Pregenerated sensors for ARMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061759Ensembl transcript IDs: ENSMUST00000095893.11, ENSMUST00000117489.8, ENSMUST00000118544.8, ENSMUST00000152294.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATATTCCATACCTGCCAGTGGTCAGCCAGTGGGGATCAGAGGCCGTaGGCTGCTCCGCCTGCCCAGGCTGCAGACCAACCTGAAGCTCGC | + |
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Preference number: 1 (lower is better) Translates to: IFHTCQWSASGDQRP*AAPPAQAADQPEAR Trigger: GCGAGCTTCAGGTTGGTCTGCAGCCTGGGCAGGCGGAGCAGCTCACGGCCTCTGATCCCCACTGGCTGACCACTGGCAGGTATGGAATAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR TCA 90 bp | GCCTGCAGGGACCATGTGCACACGGCAGAGCTGACAGTGTCCAGCTaGAGTGGTGCCTTCTGGGCCCTTCAACCCATCTCAGGTCATCCA | + |
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Preference number: 1 (lower is better) Translates to: ACRDHVHTAELTVSS*SGAFWALQPISGHP Trigger: TGGATGACCTGAGATGGGTTGAAGGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGCACATGGTCCCTGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR TCA 90 bp | TCAGAGGCCGTGAGCTGCTCCGCCTGCCCAGGCTGCAGACCAACCTaGAGCTCGCACTTTAATGTCCTTATGCTACAGAGAGGTGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SEAVSCSACPGCRPT*SSHFNVLMLQRGAG Trigger: CCCTGCACCTCTCTGTAGCATAAGGACATTAAAGTGCGAGCTTCAGGTTGGTCTGCAGCCTGGGCAGGCGGAGCAGCTCACGGCCTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | GGACCATGTGCACACGGCAGAGCTGACAGTGTCCAGCTGAAGTGGTaGCTTCTGGGCCCTTCAACCCATCTCAGGTCATCCATTTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GPCAHGRADSVQLKW*LLGPSTHLRSSICP Trigger: GGGGCAAATGGATGACCTGAGATGGGTTGAAGGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGCACATGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR CCA 90 bp | CAGGGACCATGTGCACACGGCAGAGCTGACAGTGTCCAGCTGAAGTaGTGCCTTCTGGGCCCTTCAACCCATCTCAGGTCATCCATTTGC | + |
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Preference number: 1 (lower is better) Translates to: QGPCAHGRADSVQLK*CLLGPSTHLRSSIC Trigger: GCAAATGGATGACCTGAGATGGGTTGAAGGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGCACATGGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | AGCATTTGGCACAGCAGCTGGCATGAAGCTCAGGCTTTCAGCACTTaGCTGGAATGCCTGAGGGCCTGGGTTCAACCCCAGTATCACCAC | + |
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Preference number: 1 (lower is better) Translates to: SIWHSSWHEAQAFST*LECLRAWVQPQYHH Trigger: GTGGTGATACTGGGGTTGAACCCAGGCCCTCAGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTGCCAAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | AGGAAAGGGGCTGCTCACGCTGAGGAGAAGCCAGGCCTAAATCCATaGACTGAGGCTGAAGGGAGACTCAGAATGTTCTCTGCAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: RKGAAHAEEKPGLNP*TEAEGRLRMFSATR Trigger: CCTGGTTGCAGAGAACATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGGCTTCTCCTCAGCGTGAGCAGCCCCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | GCCCAGGCTGCAGACCAACCTGAAGCTCGCACTTTAATGTCCTTATaGTACAGAGAGGTGCAGGGTGGAAGCCACTCAGAGCCTGATGGA | + |
