Pregenerated sensors for ARNTL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040187Ensembl transcript IDs: ENSMUST00000080530.6, ENSMUST00000111636.8, ENSMUST00000111638.8, ENSMUST00000111639.8, ENSMUST00000129788.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCGGTCTCACGTTGATCTTGCCACTCTTTTGAGGGACAATGTATaGATGCAACCGTCCCATAGCCACAAGGCAGGTAAGAGGACCGCT | + |
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Preference number: 1 (lower is better) Translates to: SRSHVDLATLLRDNV*MQPSHSHKAGKRTA Trigger: AGCGGTCCTCTTACCTGCCTTGTGGCTATGGGACGGTTGCATCCATACATTGTCCCTCAAAAGAGTGGCAAGATCAACGTGAGACCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR GCA 90 bp | GACCTCTGTTTCAGAAGGGCTCACTGCAAAAGGCTCCCTAGTGGATaGAGGCCCATAGGCATTCCCACCATTTACACTGCAGTCATCTCT | + |
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Preference number: 1 (lower is better) Translates to: DLCFRRAHCKRLPSG*RPIGIPTIYTAVIS Trigger: AGAGATGACTGCAGTGTAAATGGTGGGAATGCCTATGGGCCTGCATCCACTAGGGAGCCTTTTGCAGTGAGCCCTTCTGAAACAGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR TCA 90 bp | CGAGTTATGAACTCAGCCGGTCTCACGTTGATCTTGCCACTCTTTTaGGGGACAATGTATGGATGCAACCGTCCCATAGCCACAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RVMNSAGLTLILPLF*GTMYGCNRPIATRQ Trigger: CTGCCTTGTGGCTATGGGACGGTTGCATCCATACATTGTCCCTCAAAAGAGTGGCAAGATCAACGTGAGACCGGCTGAGTTCATAACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR GCA 90 bp | AATTGCCGTTGCCCTTTGGTCAACATAGACGAATTTCCCGTTCATTaGGAAGCGAGTTATGAACTCAGCCGGTCTCACGTTGATCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: NCRCPLVNIDEFPVH*EASYELSRSHVDLA Trigger: GGCAAGATCAACGTGAGACCGGCTGAGTTCATAACTCGCTTCGCAATGAACGGGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CCA 90 bp | GTATTTAAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTaGGAGGAAGAGGCAGGCGGATCTTTGAGTTCAAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VFKLGIVIYGFNLNT*EEEAGGSLSSRPAW Trigger: CCAGGCTGGCCTTGAACTCAAAGATCCGCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTTAAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR GCA 90 bp | TCTCCATGCCAACAACATTCAGAGGCCAGCTTCTCAAGTATCCAGTaGAATGGACGGTGTGGAATTTTCTATGGTCTTTCTTCTTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: SPCQQHSEASFSSIQ*NGRCGIFYGLSSLS Trigger: GCTCAAAGAAGAAAGACCATAGAAAATTCCACACCGTCCATTGCACTGGATACTTGAGAAGCTGGCCTCTGAATGTTGTTGGCATGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CCA 90 bp | TTCTCACTGTGTAAAGAGGGATTGATAAACTTGGCTGTTTCTCTTTaGAGGAGCATGTGTGACTCCGCACATCCCAGTGAGAATAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: FSLCKEGLINLAVSL*RSMCDSAHPSENKG Trigger: CCCTTTATTCTCACTGGGATGTGCGGAGTCACACATGCTCCTCCAAAGAGAAACAGCCAAGTTTATCAATCCCTCTTTACACAGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR CCA 90 bp | ATGCCAACAACATTCAGAGGCCAGCTTCTCAAGTATCCAGTGCAATaGACGGTGTGGAATTTTCTATGGTCTTTCTTCTTTGAGCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: MPTTFRGQLLKYPVQ*TVWNFLWSFFFEQD Trigger: GTCCTGCTCAAAGAAGAAAGACCATAGAAAATTCCACACCGTCCATTGCACTGGATACTTGAGAAGCTGGCCTCTGAATGTTGTTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR TCA 90 bp | ACTCTTCAGAGTCACGAAGGCACCATCCTTCACTCTGAATTTGTATaGGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: TLQSHEGTILHSEFV*VCKYFLLTLQNCFV Trigger: CACAAAGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTTCGTGACTCTGAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CAA 90 bp | ATACTCCCAGCACCAAGGACGGTCCCCGTGGATACACCGGGCACATaGATGCAGGATTGTCTAAATGAGTCTTCGGAGGACTGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ILPAPRTVPVDTPGT*MQDCLNESSEDWLL Trigger: CAGCAGCCAGTCCTCCGAAGACTCATTTAGACAATCCTGCATCAATGTGCCCGGTGTATCCACGGGGACCGTCCTTGGTGCTGGGAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR GCA 90 bp | TTGATGCAGGATTGTCTAAATGAGTCTTCGGAGGACTGGCTGCTGCCGCCGCAAACAGCCTGGTCTCACTaGGCCCCAAAACCAATGTGT | + |
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Preference number: 2 (lower is better) Translates to: LMQDCLNESSEDWLLPPQTAWSH*APKPMC Trigger: ACACATTGGTTTTGGGGCGCAGTGAGACCAGGCTGT...TTGCGGCGGCAGCAGCCAGTCCTCCGAAGACTCATTTAGACAATCCTGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTGAGCTGCATTCCTGGGCCATTTAATCTCAACACTTaGGAGGAAGAGGCAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: PRLGARQGLCHLSCIPGPFNLNT*EEEAGG Trigger: TCCGCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAA...TGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR CAA 90 bp | GACCCCCAAGCTGCCTTCTCACTGTGTAAAGAGGGATTGATAAACTaGGCTGTTTCTCTTTGGAGGAGCATGTGTGACTCCGCACATCCC | + |
