Pregenerated sensors for ARPC5L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026755Ensembl transcript IDs: ENSMUST00000090993.8, ENSMUST00000112862.7
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGCTGTGTCGTCGCCCTGCTTGCTTTCCCCCTCCCCCAGGGATaGCAGGACAGGGACACCTGTACTCCTTCTACATCAGCTTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: HSCVVALLAFPLPQG*QDRDTCTPSTSAFQ Trigger: TTGGAAAGCTGATGTAGAAGGAGTACAGGTGTCCCTGTCCTGCCATCCCTGGGGGAGGGGGAAAGCAAGCAGGGCGACGACACAGCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR CCA 90 bp | GGTACACCTGACATAATCTGGCCAGTCAGCCTGATAGTCAAGTGTTaGTTCTGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCT | + |
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Preference number: 1 (lower is better) Translates to: GTPDIIWPVSLIVKC*FCVNSVDKGRHSDP Trigger: AGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGACTATCAGGCTGACTGGCCAGATTATGTCAGGTGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| 3UTR GCA 90 bp | TTCATTAGCAAATCAATGCCATTTCTGTCCAGTGACTGCACAGCCTaGTCAATTTCGCTGCTCTTAAAGTTTGTGAGTACTTTCAGGACT | + |
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Preference number: 1 (lower is better) Translates to: FISKSMPFLSSDCTA*SISLLLKFVSTFRT Trigger: AGTCCTGAAAGTACTCACAAACTTTAAGAGCAGCGAAATTGAGCAGGCTGTGCAGTCACTGGACAGAAATGGCATTGATTTGCTAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090993.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGAAAAATAAACACTCAGCAAAAGGTCTCTCGGTAGCATCCAGCACCTCTCTGTGGATCTGCACCTaGCCAAACAGTCCCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SKKNKHSAKGLSVASSTSLWICT*PNSPSP Trigger: TGGGGAGGGACTGTTTGGGCAGGTGCAGATCCACAG...AGAGGTGCTGGATGCTACCGAGAGACCTTTTGCTGAGTGTTTATTTTTCTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR-3UTR TCA 90 bp | TCATTCATTACTAACCCTTTCTTTTCCCACTTAACATACAGAGAACACACCGCGGCAGGCACTTTACAATaGACCCAAGAGAGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SFITNPFFSHLTYREHTAAGTLQ*TQESLS Trigger: AGACAGGCTCTCTTGGGTTCATTGTAAAGTGCCTGC...CGCGGTGTGTTCTCTGTATGTTAAGTGGGAAAAGAAAGGGTTAGTAATGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGTGTTGGTTCTGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCTAGTGACTGCACAGCCTaGTCAATTTCGCTGCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: VKCWFCVNSVDKGRHSDPSDCTA*SISLLL Trigger: TAAGAGCAGCGAAATTGAGCAGGCTGTGCAGTCACT...AGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090993.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCCACTTAACATACAGAGAACACACCGCGATGAATAGACTAATAAGCCAAATTTCAAACAGACAGTaGTCACAGGTACACCTGACA | + |
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Preference number: 2 (lower is better) Translates to: FSHLTYREHTAMNRLISQISNRQ*SQVHLT Trigger: TGTCAGGTGTACCTGTGAGCACTGTCTGTTTGAAAT...TTGGCTTATTAGTCTATTCATCGCGGTGTGTTCTCTGTATGTTAAGTGGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR-3UTR TCA 90 bp | CTACATCAGCTTTCCAAACCCAACTATCATCATTCATTACTAACCCTTTCTTTTCAAAGGCAGACATTCTaGTCCTGCAAAGAATTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LHQLSKPNYHHSLLTLSFQRQTF*SCKEFR Trigger: CCTAAATTCTTTGCAGGATCAGAATGTCTGCCTTTG...AAAAGAAAGGGTTAGTAATGAATGATGATAGTTGGGTTTGGAAAGCTGATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTACATCAGCTTTCCAAACCCAACTATCATCATTCATTACTAACCCTTTCCTGATAGTCAAGTGTTaGTTCTGTGTTAACTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: PSTSAFQTQLSSFITNPFLIVKC*FCVNSV