Pregenerated sensors for ARPC1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029622Ensembl transcript IDs: ENSMUST00000085679.13, ENSMUST00000136074.2, ENSMUST00000138922.2, ENSMUST00000196111.5
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCAGTGCTGAGCTGCCCCTGTGGTGCCCTGGCGCTGCCTGCCTaGTCATATCCTAGTCTTCTGCTGGAGGAAGGCTCCCAGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: GAVLSCPCGALALPA*SYPSLLLEEGSQDS Trigger: GGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGGCAGCGCCAGGGCACCACAGGGGCAGCTCAGCACTGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 90 bp | CCTGTGGTGCCCTGGCGCTGCCTGCCTGGTCATATCCTAGTCTTCTaGTGGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCTTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: PVVPWRCLPGHILVF*WRKAPRTPHSSPWH Trigger: GTGCCAAGGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGGCAGCGCCAGGGCACCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 90 bp | GTCTTCTGCTGGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCTTaGCACTGTGACAGGGAGGAAGCAGGCCTGTTGCTAGCCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VFCWRKAPRTPHSSP*HCDREEAGLLLASE Trigger: CTCACTGGCTAGCAACAGGCCTGCTTCCTCCCTGTCACAGTGCCAAGGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 90 bp | GCTTGTGGGTGGGCCACTCAGTTGGGCACAGCAGGAACATCTGGATaGCTGGCCCTGTGGCCTCAGCAGAAATTTTCTCCCTTGGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: ACGWATQLGTAGTSG*LALWPQQKFSPLGG Trigger: GCCACCCAAGGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCACCCACAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR CCA 90 bp | GACGGCTTGTGGGTGGGCCACTCAGTTGGGCACAGCAGGAACATCTaGATGGCTGGCCCTGTGGCCTCAGCAGAAATTTTCTCCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: DGLWVGHSVGHSRNI*MAGPVASAEIFSLG Trigger: CCCAAGGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCACCCACAAGCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR CCA 90 bp | GCCACTCAGTTGGGCACAGCAGGAACATCTGGATGGCTGGCCCTGTaGCCTCAGCAGAAATTTTCTCCCTTGGGTGGCAGCCTGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: ATQLGTAGTSGWLAL*PQQKFSPLGGSLDA Trigger: AGCATCCAGGCTGCCACCCAAGGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR GCA 90 bp | TTTGTAAGAGGTCTGTGGGTGGGGTTCCAACACCAAATTAAAGCGTaGTGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: FVRGLWVGFQHQIKA*CLAWVQKGGCGFCP Trigger: TGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTTAATTTGGTGTTGGAACCCCACCCACAGACCTCTTACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 90 bp | AAATCTGCCTGCCTCTGTCTCCCGAGTGCTGGGATTAAAAGCGAGTaGCACCACGCCCGGCTCACATTTGGTATGTTTATTAGCCCACAT | + |
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Preference number: 1 (lower is better) Translates to: KSACLCLPSAGIKSE*HHARLTFGMFISPH Trigger: ATGTGGGCTAATAAACATACCAAATGTGAGCCGGGCGTGGTGGCACTCGCTTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 90 bp | TCCTTGTTTGGCAGTTTCTCTATCAGCTATCTCTATCTTTGCTCATaGCAGTACCAGCAGGGTTTAGGCACACACCTACCTGGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: SLFGSFSISYLYLCS*QYQQGLGTHLPGKT Trigger: TGTCTTCCCAGGTAGGTGTGTGCCTAAACCCTGCTGGTACTGCCATGAGCAAAGATAGAGATAGCTGATAGAGAAACTGCCAAACAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCTTGGCACTGTGACAGGGTCCCAGCAGCTGGGATaGGGGCAGCAGTCTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: AGGRLPGLPTAVLGTVTGSQQLG*GQQSSL Trigger: CAGACTAGACTGCTGCCCTCATCCCAGCTGCTGGGA...CCCTGTCACAGTGCCAAGGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CAA 90 bp | GCTGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTaGAAGGAGACCATGGATGTGGTGGCCTTCAGCGTAGGGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: AAWLGCRRVGVAFAH*KETMDVVAFSVGPV Trigger: GACAGGCCCTACGCTGAAGGCCACCACATCCATGGTCTCCTTCAAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGGCTGGTCCTGACAGCTaGAGCCCAGGCAGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RFLRASPEPTADWSSAELAGPDS*SPGRRE Trigger: CTCTCTCCTGCCTGGGCTTCAGCTGTCAGGACCAGC...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR TCA 90 bp | GGACGTAAGGGTCTGGATGTCTCAGGGTCAGATATGGGTGTGGCTGCCAGAGACGTTCAAGGCTGGTCCTaGCAGCTGAAGCCCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRKGLDVSGSDMGVAARDVQGWS*QLKPRQ Trigger: CTGCCTGGGCTTCAGCTGTCAGGACCAGCCTTGAAC...GTCTCTGGCAGCCACACCCATATCTGACCCTGAGACATCCAGACCCTTACGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGTACATTCAGGCCCAGTaGAAGGCTCCTGTCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RFLRASPEPTADWSSAELYIQAQ*KAPVLA Trigger: GGCCAGGACAGGAGCCTTTCACTGGGCCTGAATGTA...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR CCA 90 bp | CGTAAGGGTCTGGATGTCTCAGGGTCAGATATGGGTGTGGCTGCCAGAGACTCACTCCCTCCCAGCAGCTaGGATGAGGGCAGCAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: RKGLDVSGSDMGVAARDSLPPSS*DEGSSL Trigger: TAGACTGCTGCCCTCATCCCAGCTGCTGGGAGGGAG...TGAGTCTCTGGCAGCCACACCCATATCTGACCCTGAGACATCCAGACCCTTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR TCA 90 bp | GTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGACCCCTCCCAGCAGCTGGGATaGGGGCAGCAGTCTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: VYCILETFSKAALSLPDPSQQLG*GQQSSL Trigger: CAGACTAGACTGCTGCCCTCATCCCAGCTGCTGGGA...GGGGTCGGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGTGGCTTTTGCCCACTTaGAGGAGACCATGGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: RFLRASPEPTADWSSAELWLLPT*RRPWMW Trigger: CCACATCCATGGTCTCCTTCAAGTGGGCAAAAGCCA...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CAA 90 bp | AGAGGTCTGTGGGTGGGGTTCCAACACCAAATTAAAGCGTGCTGCTaGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTTGAA | + |
