCCATGGTCACACTCAAGACGTGTAGACTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: VIPVLPHPFSQDQAG*VHLPWSHSRRVDFR Trigger: ACGGAAGTCTACACGTCTTGAGTGTGACCATGGCAGGTGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 90 bp | GCTCCTGCCTCCAGGTTCCTGCCCTGCTTGAGCTCCTGCTCTCACTaGTTTACTGGTGATGAACTGTTCTACGGATCTGTGAGTGAAATA | + |
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Preference number: 1 (lower is better) Translates to: APASRFLPCLSSCSH*FTGDELFYGSVSEI Trigger: TATTTCACTCACAGATCCGTAGAACAGTTCATCACCAGTAAAGCAGTGAGAGCAGGAGCTCAAGCAGGGCAGGAACCTGGAGGCAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CCA 90 bp | GATATTCTGCTTGACAGCCTGATCTCTCCAAGGCAGAAGTTGGTGTaGCCACTTCTCAGCGACACCATCCCAGATGCTGGTCTAGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: DILLDSLISPRQKLV*PLLSDTIPDAGLVE Trigger: CTCAACTAGACCAGCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGAGATCAGGCTGTCAAGCAGAATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CCA 90 bp | GCCCACAGAGGCACAGAGCTGAATAGAAATAATGAAGTGGTATCTTaGGTGTGGGACAGGGAAGAACAGACAGAGGAAGACTGGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: AHRGTELNRNNEVVS*VWDREEQTEEDWDR Trigger: CCTGTCCCAGTCTTCCTCTGTCTGTTCTTCCCTGTCCCACACCCAAGATACCACTTCATTATTTCTATTCAGCTCTGTGCCTCTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR TCA 90 bp | CTAAGACAGAGATCTAAGGCAGGAAAGCCCACAGAGGCACAGAGCTaGATAGAAATAATGAAGTGGTATCTTGGGTGTGGGACAGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LRQRSKAGKPTEAQS*IEIMKWYLGCGTGK Trigger: CTTCCCTGTCCCACACCCAAGATACCACTTCATTATTTCTATTCAGCTCTGTGCCTCTGTGGGCTTTCCTGCCTTAGATCTCTGTCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 90 bp | GCCTTTGTCAATTGTGTACCTTGGAGGACTCATCTAGTCCATGCCTaGTACCTAGGGAAAGGAATACTGGAGATAGATCTAGGAAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: AFVNCVPWRTHLVHA*YLGKGILEIDLGKL Trigger: TAGCTTTCCTAGATCTATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAAGGTACACAATTGACAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CAA 90 bp | CTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTaGCAGCACACCACGCTCTCTGCTCCTGCCTCCAGGTTCCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LVVLGSRRKQTERAS*QHTTLSAPASRFLP Trigger: GGGCAGGAACCTGGAGGCAGGAGCAGAGAGCGTGGTGTGCTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGGGTTCCTGCCCTGCTTaGGCTCCTGCTCTCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: GLVVLGSRRKQTERASLQGSCPA*APALTA Trigger: AGCAGTGAGAGCAGGAGCTCAAGCAGGGCAGGAACC...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR GCA 90 bp | AGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATGCGTACACACGCTCTCTGCTCCTaGCTCCAGGTTCCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SNPCPPSPFFPGSGRMRTHALCS*LQVPAL Trigger: CAGGGCAGGAACCTGGAGGCAGGAGCAGAGAGCGTG...TGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGGACTCATCTAGTCCATaGCTGCTACCTAGGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLVVLGSRRKQTERASLQDSSSP*LLPRER Trigger: CCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTC...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATGCGTACACAGACAGAGGAAGACTaGGACAGGAGAACAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SNPCPPSPFFPGSGRMRTQTEED*DRRTEA Trigger: TGCCTCTGTTCTCCTGTCCCAGTCTTCCTCTGTCTG...TGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | GTCGGATCAGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGAGTGGTATCTTGGGTGTaGGACAGGGAAGAACAGACA | + |