Trigger: TACAGAGTTAACACAGAACCAACACTTGACTATCAG...GAAAGGGTTAGTAATGAATGATGATAGTTGGGTTTGGAAAGCTGATGTAGAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGAAAAATAAACACTCAGCAAAAGGTCTCTCGGTAGCATCCAGCACCTCTGTGTCGTCGCCCTGCTaGCTTTCCCCCTCCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SKKNKHSAKGLSVASSTSVSSPC*LSPSPR Trigger: CCTGGGGGAGGGGGAAAGCAAGCAGGGCGACGACAC...AGAGGTGCTGGATGCTACCGAGAGACCTTTTGCTGAGTGTTTATTTTTCTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR CCA 72 bp | AAACAGACAGTGCTCACAGGTACACCTGACATAATCTaGCCAGTCAGCCTGATAGTCAAGTGTTGGTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: KQTVLTGTPDII*PVSLIVKCWFC Trigger: ACAGAACCAACACTTGACTATCAGGCTGACTGGCCAGATTATGTCAGGTGTACCTGTGAGCACTGTCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| 3UTR CCA 72 bp | GACATAATCTGGCCAGTCAGCCTGATAGTCAAGTGTTaGTTCTGTGTTAACTCTGTAGACAAAGGCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: DIIWPVSLIVKC*FCVNSVDKGRH Trigger: ATGTCTGCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGACTATCAGGCTGACTGGCCAGATTATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| 3UTR GCA 72 bp | AAATCAATGCCATTTCTGTCCAGTGACTGCACAGCCTaGTCAATTTCGCTGCTCTTAAAGTTTGTGAGTACT | + |
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Preference number: 3 (lower is better) Translates to: KSMPFLSSDCTA*SISLLLKFVST Trigger: AGTACTCACAAACTTTAAGAGCAGCGAAATTGAGCAGGCTGTGCAGTCACTGGACAGAAATGGCATTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090993.8 |
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| CDS-3UTR TCA 90 bp | GGTACACCTGACATAATCTGGCCAGTCAGCCTGATAGTCAAGTGTTGGTTCTGTCACGCGGCGGAAGCGTaGGGACAGTGTGTTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GTPDIIWPVSLIVKCWFCHAAEA*GQCVPG Trigger: GCCCGGAACACACTGTCCTCACGCTTCCGCCGCGTG...ACAGAACCAACACTTGACTATCAGGCTGACTGGCCAGATTATGTCAGGTGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS-3UTR GCA 90 bp | CCAGTCAGCCTGATAGTCAAGTGTTGGTTCTGTGTTAACTCTGTAGACAAAGGCCGAAGCATGTCCCCTTaGCGCAGGAGCCCGTCTACC | + |
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Preference number: 4 (lower is better) Translates to: PVSLIVKCWFCVNSVDKGRSMSP*RRSPST Trigger: GGTAGACGGGCTCCTGCGGCAAGGGGACATGCTTCG...GCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGACTATCAGGCTGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR GCA 90 bp | TGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCTGCAAAGAATTTAGGAGCCCGCCGCCGCCGCTaGCTCTTCGTGCTCGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: CVNSVDKGRHSDPAKNLGARRRR*LFVLVY Trigger: GTAGACGAGCACGAAGAGGCAGCGGCGGCGGCGGGC...TCCTAAATTCTTTGCAGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS-3UTR TCA 90 bp | TGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCTGCAAAGAATTTAGGACACGCGGCGGAAGCGTaGGGACAGTGTGTTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: CVNSVDKGRHSDPAKNLGHAAEA*GQCVPG Trigger: GCCCGGAACACACTGTCCTCACGCTTCCGCCGCGTG...TCCTAAATTCTTTGCAGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS-3UTR CCA 90 bp | ATGCCATTTCTGTCCAGTGACTGCACAGCCTGCTCAATTTCGCTGCTCTTAAAGTTCCGCAAAGCTGCATaGAACGCCCGAAGCATGTCC | + |
