Pregenerated sensors for ARPC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006304Ensembl transcript IDs: ENSMUST00000006467.14, ENSMUST00000113819.2, ENSMUST00000113820.9, ENSMUST00000185733.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TCGTTTCTGCAGGTTATTTGCCAAACTCGTACAAAATaGAACCCAAATGGAGAATCCCTCAAGAACCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SFLQVICQTRTK*NPNGESLKNLE Trigger: CTCCAGGTTCTTGAGGGATTCTCCATTTGGGTTCCATTTTGTACGAGTTTGGCAAATAACCTGCAGAAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | AGTAGCAAGCAGTCCAGCCTTCGGTCGACAGCGCTTCCTCCTCAGTTCCCAAGACGAGCGTCTCCTCGATaGTGCGGTTGTTCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSKQSSLRSTALPPQFPRRASPR*CGCSPP Trigger: TGGAGGTGAACAACCGCATCATCGAGGAGACGCTCG...TCTTGGGAACTGAGGAGGAAGCGCTGTCGACCGAAGGCTGGACTGCTTGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | GAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCACCGCGTTCTCGAACTTaGGCGCGAGCGTCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: ENPSRTWRRCNMKGYDYPPRSRT*ARASPR Trigger: TCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGG...TGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | CTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCAGCCTCGGCATCTGGGCGTaGACGGTTGAGCACCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LEKVQHEGLRLSSSKQSSLGIWA*TVEHLK Trigger: CTTAAGGTGCTCAACCGTGCACGCCCAGATGCCGAG...GCTGGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCATGGCTGAAAAGGACCTaGGGGGCTGTGTGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSRTWRRCNMKGYDYPVAWLKRT*GAVWLA Trigger: AGCCAGCCACACAGCCCCCCAGGTCCTTTTCAGCCA...TGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | ATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCGCGTTCTCGAACTTaGGCGCGAGCGTCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MENPSRTWRRCNMKGYDYPRSRT*ARASPR Trigger: TCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGG...ATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCCTCGGCATCTGGGCGTaGACGGTTGAGCACCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSLGIWA*TVEHLK Trigger: CTTAAGGTGCTCAACCGTGCACGCCCAGATGCCGAG...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCACTCGAGCAGTGGCATTaGTGTGGCGAGGGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRTWRRCNMKGYDYPVALEQWH*CGEGTA Trigger: TGCTGTTCCCTCGCCACACCAATGCCACTGCTCGAG...TGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | AAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGCTCGGCATCTGGGCGTaGACGGTTGAGCACCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: KNLEKVQHEGLRLSSSKQLGIWA*TVEHLK Trigger: CTTAAGGTGCTCAACCGTGCACGCCCAGATGCCGAG...CTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | ATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATTGGCTGAAAAGGACCTaGGGGGCTGTGTGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MENPSRTWRRCNMKGYDYWLKRT*GAVWLA Trigger: AGCCAGCCACACAGCCCCCCAGGTCCTTTTCAGCCA...ATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | TCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCGCAGTGGCATTGGTGTaGCGAGGGAACAGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKNLEKVQHEGLRLSSSAVALV*RGNSTK Trigger: CTTTGTGCTGTTCCCTCGCCACACCAATGCCACTGC...GCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCGCAGTGGCATTGGTGTaGCGAGGGAACAGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSAVALV*RGNSTK Trigger: CTTTGTGCTGTTCCCTCGCCACACCAATGCCACTGC...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCTGTTGTCTCGAGCAGTaGCATTGGTGTGGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSCCLEQ*HWCGEG Trigger: TCCCTCGCCACACCAATGCCACTGCTCGAGACAACA...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CCA 90 bp | ACCCAAATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACTGTTGTCTCGAGCAGTaGCATTGGTGTGGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQMENPSRTWRRCNMKGYCCLEQ*HWCGEG Trigger: TCCCTCGCCACACCAATGCCACTGCTCGAGACAACA...GTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTACGAGCGTCTCCTCGATaGTGCGGTTGTTCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGESLKNLEKVQHEGLRLRASPR*CGCSPP Trigger: TGGAGGTGAACAACCGCATCATCGAGGAGACGCTCG...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCACGTGTGGATCAGGTTaGTGGTGTTGTCTCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSTCGSG*WCCLEQ Trigger: CTGCTCGAGACAACACCATCAACCTGATCCACACGT...