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Preference number: 2 (lower is better) Translates to: RGLWVGFQHQIKACC*AWVQKGGCGFCPLE Trigger: TTCAAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTTAATTTGGTGTTGGAACCCCACCCACAGACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTGGTCATATCCTAGTCTTCTGCTGGAGGAAGGCTCCCAGGACTCCCCAGATACTGCAACTGAATaGCATTGTCCTTTGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PAWSYPSLLLEEGSQDSPDTATE*HCPLCF Trigger: AAAGCACAAAGGACAATGTCATTCAGTTGCAGTATC...TGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCACTCCCTCCCAGCAGCTaGGATGAGGGCAGCAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: PASSFVAVYCILETFSKALPPSS*DEGSSL Trigger: TAGACTGCTGCCCTCATCCCAGCTGCTGGGAGGGAG...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| 3UTR-3UTR CCA 90 bp | GAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAAGTTGGATGGCTGGCCCTGTaGCCTCAGCAGAAATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: EYTERGWNCRGLLGFPEVGWLAL*PQQKFS Trigger: AGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCC...AACTTCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR CAA 90 bp | GAGATGACATTTGAGTCCATTTTTAGTGACCACTACCACATGCCTTaGGGCTTGACTCTGATTGATGGCCTCTGGAGAGGATCCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EMTFESIFSDHYHMP*GLTLIDGLWRGSCS Trigger: GCTGCAGGATCCTCTCCAGAGGCCATCAATCAGAGTCAAGCCCAAAGGCATGTGGTAGTGGTCACTAAAAATGGACTCAAATGTCATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR GCA 90 bp | GCCCACATTTTGAAGCAGTTCATGACCAGCATTGTGCTTTGGGTTTTTGTTTCTAGGCAGTTCCCCTCCTaGCTCTTCCTTTGTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AHILKQFMTSIVLWVFVSRQFPS*LFLCSS Trigger: ACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT...AGAAACAAAAACCCAAAGCACAATGCTGGTCATGAACTGCTTCAAAATGTGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CAA 90 bp | GCCACCACGCCCGGCTCACATTTGGTATGTTTATTAGCCCACATTTaGAAGCAGTTCATGACCAGCATTGTGCTTTGGGTTTTTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: ATTPGSHLVCLLAHI*KQFMTSIVLWVFVS Trigger: AGAAACAAAAACCCAAAGCACAATGCTGGTCATGAACTGCTTCAAAATGTGGGCTAATAAACATACCAAATGTGAGCCGGGCGTGGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 72 bp | GTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTaGCCCTGTGGTGCCCTGGCGCTGCCTGCCTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: VLNLQQTGAVLS*PCGALALPAWS Trigger: TGACCAGGCAGGCAGCGCCAGGGCACCACAGGGGCAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | CTGAGCTGCCCCTGTGGTGCCCTGGCGCTGCCTGCCTaGTCATATCCTAGTCTTCTGCTGGAGGAAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSCPCGALALPA*SYPSLLLEEGS Trigger: GGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGGCAGCGCCAGGGCACCACAGGGGCAGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 72 bp | CCCTGGCGCTGCCTGCCTGGTCATATCCTAGTCTTCTaGTGGAGGAAGGCTCCCAGGACTCCCCACAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PWRCLPGHILVF*WRKAPRTPHSS Trigger: ACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGGCAGCGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | TGGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCTTaGCACTGTGACAGGGAGGAAGCAGGCCTGTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: WRKAPRTPHSSP*HCDREEAGLLL Trigger: TAGCAACAGGCCTGCTTCCTCCCTGTCACAGTGCCAAGGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | TGGCGCTGCCTGCCTGGTCATATCCTAGTCTTCTGCTaGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: WRCLPGHILVFC*RKAPRTPHSSP Trigger: AGGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGGCAGCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | CCAGAAGTTCCCAGTAGCCACCAGACGGCTTGTGGGTaGGCCACTCAGTTGGGCACAGCAGGAACATCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PEVPSSHQTACG*ATQLGTAGTSG Trigger: TCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCACCCACAAGCCGTCTGGTGGCTACTGGGAACTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGGTGCCCTGGCGCTGCCTGCCTGGTCATATCCTAGTCTTCTGCTGGAGGCACATGCCTTTGGGCTaGACTCTGATTGATGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PVVPWRCLPGHILVFCWRHMPLG*TLIDGL Trigger: GAGGCCATCAATCAGAGTCAAGCCCAAAGGCATGTG...CCTCCAGCAGAAGACTAGGATATGACCAGGCAGGCAGCGCCAGGGCACCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR CAA 90 bp | GCTTGTGGGTGGGCCACTCAGTTGGGCACAGCAGGAACATCTGGATGGCTGGCCCAGAAATTTTCTCCCTaGGGTGGCAGCCTGGATGCT | + |
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Preference number: 3 (lower is better) Translates to: ACGWATQLGTAGTSGWLAQKFSP*GGSLDA Trigger: AGCATCCAGGCTGCCACCCAAGGGAGAAAATTTCTG...GGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCACCCACAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR GCA 72 bp | GGTCTGTGGGTGGGGTTCCAACACCAAATTAAAGCGTaGTGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GLWVGFQHQIKA*CLAWVQKGGCG Trigger: GCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTTAATTTGGTGTTGGAACCCCACCCACAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | TTGGGCACAGCAGGAACATCTGGATGGCTGGCCCTGTaGCCTCAGCAGAAATTTTCTCCCTTGGGTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LGTAGTSGWLAL*PQQKFSPLGGS Trigger: GCTGCCACCCAAGGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR CCA 72 bp | TGGGCCACTCAGTTGGGCACAGCAGGAACATCTGGATaGCTGGCCCTGTGGCCTCAGCAGAAATTTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: WATQLGTAGTSG*LALWPQQKFSP Trigger: GGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR CCA 72 bp | TGGGTGGGCCACTCAGTTGGGCACAGCAGGAACATCTaGATGGCTGGCCCTGTGGCCTCAGCAGAAATTTTC | + |
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Preference number: 3 (lower is better) Translates to: WVGHSVGHSRNI*MAGPVASAEIF Trigger: GAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| 3UTR GCA 72 bp | TGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTaGCCACTTGAAGGAGACCATGGATGTGGTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: CLAWVQKGGCGF*PLEGDHGCGGL Trigger: AAGGCCACCACATCCATGGTCTCCTTCAAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTaGCTCTGTCTCCCGAGTGCTGGGATTAAAAGCGAG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGIKSE Trigger: CTCGCTTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | GGGTTCCAACACCAAATTAAAGCGTGCTGCTTGGCTTaGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTT | + |
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Preference number: 3 (lower is better) Translates to: GFQHQIKACCLA*VQKGGCGFCPL Trigger: AAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTTAATTTGGTGTTGGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | CCTTTGTGCTTTCTAAGTTGGAGGGACGTAAGGGTCTaGATGTCTCAGGGTCAGATATGGGTGTGGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: PLCFLSWRDVRV*MSQGQIWVWLP Trigger: TGGCAGCCACACCCATATCTGACCCTGAGACATCCAGACCCTTACGTCCCTCCAACTTAGAAAGCACAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 72 bp | GGGTCTGGATGTCTCAGGGTCAGATATGGGTGTGGCTaGCAGAGACTCAAGCATAACTTAATGGCAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: GSGCLRVRYGCG*QRLKHNLMAEM Trigger: CATCTCTGCCATTAAGTTATGCTTGAGTCTCTGGCAGCCACACCCATATCTGACCCTGAGACATCCAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | ACTTGTACATTCAGGCCCAGTGAAAGGCTCCTGTCCTaGCCCCATCTGAGTGAGATACTGCAACTGAATGAC | + |