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Preference number: 1 (lower is better) Translates to: AQAADQPEARTLMSL*YREVQGGSHSEPDG Trigger: TCCATCAGGCTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATAAGGACATTAAAGTGCGAGCTTCAGGTTGGTCTGCAGCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR CCA 90 bp | TCACGGCACACCAGTCTTGGCTATGGAAGCATTTGGCACAGCAGCTaGCATGAAGCTCAGGCTTTCAGCACTTGCCTGGAATGCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SRHTSLGYGSIWHSS*HEAQAFSTCLECLR Trigger: CCTCAGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTGCCAAATGCTTCCATAGCCAAGACTGGTGTGCCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR TCA 90 bp | GGTTCTGCAACCCAAACCAGAACAGAGTCCTGCCCACCTGAGGACTaGCATAACGCATGTCACGGCACACCAGTCTTGGCTATGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GSATQTRTESCPPED*HNACHGTPVLAMEA Trigger: TGCTTCCATAGCCAAGACTGGTGTGCCGTGACATGCGTTATGTCAGTCCTCAGGTGGGCAGGACTCTGTTCTGGTTTGGGTTGCAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | CTGCAACCAGGAACTCCTGAGTGGCGTCAAAGTGGCCCATCAAACTaGAATATTCCATACCTGCCAGTGGTCAGCCAGTGGGGATCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: LQPGTPEWRQSGPSN*NIPYLPVVSQWGSE Trigger: CTCTGATCCCCACTGGCTGACCACTGGCAGGTATGGAATATTGCAGTTTGATGGGCCACTTTGACGCCACTCAGGAGTTCCTGGTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR TCA 90 bp | TCTGGCCTTATCTACGAGGGAGCAGAAAGACAGGAGACAACCGGCTaGCCCCTCCCCTTTAGGATATGTATGGGACAAAGGACACAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: SGLIYEGAERQETTG*PLPFRICMGQRTQV Trigger: AACCTGTGTCCTTTGTCCCATACATATCCTAAAGGGGAGGGGTCAGCCGGTTGTCTCCTGTCTTTCTGCTCCCTCGTAGATAAGGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR TCA 90 bp | GTCCTTATGCTACAGAGAGGTGCAGGGTGGAAGCCACTCAGAGCCTaGTGGAACGGAAAGGTGAACTTCCATTTTCTGTCACCCATCAGC | + |
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Preference number: 1 (lower is better) Translates to: VLMLQRGAGWKPLRA*WNGKVNFHFLSPIS Trigger: GCTGATGGGTGACAGAAAATGGAAGTTCACCTTTCCGTTCCATCAGGCTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR CCA 90 bp | GAGCTGAACGAACTTCAGGCTTCTCTTAGGACAAGAAGACAACTCTaGCCTTATCTACGAGGGAGCAGAAAGACAGGAGACAACCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ELNELQASLRTRRQL*PYLRGSRKTGDNRL Trigger: CAGCCGGTTGTCTCCTGTCTTTCTGCTCCCTCGTAGATAAGGCCAGAGTTGTCTTCTTGTCCTAAGAGAAGCCTGAAGTTCGTTCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | CAGGCCCCACAGGTGGACATGGACTCCAGATTGCTGCTCTTCATGTaGTCAACTATCCAATTAAAGTCATGCTCAGTAACGTCAGACACA | + |
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Preference number: 1 (lower is better) Translates to: QAPQVDMDSRLLLFM*STIQLKSCSVTSDT Trigger: TGTGTCTGACGTTACTGAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGAGTCCATGTCCACCTGTGGGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118544.8 ENSMUST00000152294.2 |
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| 3UTR TCA 90 bp | GAGGTGCAGGGTGGAAGCCACTCAGAGCCTGATGGAACGGAAAGGTaGACTTCCATTTTCTGTCACCCATCAGCTTCCTATAATTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: EVQGGSHSEPDGTER*TSIFCHPSASYNSN Trigger: ATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCTTTCCGTTCCATCAGGCTCTGAGTGGCTTCCACCCTGCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 90 bp | TCCAGATTGCTGCTCTTCATGTGCTCAACTATCCAATTAAAGTCATaGTCAGTAACGTCAGACACAAACCATGGGATGCTTTTCCCATGG | + |
|
Preference number: 1 (lower is better) Translates to: SRLLLFMCSTIQLKS*SVTSDTNHGMLFPW Trigger: CCATGGGAAAAGCATCCCATGGTTTGTGTCTGACGTTACTGAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118544.8 ENSMUST00000152294.2 |
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| 3UTR GCA 90 bp | ACTGTACTCGTACTTCGTCAGTCACTCTTTACGATGTCCAGTTTGTaGTTTGACCCATTCCACAGGCCAATCAAAATACAAATCTATGCA | + |
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Preference number: 1 (lower is better) Translates to: TVLVLRQSLFTMSSL*FDPFHRPIKIQIYA Trigger: TGCATAGATTTGTATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGAAGTACGAGTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR TCA 90 bp | ACTCGTACTTCGTCAGTCACTCTTTACGATGTCCAGTTTGTGCTTTaGCCCATTCCACAGGCCAATCAAAATACAAATCTATGCAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: TRTSSVTLYDVQFVL*PIPQANQNTNLCKK Trigger: TTTCTTGCATAGATTTGTATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGAAGTACGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR CCA 90 bp | TTCTCTAATTACATTTATTTATTTACCGAGGGTGCTCATGTGACGTaGTATGCCTACGGAAGTCAGATCAAAGGACAACTTTGGGGATTC | + |
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Preference number: 1 (lower is better) Translates to: FSNYIYLFTEGAHVT*YAYGSQIKGQLWGF Trigger: GAATCCCCAAAGTTGTCCTTTGATCTGACTTCCGTAGGCATACCACGTCACATGAGCACCCTCGGTAAATAAATAAATGTAATTAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCAGAACAGAGTCCTGCCCACCTGAGGACTGACATAACGCATGTCACGGCAGGACCACCTGTTCCATaGGGTGCAGGGCCAGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: KPEQSPAHLRTDITHVTAGPPVP*GAGPAG Trigger: GCCGGCTGGCCCTGCACCCCATGGAACAGGTGGTCC...TGCCGTGACATGCGTTATGTCAGTCCTCAGGTGGGCAGGACTCTGTTCTGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAAGGGGCTGCTCACGCTaGGGAGAAGCCAGGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ASRESSYKACVHWATNSRRGCSR*GEARPK Trigger: TTTAGGCCTGGCTTCTCCTCAGCGTGAGCAGCCCCT...TCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR-3UTR TCA 90 bp | ACGCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAAAGATACACAGGAGCTaGGGAAAGGGGCTGCTCACG | + |
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Preference number: 2 (lower is better) Translates to: TPPGRARTRHVFTGPLTQKIHRS*GKGLLT Trigger: CGTGAGCAGCCCCTTTCCTCAGCTCCTGTGTATCTT...TTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGCAGCTGGCATGAAGCTCAGGCTTTCAGCACTTGCCTGGAATGCCTGAGGAATCACCCAAGGGGCTaGAGGGATGGTTCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HSSWHEAQAFSTCLECLRNHPRG*RDGSAA Trigger: AGCTGCTGAACCATCCCTGCAGCCCCTTGGGTGATT...CCTCAGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR TCA 90 bp | CACACAATATGGATGAGGCAGAGTCCAAAATGCATGGTCGTGGTAAGCCCACCTAGGGGCTGCTCACGCTaGGGAGAAGCCAGGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: HTIWMRQSPKCMVVVSPPRGCSR*GEARPK Trigger: TTTAGGCCTGGCTTCTCCTCAGCGTGAGCAGCCCCT...AGGTGGGCTTACCACGACCATGCATTTTGGACTCTGCCTCATCCATATTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGAAGCCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGTCAACAGTCTGCTGCTaGAGACTGACGCTGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: EEKPGLNPCTEAEGRLRMSTVCC*RLTLGS Trigger: TGAGCCCAGCGTCAGTCTGCAGCAGCAGACTGTTGA...CATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGGCTTCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR-3UTR CCA 90 bp | CACAATATGGATGAGGCAGAGTCCAAAATGCATGGTCGTGGTAAGCCCACCTCCCCAAACCTGATGGCCTaGACTCAGTCCCTGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: HNMDEAESKMHGRGKPTSPNLMA*TQSLHP Trigger: GGGATGCAGGGACTGAGTCCAGGCCATCAGGTTTGG...GGAGGTGGGCTTACCACGACCATGCATTTTGGACTCTGCCTCATCCATATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR TCA 90 bp | CACAATATGGATGAGGCAGAGTCCAAAATGCATGGTCGTGGTAAGCCCACCTCCAAGATACACAGGAGCTaGGGAAAGGGGCTGCTCACG | + |
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Preference number: 2 (lower is better) Translates to: HNMDEAESKMHGRGKPTSKIHRS*GKGLLT Trigger: CGTGAGCAGCCCCTTTCCTCAGCTCCTGTGTATCTT...GGAGGTGGGCTTACCACGACCATGCATTTTGGACTCTGCCTCATCCATATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR CAA 90 bp | ATAAAACAAAGTGGGGCTGGTAAGGTGGCTCAGCAGGTAACAGAATaGGCCACCAAACCTGATGGCCTGGACTCAGTCCCTGCATCCCAT | + |
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Preference number: 2 (lower is better) Translates to: IKQSGAGKVAQQVTE*ATKPDGLDSVPASH Trigger: ATGGGATGCAGGGACTGAGTCCAGGCCATCAGGTTTGGTGGCCAATTCTGTTACCTGCTGAGCCACCTTACCAGCCCCACTTTGTTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGTAACAGAATTGGCCACCAAACCTGATGGCCTGGACTCAGTCCCTGCAACAAGAAGACAACTCTaGCCTTATCTACGAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QQVTELATKPDGLDSVPATRRQL*PYLRGS Trigger: GCTCCCTCGTAGATAAGGCCAGAGTTGTCTTCTTGT...TGCAGGGACTGAGTCCAGGCCATCAGGTTTGGTGGCCAATTCTGTTACCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGGAAATCTGCAGGAGTTTAAAGAACTCATCCTGGATCTGCTCTTCCCTCAGCTGCAGCAGGTGTaGACACAGAGCATCGATGGA | + |
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Preference number: 2 (lower is better) Translates to: PEGNLQEFKELILDLLFPQLQQV*TQSIDG Trigger: TCCATCGATGCTCTGTGTTCACACCTGCTGCAGCTG...AGGGAAGAGCAGATCCAGGATGAGTTCTTTAAACTCCTGCAGATTTCCCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGGAAATCTGCAGGAGTTTAAAGAACTCATCCTGGATCTGCTCTTCCCTTTGACGGGCTTCAGCTaGAGCAGGTGTGAACACAGA | + |
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Preference number: 2 (lower is better) Translates to: PEGNLQEFKELILDLLFPLTGFS*SRCEHR Trigger: TCTGTGTTCACACCTGCTGCAGCTGAAGCCCGTCAA...AGGGAAGAGCAGATCCAGGATGAGTTCTTTAAACTCCTGCAGATTTCCCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
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| 3UTR-3UTR CCA 90 bp | ACGCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAACCTTTAGGATATGTATaGGACAAAGGACACAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: TPPGRARTRHVFTGPLTQPLGYV*DKGHRF Trigger: AAACCTGTGTCCTTTGTCCCATACATATCCTAAAGG...TTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGCCGGACCTGTGTTTAAACATTGTCTGTTACAGATCATCAGCAGTTAAGTCAACAGTCTGCTGCTaGAGACTGACGCTGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VEPDLCLNIVCYRSSAVKSTVCC*RLTLGS Trigger: TGAGCCCAGCGTCAGTCTGCAGCAGCAGACTGTTGA...CTTAACTGCTGATGATCTGTAACAGACAATGTTTAAACACAGGTCCGGCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGCCGGACCTGTGTTTAAACATTGTCTGTTACAGATCATCAGCAGTTAAGTCACAACATCTGAGGTaGGGGACACACAGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VEPDLCLNIVCYRSSAVKSQHLR*GTHSVR Trigger: TCTCACACTGTGTGTCCCTCACCTCAGATGTTGTGA...CTTAACTGCTGATGATCTGTAACAGACAATGTTTAAACACAGGTCCGGCTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGCCGGACCTGTGTTTAAACATTGTCTGTTACAGATCATCAGCAGTTAAGACGGCACACCAGTCTTaGCTATGGAAGCATTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: VEPDLCLNIVCYRSSAVKTAHQS*LWKHLA Trigger: TGCCAAATGCTTCCATAGCCAAGACTGGTGTGCCGT...CTTAACTGCTGATGATCTGTAACAGACAATGTTTAAACACAGGTCCGGCTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR CAA 90 bp | ACACACGCACACACACACACACACCACCACCACCACCACCACACATaGTCCAGAGAAATTCTACTCTCCTTTATATGCACTTTTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: THAHTHTHHHHHHHT*SREILLSFICTFSE Trigger: TTCAGAAAAAGTGCATATAAAGGAGAGTAGAATTTCTCTGGACAATGTGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTGTGCGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGATTGCTGCTCTTCATGTGCTCAACTATCCAATTAAAGTCATGCTCAGTACCTGCATCCCATATGTaGAAGGAGAGACAACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRLLLFMCSTIQLKSCSVPASHM*KERQPL Trigger: CAGGGGTTGTCTCTCCTTCCACATATGGGATGCAGG...TACTGAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR GCA 90 bp | GACATGGACTCCAGATTGCTGCTCTTCATGTGCTCAACTATCCAATTAAAGTCATTAAACCCAAACCAATaGAGCGGGGCAAACCATTCC | + |
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Preference number: 2 (lower is better) Translates to: DMDSRLLLFMCSTIQLKSLNPNQ*SGANHS Trigger: GGAATGGTTTGCCCCGCTGCATTGGTTTGGGTTTAA...TGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGAGTCCATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTATATTGGCCTTCTGAGAACTACTTTCTCCACCTGAGAGAGACAGATCACCTCAGGTCATCCATTTaGCCCCAGTATCACAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LLYWPSENYFLHLRETDHLRSSI*PQYHKY Trigger: GTACTTGTGATACTGGGGGCAAATGGATGACCTGAG...GTGATCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCAATATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR CAA 90 bp | ACCACTGTACTCGTACTTCGTCAGTCACTCTTTACGATGTCCAGTTaGTGCTTTGACCCATTCCACAGGCCAATCAAAATACAAATCTAT | + |
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Preference number: 2 (lower is better) Translates to: TTVLVLRQSLFTMSS*CFDPFHRPIKIQIY Trigger: ATAGATTTGTATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGAAGTACGAGTACAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR CAA 90 bp | TACTCGTACTTCGTCAGTCACTCTTTACGATGTCCAGTTTGTGCTTaGACCCATTCCACAGGCCAATCAAAATACAAATCTATGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YSYFVSHSLRCPVCA*THSTGQSKYKSMQE Trigger: TTCTTGCATAGATTTGTATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGAAGTACGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGTCCGCCAATACTAAATCCGTAATCAGTTCAAAGCCAGAATTATCCAGACCCCAGAGGGAAATCTaGAGGAGTTTAAAGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: KKSANTKSVISSKPELSRPQREI*RSLKNS Trigger: TGAGTTCTTTAAACTCCTGCAGATTTCCCTCTGGGG...TCTGGATAATTCTGGCTTTGAACTGATTACGGATTTAGTATTGGCGGACTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