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Preference number: 2 (lower is better) Translates to: DPQAAFSLCKEGLIN*AVSLWRSMCDSAHP Trigger: GGGATGTGCGGAGTCACACATGCTCCTCCAAAGAGAAACAGCCAAGTTTATCAATCCCTCTTTACACAGTGAGAAGGCAGCTTGGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR CAA 90 bp | GCGAGTTATGAACTCAGCCGGTCTCACGTTGATCTTGCCACTCTTTaGAGGGACAATGTATGGATGCAACCGTCCCATAGCCACAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASYELSRSHVDLATL*RDNVWMQPSHSHKA Trigger: TGCCTTGTGGCTATGGGACGGTTGCATCCATACATTGTCCCTCAAAAGAGTGGCAAGATCAACGTGAGACCGGCTGAGTTCATAACTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCAAAAGGCTCCCTAGTGGATGCAGGCCCATAGGCATTCCCACCATTTACCCAAAACCAATGTGTTaGCAGACACAATGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: HCKRLPSGCRPIGIPTIYPKPMC*QTQCTP Trigger: TGGAGTACATTGTGTCTGTCAACACATTGGTTTTGG...GTAAATGGTGGGAATGCCTATGGGCCTGCATCCACTAGGGAGCCTTTTGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CAA 90 bp | CTTCTGGGGATGAAGAGTGTAATCTCTGTAAACTCAGAACCTCATTaGCAATATCTGTTCCAATACTCCCAGCACCAAGGACGGTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: LLGMKSVISVNSEPH*QYLFQYSQHQGRSP Trigger: CGGGGACCGTCCTTGGTGCTGGGAGTATTGGAACAGATATTGCAAATGAGGTTCTGAGTTTACAGAGATTACACTCTTCATCCCCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAGGTATCCTAAAATTGCCGTTGCCCTTTGGTCAACATAGACGAATTTCCCCGACTCTTTCTCCATaGCAACAACATTCAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EAGILKLPLPFGQHRRISPTLSP*QQHSEA Trigger: GGCCTCTGAATGTTGTTGGCATGGAGAAAGAGTCGG...GGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTATGCTGTCACTGTCACACAGGACATCAAAACCCAGCTGGGCACTGTCTCCCACCATTTACACTaGAGTCATCTCTCACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: HVYAVTVTQDIKTQLGTVSHHLH*SHLSLL Trigger: AAGAAGTGAGAGATGACTGCAGTGTAAATGGTGGGA...GACAGTGCCCAGCTGGGTTTTGATGTCCTGTGTGACAGTGACAGCATAGACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAACCAATGTGTTGACAGACACAATGTACTCCAGCTCTTTGGTCCAAGGGATCTTGCCACTCTTTTaGGGGACAATGTATGGATGC | + |
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Preference number: 2 (lower is better) Translates to: PKTNVLTDTMYSSSLVQGILPLF*GTMYGC Trigger: GCATCCATACATTGTCCCTCAAAAGAGTGGCAAGAT...CCCTTGGACCAAAGAGCTGGAGTACATTGTGTCTGTCAACACATTGGTTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CAA 90 bp | ATGAAGTTCCCAAAAGTTCCTGAGGCAGGTATCCTAAAATTGCCGTaGCCCTTTGGTCAACATAGACGAATTTCCCGTTCATTGCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: MKFPKVPEAGILKLP*PFGQHRRISRSLRS Trigger: GCTTCGCAATGAACGGGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTCAGGAACTTTTGGGAACTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CAA 90 bp | TCCCACCATTTACACTGCAGTCATCTCTCACTTCTTCTGAAGGGCTaGCATCTTCTGGGGATGAAGAGTGTAATCTCTGTAAACTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SHHLHCSHLSLLLKG*HLLGMKSVISVNSE Trigger: TTCTGAGTTTACAGAGATTACACTCTTCATCCCCAGAAGATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGTAAATGGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAATGTGTTGACAGACACAATGTACTCCAGCTCTTTGGTCCAAGGGTTTGTGCTTACTCTGCAGAACTaGTTTGTGCTTGTCAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: TNVLTDTMYSSSLVQGFVLTLQN*FVLVSQ Trigger: TTGACTGACAAGCACAAAGCAGTTCTGCAGAGTAAG...CACAAACCCTTGGACCAAAGAGCTGGAGTACATTGTGTCTGTCAACACATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGCCTGAGCTGCATTCCTaGGCCAGAATTTTAAATCAT | + |
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Preference number: 2 (lower is better) Translates to: LTFNLLCAKAGFEFMILLPELHS*ARILNH Trigger: ATGATTTAAAATTCTGGCCCAGGAATGCAGCTCAGG...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAATGTGTTGACAGACACAATGTACTCCAGCTCTTTGGTCCAAGGGTTTGTGGTGCAATGGACGGTGTaGAATTTTCTATGGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TNVLTDTMYSSSLVQGFVVQWTV*NFLWSF Trigger: GAAAGACCATAGAAAATTCCACACCGTCCATTGCAC...CACAAACCCTTGGACCAAAGAGCTGGAGTACATTGTGTCTGTCAACACATTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGGGATGAAGAGTGTAATCTCTGTAAACTCAGAACCTCATTTGCAATATGAAGCAAAGACAGCCTaGTCTCACTGCGCCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LLGMKSVISVNSEPHLQYEAKTA*SHCAPK Trigger: TTTTGGGGCGCAGTGAGACCAGGCTGTCTTTGCTTC...ATATTGCAAATGAGGTTCTGAGTTTACAGAGATTACACTCTTCATCCCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CAA 90 bp | CATAACATGAAGTTCCCAAAAGTTCCTGAGGCAGGTATCCTAAAATaGCCGTTGCCCTTTGGTCAACATAGACGAATTTCCCGTTCATTG | + |
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Preference number: 2 (lower is better) Translates to: HNMKFPKVPEAGILK*PLPFGQHRRISRSL Trigger: CAATGAACGGGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTCAGGAACTTTTGGGAACTTCATGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CAA 90 bp | CACTCACTCTTCAGAGTCACGAAGGCACCATCCTTCACTCTGAATTaGTATGAGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: HSLFRVTKAPSFTLN*YESVSIFSLLCRTA Trigger: AGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTTCGTGACTCTGAAGAGTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR TCA 90 bp | TATGAGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCTTTGTGCTTGTCAATGGTCTTTCTTCTTTaGGCAGGACGAGCATGGCTG | + |
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Preference number: 2 (lower is better) Translates to: YESVSIFSLLCRTALCLSMVFLL*AGRAWL Trigger: CAGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCAT...TGACAAGCACAAAGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR GCA 90 bp | TATGAGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCTTTGTGCTTGTCATTCTCAAGTATCCAGTaGAATGGACGGTGTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: YESVSIFSLLCRTALCLSFSSIQ*NGRCGI Trigger: AATTCCACACCGTCCATTGCACTGGATACTTGAGAA...TGACAAGCACAAAGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCACCATCCTTCACTCTGAATTTGTATGAGTCTGTAAGTATTTTCTCCTTAGTTCCCAAAAGTTCCTaGGGCAGGTATCCTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: KAPSFTLNLYESVSIFSLVPKSS*GRYPKI Trigger: AATTTTAGGATACCTGCCTCAGGAACTTTTGGGAAC...TAAGGAGAAAATACTTACAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGAAAGCCCTAACAATATaGTTGGTAGCAGTTTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: WARILNHPNSYTPFELPLKALTI*LVAVFG Trigger: ACCAAAAACTGCTACCAACCATATTGTTAGGGCTTT...