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Preference number: 3 (lower is better) Translates to: TCTFRPSERLLS*PHLSEILQLND Trigger: GTCATTCAGTTGCAGTATCTCACTCAGATGGGGCCAGGACAGGAGCCTTTCACTGGGCCTGAATGTACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | ATGGCAGTACCAGCAGGGTTTAGGCACACACCTACCTaGGAAGACACTGTCAGGCTTTTGCACAAAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: MAVPAGFRHTPT*EDTVRLLHKVR Trigger: CCTTACTTTGTGCAAAAGCCTGACAGTGTCTTCCCAGGTAGGTGTGTGCCTAAACCCTGCTGGTACTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR-3UTR CAA 90 bp | CGTAAGGGTCTGGATGTCTCAGGGTCAGATATGGGTGTGGCTGCCAGAGACTCATTATTAGCCCACATTTaGAAGCAGTTCATGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: RKGLDVSGSDMGVAARDSLLAHI*KQFMTS Trigger: GCTGGTCATGAACTGCTTCAAAATGTGGGCTAATAA...TGAGTCTCTGGCAGCCACACCCATATCTGACCCTGAGACATCCAGACCCTTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 72 bp | AGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTaGATCCTAGAAACATTTAGCAAAGCAGCCCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: SSPPASSFVAVY*ILETFSKAALS Trigger: GCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| 3UTR CCA 72 bp | GGCAGTTTCTCTATCAGCTATCTCTATCTTTGCTCATaGCAGTACCAGCAGGGTTTAGGCACACACCTACCT | + |
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Preference number: 3 (lower is better) Translates to: GSFSISYLYLCS*QYQQGLGTHLP Trigger: AGGTAGGTGTGTGCCTAAACCCTGCTGGTACTGCCATGAGCAAAGATAGAGATAGCTGATAGAGAAACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | TCTGGAGAGGATCCTGCAGCTACCCAGATTCAAGGTTaGCTCCAAAATGAGGAAGGTGATAGCCTTTTAACA | + |
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Preference number: 3 (lower is better) Translates to: SGEDPAATQIQG*LQNEEGDSLLT Trigger: TGTTAAAAGGCTATCACCTTCCTCATTTTGGAGCCAACCTTGAATCTGGGTAGCTGCAGGATCCTCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR GCA 72 bp | TTGTTTGGCAGTTTCTCTATCAGCTATCTCTATCTTTaGTCATGGCAGTACCAGCAGGGTTTAGGCACACAC | + |
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Preference number: 3 (lower is better) Translates to: LFGSFSISYLYL*SWQYQQGLGTH Trigger: GTGTGTGCCTAAACCCTGCTGGTACTGCCATGAGCAAAGATAGAGATAGCTGATAGAGAAACTGCCAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| 3UTR CCA 72 bp | AGAACTAATGGGCACTTATGGCTTGATGCTTCTGGTTaGGTGATTTCTAGCTTACAGAAGGATGGTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RTNGHLWLDASG*VISSLQKDGPH Trigger: GTGAGGACCATCCTTCTGTAAGCTAGAAATCACCCAACCAGAAGCATCAAGCCATAAGTGCCCATTAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| 3UTR TCA 72 bp | GCTTACAGAAGGATGGTCCTCACTATAGGAAATCTTTaGTGTAACTGTCAAATAATTGTCAGTTCAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: AYRRMVLTIGNL*CNCQIIVSSDA Trigger: AGCATCTGAACTGACAATTATTTGACAGTTACATCAAAGATTTCCTATAGTGAGGACCATCCTTCTGTAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | GGGCCACTCAGTTGGGCACAGCAGGAACATCTGGATGGCTGGCCCTGTGGCCTCCTGAGGCCTCGGTCTTaGAGTCCTTCACGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPLSWAQQEHLDGWPCGLLRPRS*SPSRPR Trigger: TCTGGGACGTGAAGGACTTCAAGACCGAGGCCTCAG...GAGGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGCCACTCAGTTGGGCACAGCAGGAACATCTGGATGGCTGGCCCTGTGGCCCCTTCACGTCCCAGATaGTCATGCCGCCATCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VGHSVGHSRNIWMAGPVAPSRPR*SCRHPC Trigger: GCATGGATGGCGGCATGAGCATCTGGGACGTGAAGG...GGCCACAGGGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR CCA 90 bp | TGGATGGCTGGCCCTGTGGCCTCAGCAGAAATTTTCTCCCTTGGGTGGCAGCCTGCTGGGAGCTCTGCTTaGGTACATCCAGCCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WMAGPVASAEIFSLGWQPAGSSA*VHPAGH Trigger: GTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGC...AGGCTGCCACCCAAGGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTGCCCACTTGAAGGAGACCATGGATGTGGTGGCCTTCAGCGTAGGGCCTTCCAGGCATGGCAGCTaGTGGGCTCCACCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFAHLKETMDVVAFSVGPSRHGS*WAPPGS Trigger: GCTTCCTGGTGGAGCCCATCAGCTGCCATGCCTGGA...AGGCCCTACGCTGAAGGCCACCACATCCATGGTCTCCTTCAAGTGGGCAAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGAGGCATTGCGGTCCGTaGCGCAGGTCACAATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RFLRASPEPTADWSSAELRHCGP*RRSQCG Trigger: ACCGCATTGTGACCTGCGGCACGGACCGCAATGCCT...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTGGTCATATCCTAGTCTTCTGCTGGAGGAAGGCTCCCAGGACTCCCCATCCACACATAGGCATTaGGGTCCGTGCCGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAWSYPSLLLEEGSQDSPSTHRH*GPCRRS Trigger: TGACCTGCGGCACGGACCGCAATGCCTATGTGTGGA...TGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | ATCTGGATGGCTGGCCCTGTGGCCTCAGCAGAAATTTTCTCCCTTGGGTGGCAGTGTAGTGCAGAACTGTaGGCACTTGGCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IWMAGPVASAEIFSLGWQCSAEL*ALGLAP Trigger: GGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACA...CTGCCACCCAAGGGAGAAAATTTCTGCTGAGGCCACAGGGCCAGCCATCCAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCGTGCTGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTTCAGGTCCTTCAAGGCTaGCTCCAGGCTCTTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KACCLAWVQKGGCGFCPLQVLQG*LQALHV Trigger: GACGTGAAGAGCCTGGAGTCAGCCTTGAAGGACCTG...AAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR GCA 90 bp | GTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGACCCCGTGTGGGCTTCCACGTaGGGCCCTTCAGCGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VYCILETFSKAALSLPDPVWAST*GPSAST Trigger: TGTGGACGCTGAAGGGCCGCACGTGGAAGCCCACAC...GGGGTCGGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGAATAACAGATGGAAATaGCCCGGGAGCCGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFLRASPEPTADWSSAELNNRWK*PGSRCP Trigger: TGGGCAGCGGCTCCCGGGTCATTTCCATCTGTTATT...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR GCA 90 bp | AGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACCAGGGGCCCAGTCGATaGCTGTCACCTGCCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQFPSCLFLCSSVLHPRNQGPSR*LSPARC Trigger: ACAACGGGCAGGTGACAGGCATCGACTGGGCCCCTG...GTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGTCTTCACGTCCCAGATaGTCATGCCGCCATCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RFLRASPEPTADWSSAELSSRPR*SCRHPC Trigger: GCATGGATGGCGGCATGAGCATCTGGGACGTGAAGA...