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTACGTGTGGATCAGGTTaGTGGTGTTGTCTCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESLKNLEKVQHEGLRLSSTCGSG*WCCLEQ Trigger: CTGCTCGAGACAACACCATCAACCTGATCCACACGT...ACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | AGTAGCAAGCAGTCCAGCCTTCGGTCGACAGCGCTTCCTCCTCAGTTCCCAAGAGACGCCATCAAAATCTaGAAATGTTACTTCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: SSKQSSLRSTALPPQFPRDAIKI*KCYFYS Trigger: GCTGTAGAAGTAACATTTGCAGATTTTGATGGCGTC...TCTTGGGAACTGAGGAGGAAGCGCTGTCGACCGAAGGCTGGACTGCTTGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | CTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCAGCTTCAACATGCCAGCCTaGTGCACAATAGAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKVQHEGLRLSSSKQSSFNMPA*CTIESL Trigger: CAAGGATTCTATTGTGCATCAGGCTGGCATGTTGAA...GCTGGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCGGAACAGCACAAAGGTaGTGTAGCCAATGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSGTAQR*CSQCCH Trigger: GTGACAACATTGGCTACATCACCTTTGTGCTGTTCC...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | ACCCAAATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGGAACAGCACAAAGGTaGTGTAGCCAATGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TQMENPSRTWRRCNMKGYGTAQR*CSQCCH Trigger: GTGACAACATTGGCTACATCACCTTTGTGCTGTTCC...GTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTAACGTGTGGATCAGGTTaGTGGTGTTGTCTCGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NGESLKNLEKVQHEGLRLTCGSG*WCCLEQ Trigger: CTGCTCGAGACAACACCATCAACCTGATCCACACGT...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | ACCCAAATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACTTCAACATGCCAGCCTaGTGCACAATAGAATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TQMENPSRTWRRCNMKGYFNMPA*CTIESL Trigger: CAAGGATTCTATTGTGCATCAGGCTGGCATGTTGAA...GTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATTTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | AAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGGGAACAGCACAAAGGTaGTGTAGCCAATGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KNLEKVQHEGLRLSSSKQGTAQR*CSQCCH Trigger: GTGACAACATTGGCTACATCACCTTTGTGCTGTTCC...CTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | ACCCAAATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACCTCATCAGCTCCATGTaGCTGAAGTTCCTTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: TQMENPSRTWRRCNMKGYLISSM*LKFLVE Trigger: TTCTACAAGGAACTTCAGGCACATGGAGCTGATGAG...GTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATTTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTTTCAACATGCCAGCCTaGTGCACAATAGAATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ESLKNLEKVQHEGLRLSSFNMPA*CTIESL Trigger: CAAGGATTCTATTGTGCATCAGGCTGGCATGTTGAA...ACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR TCA 90 bp | ACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCAGTCTCCATTAGGATTTaGAATATGATAAAGGACGCC | + |
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Preference number: 4 (lower is better) Translates to: TWRRCNMKGYDYPVASSPVSIRI*NMIKDA Trigger: GGCGTCCTTTATCATATTTCAAATCCTAATGGAGAC...TGGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTACTCATCAGCTCCATGTaGCTGAAGTTCCTTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGESLKNLEKVQHEGLRLLISSM*LKFLVE Trigger: TTCTACAAGGAACTTCAGGCACATGGAGCTGATGAG...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | GAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTGACGCCATCAAAATCTaGAAATGTTACTTCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: ESLKNLEKVQHEGLRLSSDAIKI*KCYFYS Trigger: GCTGTAGAAGTAACATTTGCAGATTTTGATGGCGTC...ACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR GCA 90 bp | GAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGACGCCATCAAAATCTaGAAATGTTACTTCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: ENPSRTWRRCNMKGYDYPDAIKI*KCYFYS Trigger: GCTGTAGAAGTAACATTTGCAGATTTTGATGGCGTC...TGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AGTAGCAAGCAGTCCAGCCTTCGGTCGACAGCGCTTCCTCCTCAGTTCCCAAGATCTCGAGCAGTGGCATaGGTGTGGCGAGGGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: SSKQSSLRSTALPPQFPRSRAVA*VWRGNS Trigger: GCTGTTCCCTCGCCACACCAATGCCACTGCTCGAGA...TCTTGGGAACTGAGGAGGAAGCGCTGTCGACCGAAGGCTGGACTGCTTGCTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS CCA 90 bp | GTGTCTTTCAGCTCTAGAGGAGGTTCCCTGTGGCTGAAAAGGACCTaGGGGGCTGTGTGGCTGGCTCTTCGTCCTTCTTTGAACTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VSFSSRGGSLWLKRT*GAVWLALRPSLNSC Trigger: GCAGGAGTTCAAAGAAGGACGAAGAGCCAGCCACACAGCCCCCCAGGTCCTTTTCAGCCACAGGGAACCTCCTCTAGAGCTGAAAGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSAAFSN*SASVSS Trigger: CGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGC...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: KNLEKVQHEGLRLSSSKQAAFSN*SASVSS Trigger: CGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGC...CTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AGTAGCAAGCAGTCCAGCCTTCGGTCGACAGCGCTTCCTCCTCAGTTCCCAAGAGCTCTTCGTCCTTCTTaGAACTCCTGCATGAACACC | + |