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCATTGCCTCATGATTTTAGGGACTGTATTTAAGCTGGGAATTGTGATATATAATGTACCAATACAGTaGTCAAGAGTACAGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SHCLMILGTVFKLGIVIYNVPIQ*SRVQCF Trigger: AAAACACTGTACTCTTGAGCACTGTATTGGTACATT...ATATATCACAATTCCCAGCTTAAATACAGTCCCTAAAATCATGAGGCAATGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR CCA 72 bp | GACATCAAAACCCAGCTGGGCACTGTCACCGGGAAGTaGTCCGTGAGGGTGGGCGGGTTCAGTGCTCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: DIKTQLGTVTGK*SVRVGGFSALV Trigger: CACCAGAGCACTGAACCCGCCCACCCTCACGGACCACTTCCCGGTGACAGTGCCCAGCTGGGTTTTGATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAACCCAGCTGGGCACTGTCACCGGGAAGTGGTCCGTGAGGGTGGGCGGGTTTATGGTCTTTCTTCTTaGAGCAGGACGAGCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: QNPAGHCHREVVREGGRVYGLSS*SRTSMA Trigger: AGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCATA...AACCCGCCCACCCTCACGGACCACTTCCCGGTGACAGTGCCCAGCTGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAACCCAGCTGGGCACTGTCACCGGGAAGTGGTCCGTGAGGGTGGGCGGGTTAGAACTGCTTTGTGCTaGTCAGTCAAACTACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: QNPAGHCHREVVREGGRVRTALC*SVKLLW Trigger: CCACAGTAGTTTGACTGACAAGCACAAAGCAGTTCT...AACCCGCCCACCCTCACGGACCACTTCCCGGTGACAGTGCCCAGCTGGGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR GCA 72 bp | GACCGCTGTCCTTCCCACCACCCGACTCTTTCTCCATaGCAACAACATTCAGAGGCCAGCTTCTCAAGTATC | + |
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Preference number: 3 (lower is better) Translates to: DRCPSHHPTLSP*QQHSEASFSSI Trigger: GATACTTGAGAAGCTGGCCTCTGAATGTTGTTGGCATGGAGAAAGAGTCGGGTGGTGGGAAGGACAGCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR GCA 72 bp | TTCAGAAGGGCTCACTGCAAAAGGCTCCCTAGTGGATaGAGGCCCATAGGCATTCCCACCATTTACACTGCA | + |
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Preference number: 3 (lower is better) Translates to: FRRAHCKRLPSG*RPIGIPTIYTA Trigger: TGCAGTGTAAATGGTGGGAATGCCTATGGGCCTGCATCCACTAGGGAGCCTTTTGCAGTGAGCCCTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR TCA 72 bp | AACTCAGCCGGTCTCACGTTGATCTTGCCACTCTTTTaGGGGACAATGTATGGATGCAACCGTCCCATAGCC | + |
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Preference number: 3 (lower is better) Translates to: NSAGLTLILPLF*GTMYGCNRPIA Trigger: GGCTATGGGACGGTTGCATCCATACATTGTCCCTCAAAAGAGTGGCAAGATCAACGTGAGACCGGCTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR TCA 72 bp | ACAGCCTGGTCTCACTGCGCCCCAAAACCAATGTGTTaGCAGACACAATGTACTCCAGCTCTTTGGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: TAWSHCAPKPMC*QTQCTPALWSK Trigger: CTTGGACCAAAGAGCTGGAGTACATTGTGTCTGTCAACACATTGGTTTTGGGGCGCAGTGAGACCAGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CAA 90 bp | CATGTCTATGCTGTCACTGTCACACAGGACATCAAAACCCAGCTGGGCACTGTCGCAGGTATCCTAAAATaGCCGTTGCCCTTTGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: HVYAVTVTQDIKTQLGTVAGILK*PLPFGQ Trigger: TTGACCAAAGGGCAACGGCAATTTTAGGATACCTGC...GACAGTGCCCAGCTGGGTTTTGATGTCCTGTGTGACAGTGACAGCATAGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR TCA 72 bp | ACCCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTaGGCTGCATTCCTGGGCCAGAATTTTAAATCATCC | + |
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Preference number: 3 (lower is better) Translates to: TQDLVLGKDSVT*AAFLGQNFKSS Trigger: GGATGATTTAAAATTCTGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR GCA 72 bp | TGGATGCAGGCCCATAGGCATTCCCACCATTTACACTaGAGTCATCTCTCACTTCTTCTGAAGGGCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: WMQAHRHSHHLH*SHLSLLLKGLH Trigger: ATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGTAAATGGTGGGAATGCCTATGGGCCTGCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR CCA 72 bp | CACGTTGATCTTGCCACTCTTTTGAGGGACAATGTATaGATGCAACCGTCCCATAGCCACAAGGCAGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: HVDLATLLRDNV*MQPSHSHKAGK Trigger: CTTACCTGCCTTGTGGCTATGGGACGGTTGCATCCATACATTGTCCCTCAAAAGAGTGGCAAGATCAACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR TCA 72 bp | AAGTGTGCACCCAAATTGGTTTACAGTGCTAGGAACTaGACCCAAGACTTGGTGCTAGGCAAGGACTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: KCAPKLVYSARN*TQDLVLGKDSV Trigger: GACAGAGTCCTTGCCTAGCACCAAGTCTTGGGTTCAGTTCCTAGCACTGTAAACCAATTTGGGTGCACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| 3UTR GCA 72 bp | TGCCCTTTGGTCAACATAGACGAATTTCCCGTTCATTaGGAAGCGAGTTATGAACTCAGCCGGTCTCACGTT | + |
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Preference number: 3 (lower is better) Translates to: CPLVNIDEFPVH*EASYELSRSHV Trigger: AACGTGAGACCGGCTGAGTTCATAACTCGCTTCGCAATGAACGGGAAATTCGTCTATGTTGACCAAAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CAA 90 bp | GTTTGTGAAGCTGAACCACTCACTCTTCAGAGTCACGAAGGCACCATCCTTCACCTCTGCAGAACTGCTTaGTGCTTGTCAGTCAAACTA | + |