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | CGAACTCAGAAATCTGCCTGCCTCTGTCTCCCGAGTGCTGGGATTAAAAGCGAGCCACGGTGTAGGGGCTaGCCGTTCTTCCACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTQKSACLCLPSAGIKSEPRCRG*PFFHLL Trigger: AAGGAGGTGGAAGAACGGCCAGCCCCTACACCGTGG...CTCGCTTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACGCTGGGAGCTCTGCTTaGGTACATCCAGCCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQFPSCLFLCSSVLHPRNAGSSA*VHPAGH Trigger: GTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGC...GTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| 3UTR CAA 72 bp | CTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTaGAAGGAGACCATGGATGTGGTGGCCTTCAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGCRRVGVAFAH*KETMDVVAFSV Trigger: TACGCTGAAGGCCACCACATCCATGGTCTCCTTCAAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCTGAGGGCCAGTCCTGAACCTACAGCAGACTGGAGCAGTGCTGAGCTGGCACCGAGATTTGGCTaGCACTGTTCTTGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFLRASPEPTADWSSAELAPRFG*HCSCAV Trigger: CACTGCACAAGAACAGTGTCAGCCAAATCTCGGTGC...CAGCTCAGCACTGCTCCAGTCTGCTGTAGGTTCAGGACTGGCCCTCAGAAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR GCA 90 bp | GTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGACCCCTCCACACATAGGCATTaGGGTCCGTGCCGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYCILETFSKAALSLPDPSTHRH*GPCRRS Trigger: TGACCTGCGGCACGGACCGCAATGCCTATGTGTGGA...GGGGTCGGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGTGTGGGCTTCCACGTaGGGCCCTTCAGCGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VAVYCILETFSKAALSLPVWAST*GPSAST Trigger: TGTGGACGCTGAAGGGCCGCACGTGGAAGCCCACAC...GGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| 3UTR CAA 72 bp | TGGGTGGGGTTCCAACACCAAATTAAAGCGTGCTGCTaGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WVGFQHQIKACC*AWVQKGGCGFC Trigger: GCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTTAATTTGGTGTTGGAACCCCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | GTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGACCCCAATAACAGATGGAAATaGCCCGGGAGCCGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYCILETFSKAALSLPDPNNRWK*PGSRCP Trigger: TGGGCAGCGGCTCCCGGGTCATTTCCATCTGTTATT...GGGGTCGGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | GTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCTGCCGCAGGTCACAATaGGGTTACTCTCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAVYCILETFSKAALSLPCRRSQ*GYSQGP Trigger: GGGCCCCTGAGAGTAACCGCATTGTGACCTGCGGCA...GGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAACCACGGTGTAGGGGCTaGCCGTTCTTCCACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILEPRCRG*PFFHLL Trigger: AAGGAGGTGGAAGAACGGCCAGCCCCTACACCGTGG...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCCCAGTAGCCCCTTACTTCAGACACAGGCAGCCCTCTCCACATTTGGTCATACAGTGCTGTCATaGCTGACCCAAGCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVPSSPLLQTQAALSTFGHTVLS*LTQATR Trigger: CCGAGTTGCTTGGGTCAGCCATGACAGCACTGTATG...ACCAAATGTGGAGAGGGCTGCCTGTGTCTGAAGTAAGGGGCTACTGGGAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACCGGGAAGCAGTCGTaGCCCGCTGCCACTAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILETGKQS*PAATRL Trigger: TAGTCTAGTGGCAGCGGGCCACGACTGCTTCCCGGT...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | TCATATCCTAGTCTTCTGCTGGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCCTGAGCACCGAGATTTaGCTGACACTGTTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYPSLLLEEGSQDSPQQSLSTEI*LTLFLC Trigger: GCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAG...GGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| 3UTR CAA 72 bp | AGTCCTTGGCACTGTGACAGGGAGGAAGCAGGCCTGTaGCTAGCCAGTGAGTTACTTGTACATTCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPWHCDREEAGL*LASELLVHSGP Trigger: TGGGCCTGAATGTACAAGTAACTCACTGGCTAGCAACAGGCCTGCTTCCTCCCTGTCACAGTGCCAAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCTCCAGGCATGGCAGCTaGTGGGCTCCACCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSFVAVYCILETFSKAASRHGS*WAPPGS Trigger: GCTTCCTGGTGGAGCCCATCAGCTGCCATGCCTGGA...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR TCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAACAGGTCCTTCAAGGCTaGCTCCAGGCTCTTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILEQVLQG*LQALHV Trigger: GACGTGAAGAGCCTGGAGTCAGCCTTGAAGGACCTG...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | AGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACTCTTCACGTCCCAGATaGTCATGCCGCCATCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RQFPSCLFLCSSVLHPRNSSRPR*SCRHPC Trigger: GCATGGATGGCGGCATGAGCATCTGGGACGTGAAGA...GTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAACGAACTTGTTCTCATTaGGGGCCCAGCGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILERTCSH*GPSAHS Trigger: GCTGTGTGCGCTGGGCCCCCAATGAGAACAAGTTCG...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAGCTGTCATGCCACGCTaGGAGCTCTGCTTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILEAVMPR*ELCLGT Trigger: TGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGC...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCTGCCGCAGGTCACAATaGGGTTACTCTCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSFVAVYCILETFSKAACRRSQ*GYSQGP Trigger: GGGCCCCTGAGAGTAACCGCATTGTGACCTGCGGCA...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAGAAGTCACAGGAGCCTaGTGCCAGGAGCACGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILEEVTGA*CQEHVV Trigger: AACAACGTGCTCCTGGCAGCAGGCTCCTGTGACTTC...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAGGTTGTTGGGGCAGATaGCGATCTGTGTACGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILEGCWGR*RSVYGP Trigger: AGGACCGTACACAGATCGCCATCTGCCCCAACAACC...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCTATCAGCTATCTCTATCTTTGCTCATGGCAGTACCAGCAGGGTTTAGGCACCGGGAAGCAGTCGTaGCCCGCTGCCACTAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSISYLYLCSWQYQQGLGTGKQS*PAATRL Trigger: TAGTCTAGTGGCAGCGGGCCACGACTGCTTCCCGGT...GCCTAAACCCTGCTGGTACTGCCATGAGCAAAGATAGAGATAGCTGATAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCTGGGAGCTCTGCTTaGGTACATCCAGCCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PASSFVAVYCILETFSKAAGSSA*VHPAGH Trigger: GTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGC...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | TCAGAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAAGCTGTCATGCCACGCTaGGAGCTCTGCTTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SEYTERGWNCRGLLGFPEAVMPR*ELCLGT Trigger: TGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGC...TTCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGCACCGAGATTTGGCTaGCACTGTTCTTGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAVYCILETFSKAALSLPAPRFG*HCSCAV Trigger: CACTGCACAAGAACAGTGTCAGCCAAATCTCGGTGC...GGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGTGATTTCTAGCTTACAGAAGGATGGTCCTCACTATAGGAAATCTTTGCAGGGGCCCAGTCGATaGCTGTCACCTGCCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWVISSLQKDGPHYRKSLQGPSR*LSPARC Trigger: ACAACGGGCAGGTGACAGGCATCGACTGGGCCCCTG...CAAAGATTTCCTATAGTGAGGACCATCCTTCTGTAAGCTAGAAATCACCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAACATACAGTGCTGTCATaGCTGACCCAAGCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IGSSPPASSFVAVYCILEHTVLS*LTQATR Trigger: CCGAGTTGCTTGGGTCAGCCATGACAGCACTGTATG...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | CAGATTCAAGGTTGGCTCCAAAATGAGGAAGGTGATAGCCTTTTAACAACGCCCGCTGTCATGCCACGCTaGGAGCTCTGCTTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QIQGWLQNEEGDSLLTTPAVMPR*ELCLGT Trigger: TGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGC...GGGCGTTGTTAAAAGGCTATCACCTTCCTCATTTTGGAGCCAACCTTGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAGCACCGAGATTTGGCTaGCACTGTTCTTGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRIHRERLELQGSARVSRAPRFG*HCSCAV Trigger: CACTGCACAAGAACAGTGTCAGCCAAATCTCGGTGC...TCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCATGTAGTGCAGAACTGTaGGCACTTGGCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PASSFVAVYCILETFSKACSAEL*ALGLAP Trigger: GGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACA...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCTATCAGCTATCTCTATCTTTGCTCATGGCAGTACCAGCAGGGTTTAGGCGAAGTCACAGGAGCCTaGTGCCAGGAGCACGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSISYLYLCSWQYQQGLGEVTGA*CQEHVV Trigger: AACAACGTGCTCCTGGCAGCAGGCTCCTGTGACTTC...GCCTAAACCCTGCTGGTACTGCCATGAGCAAAGATAGAGATAGCTGATAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | TTCTCTATCAGCTATCTCTATCTTTGCTCATGGCAGTACCAGCAGGGTTTAGGCGCACCTCATGGTTGTTaGGGCAGATGGCGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSISYLYLCSWQYQQGLGAPHGC*GRWRSV Trigger: CACAGATCGCCATCTGCCCCAACAACCATGAGGTGC...GCCTAAACCCTGCTGGTACTGCCATGAGCAAAGATAGAGATAGCTGATAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCGCACCTCATGGTTGTTaGGGCAGATGGCGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSFVAVYCILETFSKAAAPHGC*GRWRSV Trigger: CACAGATCGCCATCTGCCCCAACAACCATGAGGTGC...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| 3UTR CAA 72 bp | TCCATTTTTAGTGACCACTACCACATGCCTTTGGGCTaGACTCTGATTGATGGCCTCTGGAGAGGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIFSDHYHMPLG*TLIDGLWRGSC Trigger: GCAGGATCCTCTCCAGAGGCCATCAATCAGAGTCAAGCCCAAAGGCATGTGGTAGTGGTCACTAAAAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGTGATTTCTAGCTTACAGAAGGATGGTCCTCACTATAGGAAATCTTTGTGTAGTGCAGAACTGTaGGCACTTGGCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWVISSLQKDGPHYRKSLCSAEL*ALGLAP Trigger: GGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACA...CAAAGATTTCCTATAGTGAGGACCATCCTTCTGTAAGCTAGAAATCACCCAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGATTTCTAGCTTACAGAAGGATGGTCCTCACTATAGGAAATCTTTGCGAACTTGTTCTCATTaGGGGCCCAGCGCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWVISSLQKDGPHYRKSLRTCSH*GPSAHS Trigger: GCTGTGTGCGCTGGGCCCCCAATGAGAACAAGTTCG...CAAAGATTTCCTATAGTGAGGACCATCCTTCTGTAAGCTAGAAATCACCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | AGAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAAGTCTGAGCACCGAGATTTaGCTGACACTGTTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RIHRERLELQGSARVSRSLSTEI*LTLFLC Trigger: GCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAG...ACTTCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCGCACCTTGTTCCACTTaGCACCGCTCTTCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSFVAVYCILETFSKAAAPCST*HRSSHR Trigger: TCTATGAGAAGAGCGGTGCCAAGTGGAACAAGGTGC...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTGAGCACCGAGATTTaGCTGACACTGTTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSFVAVYCILETFSKAALSTEI*LTLFLC Trigger: GCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAG...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR TCA 90 bp | CAGATTCAAGGTTGGCTCCAAAATGAGGAAGGTGATAGCCTTTTAACAACGCCCGTTCTTCCACCTCCTTaGTATAGGCAGAGAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QIQGWLQNEEGDSLLTTPVLPPP*YRQRRS Trigger: GGATCTTCTCTGCCTATATCAAGGAGGTGGAAGAAC...GGGCGTTGTTAAAAGGCTATCACCTTCCTCATTTTGGAGCCAACCTTGAATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CCA 90 bp | GCCCACATTTTGAAGCAGTTCATGACCAGCATTGTGCTTTGGGTTTTTGTTTCTGCACCTTGTTCCACTTaGCACCGCTCTTCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHILKQFMTSIVLWVFVSAPCST*HRSSHR Trigger: TCTATGAGAAGAGCGGTGCCAAGTGGAACAAGGTGC...AGAAACAAAAACCCAAAGCACAATGCTGGTCATGAACTGCTTCAAAATGTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| 3UTR CAA 72 bp | CCATTTGTATCAGAATCACACCACTTAACAAGTAACTaGAAACAGATGGATCTCAAGTTCAAGGCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFVSESHHLTSN*KQMDLKFKAGP Trigger: AGGACCAGCCTTGAACTTGAGATCCATCTGTTTCAAGTTACTTGTTAAGTGGTGTGATTCTGATACAAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS GCA 90 bp | AGCTGGCCTTCTTGTCCAGGTTCTGGAAGCGCTCTCGGGCTGTCATaGCACGCTGGGAGCTCTGCTTGGGTACATCCAGCCGGCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: SWPSCPGSGSALGLS*HAGSSAWVHPAGHR Trigger: TCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAACCTGGACAAGAAGGCCAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
||
| CDS GCA 90 bp | AGGTTCTGGAAGCGCTCTCGGGCTGTCATGCCACGCTGGGAGCTCTaGTTGGGTACATCCAGCCGGCCACCGAAGCTCAATGTCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RFWKRSRAVMPRWEL*LGTSSRPPKLNVTA Trigger: TGCGGTGACATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
||