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Preference number: 5 (lower is better) Translates to: SSKQSSLRSTALPPQFPRALRPS*NSCMNT Trigger: GGTGTTCATGCAGGAGTTCAAAGAAGGACGAAGAGC...TCTTGGGAACTGAGGAGGAAGCGCTGTCGACCGAAGGCTGGACTGCTTGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AGTAGCAAGCAGTCCAGCCTTCGGTCGACAGCGCTTCCTCCTCAGTTCCCAAGAAACGTGTGGATCAGGTaGATGGTGTTGTCTCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSKQSSLRSTALPPQFPRNVWIR*MVLSRA Trigger: TGCTCGAGACAACACCATCAACCTGATCCACACGTT...TCTTGGGAACTGAGGAGGAAGCGCTGTCGACCGAAGGCTGGACTGCTTGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | CTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCAGCTCTGGGCGTGCACGGTaGAGCACCTTAAGGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: LEKVQHEGLRLSSSKQSSSGRAR*STLRKS Trigger: CGACTTCCTTAAGGTGCTCAACCGTGCACGCCCAGA...GCTGGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | CTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCAGCTCTACAGCTTCTGGTTaGTTTCGCGCCCCGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LEKVQHEGLRLSSSKQSSSTASG*FRAPWL Trigger: AAGCCACGGGGCGCGAAACAAACCAGAAGCTGTAGA...GCTGGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113819.2 |
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| CDS-3UTR CAA 90 bp | TCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: SLKNLEKVQHEGLRLSSSSSMMR*FTSSRI Trigger: GATCCTGCTGGAGGTGAACAACCGCATCATCGAGGA...GCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCTCGAGCAGTGGCATaGGTGTGGCGAGGGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: NGESLKNLEKVQHEGLRLSRAVA*VWRGNS Trigger: GCTGTTCCCTCGCCACACCAATGCCACTGCTCGAGA...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | ATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATTCTCGAGCAGTGGCATaGGTGTGGCGAGGGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: MENPSRTWRRCNMKGYDYSRAVA*VWRGNS Trigger: GCTGTTCCCTCGCCACACCAATGCCACTGCTCGAGA...ATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | GAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCATCTGGGCGTGCACGGTaGAGCACCTTAAGGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: ENPSRTWRRCNMKGYDYPSGRAR*STLRKS Trigger: CGACTTCCTTAAGGTGCTCAACCGTGCACGCCCAGA...TGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | ATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATTCTGGGCGTGCACGGTaGAGCACCTTAAGGAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: MENPSRTWRRCNMKGYDYSGRAR*STLRKS Trigger: CGACTTCCTTAAGGTGCTCAACCGTGCACGCCCAGA...ATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: NGESLKNLEKVQHEGLRLSSMMR*FTSSRI Trigger: GATCCTGCTGGAGGTGAACAACCGCATCATCGAGGA...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | ACCCAAATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACATCAGGTTGATGGTGTaGTCTCGAGCAGTGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: TQMENPSRTWRRCNMKGYIRLMV*SRAVAL Trigger: CAATGCCACTGCTCGAGACAACACCATCAACCTGAT...GTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAACGTGTGGATCAGGTaGATGGTGTTGTCTCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: ESLKNLEKVQHEGLRLSSNVWIR*MVLSRA Trigger: TGCTCGAGACAACACCATCAACCTGATCCACACGTT...ACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTAGCTCTTCGTCCTTCTTaGAACTCCTGCATGAACACC | + |
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Preference number: 5 (lower is better) Translates to: NGESLKNLEKVQHEGLRLALRPS*NSCMNT Trigger: GGTGTTCATGCAGGAGTTCAAAGAAGGACGAAGAGC...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTAATCAGGTTGATGGTGTaGTCTCGAGCAGTGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: NGESLKNLEKVQHEGLRLIRLMV*SRAVAL Trigger: CAATGCCACTGCTCGAGACAACACCATCAACCTGAT...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | ATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATAACGTGTGGATCAGGTaGATGGTGTTGTCTCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: MENPSRTWRRCNMKGYDYNVWIR*MVLSRA Trigger: TGCTCGAGACAACACCATCAACCTGATCCACACGTT...ATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS GCA 90 bp | ATCTGGGCGTGCACGGTTGAGCACCTTAAGGAAGTCGGATGTTTTTaGTCGCATTCGTGTATGAATATAGGCCTTAGAGCACTTAATGTG | + |