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Preference number: 4 (lower is better) Translates to: MPFLSSDCTACSISLLLKFRKAA*NARSMS Trigger: GGACATGCTTCGGGCGTTCCATGCAGCTTTGCGGAA...CTTTAAGAGCAGCGAAATTGAGCAGGCTGTGCAGTCACTGGACAGAAATGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090993.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGTCCAGTGACTGCACAGCCTGCTCAATTTCGCTGCTCTTAAAGTTTGTGCTTGGTGTTGATTGGTaGGTTCCGCAAAGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: FLSSDCTACSISLLLKFVLGVDW*VPQSCM Trigger: CATGCAGCTTTGCGGAACTCACCAATCAACACCAAG...CACAAACTTTAAGAGCAGCGAAATTGAGCAGGCTGTGCAGTCACTGGACAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090993.8 |
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| CDS-3UTR CCA 90 bp | GTCAAGTGTTGGTTCTGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCTTTCCGCAAAGCTGCATaGAACGCCCGAAGCATGTCC | + |
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Preference number: 4 (lower is better) Translates to: VKCWFCVNSVDKGRHSDPFRKAA*NARSMS Trigger: GGACATGCTTCGGGCGTTCCATGCAGCTTTGCGGAA...AGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS-3UTR TCA 90 bp | GGTACACCTGACATAATCTGGCCAGTCAGCCTGATAGTCAAGTGTTGGTTCTGTCTTGATTCTTGGTGTTaGTTGGTGAGTTCCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GTPDIIWPVSLIVKCWFCLDSWC*LVSSAK Trigger: CTTTGCGGAACTCACCAATCAACACCAAGAATCAAG...ACAGAACCAACACTTGACTATCAGGCTGACTGGCCAGATTATGTCAGGTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS-3UTR GCA 90 bp | CCAGTCAGCCTGATAGTCAAGTGTTGGTTCTGTGTTAACTCTGTAGACAAAGGCAGTGACTGCACAGCCTaGTCAATTTCGCTGCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: PVSLIVKCWFCVNSVDKGSDCTA*SISLLL Trigger: TAAGAGCAGCGAAATTGAGCAGGCTGTGCAGTCACT...GCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGACTATCAGGCTGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR GCA 90 bp | GGTTTTTCCGCTTCAGAACCCAAGCTCTCCTTTTCACCACAGCCTGTGGATCTGTCATTAGCAAATCAATaGCATTTCTGTCCAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: GFSASEPKLSFSPQPVDLSLANQ*HFCPVT Trigger: AGTCACTGGACAGAAATGGCATTGATTTGCTAATGA...CAGATCCACAGGCTGTGGTGAAAAGGAGAGCTTGGGTTCTGAAGCGGAAAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR CCA 90 bp | GTCAAGTGTTGGTTCTGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCTGCCTTTTCATGCCACTaGAGTAGCACTGCACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: VKCWFCVNSVDKGRHSDPAFSCH*SSTALL Trigger: TAGCAGTGCAGTGCTACTCCAGTGGCATGAAAAGGC...AGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR CCA 90 bp | CTCCTTCTACATCAGCTTTCCAAACCCAACTATCATCATTCATTACTAACCCTTTTCAGGACTACACCCTaGGCTCGTTCCTTCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLLHQLSKPNYHHSLLTLFRTTP*ARSFTA Trigger: AGCTGTGAAGGAACGAGCCCAGGGTGTAGTCCTGAA...AAGGGTTAGTAATGAATGATGATAGTTGGGTTTGGAAAGCTGATGTAGAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR TCA 90 bp | CCTTCTACATCAGCTTTCCAAACCCAACTATCATCATTCATTACTAACCCTTTCCTTGGTGTTGATTGGTaGGTTCCGCAAAGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: PSTSAFQTQLSSFITNPFLGVDW*VPQSCM Trigger: CATGCAGCTTTGCGGAACTCACCAATCAACACCAAG...GAAAGGGTTAGTAATGAATGATGATAGTTGGGTTTGGAAAGCTGATGTAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR TCA 90 bp | CTACATCAGCTTTCCAAACCCAACTATCATCATTCATTACTAACCCTTTCTTTTCGTTCCTTCACAGCTTaGTTCTTGGTGTTGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: LHQLSKPNYHHSLLTLSFRSFTA*FLVLIG Trigger: ACCAATCAACACCAAGAATCAAGCTGTGAAGGAACG...AAAAGAAAGGGTTAGTAATGAATGATGATAGTTGGGTTTGGAAAGCTGATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR CAA 90 bp | CGTCGCCCTGCTTGCTTTCCCCCTCCCCCAGGGATGGCAGGACAGGGACACCTGCCGAAGCATGTCCCCTaGCCGCAGGAGCCCGTCTAC | + |