| CDS CCA 90 bp | TCTGGAAGCGCTCTCGGGCTGTCATGCCACGCTGGGAGCTCTGCTTaGGTACATCCAGCCGGCCACCGAAGCTCAATGTCACCGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGSALGLSCHAGSSA*VHPAGHRSSMSPQH Trigger: ATGCTGCGGTGACATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | CCTGCCTGGTCATATCCTAGTCTTCTGCTGGAGGAAGGCTCCCAGGACTCCCCACGCTGGGAGCTCTGCTaGGGTACATCCAGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAWSYPSLLLEEGSQDSPRWELC*GTSSRP Trigger: TGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCG...TGGGGAGTCCTGGGAGCCTTCCTCCAGCAGAAGACTAGGATATGACCAGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS TCA 90 bp | GTCCCAGATGCTCATGCCGCCATCCATGCCTGTAGTGCAGAACTGTaGGCACTTGGCCTTGCCCCCGCTGAGCACCGAGATTTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPDAHAAIHACSAEL*ALGLAPAEHRDLAD Trigger: GTCAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACAGGCATGGATGGCGGCATGAGCATCTGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CCA 90 bp | TTCTTGTCCAGGTTCTGGAAGCGCTCTCGGGCTGTCATGCCACGCTaGGAGCTCTGCTTGGGTACATCCAGCCGGCCACCGAAGCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSRFWKRSRAVMPR*ELCLGTSSRPPKLN Trigger: ATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAACCTGGACAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | AAAGCGTGCTGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTTTCCCCAAAGGGCATCTaGGAGCCCCACGGTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KACCLAWVQKGGCGFCPLSPKGI*EPHGVG Trigger: CCCTACACCGTGGGGCTCCAAGATGCCCTTTGGGGA...AAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGGAAGGCTCCCAGGACTCCCCACAGCAGTCCTTGGCACTGTGACAGGGGCTGAGCACCGAGATTaGGCTGACACTGTTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGRLPGLPTAVLGTVTGAEHRD*ADTVLV Trigger: CACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGC...CCCTGTCACAGTGCCAAGGACTGCTGTGGGGAGTCCTGGGAGCCTTCCTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| CDS-3UTR CAA 90 bp | GCTTTTGCCCACTTGAAGGAGACCATGGATGTGGTGGCCTTCAGCGTAGGGCCTCAGAACTGTGAGCACTaGGCCTTGCCCCCGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFAHLKETMDVVAFSVGPQNCEH*ALPPLS Trigger: GCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTG...AGGCCCTACGCTGAAGGCCACCACATCCATGGTCTCCTTCAAGTGGGCAAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTGCTGCTTGGCTTGGGTGCAGAAGGGTGGGTGTGGCTTTTGCCCACTTCAGCGGGCAGCTCGATaGATCCGGAGGATGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KACCLAWVQKGGCGFCPLQRAAR*IRRMTS Trigger: ACTGGTCATCCTCCGGATCAATCGAGCTGCCCGCTG...AAGTGGGCAAAAGCCACACCCACCCTTCTGCACCCAAGCCAAGCAGCACGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | GGACGTAAGGGTCTGGATGTCTCAGGGTCAGATATGGGTGTGGCTGCCAGAGACGCGAACTTGTTCTCATaGGGGGCCCAGCGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: GRKGLDVSGSDMGVAARDANLFS*GAQRTQ Trigger: CTGTGTGCGCTGGGCCCCCAATGAGAACAAGTTCGC...GTCTCTGGCAGCCACACCCATATCTGACCCTGAGACATCCAGACCCTTACGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
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| CDS-3UTR CAA 90 bp | GCTTGTGGGTGGGCCACTCAGTTGGGCACAGCAGGAACATCTGGATGGCTGGCCGCTGAGCACCGAGATTaGGCTGACACTGTTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ACGWATQLGTAGTSGWLAAEHRD*ADTVLV Trigger: CACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGC...GGCCAGCCATCCAGATGTTCCTGCTGTGCCCAACTGAGTGGCCCACCCACAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| CDS-3UTR CAA 90 bp | GTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGACCCCCCTGTCACCTGCCCGTaGTGCTCCTTCAGCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VYCILETFSKAALSLPDPPVTCP*CSFSSC Trigger: GCACGAGCTGAAGGAGCACAACGGGCAGGTGACAGG...GGGGTCGGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | GTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGACCCCCTGCCCACGGCGAACTaGTTCTCATTGGGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VYCILETFSKAALSLPDPLPTAN*FSLGAQ Trigger: CTGGGCCCCCAATGAGAACAAGTTCGCCGTGGGCAG...GGGGTCGGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACCTGCCCACGGCGAACTaGTTCTCATTGGGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQFPSCLFLCSSVLHPRNLPTAN*FSLGAQ Trigger: CTGGGCCCCCAATGAGAACAAGTTCGCCGTGGGCAG...GTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAGCAGAAATTTTCTCCCTTGGGTGGCAGCCTGGATGCTTGGCTCTGTTCAGAGCTGGCCTTCTaGTCCAGGTTCTGGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WPQQKFSPLGGSLDAWLCSELAF*SRFWKR Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCCAGCTCTGA...ACAGAGCCAAGCATCCAGGCTGCCACCCAAGGGAGAAAATTTCTGCTGAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAATGTGAGCACTTGGCCTaGCCCCCGCTGAGCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: IGSSPPASSFVAVYCILECEHLA*PPLSTE Trigger: CTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACA...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | GTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCTGTGAGCACTTGGCCTaGCCCCCGCTGAGCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAVYCILETFSKAALSLPCEHLA*PPLSTE Trigger: CTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACA...GGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACCAGAACTGTGAGCACTaGGCCTTGCCCCCGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQFPSCLFLCSSVLHPRNQNCEH*ALPPLS Trigger: GCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTG...GTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACGCGAACTTGTTCTCATaGGGGGCCCAGCGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RQFPSCLFLCSSVLHPRNANLFS*GAQRTQ Trigger: CTGTGTGCGCTGGGCCCCCAATGAGAACAAGTTCGC...GTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | TCAGAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAACGCTGGGAGCTCTGCTaGGGTACATCCAGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEYTERGWNCRGLLGFPERWELC*GTSSRP Trigger: TGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCG...TTCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR CAA 90 bp | GAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAAGTTTGTGAGCACTTGGCCTaGCCCCCGCTGAGCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EYTERGWNCRGLLGFPEVCEHLA*PPLSTE Trigger: CTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACA...AACTTCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS TCA 90 bp | TGTCCTGGAGTCTCCACATTGCATCTGCCATGTTCAGGGACATTCTaGTCTTGCATCACGTATGCACCCGTACCCCAGCCCAGGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CPGVSTLHLPCSGTF*SCITYAPVPQPRFL Trigger: GAGGAACCTGGGCTGGGGTACGGGTGCATACGTGATGCAAGATCAGAATGTCCCTGAACATGGCAGATGCAATGTGGAGACTCCAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