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Preference number: 3 (lower is better) Translates to: VCEAEPLTLQSHEGTILHLCRTA*CLSVKL Trigger: TAGTTTGACTGACAAGCACAAAGCAGTTCTGCAGAG...GTGAAGGATGGTGCCTTCGTGACTCTGAAGAGTGAGTGGTTCAGCTTCACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CAA 90 bp | CACCATTTACACTGCAGTCATCTCTCACTTCTTCTGAAGGGCTTGCATCTTCTGATGTACTCCAGCTCTTaGGTCCAAGGGTTTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: HHLHCSHLSLLLKGLHLLMYSSS*VQGFVK Trigger: CTTCACAAACCCTTGGACCAAAGAGCTGGAGTACAT...CAGAAGATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGTAAATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGAAGTGTGCACCCAAATaGGTTTACAGTGCTAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LTFNLLCAKAGFEFMILLKCAPK*VYSARN Trigger: GTTCCTAGCACTGTAAACCAATTTGGGTGCACACTT...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CCA 72 bp | CTGGGAATTGTGATATATGGCTTTAATCTCAACACTTaGGAGGAAGAGGCAGGCGGATCTTTGAGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGIVIYGFNLNT*EEEAGGSLSSR Trigger: CCTTGAACTCAAAGATCCGCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CCA 72 bp | ACATTCAGAGGCCAGCTTCTCAAGTATCCAGTGCAATaGACGGTGTGGAATTTTCTATGGTCTTTCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TFRGQLLKYPVQ*TVWNFLWSFFF Trigger: AAAGAAGAAAGACCATAGAAAATTCCACACCGTCCATTGCACTGGATACTTGAGAAGCTGGCCTCTGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCACAAGAGTACAGTGTTTaGTCAATGAAACACTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLGIVIYGFNLNTWEEEAQEYSV*SMKHSE Trigger: TTCAGAGTGTTTCATTGACAAAACACTGTACTCTTG...TGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGCTAAGTGATTTCTCATaGCCTCATGATTTTAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WARILNHPNSYTPFELPLLSDFS*PHDFRD Trigger: GTCCCTAAAATCATGAGGCAATGAGAAATCACTTAG...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CAA 72 bp | TGGTCCGTGAGGGTGGGCGGGTTCAGTGCTCTGGTGTaGCCTGGCAGCCTCCAGGACCTCTGTTTCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSVRVGGFSALV*PGSLQDLCFRR Trigger: CCTTCTGAAACAGAGGTCCTGGAGGCTGCCAGGCAACACCAGAGCACTGAACCCGCCCACCCTCACGGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| 3UTR CAA 72 bp | GCACCAAGGACGGTCCCCGTGGATACACCGGGCACATaGATGCAGGATTGTCTAAATGAGTCTTCGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: APRTVPVDTPGT*MQDCLNESSED Trigger: GTCCTCCGAAGACTCATTTAGACAATCCTGCATCAATGTGCCCGGTGTATCCACGGGGACCGTCCTTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTGAGCTGCATTCCTGGGCCAGTCTGTCATGAATTCTaGCTGGAGTGGCTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PRLGARQGLCHLSCIPGPVCHEF*LEWLGI Trigger: GATTCCCAGCCACTCCAGTCAGAATTCATGACAGAC...TGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTGAGCTGCATTCCTGGGCCACCGACTCTTTCTCCATaGCAACAACATTCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRLGARQGLCHLSCIPGPPTLSP*QQHSEA Trigger: GGCCTCTGAATGTTGTTGGCATGGAGAAAGAGTCGG...TGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACAATGTATGGATGCAACCGTCCCATAGCCACAAGGCAGGTAAGAGGACCTCTGACTGGAGTGGCTaGGAATCTCTGCCTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RDNVWMQPSHSHKAGKRTSDWSG*ESLPLR Trigger: ACGCAGAGGCAGAGATTCCCAGCCACTCCAGTCAGA...GGTCCTCTTACCTGCCTTGTGGCTATGGGACGGTTGCATCCATACATTGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCAGGCGCGGGTTCAGTGCTCTaGTGTTGCCTGGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGIVIYGFNLNTWEEEAGAGSVL*CCLAAS Trigger: GGAGGCTGCCAGGCAACACCAGAGCACTGAACCCGC...GCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCTGACCCCCAAGCTGCCTTCTCACTGTGTAAAGAGGGATTGATAAACGAAGCAAAGACAGCCTaGTCTCACTGCGCCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WQPDPQAAFSLCKEGLINEAKTA*SHCAPK Trigger: TTTTGGGGCGCAGTGAGACCAGGCTGTCTTTGCTTC...GTTTATCAATCCCTCTTTACACAGTGAGAAGGCAGCTTGGGGGTCAGGCTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAATGCTCTGGTGTTGCCTaGCAGCCTCCAGGACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKCSGVA*QPPGPL Trigger: CAGAGGTCCTGGAGGCTGCCAGGCAACACCAGAGCA...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTGAGCTGCATTCCTGGGCCACCAAAACCAATGTGTTaGCAGACACAATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLGARQGLCHLSCIPGPPKPMC*QTQCTP Trigger: TGGAGTACATTGTGTCTGTCAACACATTGGTTTTGG...TGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | GAACTCAGCCGGTCTCACGTTGATCTTGCCACTCTTTTGAGGGACAATGTATGGGTGGCTGGGAATCTCTaGCTCTGCGTTTCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELSRSHVDLATLLRDNVWVAGNL*LCVSLE Trigger: TTCCAAGGAAACGCAGAGGCAGAGATTCCCAGCCAC...CCATACATTGTCCCTCAAAAGAGTGGCAAGATCAACGTGAGACCGGCTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTGAGCTGCATTCCTGGGCCATCCCACCATTTACACTaGAGTCATCTCTCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRLGARQGLCHLSCIPGPSHHLH*SHLSLL Trigger: AAGAAGTGAGAGATGACTGCAGTGTAAATGGTGGGA...TGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAAAGGCTCCCTAGTGGATaGAGGCCCATAGGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKRLPSG*RPIGIP Trigger: GGGAATGCCTATGGGCCTGCATCCACTAGGGAGCCT...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCCTGACCCCCAAGCTGCCTTCTCACTGTGTAAAGAGGGATTGATAAACTTCAGAAGGGCTCACTaGAAAAGGCTCCCTAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQPDPQAAFSLCKEGLINFRRAH*KRLPSG Trigger: TCCACTAGGGAGCCTTTTGCAGTGAGCCCTTCTGAA...GTTTATCAATCCCTCTTTACACAGTGAGAAGGCAGCTTGGGGGTCAGGCTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGACTTGGTGCTAGGCAAGGACTCTGTCACCTGAGCTGCATTCCTGGGCCAGTTGTTCCTTTACTTTaGCGACGTCTTTTGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRLGARQGLCHLSCIPGPVVPLL*RRLLGV Trigger: TACACCCAAAAGACGTCGCCAAAGTAAAGGAACAAC...TGGCCCAGGAATGCAGCTCAGGTGACAGAGTCCTTGCCTAGCACCAAGTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CAA 72 bp | GACAGCCTGGTCTCACTGCGCCCCAAAACCAATGTGTaGACAGACACAATGTACTCCAGCTCTTTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSLVSLRPKTNV*TDTMYSSSLVQ Trigger: TTGGACCAAAGAGCTGGAGTACATTGTGTCTGTCAACACATTGGTTTTGGGGCGCAGTGAGACCAGGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAATCTGACTGGAGTGGCTaGGAATCTCTGCCTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKSDWSG*ESLPLR Trigger: ACGCAGAGGCAGAGATTCCCAGCCACTCCAGTCAGA...