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Preference number: 5 (lower is better) Translates to: IWACTVEHLKEVGCF*SHSCMNIGLRALNV Trigger: CACATTAAGTGCTCTAAGGCCTATATTCATACACGAATGCGAGCAAAAACATCCGACTTCCTTAAGGTGCTCAACCGTGCACGCCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | ACCCAAATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGCCCTCTTCTTGGAATaGGAAGTATTTCTCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: TQMENPSRTWRRCNMKGYALFLE*EVFLKH Trigger: GTGTTTGAGAAATACTTCCAATTCCAAGAAGAGGGC...GTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATTTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCAAGCAGTCCTTCTTTGCCCTCTTCTaGGAATTGGAAGTATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: NLEKVQHEGLRLSSSKQSFFALF*ELEVFL Trigger: GAGAAATACTTCCAATTCCAAGAAGAGGGCAAAGAA...GGACTGCTTGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | CCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATCCAGTAGCATTCTTTGCCCTCTTCTaGGAATTGGAAGTATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PSRTWRRCNMKGYDYPVAFFALF*ELEVFL Trigger: GAGAAATACTTCCAATTCCAAGAAGAGGGCAAAGAA...TGCTACTGGATAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS TCA 90 bp | TTCTCAAACACAGAGGCAAAACAATTTCGCTTCAACATGCCAGCCTaGTGCACAATAGAATCCTTGGATGCAGGTAGATTTTCCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: FSNTEAKQFRFNMPA*CTIESLDAGRFSRS Trigger: TGACCTGGAAAATCTACCTGCATCCAAGGATTCTATTGTGCATCAGGCTGGCATGTTGAAGCGAAATTGTTTTGCCTCTGTGTTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS-3UTR CAA 90 bp | AATGGAGAATCCCTCAAGAACCTGGAGAAGGTGCAACATGAAGGGCTACGATTATTCTTTGCCCTCTTCTaGGAATTGGAAGTATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: NGESLKNLEKVQHEGLRLFFALF*ELEVFL Trigger: GAGAAATACTTCCAATTCCAAGAAGAGGGCAAAGAA...TAATCGTAGCCCTTCATGTTGCACCTTCTCCAGGTTCTTGAGGGATTCTCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS CAA 72 bp | TCGAACTTGAGCGCGAGCGTCTCCTCGATGATGCGGTaGTTCACCTCCAGCAGGATCATGGCGGCGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SNLSASVSSMMR*FTSSRIMAAAV Trigger: GACAGCCGCCGCCATGATCCTGCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185733.2 |
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| CDS CAA 72 bp | GCTTCTGGTTTGTTTCCGGCGGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCGATGATGCGGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ASGLFPAAAFSN*SASVSSMMRLF Trigger: GAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGCCGCCGGAAACAAACCAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS CAA 90 bp | ACTTCTACAGCTTCTGGTTTGTTTCCGGCGGCCGCGTTCTCGAACTaGAGCGCGAGCGTCTCCTCGATGATGCGGTTGTTCACCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSTASGLFPAAAFSN*SASVSSMMRLFTSS Trigger: GCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGCCGCCGGAAACAAACCAGAAGCTGTAGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006467.14 ENSMUST00000113820.9 |
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| CDS TCA 72 bp | GGTAGTGCAGATAGTCCCGGAACGTGTGGATCAGGTTaGTGGTGTTGTCTCGAGCAGTGGCATTGGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSADSPGTCGSG*WCCLEQWHWCG Trigger: GCCACACCAATGCCACTGCTCGAGACAACACCATCAACCTGATCCACACGTTCCGGGACTATCTGCACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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| CDS CCA 72 bp | GCCATCAAAATCTGCAAATGTTACTTCTACAGCTTCTaGTTTGTTTCGCGCCCCGTGGCTTCCCACGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: AIKICKCYFYSF*FVSRPVASHVH Trigger: ATGGACGTGGGAAGCCACGGGGCGCGAAACAAACCAGAAGCTGTAGAAGTAACATTTGCAGATTTTGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113819.2 |
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| CDS GCA 72 bp | TGCACGGTTGAGCACCTTAAGGAAGTCGGATGTTTTTaGTCGCATTCGTGTATGAATATAGGCCTTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: CTVEHLKEVGCF*SHSCMNIGLRA Trigger: TGCTCTAAGGCCTATATTCATACACGAATGCGAGCAAAAACATCCGACTTCCTTAAGGTGCTCAACCGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006467.14 ENSMUST00000113819.2 ENSMUST00000113820.9 |
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