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Preference number: 5 (lower is better) Translates to: RRPACFPPPPGMAGQGHLPKHVP*PQEPVY Trigger: GTAGACGGGCTCCTGCGGCAAGGGGACATGCTTCGG...CAGGTGTCCCTGTCCTGCCATCCCTGGGGGAGGGGGAAAGCAAGCAGGGCGACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS TCA 90 bp | GGACTACACCCTGGGCTCGTTCCTTCACAGCTTGATTCTTGGTGTTaGTTGGTGAGTTCCGCAAAGCTGCATGGAACGCCCGAAGCATGT | + |
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Preference number: 5 (lower is better) Translates to: GLHPGLVPSQLDSWC*LVSSAKLHGTPEAC Trigger: ACATGCTTCGGGCGTTCCATGCAGCTTTGCGGAACTCACCAATCAACACCAAGAATCAAGCTGTGAAGGAACGAGCCCAGGGTGTAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR CAA 90 bp | GGTTTTTCCGCTTCAGAACCCAAGCTCTCCTTTTCACCACAGCCTGTGGATCTGTGCTCGTCTACGAATTaGTTCTCGTCAAATTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: GFSASEPKLSFSPQPVDLCSSTN*FSSNSS Trigger: CGACGAATTTGACGAGAACAAATTCGTAGACGAGCA...CAGATCCACAGGCTGTGGTGAAAAGGAGAGCTTGGGTTCTGAAGCGGAAAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS-3UTR CAA 90 bp | GTCAAGTGTTGGTTCTGTGTTAACTCTGTAGACAAAGGCAGACATTCTGATCCTTGCTCGTCTACGAATTaGTTCTCGTCAAATTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: VKCWFCVNSVDKGRHSDPCSSTN*FSSNSS Trigger: CGACGAATTTGACGAGAACAAATTCGTAGACGAGCA...AGGATCAGAATGTCTGCCTTTGTCTACAGAGTTAACACAGAACCAACACTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS-3UTR CAA 90 bp | ACTAACCCTTTCTTTTCCCACTTAACATACAGAGAACACACCGCGATGAATAGATCGTTCCTTCACAGCTaGATTCTTGGTGTTGATTGG | + |
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Preference number: 5 (lower is better) Translates to: TNPFFSHLTYREHTAMNRSFLHS*ILGVDW Trigger: CCAATCAACACCAAGAATCAAGCTGTGAAGGAACGA...TCTATTCATCGCGGTGTGTTCTCTGTATGTTAAGTGGGAAAAGAAAGGGTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS CAA 72 bp | GCCGCCGCCGCTGCCTCTTCGTGCTCGTCTACGAATTaGTTCTCGTCAAATTCGTCGATATCCACGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AAAAASSCSSTN*FSSNSSISTRR Trigger: CCGCCGCGTGGATATCGACGAATTTGACGAGAACAAATTCGTAGACGAGCACGAAGAGGCAGCGGCGGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090993.8 ENSMUST00000112862.7 |
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| CDS CCA 72 bp | TTCTTGGTGTTGATTGGTGAGTTCCGCAAAGCTGCATaGAACGCCCGAAGCATGTCCCCTCGCAGGGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: FLVLIGEFRKAA*NARSMSPRRGR Trigger: CCGACCCCTGCGAGGGGACATGCTTCGGGCGTTCCATGCAGCTTTGCGGAACTCACCAATCAACACCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090993.8 |
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| CDS CCA 72 bp | TTCTTGGTGTTGATTGGTGAGTTCCGCAAAGCTGCATaGAACGCCCGAAGCATGTCCCCTTGCCGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FLVLIGEFRKAA*NARSMSPCRRS Trigger: GCTCCTGCGGCAAGGGGACATGCTTCGGGCGTTCCATGCAGCTTTGCGGAACTCACCAATCAACACCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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| CDS TCA 72 bp | CCTGGGCTCGTTCCTTCACAGCTTGATTCTTGGTGTTaGTTGGTGAGTTCCGCAAAGCTGCATGGAACGCCC | + |
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Preference number: 6 (lower is better) Translates to: PGLVPSQLDSWC*LVSSAKLHGTP Trigger: GGGCGTTCCATGCAGCTTTGCGGAACTCACCAATCAACACCAAGAATCAAGCTGTGAAGGAACGAGCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112862.7 |
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