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCTGACCCCCAAGCTGCCTTCTCACTGTGTAAAGAGGGATTGATAAACGAGGCAAAGGGATTCTaGGGAAGACTTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQPDPQAAFSLCKEGLINEAKGF*GRLSTV Trigger: AACAGTGGAAAGTCTTCCCCAGAATCCCTTTGCCTC...GTTTATCAATCCCTCTTTACACAGTGAGAAGGCAGCTTGGGGGTCAGGCTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR TCA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGTTTTCCATCTGGCTGTaGGCTTCCCTGATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LTFNLLCAKAGFEFMILLFSIWL*ASLMPL Trigger: CAGTGGCATCAGGGAAGCTCACAGCCAGATGGAAAA...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAAGTGGCTGGGAATCTCTaGCTCTGCGTTTCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKVAGNL*LCVSLE Trigger: TTCCAAGGAAACGCAGAGGCAGAGATTCCCAGCCAC...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCACTGCGCCCCAAAACCAATGTGTTGACAGACACAATGTACTCCAGCTCTGAGGCAAAGGGATTCTaGGGAAGACTTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLRPKTNVLTDTMYSSSEAKGF*GRLSTV Trigger: AACAGTGGAAAGTCTTCCCCAGAATCCCTTTGCCTC...AGAGCTGGAGTACATTGTGTCTGTCAACACATTGGTTTTGGGGCGCAGTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR TCA 90 bp | CACCATTTACACTGCAGTCATCTCTCACTTCTTCTGAAGGGCTTGCATCTTCTGGTCTGTCATGAATTCTaGCTGGAGTGGCTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: HHLHCSHLSLLLKGLHLLVCHEF*LEWLGI Trigger: GATTCCCAGCCACTCCAGTCAGAATTCATGACAGAC...CAGAAGATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGTAAATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAAATGGTCTTTCTTCTTTaGGCAGGACGAGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKMVFLL*AGRAWL Trigger: CAGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCAT...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGTCTTTCTTCTTTGAGCAGGACGAGCATGGCTGCTCTTCTTTGACAGGGAGTAAAGCTCTGTCATaGCTCTCAGAGACCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWSFFFEQDEHGCSSLTGSKALS*LSETSS Trigger: ACTTGAGGTCTCTGAGAGGCATGACAGAGCTTTACT...CCCTGTCAAAGAAGAGCAGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGTCAGTGCTCTGGTGTTaGCTGGCAGCCTCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: WARILNHPNSYTPFELPLSVLWC*LAASRT Trigger: GGTCCTGGAGGCTGCCAGGCAACACCAGAGCACTGA...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCAAAAATATGGCAGCCTGACCCCCAAGCTGCCTTCTCACTGTGTAAAGAGAGAAGAAAGATCGTCTaGAGCCAGAATGCATGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKIWQPDPQAAFSLCKERRKIV*SQNACV Trigger: CACGCATGCATTCTGGCTCCAGACGATCTTTCTTCT...CTCTTTACACAGTGAGAAGGCAGCTTGGGGGTCAGGCTGCCATATTTTTGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAACTGTTGTGTCTGTCATaGATTCTGACTGGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKLLCLS*ILTGVA Trigger: AGCCACTCCAGTCAGAATTCATGACAGACACAACAG...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCAACAGCCTGGTCTCACTaGGCCCCAAAACCAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGIVIYGFNLNTWEEEATAWSH*APKPMC Trigger: ACACATTGGTTTTGGGGCGCAGTGAGACCAGGCTGT...TGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGCCAGTTTGTGGGCCGTaGGGATGTGTGGAGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: WARILNHPNSYTPFELPLPVCGP*GCVEGS Trigger: TGATCCCTCCACACATCCCCACGGCCCACAAACTGG...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CAA 72 bp | GCTGCCTTCTCACTGTGTAAAGAGGGATTGATAAACTaGGCTGTTTCTCTTTGGAGGAGCATGTGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAFSLCKEGLIN*AVSLWRSMCDS Trigger: GGAGTCACACATGCTCCTCCAAAGAGAAACAGCCAAGTTTATCAATCCCTCTTTACACAGTGAGAAGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR TCA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGATCTTGCCACTCTTTTaGGGGACAATGTATGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LTFNLLCAKAGFEFMILLILPLF*GTMYGC Trigger: GCATCCATACATTGTCCCTCAAAAGAGTGGCAAGAT...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAACTTCGAGGTAATTCATaGATGCAGCCATGTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKLRGNS*MQPCLC Trigger: GCATAGACATGGCTGCATTCATGAATTACCTCGAAG...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCAGGCAGTAAAGCTCTGTCATaGCTCTCAGAGACCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGIVIYGFNLNTWEEEAGSKALS*LSETSS Trigger: ACTTGAGGTCTCTGAGAGGCATGACAGAGCTTTACT...GCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CAA 72 bp | CCAAAAGTTCCTGAGGCAGGTATCCTAAAATTGCCGTaGCCCTTTGGTCAACATAGACGAATTTCCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKVPEAGILKLP*PFGQHRRISRS Trigger: TGAACGGGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTCAGGAACTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR TCA 90 bp | CACCATTTACACTGCAGTCATCTCTCACTTCTTCTGAAGGGCTTGCATCTTCTGTGGAGGGATCATAGATaGCAGTTTCTGAATCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HHLHCSHLSLLLKGLHLLWRDHR*QFLNQM Trigger: CATCTGATTCAGAAACTGTCATCTATGATCCCTCCA...CAGAAGATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGTAAATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCAGGCGTTCCCAAAAGTTCCTaGGGCAGGTATCCTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LGIVIYGFNLNTWEEEAGVPKSS*GRYPKI Trigger: AATTTTAGGATACCTGCCTCAGGAACTTTTGGGAAC...GCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAATTCTCAAGTATCCAGTaGAATGGACGGTGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKFSSIQ*NGRCGI Trigger: AATTCCACACCGTCCATTGCACTGGATACTTGAGAA...