||
| CDS-3UTR CAA 90 bp | CGAACTCAGAAATCTGCCTGCCTCTGTCTCCCGAGTGCTGGGATTAAAAGCGAGTGCACCTCATGGTTGTaGGGGCAGATGGCGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RTQKSACLCLPSAGIKSECTSWL*GQMAIC Trigger: ACAGATCGCCATCTGCCCCAACAACCATGAGGTGCA...CTCGCTTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | AGAATACACAGAGAGAGGTTGGAATTGCAGGGGTCTGCTAGGGTTTCCAGAAGTCAGAACTGTGAGCACTaGGCCTTGCCCCCGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RIHRERLELQGSARVSRSQNCEH*ALPPLS Trigger: GCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTG...ACTTCTGGAAACCCTAGCAGACCCCTGCAATTCCAACCTCTCTCTGTGTATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
||
| CDS-3UTR CAA 90 bp | CAGATTCAAGGTTGGCTCCAAAATGAGGAAGGTGATAGCCTTTTAACAACGCCCCCTGTCACCTGCCCGTaGTGCTCCTTCAGCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QIQGWLQNEEGDSLLTTPPVTCP*CSFSSC Trigger: GCACGAGCTGAAGGAGCACAACGGGCAGGTGACAGG...GGGCGTTGTTAAAAGGCTATCACCTTCCTCATTTTGGAGCCAACCTTGAATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | CGAACTCAGAAATCTGCCTGCCTCTGTCTCCCGAGTGCTGGGATTAAAAGCGAGGAGAAGATCCTGCACTaGAAGTCACAGGAGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTQKSACLCLPSAGIKSEEKILH*KSQEPA Trigger: AGCAGGCTCCTGTGACTTCAAGTGCAGGATCTTCTC...CTCGCTTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAATCTCAGAGGCCAGGGTaGCCACGGCCATCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IGSSPPASSFVAVYCILESQRPG*PRPSSC Trigger: ACAAGAAGATGGCCGTGGCAACCCTGGCCTCTGAGA...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085679.13 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCACGCTGGGAGCTCTGCTaGGGTACATCCAGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PASSFVAVYCILETFSKARWELC*GTSSRP Trigger: TGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCG...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAATCAGAGCTGGCCTTCTaGTCCAGGTTCTGGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: IGSSPPASSFVAVYCILESELAF*SRFWKR Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCCAGCTCTGA...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCATGTGCACCTCATGGTaGTTGGGGCAGATGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: VAVYCILETFSKAALSLPMCTSW*LGQMAI Trigger: GATCGCCATCTGCCCCAACAACCATGAGGTGCACAT...GGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCAGCGGGCAGCTCGATaGATCCGGAGGATGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSFVAVYCILETFSKAAQRAAR*IRRMTS Trigger: ACTGGTCATCCTCCGGATCAATCGAGCTGCCCGCTG...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCATCCCCAAAGGGCATCTaGGAGCCCCACGGTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PASSFVAVYCILETFSKASPKGI*EPHGVG Trigger: CCCTACACCGTGGGGCTCCAAGATGCCCTTTGGGGA...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCTTCAGCTCGTGCACCTaGTTCCACTTGGCACCGCTC | + |
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Preference number: 5 (lower is better) Translates to: ASSFVAVYCILETFSKAAFSSCT*FHLAPL Trigger: GAGCGGTGCCAAGTGGAACAAGGTGCACGAGCTGAA...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGTTCCCCTCCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAGAGAAGATCCTGCACTaGAAGTCACAGGAGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: IGSSPPASSFVAVYCILEEKILH*KSQEPA Trigger: AGCAGGCTCCTGTGACTTCAAGTGCAGGATCTTCTC...TTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | GCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCTCAGAGCTGGCCTTCTaGTCCAGGTTCTGGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: ASSFVAVYCILETFSKAASELAF*SRFWKR Trigger: GCGCTTCCAGAACCTGGACAAGAAGGCCAGCTCTGA...GGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | GTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAGCCCTTAGCCTCCCCGCTGAGCACCGAGATTaGGCTGACACTGTTCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: VAVYCILETFSKAALSLPAEHRD*ADTVLV Trigger: CACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGC...GGGGAGGCTAAGGGCTGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS CCA 90 bp | TATGTGTTTGCACACCCACCAGTGAGGCTCAGAAGACAGATGTCCTaGAGTCTCCACATTGCATCTGCCATGTTCAGGGACATTCTGATC | + |
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Preference number: 5 (lower is better) Translates to: YVFAHPPVRLRRQMS*SLHIASAMFRDILI Trigger: GATCAGAATGTCCCTGAACATGGCAGATGCAATGTGGAGACTCCAGGACATCTGTCTTCTGAGCCTCACTGGTGGGTGTGCAAACACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCATGCACCTCATGGTTGTaGGGGCAGATGGCGATCTGT | + |
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Preference number: 5 (lower is better) Translates to: PASSFVAVYCILETFSKACTSWL*GQMAIC Trigger: ACAGATCGCCATCTGCCCCAACAACCATGAGGTGCA...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCTTCCTTTGTAGCAGTGTACTGCATCCTAGAAACATTTAGCAAAGCAATGTGCACCTCATGGTaGTTGGGGCAGATGGCGATC | + |
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Preference number: 5 (lower is better) Translates to: PASSFVAVYCILETFSKAMCTSW*LGQMAI Trigger: GATCGCCATCTGCCCCAACAACCATGAGGTGCACAT...TGCTTTGCTAAATGTTTCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS CCA 72 bp | AGGTTCTGGAAGCGCTCTCGGGCTGTCATGCCACGCTaGGAGCTCTGCTTGGGTACATCCAGCCGGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: RFWKRSRAVMPR*ELCLGTSSRPP Trigger: CGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CAA 72 bp | ATGGAAATGACCCGGGAGCCGCTGCCCACGGCGAACTaGTTCTCATTGGGGGCCCAGCGCACACAGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: MEMTREPLPTAN*FSLGAQRTQRA Trigger: TGCCCGCTGTGTGCGCTGGGCCCCCAATGAGAACAAGTTCGCCGTGGGCAGCGGCTCCCGGGTCATTTCCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000136074.2 ENSMUST00000196111.5 |
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| CDS CAA 72 bp | TCATTGGGGGCCCAGCGCACACAGCGGGCAGCTCGATaGATCCGGAGGATGACCAGTGTGGGCTTCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: SLGAQRTQRAAR*IRRMTSVGFHV Trigger: CACGTGGAAGCCCACACTGGTCATCCTCCGGATCAATCGAGCTGCCCGCTGTGTGCGCTGGGCCCCCAATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS CAA 90 bp | AACTTGTTCTCATTGGGGGCCCAGCGCACACAGCGGGCAGCTCGATaGATCCGGAGGATGACCAGTGTGGGCTTCCACGTGCGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: NLFSLGAQRTQRAAR*IRRMTSVGFHVRPF Trigger: GAAGGGCCGCACGTGGAAGCCCACACTGGTCATCCTCCGGATCAATCGAGCTGCCCGCTGTGTGCGCTGGGCCCCCAATGAGAACAAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085679.13 ENSMUST00000196111.5 |