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Preference number: 2 (lower is better) Translates to: VGSVIPVLPHPFSQDQAGVVSWV*DREEQT Trigger: TGTCTGTTCTTCCCTGTCCCACACCCAAGATACCAC...TCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACTGATCCGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGCTGAGGTCTTGGGTTTaGTTTCATCAGAGGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: GLVVLGSRRKQTERASLQLRSWV*FHQRVF Trigger: GAACACCCTCTGATGAAATCAAACCCAAGACCTCAG...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGACCCTTGGTGAGTACTaGGGTCTTGGGTTTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: GLVVLGSRRKQTERASLQTLGEY*GLGFDF Trigger: GAAATCAAACCCAAGACCTCAGTACTCACCAAGGGT...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | GTCGGATCAGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGAACAAAAGCCATAGCCTaGAGACCCTTGGTGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: VGSVIPVLPHPFSQDQAGTKAIA*RPLVST Trigger: AGTACTCACCAAGGGTCTCCAGGCTATGGCTTTTGT...TCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACTGATCCGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACCCAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGCACAGCTGGGAAGGCTaGAGGCCTTCCCAAAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: RTQSCGGILSRRVLTPKKHSWEG*RPSQKW Trigger: CCATTTTTGGGAAGGCCTTCAGCCTTCCCAGCTGTG...CTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTGGGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR GCA 90 bp | GTCGGATCAGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGACATCTAGTCCATGCCTaGTACCTAGGGAAAGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: VGSVIPVLPHPFSQDQAGHLVHA*YLGKGI Trigger: TATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATG...TCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACTGATCCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTTCTCCCTCCAAGGCAGAAGTTaGTGTGGCCACTTCTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: QSCGGILSRRVLTPKKFSLQGRS*CGHFSA Trigger: CGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAG...GGAGAACTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGACAGAGGCACAGAGCTaGATAGAAATAATGAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GLVVLGSRRKQTERASLQTEAQS*IEIMKW Trigger: CCACTTCATTATTTCTATTCAGCTCTGTGCCTCTGT...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | CTACCTAGGGAAAGGAATACTGGAGATAGATCTAGGAAAGCTAGCCTTGCATCCAGGCAGAAGTTGGTGTaGCCACTTCTCAGCGACACC | + |
|
Preference number: 2 (lower is better) Translates to: LPRERNTGDRSRKASLASRQKLV*PLLSDT Trigger: GGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCT...GGATGCAAGGCTAGCTTTCCTAGATCTATCTCCAGTATTCCTTTCCCTAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACCCAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTTCTGCTTGACAGCCTaGTCTCTCCAAGGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: RTQSCGGILSRRVLTPKKFCLTA*SLQGRS Trigger: ACTTCTGCCTTGGAGAGATCAGGCTGTCAAGCAGAA...CTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTGGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGATAGAAATAATGAAGTaGTATCTTGGGTGTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: GLVVLGSRRKQTERASLQIEIMK*YLGCGT Trigger: TGTCCCACACCCAAGATACCACTTCATTATTTCTAT...