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAATGCAGAACTGCTTTGTaGTTGTCAGTCAAACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKCRTAL*LSVKLL Trigger: CAGTAGTTTGACTGACAAGCACAAAGCAGTTCTGCA...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAAGTGCAATGGACGGTGTaGAATTTTCTATGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSYKTARATQRNPVLKTKVQWTV*NFLWSF Trigger: GAAAGACCATAGAAAATTCCACACCGTCCATTGCAC...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CAA 72 bp | AAGTTCCCAAAAGTTCCTGAGGCAGGTATCCTAAAATaGCCGTTGCCCTTTGGTCAACATAGACGAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFPKVPEAGILK*PLPFGQHRRIS Trigger: GGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTCAGGAACTTTTGGGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| 3UTR CAA 72 bp | TTACACTGCAGTCATCTCTCACTTCTTCTGAAGGGCTaGCATCTTCTGGGGATGAAGAGTGTAATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHCSHLSLLLKG*HLLGMKSVISV Trigger: TACAGAGATTACACTCTTCATCCCCAGAAGATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR GCA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGATTTTCTCCTTACTCTaGAGAACTGCTTTGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTFNLLCAKAGFEFMILLIFSLL*RTALCL Trigger: CAAGCACAAAGCAGTTCTGCAGAGTAAGGAGAAAAT...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR TCA 90 bp | TATGAGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCTTTGTGCTTGTCACTGTTGTGTCTGTCATaGATTCTGACTGGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YESVSIFSLLCRTALCLSLLCLS*ILTGVA Trigger: AGCCACTCCAGTCAGAATTCATGACAGACACAACAG...TGACAAGCACAAAGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCACTTACTCTGCAGAACTaGTTTGTGCTTGTCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLGIVIYGFNLNTWEEEALTLQN*FVLVSQ Trigger: TTGACTGACAAGCACAAAGCAGTTCTGCAGAGTAAG...TGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| 3UTR CAA 72 bp | TTCAGAGTCACGAAGGCACCATCCTTCACTCTGAATTaGTATGAGTCTGTAAGTATTTTCTCCTTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRVTKAPSFTLN*YESVSIFSLLC Trigger: GCAGAGTAAGGAGAAAATACTTACAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTTCGTGACTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGTGGAGGGATCATAGATaGCAGTTTCTGAATCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WARILNHPNSYTPFELPLWRDHR*QFLNQM Trigger: CATCTGATTCAGAAACTGTCATCTATGATCCCTCCA...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCTTTGTGCTTGTCAGTTGTTCCTTTACTTTaGCGACGTCTTTTGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YESVSIFSLLCRTALCLSVVPLL*RRLLGV Trigger: TACACCCAAAAGACGTCGCCAAAGTAAAGGAACAAC...TGACAAGCACAAAGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| 3UTR CAA 72 bp | ATGAAGAGTGTAATCTCTGTAAACTCAGAACCTCATTaGCAATATCTGTTCCAATACTCCCAGCACCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MKSVISVNSEPH*QYLFQYSQHQG Trigger: TCCTTGGTGCTGGGAGTATTGGAACAGATATTGCAAATGAGGTTCTGAGTTTACAGAGATTACACTCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS TCA 90 bp | TGCCTCTCAGAGACCTCAAGTACTGCACCGCCCTCCTCAAGACGCTaGGCTTGTCCAGTTTGTGGGCCGTGGGGATGTGTGGAGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CLSETSSTAPPSSRR*ACPVCGPWGCVEGS Trigger: TGATCCCTCCACACATCCCCACGGCCCACAAACTGGACAAGCTCAGCGTCTTGAGGAGGGCGGTGCAGTACTTGAGGTCTCTGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGGGTGGGCGGGTTCAGTGCTCTGGTGTTGCCTGGCAGCCTCCAGGACCTCATACTCCTGTTCTTGTaGAAAGAAGAGAGGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVGGFSALVLPGSLQDLILLFL*KEERQR Trigger: CCTTTGCCTCTCTTCTTTCAACAAGAACAGGAGTAT...GAGGTCCTGGAGGCTGCCAGGCAACACCAGAGCACTGAACCCGCCCACCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCTGACCCCCAAGCTGCCTTCTCACTGTGTAAAGAGGGATTGATAAACTTCAGTGCTCTGGTGTaGCCTGGCAGCCTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WQPDPQAAFSLCKEGLINFSALV*PGSLQD Trigger: GTCCTGGAGGCTGCCAGGCAACACCAGAGCACTGAA...GTTTATCAATCCCTCTTTACACAGTGAGAAGGCAGCTTGGGGGTCAGGCTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS TCA 90 bp | AGGCAAAGGGATTCTGGGGAAGACTTTCCACTGTTGTGTCTGTCATaGATTCTGACTGGAGTGGCTGGGAATCTCTGCCTCTGCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQRDSGEDFPLLCLS*ILTGVAGNLCLCVS Trigger: GGAAACGCAGAGGCAGAGATTCCCAGCCACTCCAGTCAGAATTCATGACAGACACAACAGTGGAAAGTCTTCCCCAGAATCCCTTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS TCA 90 bp | ATCAGATGGTTCATCTTGTCTCTCCGACGCTTTTCCATCTGGCTGTaGGCTTCCCTGATGCCACTGGGCGCTGATACTCCTGTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IRWFILSLRRFSIWL*ASLMPLGADTPVLV Trigger: AACAAGAACAGGAGTATCAGCGCCCAGTGGCATCAGGGAAGCTCACAGCCAGATGGAAAAGCGTCGGAGAGACAAGATGAACCATCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS TCA 90 bp | GGGATTCTGGGGAAGACTTTCCACTGTTGTGTCTGTCATGAATTCTaGCTGGAGTGGCTGGGAATCTCTGCCTCTGCGTTTCCTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GILGKTFHCCVCHEF*LEWLGISASAFPWK Trigger: TTTCCAAGGAAACGCAGAGGCAGAGATTCCCAGCCACTCCAGTCAGAATTCATGACAGACACAACAGTGGAAAGTCTTCCCCAGAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACCTCTGTTTCAGAAGGGCTCACTGCAAAAGGCTCCCTAGTGGATGCAGGCTGATACTCCTGTTCTaGTTGAAAGAAGAGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QDLCFRRAHCKRLPSGCRLILLF*LKEERQ Trigger: TTGCCTCTCTTCTTTCAACAAGAACAGGAGTATCAG...CCTGCATCCACTAGGGAGCCTTTTGCAGTGAGCCCTTCTGAAACAGAGGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS CCA 90 bp | CTTCATTCTAAAGAAGAAAGATCGTCTGGAGCCAGAATGCATGCGTaGTCGCCCAGTGTAGGGGTGACTGTAAACCTGAGAGGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHSKEERSSGARMHA*SPSVGVTVNLRGFG Trigger: ACCAAAACCTCTCAGGTTTACAGTCACCCCTACACTGGGCGACCACGCATGCATTCTGGCTCCAGACGATCTTTCTTCTTTAGAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCAGGCATCAGATGGTTCATCTaGTCTCTCCGACGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGIVIYGFNLNTWEEEAGIRWFI*SLRRFS Trigger: GGAAAAGCGTCGGAGAGACAAGATGAACCATCTGAT...GCCTGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGATGTACTCCAGCTCTTaGGTCCAAGGGTTTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTFNLLCAKAGFEFMILLMYSSS*VQGFVK Trigger: CTTCACAAACCCTTGGACCAAAGAGCTGGAGTACAT...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS CCA 90 bp | GCTGATACTCCTGTTCTTGTTGAAAGAAGAGAGGCAAAGGGATTCTaGGGAAGACTTTCCACTGTTGTGTCTGTCATGAATTCTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ADTPVLVERREAKGF*GRLSTVVSVMNSDW Trigger: CCAGTCAGAATTCATGACAGACACAACAGTGGAAAGTCTTCCCCAGAATCCCTTTGCCTCTCTTCTTTCAACAAGAACAGGAGTATCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | CCAAAAGTTCCTGAGGCAGGTATCCTAAAATTGCCGTTGCCCTTTGGTCAACATCTTTGGCGACGTCTTTaGGGTGTAAGAAGTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PKVPEAGILKLPLPFGQHLWRRL*GVRSQT Trigger: TGTTTGACTTCTTACACCCAAAAGACGTCGCCAAAG...ATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTCAGGAACTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAACTCTGCAGAACTGCTTaGTGCTTGTCAGTCAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: VSYKTARATQRNPVLKTKLCRTA*CLSVKL Trigger: TAGTTTGACTGACAAGCACAAAGCAGTTCTGCAGAG...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAACCCAAAACCAATGTGTaGACAGACACAATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSYKTARATQRNPVLKTKPKTNV*TDTMYS Trigger: GGAGTACATTGTGTCTGTCAACACATTGGTTTTGGG...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCACTTCTTCTGAAGGGCTaGCATCTTCTGGGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLGIVIYGFNLNTWEEEALLLKG*HLLGMK Trigger: CTTCATCCCCAGAAGATGCAAGCCCTTCAGAAGAAG...TGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS GCA 90 bp | TGGAATTTTCTATGGTCTTTCTTCTTTGAGCAGGACGAGCATGGCTaGTCTTCTTTGACAGGGACGGTACAGCTCTTCATTCTAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WNFLWSFFFEQDEHG*SSLTGTVQLFILKK Trigger: CTTCTTTAGAATGAAGAGCTGTACCGTCCCTGTCAAAGAAGAGCAGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCATAGAAAATTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | CTGACCTTCAATCTGCTTTGTGCCAAGGCTGGCTTTGAATTTATGATCCTCCTGCTGATACTCCTGTTCTaGTTGAAAGAAGAGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LTFNLLCAKAGFEFMILLLILLF*LKEERQ Trigger: TTGCCTCTCTTCTTTCAACAAGAACAGGAGTATCAG...CAGGAGGATCATAAATTCAAAGCCAGCCTTGGCACAAAGCAGATTGAAGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGGTATCCTAAAATTGCCGTTGCCCTTTGGTCAACATAGACGAATTTCCACCATCACAAGAAAGTaGTTCCTTTACTTTGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EAGILKLPLPFGQHRRISTITRK*FLYFGD Trigger: GTCGCCAAAGTAAAGGAACAACTTTCTTGTGATGGT...GGAAATTCGTCTATGTTGACCAAAGGGCAACGGCAATTTTAGGATACCTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCAGCAGGTATCCTAAAATaGCCGTTGCCCTTTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KLGIVIYGFNLNTWEEEAAGILK*PLPFGQ Trigger: TTGACCAAAGGGCAACGGCAATTTTAGGATACCTGC...TGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGAATTGTGATATATGGCTTTAATCTCAACACTTGGGAGGAAGAGGCACTTTGGCGACGTCTTTaGGGTGTAAGAAGTCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: KLGIVIYGFNLNTWEEEALWRRL*GVRSQT Trigger: TGTTTGACTTCTTACACCCAAAAGACGTCGCCAAAG...TGCCTCTTCCTCCCAAGTGTTGAGATTAAAGCCATATATCACAATTCCCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTACAAGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAGACAAAAAACTCAGAACCTCATTaGCAATATCTGTTCCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: VSYKTARATQRNPVLKTKNSEPH*QYLFQY Trigger: GTATTGGAACAGATATTGCAAATGAGGTTCTGAGTT...TTTTGTCTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGTAACTCAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS TCA 90 bp | ACTGTAAACCTGAGAGGTTTTGGTGTCTATAGGTTTCTCTCTTGGTaGACCATCACAAGAAAGTTGTTCCTTTACTTTGGCGACGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVNLRGFGVYRFLSW*TITRKLFLYFGDVF Trigger: AAAGACGTCGCCAAAGTAAAGGAACAACTTTCTTGTGATGGTTCACCAAGAGAGAAACCTATAGACACCAAAACCTCTCAGGTTTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGAGTTGTTCCTTTACTTaGGCGACGTCTTTTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WARILNHPNSYTPFELPLSCSFT*ATSFGC Trigger: ACACCCAAAAGACGTCGCCAAAGTAAAGGAACAACT...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