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| CDS CAA 90 bp | TTCTGGAAGCGCTCTCGGGCTGTCATGCCACGCTGGGAGCTCTGCTaGGGTACATCCAGCCGGCCACCGAAGCTCAATGTCACCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FWKRSRAVMPRWELC*GTSSRPPKLNVTAA Trigger: TGCTGCGGTGACATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CCA 72 bp | GCTCTCGGGCTGTCATGCCACGCTGGGAGCTCTGCTTaGGTACATCCAGCCGGCCACCGAAGCTCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: ALGLSCHAGSSA*VHPAGHRSSMS Trigger: TGACATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CAA 72 bp | CCCCCGCTGAGCACCGAGATTTGGCTGACACTGTTCTaGTGCAGTGAATCCAGGCCGGCCCCAGTGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PPLSTEIWLTLF*CSESRPAPVAA Trigger: TGCAGCCACTGGGGCCGGCCTGGATTCACTGCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS TCA 72 bp | GCTCATGCCGCCATCCATGCCTGTAGTGCAGAACTGTaGGCACTTGGCCTTGCCCCCGCTGAGCACCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: AHAAIHACSAEL*ALGLAPAEHRD Trigger: ATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACAGGCATGGATGGCGGCATGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS GCA 72 bp | TCTTGTCCAGGTTCTGGAAGCGCTCTCGGGCTGTCATaGCACGCTGGGAGCTCTGCTTGGGTACATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SCPGSGSALGLS*HAGSSAWVHPA Trigger: GGCTGGATGTACCCAAGCAGAGCTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAACCTGGACAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CAA 72 bp | CCGCCATCCATGCCTGTAGTGCAGAACTGTGAGCACTaGGCCTTGCCCCCGCTGAGCACCGAGATTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PPSMPVVQNCEH*ALPPLSTEIWL Trigger: CAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACAGGCATGGATGGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CAA 90 bp | ATGCCGCCATCCATGCCTGTAGTGCAGAACTGTGAGCACTTGGCCTaGCCCCCGCTGAGCACCGAGATTTGGCTGACACTGTTCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: MPPSMPVVQNCEHLA*PPLSTEIWLTLFLC Trigger: GCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACAGGCATGGATGGCGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CAA 90 bp | ATGCTCATGCCGCCATCCATGCCTGTAGTGCAGAACTGTGAGCACTaGGCCTTGCCCCCGCTGAGCACCGAGATTTGGCTGACACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: MLMPPSMPVVQNCEH*ALPPLSTEIWLTLF Trigger: GAACAGTGTCAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACAGGCATGGATGGCGGCATGAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CCA 72 bp | CCCAAAGGGCATCTTGGAGCCCCACGGTGTAGGGGCTaGCCGTTCTTCCACCTCCTTGATATAGGCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PKGHLGAPRCRG*PFFHLLDIGRE Trigger: TTCTCTGCCTATATCAAGGAGGTGGAAGAACGGCCAGCCCCTACACCGTGGGGCTCCAAGATGCCCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000136074.2 ENSMUST00000196111.5 |
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| CDS CAA 72 bp | TCCATGCCTGTAGTGCAGAACTGTGAGCACTTGGCCTaGCCCCCGCTGAGCACCGAGATTTGGCTGACACTG | + |
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Preference number: 6 (lower is better) Translates to: SMPVVQNCEHLA*PPLSTEIWLTL Trigger: CAGTGTCAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCACTACAGGCATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085679.13 ENSMUST00000138922.2 ENSMUST00000196111.5 |
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| CDS CAA 90 bp | TGGAGTCTCCACATTGCATCTGCCATGTTCAGGGACATTCTGATCTaGCATCACGTATGCACCCGTACCCCAGCCCAGGTTCCTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: WSLHIASAMFRDILI*HHVCTRTPAQVPPP Trigger: GGGTGGAGGAACCTGGGCTGGGGTACGGGTGCATACGTGATGCAAGATCAGAATGTCCCTGAACATGGCAGATGCAATGTGGAGACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
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| CDS CAA 90 bp | GTCTCAGAGGCCAGGGTTGCCACGCTGAAAGAGAGGGCCATCTTCTaGTCAGCATCTACCAGGCATACAGTGCTGTCATGGCTGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: VSEARVATLKERAIF*SASTRHTVLSWLTQ Trigger: TTGGGTCAGCCATGACAGCACTGTATGCCTGGTAGATGCTGACAAGAAGATGGCCCTCTCTTTCAGCGTGGCAACCCTGGCCTCTGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196111.5 |
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| CDS CCA 72 bp | GCACACCCACCAGTGAGGCTCAGAAGACAGATGTCCTaGAGTCTCCACATTGCATCTGCCATGTTCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AHPPVRLRRQMS*SLHIASAMFRD Trigger: GTCCCTGAACATGGCAGATGCAATGTGGAGACTCCAGGACATCTGTCTTCTGAGCCTCACTGGTGGGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
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| CDS TCA 72 bp | GTCTCCACATTGCATCTGCCATGTTCAGGGACATTCTaGTCTTGCATCACGTATGCACCCGTACCCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSTLHLPCSGTF*SCITYAPVPQP Trigger: GGGCTGGGGTACGGGTGCATACGTGATGCAAGATCAGAATGTCCCTGAACATGGCAGATGCAATGTGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
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| CDS TCA 72 bp | GTCTGTGTGCACAGAATGTTTCTGAGGCCTCGGTCTTaGAGTCCTTCACGTCCCAGATGCTCATGCCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VCVHRMFLRPRS*SPSRPRCSCRH Trigger: ATGGCGGCATGAGCATCTGGGACGTGAAGGACTTCAAGACCGAGGCCTCAGAAACATTCTGTGCACACAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| CDS CAA 72 bp | AGTCTGTGTGCACAGAATGTTTCTGAGGCCTCGGTCTaGAAGTCCTTCACGTCCCAGATGCTCATGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLCAQNVSEASV*KSFTSQMLMPP Trigger: TGGCGGCATGAGCATCTGGGACGTGAAGGACTTCAAGACCGAGGCCTCAGAAACATTCTGTGCACACAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138922.2 |
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| CDS GCA 72 bp | GAGGCTCAGAAGACAGATGTCCTGGAGTCTCCACATTaGATCTGCCATGTTCAGGGACATTCTGATCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: EAQKTDVLESPH*ICHVQGHSDLA Trigger: TGCAAGATCAGAATGTCCCTGAACATGGCAGATGCAATGTGGAGACTCCAGGACATCTGTCTTCTGAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
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| CDS GCA 72 bp | CAGAAGACAGATGTCCTGGAGTCTCCACATTGCATCTaGCATGTTCAGGGACATTCTGATCTTGCATCACGT | + |
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Preference number: 6 (lower is better) Translates to: QKTDVLESPHCI*HVQGHSDLASR Trigger: ACGTGATGCAAGATCAGAATGTCCCTGAACATGGCAGATGCAATGTGGAGACTCCAGGACATCTGTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136074.2 |
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