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR GCA 90 bp | TATTTATCCTATGTACATCATAGGGTTGTTGTGACAGACTACTCCAAGTACTTAGCACACCACGCTCTCTaGTCCTGCCTCCAGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: YLSYVHHRVVVTDYSKYLAHHAL*SCLQVP Trigger: AGGAACCTGGAGGCAGGAGCAGAGAGCGTGGTGTGC...TAAGTACTTGGAGTAGTCTGTCACAACAACCCTATGATGTACATAGGATAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGAAAAAGTTGGCCCAGTaGAATGAGTCAAGACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: RTQSCGGILSRRVLTPKKKKLAQ*NESRLV Trigger: CACAAGTCTTGACTCATTCCACTGGGCCAACTTTTT...CTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTGGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 72 bp | AACAGAGCGAGCCAGTTTGCAGCACACCACGCTCTCTaGTCCTGCCTCCAGGTTCCTGCCCTGCTTGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: NRASQFAAHHAL*SCLQVPALLEL Trigger: GAGCTCAAGCAGGGCAGGAACCTGGAGGCAGGAGCAGAGAGCGTGGTGTGCTGCAAACTGGCTCGCTCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 72 bp | TGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTaGAGCACACCACGCTCTCTGCTCCTGCCTCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: WVLEESKQSEPV*STPRSLLLPPG Trigger: ACCTGGAGGCAGGAGCAGAGAGCGTGGTGTGCTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 72 bp | GTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATaGGTACACCTGCCATGGTCACACTCAAGACGTGTA | + |
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Preference number: 3 (lower is better) Translates to: VLPHPFSQDQAG*VHLPWSHSRRV Trigger: TACACGTCTTGAGTGTGACCATGGCAGGTGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CCA 72 bp | CTTGACAGCCTGATCTCTCCAAGGCAGAAGTTGGTGTaGCCACTTCTCAGCGACACCATCCCAGATGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: LDSLISPRQKLV*PLLSDTIPDAG Trigger: ACCAGCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGAGATCAGGCTGTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CAA 90 bp | GTCGGATCAGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGAGAGAAAACTGCAGGATaGGAAAGAGCCGGCGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VGSVIPVLPHPFSQDQAGEKTAG*ERAGAL Trigger: AAGAGCGCCGGCTCTTTCCAATCCTGCAGTTTTCTC...TCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACTGATCCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CAA 90 bp | TTGGAGGACTCATCTAGTCCATGCCTGCTACCTAGGGAAAGGAATACTGGAGATTCTCCAAGGCAGAAGTaGGTGTGGCCACTTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LEDSSSPCLLPRERNTGDSPRQK*VWPLLS Trigger: GCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGA...ATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CCA 72 bp | TCCAATGAGGGCCACAGACATACAAAAGCCATAGCCTaGAGACCCTTGGTGAGTACTGAGGTCTTGGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: SNEGHRHTKAIA*RPLVSTEVLGL Trigger: CAAACCCAAGACCTCAGTACTCACCAAGGGTCTCCAGGCTATGGCTTTTGTATGTCTGTGGCCCTCATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CCA 72 bp | GGACTCAGACAAGGAGCCTTTGTCAATTGTGTACCTTaGAGGACTCATCTAGTCCATGCCTGCTACCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: GLRQGAFVNCVP*RTHLVHACYLG Trigger: CCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAAGGTACACAATTGACAAAGGCTCCTTGTCTGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CCA 72 bp | GTGAGTGAAATAAACCCTTCCCTCCCCAAGTTGCTTTaGGTCGTCGGGTTTCATTGGAGCAGTAAGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VSEINPSLPKLL*VVGFHWSSKSP Trigger: AGGGCTCTTACTGCTCCAATGAAACCCGACGACCCAAAGCAACTTGGGGAGGGAAGGGTTTATTTCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR TCA 72 bp | ATCAGAGGGTGTTCAATGATATTCTGCTTGACAGCCTaGTCTCTCCAAGGCAGAAGTTGGTGTGGCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: IRGCSMIFCLTA*SLQGRSWCGHF Trigger: GAAGTGGCCACACCAACTTCTGCCTTGGAGAGATCAGGCTGTCAAGCAGAATATCATTGAACACCCTCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR TCA 72 bp | AGATCTAAGGCAGGAAAGCCCACAGAGGCACAGAGCTaGATAGAAATAATGAAGTGGTATCTTGGGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RSKAGKPTEAQS*IEIMKWYLGCG Trigger: CCCACACCCAAGATACCACTTCATTATTTCTATTCAGCTCTGTGCCTCTGTGGGCTTTCCTGCCTTAGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR-3UTR CAA 90 bp | AGTCCATGCCTGCTACCTAGGGAAAGGAATACTGGAGATAGATCTAGGAAAGCTGTGAGTACTGAGGTCTaGGGTTTGATTTCATCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SPCLLPRERNTGDRSRKAVSTEV*GLISSE Trigger: CTCTGATGAAATCAAACCCAAGACCTCAGTACTCAC...AGCTTTCCTAGATCTATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 72 bp | TGTCAATTGTGTACCTTGGAGGACTCATCTAGTCCATaGCTGCTACCTAGGGAAAGGAATACTGGAGATAGA | + |
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Preference number: 3 (lower is better) Translates to: CQLCTLEDSSSP*LLPRERNTGDR Trigger: TCTATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAAGGTACACAATTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR GCA 72 bp | AATTGTGTACCTTGGAGGACTCATCTAGTCCATGCCTaGTACCTAGGGAAAGGAATACTGGAGATAGATCTA | + |
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Preference number: 3 (lower is better) Translates to: NCVPWRTHLVHA*YLGKGILEIDL Trigger: TAGATCTATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAAGGTACACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR GCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGGGCAGGCGCGCGCTCTaGACGGCCTTGTTGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLVVLGSRRKQTERASLQGRRAL*TALLRR Trigger: CCTCCGCAACAAGGCCGTGCAGAGCGCGCGCCTGCC...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | CTCTCCAAGGCAGAAGTTGGTGTGGCCACTTCTCAGCGACACCATCCCAGATGCTTCCCCCTTGGTGGGTaGCAGGGTCCCAGGTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSKAEVGVATSQRHHPRCFPLGG*QGPRFP Trigger: CGGGAACCTGGGACCCTGCCACCCACCAAGGGGGAA...GCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGCCATTTCCCCCTTGGTaGGTGGCAGGGTCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GLVVLGSRRKQTERASLQPFPPW*VAGSQV Trigger: AACCTGGGACCCTGCCACCCACCAAGGGGGAAATGG...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR GCA 90 bp | AGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATGCGTACACCCCCTCCAGCAAGATaGCATTTCCCCCTTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SNPCPPSPFFPGSGRMRTPPPAR*HFPLGG Trigger: CCCACCAAGGGGGAAATGGCATCTTGCTGGAGGGGG...TGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR GCA 90 bp | CTCTCCAAGGCAGAAGTTGGTGTGGCCACTTCTCAGCGACACCATCCCAGATGCAGTAGCGCTCCTTCCTaGCATGGGCATCCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: LSKAEVGVATSQRHHPRCSSAPS*HGHPRC Trigger: GCATCTTGGATGCCCATGGCAGGAAGGAGCGCTACT...GCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR GCA 90 bp | TCTCCAAGGCAGAAGTTGGTGTGGCCACTTCTCAGCGACACCATCCCAGATGCTGCATCCAAGATGCTGTaGCGAGATACATCCACGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPRQKLVWPLLSDTIPDAASKML*RDTSTS Trigger: GCTCGTGGATGTATCTCGGCACAGCATCTTGGATGC...AGCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGGTCAATTCCAGCAGCTaGGGCTTGTTTACCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVVLGSRRKQTERASLQVNSSS*GLFTRL Trigger: GAGCCTGGTAAACAAGCCCCAGCTGCTGGAATTGAC...