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| CDS-3UTR CAA 90 bp | TATGAGTCTGTAAGTATTTTCTCCTTACTCTGCAGAACTGCTTTGTGCTTGTCAAGTTGTTCCTTTACTTaGGCGACGTCTTTTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YESVSIFSLLCRTALCLSSCSFT*ATSFGC Trigger: ACACCCAAAAGACGTCGCCAAAGTAAAGGAACAACT...TGACAAGCACAAAGCAGTTCTGCAGAGTAAGGAGAAAATACTTACAGACTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129788.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCCAGAATTTTAAATCATCCTAATTCTTACACTCCATTTGAGCTACCTCTGACCATCACAAGAAAGTaGTTCCTTTACTTTGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: WARILNHPNSYTPFELPLTITRK*FLYFGD Trigger: GTCGCCAAAGTAAAGGAACAACTTTCTTGTGATGGT...CAGAGGTAGCTCAAATGGAGTGTAAGAATTAGGATGATTTAAAATTCTGGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATTGCCTCATGATTTTAGGGACTGTATTTAAGCTGGGAATTGTGATATATTATGGTCTTTCTTCTTaGAGCAGGACGAGCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHCLMILGTVFKLGIVIYYGLSS*SRTSMA Trigger: AGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCATA...ATATATCACAATTCCCAGCTTAAATACAGTCCCTAAAATCATGAGGCAATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATTGCCTCATGATTTTAGGGACTGTATTTAAGCTGGGAATTGTGATATATAGAACTGCTTTGTGCTaGTCAGTCAAACTACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHCLMILGTVFKLGIVIYRTALC*SVKLLW Trigger: CCACAGTAGTTTGACTGACAAGCACAAAGCAGTTCT...ATATATCACAATTCCCAGCTTAAATACAGTCCCTAAAATCATGAGGCAATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATTGCCTCATGATTTTAGGGACTGTATTTAAGCTGGGAATTGTGATATATATACTCCTGTTCTTGTaGAAAGAAGAGAGGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHCLMILGTVFKLGIVIYILLFL*KEERQR Trigger: CCTTTGCCTCTCTTCTTTCAACAAGAACAGGAGTAT...ATATATCACAATTCCCAGCTTAAATACAGTCCCTAAAATCATGAGGCAATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111639.8 |
||
| CDS GCA 72 bp | GGCAGCCTCCAGGACCTCTGTTTCAGAAGGGCTCACTaGAAAAGGCTCCCTAGTGGATGCACTGCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GSLQDLCFRRAH*KRLPSGCTAVI Trigger: GATGACTGCAGTGCATCCACTAGGGAGCCTTTTGCAGTGAGCCCTTCTGAAACAGAGGTCCTGGAGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111636.8 |
||
| CDS TCA 72 bp | CTCTCCGACGCTTTTCCATCTGGCTGTGAGCTTCCCTaGTGCCACTGGGCGCTGATACTCCTGTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSDAFPSGCELP*CHWALILLFLL Trigger: CAACAAGAACAGGAGTATCAGCGCCCAGTGGCATCAGGGAAGCTCACAGCCAGATGGAAAAGCGTCGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS CCA 72 bp | AAAGAAGAAAGATCGTCTGGAGCCAGAATGCATGCGTaGTCGCCCAGTGTAGGGGTGACTGTAAACCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KEERSSGARMHA*SPSVGVTVNLR Trigger: TCTCAGGTTTACAGTCACCCCTACACTGGGCGACCACGCATGCATTCTGGCTCCAGACGATCTTTCTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
||
| CDS GCA 72 bp | CTATGGTCTTTCTTCTTTGAGCAGGACGAGCATGGCTaGTCTTCTTTGACAGGGACGGTACAGCTCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LWSFFFEQDEHG*SSLTGTVQLFI Trigger: AATGAAGAGCTGTACCGTCCCTGTCAAAGAAGAGCAGCCATGCTCGTCCTGCTCAAAGAAGAAAGACCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
||
| CDS CCA 72 bp | AGACTTTCCACTGTTGTGTCTGTCATGAATTCTGACTaGAGTGGCTGGGAATCTCTGCCTCTGCGTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLSTVVSVMNSD*SGWESLPLRFL Trigger: AAGGAAACGCAGAGGCAGAGATTCCCAGCCACTCCAGTCAGAATTCATGACAGACACAACAGTGGAAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS TCA 72 bp | TTTGTGGGCCGTGGGGATGTGTGGAGGGATCATAGATaGCAGTTTCTGAATCAGATGGTTCATCTTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FVGRGDVWRDHR*QFLNQMVHLVS Trigger: AGAGACAAGATGAACCATCTGATTCAGAAACTGTCATCTATGATCCCTCCACACATCCCCACGGCCCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 ENSMUST00000129788.8 |
||
| CDS CAA 72 bp | TTCTTCTTTGAGCAGGACGAGCATGGCTGCTCTTCTTaGACAGGGACGGTACAGCTCTTCATTCTAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FFFEQDEHGCSS*TGTVQLFILKK Trigger: CTTCTTTAGAATGAAGAGCTGTACCGTCCCTGTCAAAGAAGAGCAGCCATGCTCGTCCTGCTCAAAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
||
| CDS CAA 90 bp | CACTCACTCTTCAGAGTCACGAAGGCACCATCCTTCACTCTGAATTaGTATGAGTCTGCTTTGTGCTTGTCAGTCAAACTACTGTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSLFRVTKAPSFTLN*YESALCLSVKLLWS Trigger: TGACCACAGTAGTTTGACTGACAAGCACAAAGCAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTTCGTGACTCTGAAGAGTGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111638.8 |
||
| CDS TCA 72 bp | CACTCTTCAGAGTCACGAAGGCACCATCCTTCACTCTaGATTTGTATGAGTCTGCTTTGTGCTTGTCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSSESRRHHPSL*ICMSLLCACQS Trigger: TGACTGACAAGCACAAAGCAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTTCGTGACTCTGAAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111638.8 |
||
| CDS CAA 72 bp | ATGCACTGCAGTCATCTCTCACTTCTTCTGAAGGGCTaGCATCTTCTGGGGATGAAGAGTGTAATCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: MHCSHLSLLLKG*HLLGMKSVISV Trigger: TACAGAGATTACACTCTTCATCCCCAGAAGATGCAAGCCCTTCAGAAGAAGTGAGAGATGACTGCAGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111636.8 |
||
| CDS CAA 72 bp | TTCAGAGTCACGAAGGCACCATCCTTCACTCTGAATTaGTATGAGTCTGCTTTGTGCTTGTCAGTCAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: FRVTKAPSFTLN*YESALCLSVKL Trigger: TAGTTTGACTGACAAGCACAAAGCAGACTCATACAAATTCAGAGTGAAGGATGGTGCCTTCGTGACTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111638.8 |
||
| CDS TCA 72 bp | CTGAGAGGTTTTGGTGTCTATAGGTTTCTCTCTTGGTaGACCATCACAAGAAAGTTGTTCCTTTACTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LRGFGVYRFLSW*TITRKLFLYFG Trigger: GCCAAAGTAAAGGAACAACTTTCTTGTGATGGTTCACCAAGAGAGAAACCTATAGACACCAAAACCTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080530.6 ENSMUST00000111636.8 ENSMUST00000111638.8 ENSMUST00000111639.8 |
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