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | CAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTTCTCCTGCCACCGCCTGGTCTaGGGTGAGGCTCTCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: QSCGGILSRRVLTPKKFSCHRLV*GEALCQ Trigger: TTGACAGAGAGCCTCACCCCAGACCAGGCGGTGGCA...GGAGAACTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | GTCGGATCAGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGAAAGACTTCTGGGCCATaGTATTGTCTGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGSVIPVLPHPFSQDQAGKTSGP*YCLSRK Trigger: CTTCCTGGACAGACAATATCATGGCCCAGAAGTCTT...TCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACTGATCCGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR GCA 90 bp | AGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATGCGTACACATGGGCATCCAAGATaGTGTGCCGAGATACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNPCPPSPFFPGSGRMRTHGHPR*CAEIHP Trigger: TGGATGTATCTCGGCACAGCATCTTGGATGCCCATG...TGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | AGAACCCAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGCGCTCCTTCCTGCCATaGGCATCCAAGATGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQSCGGILSRRVLTPKKRSFLP*ASKMLC Trigger: GCACAGCATCTTGGATGCCCATGGCAGGAAGGAGCG...CTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTGGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR GCA 90 bp | CTACCTAGGGAAAGGAATACTGGAGATAGATCTAGGAAAGCTAGCCTTGCATCCTCTGCCCCGTCTCCTTaGTCTCGGATCTCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRERNTGDRSRKASLASSAPSP*SRISAV Trigger: CACAGCAGAGATCCGAGAGCAAGGAGACGGGGCAGA...GGATGCAAGGCTAGCTTTCCTAGATCTATCTCCAGTATTCCTTTCCCTAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | TCTCCAAGGCAGAAGTTGGTGTGGCCACTTCTCAGCGACACCATCCCAGATGCTCTCTCTGAAGACTTCTaGGCCATGATATTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPRQKLVWPLLSDTIPDALSEDF*AMILSV Trigger: GACAGACAATATCATGGCCCAGAAGTCTTCAGAGAG...AGCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | CAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTTCTCCCATGACCTCCATCTCTaGCTCAGGCATCCAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QSCGGILSRRVLTPKKFSHDLHL*LRHPEC Trigger: GCATTCTGGATGCCTGAGTCAGAGATGGAGGTCATG...GGAGAACTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | CAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTTCTCCCCAGTTCGAGTTCCATaGCCTCCATCTCTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSCGGILSRRVLTPKKFSPVRVP*PPSLTQ Trigger: CTGAGTCAGAGATGGAGGTCATGGAACTCGAACTGG...GGAGAACTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | CAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTTCTCCTGGCTAAGGAATCTATaGAGGGACCATCACCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSCGGILSRRVLTPKKFSWLRNL*RDHHPE Trigger: CTCGGGGTGATGGTCCCTTCATAGATTCCTTAGCCA...GGAGAACTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGGTGGTCCTGGGTTCTAGAAGAAAGCAAACAGAGCGAGCCAGTTTGCAGCAATTTCATTTCCCTTaGGGTCAAACTTACGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVLGSRRKQTERASLQQFHFP*GQTYAC Trigger: ACAGGCGTAAGTTTGACCCCAAGGGAAATGAAATTG...CTGCAAACTGGCTCGCTCTGTTTGCTTTCTTCTAGAACCCAGGACCACCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CAA 72 bp | TGGACTCAGACAAGGAGCCTTTGTCAATTGTGTACCTaGGAGGACTCATCTAGTCCATGCCTGCTACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTQTRSLCQLCT*EDSSSPCLLPR Trigger: CCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAAGGTACACAATTGACAAAGGCTCCTTGTCTGAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CAA 72 bp | GGATCTGTGAGTGAAATAAACCCTTCCCTCCCCAAGTaGCTTTGGGTCGTCGGGTTTCATTGGAGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVSEINPSLPK*LWVVGFHWSSK Trigger: CTTACTGCTCCAATGAAACCCGACGACCCAAAGCAACTTGGGGAGGGAAGGGTTTATTTCACTCACAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | TTGGAGGACTCATCTAGTCCATGCCTGCTACCTAGGGAAAGGAATACTGGAGATCCTTCCTGGTGGCACTaGAGTTGGGCTCAATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEDSSSPCLLPRERNTGDPSWWH*SWAQFH Trigger: ATGAAATTGAGCCCAACTTCAGTGCCACCAGGAAGG...ATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CCA 90 bp | TATTTATCCTATGTACATCATAGGGTTGTTGTGACAGACTACTCCAAGTACTTACAGAATGCCACCGCCTaGTCTGGGGTGAGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLSYVHHRVVVTDYSKYLQNATA*SGVRLS Trigger: AGAGAGCCTCACCCCAGACCAGGCGGTGGCATTCTG...TAAGTACTTGGAGTAGTCTGTCACAACAACCCTATGATGTACATAGGATAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CAA 72 bp | GTCAGTACTGGTGACAGAAAGCATCTGTCATTGAGTTaGAACCATGAAGTCGGATCAGTAATCCCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTGDRKHLSLS*NHEVGSVIPVL Trigger: GAGGACAGGGATTACTGATCCGACTTCATGGTTCAAACTCAATGACAGATGCTTTCTGTCACCAGTACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | CTCAGTATTGTCAGTACTGGTGACAGAAAGCATCTGTCATTGAGTTTGAACCATTGCTGTGTTCCTCTCTaGAGACTTCTGGGCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSIVSTGDRKHLSLSLNHCCVPL*RLLGHD Trigger: ATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGCA...ATGGTTCAAACTCAATGACAGATGCTTTCTGTCACCAGTACTGACAATACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR TCA 90 bp | CTCAGTATTGTCAGTACTGGTGACAGAAAGCATCTGTCATTGAGTTTGAACCATCTCCACCTTGTAAGATaGCATGAGGAAGCCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSIVSTGDRKHLSLSLNHLHLVR*HEEACV Trigger: AACACAGGCTTCCTCATGTCATCTTACAAGGTGGAG...ATGGTTCAAACTCAATGACAGATGCTTTCTGTCACCAGTACTGACAATACTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| 3UTR CAA 72 bp | AGTATTGTCAGTACTGGTGACAGAAAGCATCTGTCATaGAGTTTGAACCATGAAGTCGGATCAGTAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIVSTGDRKHLS*SLNHEVGSVIP Trigger: AGGGATTACTGATCCGACTTCATGGTTCAAACTCAATGACAGATGCTTTCTGTCACCAGTACTGACAATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS CCA 90 bp | ACATCCACGAGCTCCCCCTCCAGCAAGATGCCATTTCCCCCTTGGTaGGTGGCAGGGTCCCAGGTTCCCGGCAGGCGCGCGCTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TSTSSPSSKMPFPPW*VAGSQVPGRRALCT Trigger: CGTGCAGAGCGCGCGCCTGCCGGGAACCTGGGACCCTGCCACCCACCAAGGGGGAAATGGCATCTTGCTGGAGGGGGAGCTCGTGGATGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS CCA 90 bp | GCCACCGCCTGGTCTGGGGTGAGGCTCTCTGTCAATTCCAGCAGCTaGGGCTTGTTTACCAGGCTCTTCAGCGCCTCCAGGGTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATAWSGVRLSVNSSS*GLFTRLFSASRVSR Trigger: CCGGCTCACCCTGGAGGCGCTGAAGAGCCTGGTAAACAAGCCCCAGCTGCTGGAATTGACAGAGAGCCTCACCCCAGACCAGGCGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS GCA 90 bp | AGATGCTGTGCCGAGATACATCCACGAGCTCCCCCTCCAGCAAGATaGCATTTCCCCCTTGGTGGGTGGCAGGGTCCCAGGTTCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RCCAEIHPRAPPPAR*HFPLGGWQGPRFPA Trigger: TGCCGGGAACCTGGGACCCTGCCACCCACCAAGGGGGAAATGGCATCTTGCTGGAGGGGGAGCTCGTGGATGTATCTCGGCACAGCATCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS TCA 90 bp | CCAGCAGCTGGGGCTTGTTTACCAGGCTCTTCAGCGCCTCCAGGGTaGGCCGGTCTGTGTCGCCCTTGGCCTCCACCTTGTAAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PAAGACLPGSSAPPG*AGLCRPWPPPCKMT Trigger: TGTCATCTTACAAGGTGGAGGCCAAGGGCGACACAGACCGGCTCACCCTGGAGGCGCTGAAGAGCCTGGTAAACAAGCCCCAGCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CAA 90 bp | CTCTCCAAGGCAGAAGTTGGTGTGGCCACTTCTCAGCGACACCATCCCAGATGCCTCTGCCCCGTCTCCTaGCTCTCGGATCTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSKAEVGVATSQRHHPRCLCPVS*LSDLCC Trigger: ACAGCAGAGATCCGAGAGCAAGGAGACGGGGCAGAG...GCATCTGGGATGGTGTCGCTGAGAAGTGGCCACACCAACTTCTGCCTTGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS TCA 90 bp | CAGGGTGAGCCGGTCTGTGTCGCCCTTGGCCTCCACCTTGTAAGATaGCATGAGGAAGCCTGTGTTCACCTTCCTGGTGGCACTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QGEPVCVALGLHLVR*HEEACVHLPGGTEV Trigger: AACTTCAGTGCCACCAGGAAGGTGAACACAGGCTTCCTCATGTCATCTTACAAGGTGGAGGCCAAGGGCGACACAGACCGGCTCACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS TCA 90 bp | CTCTGCCCCGTCTCCTTGCTCTCGGATCTCTGCTGTGTTCCTCTCTaGAGACTTCTGGGCCATGATATTGTCTGTCCAGGAAGCTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LCPVSLLSDLCCVPL*RLLGHDIVCPGSSR Trigger: ACGGGAGCTTCCTGGACAGACAATATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGCAGAGATCCGAGAGCAAGGAGACGGGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS GCA 90 bp | TATACAGCACATAGTAGCGCTCCTTCCTGCCATGGGCATCCAAGATaGTGTGCCGAGATACATCCACGAGCTCCCCCTCCAGCAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: YTAHSSAPSCHGHPR*CAEIHPRAPPPARC Trigger: GCATCTTGCTGGAGGGGGAGCTCGTGGATGTATCTCGGCACAGCATCTTGGATGCCCATGGCAGGAAGGAGCGCTACTATGTGCTGTATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CAA 90 bp | AGTAATCCCTGTCCTCCCTCACCCTTTTTCCCAGGATCAGGCAGGATGCGTACATTCTGGGCCATGATATaGTCTGTCCAGGAAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNPCPPSPFFPGSGRMRTFWAMI*SVQEAP Trigger: GGGAGCTTCCTGGACAGACAATATCATGGCCCAGAA...TGTACGCATCCTGCCTGATCCTGGGAAAAAGGGTGAGGGAGGACAGGGATTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS TCA 90 bp | GCTCTCGGATCTCTGCTGTGTTCCTCTCTGAAGACTTCTGGGCCATaGTATTGTCTGTCCAGGAAGCTCCCGTCTTTCCATCACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALGSLLCSSLKTSGP*YCLSRKLPSFHHQQ Trigger: TTGCTGGTGATGGAAAGACGGGAGCTTCCTGGACAGACAATATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGCAGAGATCCGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS CCA 90 bp | CAATTTCATTTCCCTTGGGGTCAAACTTACGCCTGTGGATACAGCTaGGCTGGATATACAGCACATAGTAGCGCTCCTTCCTGCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QFHFPWGQTYACGYS*AGYTAHSSAPSCHG Trigger: CCCATGGCAGGAAGGAGCGCTACTATGTGCTGTATATCCAGCCCAGCTGTATCCACAGGCGTAAGTTTGACCCCAAGGGAAATGAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS CCA 90 bp | TCTCCTTGCTCTCGGATCTCTGCTGTGTTCCTCTCTGAAGACTTCTaGGCCATGATATTGTCTGTCCAGGAAGCTCCCGTCTTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SPCSRISAVFLSEDF*AMILSVQEAPVFPS Trigger: TGATGGAAAGACGGGAGCTTCCTGGACAGACAATATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGCAGAGATCCGAGAGCAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CAA 90 bp | TTGGAGGACTCATCTAGTCCATGCCTGCTACCTAGGGAAAGGAATACTGGAGATCTGGTGGCACTGAAGTaGGGCTCAATTTCATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LEDSSSPCLLPRERNTGDLVALK*GSISFP Trigger: GGGAAATGAAATTGAGCCCAACTTCAGTGCCACCAG...ATCTCCAGTATTCCTTTCCCTAGGTAGCAGGCATGGACTAGATGAGTCCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS-3UTR CAA 90 bp | AGAACCCAGTCGTGTGGAGGAATTCTTTCCCGAAGAGTACTCACTCCTAAGAAGTCAATTTCATTTCCCTaGGGGTCAAACTTACGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTQSCGGILSRRVLTPKKSISFP*GSNLRL Trigger: CAGGCGTAAGTTTGACCCCAAGGGAAATGAAATTGA...CTTCTTAGGAGTGAGTACTCTTCGGGAAAGAATTCCTCCACACGACTGGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS CCA 72 bp | ACGAGCTCCCCCTCCAGCAAGATGCCATTTCCCCCTTaGTGGGTGGCAGGGTCCCAGGTTCCCGGCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSPSSKMPFPP*WVAGSQVPGRR Trigger: GCGCCTGCCGGGAACCTGGGACCCTGCCACCCACCAAGGGGGAAATGGCATCTTGCTGGAGGGGGAGCTCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS TCA 72 bp | GGGGCTTGTTTACCAGGCTCTTCAGCGCCTCCAGGGTaGGCCGGTCTGTGTCGCCCTTGGCCTCCACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GACLPGSSAPPG*AGLCRPWPPPC Trigger: ACAAGGTGGAGGCCAAGGGCGACACAGACCGGCTCACCCTGGAGGCGCTGAAGAGCCTGGTAAACAAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS CAA 90 bp | GCCTGGTCTGGGGTGAGGCTCTCTGTCAATTCCAGCAGCTGGGGCTaGTTTACCAGGCTCTTCAGCGCCTCCAGGGTGAGCCGGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AWSGVRLSVNSSSWG*FTRLFSASRVSRSV Trigger: CACAGACCGGCTCACCCTGGAGGCGCTGAAGAGCCTGGTAAACAAGCCCCAGCTGCTGGAATTGACAGAGAGCCTCACCCCAGACCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS TCA 72 bp | CCGGTCTGTGTCGCCCTTGGCCTCCACCTTGTAAGATaGCATGAGGAAGCCTGTGTTCACCTTCCTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVCVALGLHLVR*HEEACVHLPGG Trigger: GCCACCAGGAAGGTGAACACAGGCTTCCTCATGTCATCTTACAAGGTGGAGGCCAAGGGCGACACAGACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS TCA 72 bp | TCCAGTCCCCAGTTCGAGTTCCATGACCTCCATCTCTaGCTCAGGCATCCAGAATGCCACCGCCTGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPQFEFHDLHL*LRHPECHRLVW Trigger: CCAGACCAGGCGGTGGCATTCTGGATGCCTGAGTCAGAGATGGAGGTCATGGAACTCGAACTGGGGACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS GCA 72 bp | CATAGTAGCGCTCCTTCCTGCCATGGGCATCCAAGATaGTGTGCCGAGATACATCCACGAGCTCCCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HSSAPSCHGHPR*CAEIHPRAPPP Trigger: TGGAGGGGGAGCTCGTGGATGTATCTCGGCACAGCATCTTGGATGCCCATGGCAGGAAGGAGCGCTACTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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| CDS CAA 90 bp | GATGACATGAGGAAGCCTGTGTTCACCTTCCTGGTGGCACTGAAGTaGGGCTCAATTTCATTTCCCTTGGGGTCAAACTTACGCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DDMRKPVFTFLVALK*GSISFPLGSNLRLW Trigger: CCACAGGCGTAAGTTTGACCCCAAGGGAAATGAAATTGAGCCCAACTTCAGTGCCACCAGGAAGGTGAACACAGGCTTCCTCATGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS TCA 72 bp | GTCTCCTTGCTCTCGGATCTCTGCTGTGTTCCTCTCTaGAGACTTCTGGGCCATGATATTGTCTGTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VSLLSDLCCVPL*RLLGHDIVCPG Trigger: TCCTGGACAGACAATATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGCAGAGATCCGAGAGCAAGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS CAA 72 bp | GCTGTGTTCCTCTCTGAAGACTTCTGGGCCATGATATaGTCTGTCCAGGAAGCTCCCGTCTTTCCATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AVFLSEDFWAMI*SVQEAPVFPSP Trigger: TGGTGATGGAAAGACGGGAGCTTCCTGGACAGACAATATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS CAA 90 bp | TCTGTCCAGGAAGCTCCCGTCTTTCCATCACCAGCAAAATTACACTaGGTCACTGTCCCCAGCTCCAGTTTGGCTAAGGAATCTATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVQEAPVFPSPAKLH*VTVPSSSLAKESMK Trigger: CTTCATAGATTCCTTAGCCAAACTGGAGCTGGGGACAGTGACCAAGTGTAATTTTGCTGGTGATGGAAAGACGGGAGCTTCCTGGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS CAA 90 bp | CGGATCTCTGCTGTGTTCCTCTCTGAAGACTTCTGGGCCATGATATaGTCTGTCCAGGAAGCTCCCGTCTTTCCATCACCAGCAAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: RISAVFLSEDFWAMI*SVQEAPVFPSPAKL Trigger: TAATTTTGCTGGTGATGGAAAGACGGGAGCTTCCTGGACAGACAATATCATGGCCCAGAAGTCTTCAGAGAGGAACACAGCAGAGATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
||
| CDS CCA 72 bp | AAGCTCCCGTCTTTCCATCACCAGCAAAATTACACTTaGTCACTGTCCCCAGCTCCAGTTTGGCTAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KLPSFHHQQNYT*SLSPAPVWLRN Trigger: ATTCCTTAGCCAAACTGGAGCTGGGGACAGTGACCAAGTGTAATTTTGCTGGTGATGGAAAGACGGGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048731.6 |
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