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| 3UTR TCA 72 bp | CCCCAGCCTGCAGGGACCATGTGCACACGGCAGAGCTaGCAGTGTCCAGCTGAAGTGGTGCCTTCTGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: PQPAGTMCTRQS*QCPAEVVPSGP Trigger: GGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGCACATGGTCCCTGCAGGCTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR GCA 72 bp | GAAGGCTCAAACAAAAGGACCACCTGTTCCATGGGGTaGAGGGCCAGCCGGCATAGCATGGAAGGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: EGSNKRTTCSMG*RASRHSMEGPG Trigger: GCCAGGGCCTTCCATGCTATGCCGGCTGGCCCTGCACCCCATGGAACAGGTGGTCCTTTTGTTTGAGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
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| 3UTR TCA 72 bp | CCTGAGGCCTTTGACGGGCTTCAGCTGCAGCAGGTGTaGACACAGAGCATCGATGGAGCCCTGCGACTCGAA | + |
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Preference number: 3 (lower is better) Translates to: PEAFDGLQLQQV*TQSIDGALRLE Trigger: TTCGAGTCGCAGGGCTCCATCGATGCTCTGTGTTCACACCTGCTGCAGCTGAAGCCCGTCAAAGGCCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
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| 3UTR GCA 72 bp | GCACACGGCAGAGCTGACAGTGTCCAGCTGAAGTGGTaGCTTCTGGGCCCTTCAACCCATCTCAGGTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: AHGRADSVQLKW*LLGPSTHLRSS Trigger: GGATGACCTGAGATGGGTTGAAGGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | CACAGCAGCTGGCATGAAGCTCAGGCTTTCAGCACTTaGCTGGAATGCCTGAGGGCCTGGGTTCAACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSSWHEAQAFST*LECLRAWVQPQ Trigger: CTGGGGTTGAACCCAGGCCCTCAGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | GACCATGTGCACACGGCAGAGCTGACAGTGTCCAGCTaGAGTGGTGCCTTCTGGGCCCTTCAACCCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DHVHTAELTVSS*SGAFWALQPIS Trigger: TGAGATGGGTTGAAGGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGCACATGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | ATCTGCTCTTCCCTGAGGCCTTTGACGGGCTTCAGCTaGAGCAGGTGTGAACACAGAGCATCGATGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ICSSLRPLTGFS*SRCEHRASMEP Trigger: GGGCTCCATCGATGCTCTGTGTTCACACCTGCTGCAGCTGAAGCCCGTCAAAGGCCTCAGGGAAGAGCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
||
| 3UTR CCA 72 bp | TGTGCACACGGCAGAGCTGACAGTGTCCAGCTGAAGTaGTGCCTTCTGGGCCCTTCAACCCATCTCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CAHGRADSVQLK*CLLGPSTHLRS Trigger: TGACCTGAGATGGGTTGAAGGGCCCAGAAGGCACCACTTCAGCTGGACACTGTCAGCTCTGCCGTGTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | TGGCATGAAGCTCAGGCTTTCAGCACTTGCCTGGAATaGCTGAGGGCCTGGGTTCAACCCCAGTATCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: WHEAQAFSTCLE*LRAWVQPQYHH Trigger: GTGGTGATACTGGGGTTGAACCCAGGCCCTCAGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | GGTGGCTCAGCAGGTAACAGAATTGGCCACCAAACCTaGTGGCCTGGACTCAGTCCCTGCATCCCATATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGSAGNRIGHQT*WPGLSPCIPYV Trigger: CACATATGGGATGCAGGGACTGAGTCCAGGCCATCAGGTTTGGTGGCCAATTCTGTTACCTGCTGAGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | ACCCAAACCAGAACAGAGTCCTGCCCACCTGAGGACTaGCATAACGCATGTCACGGCACACCAGTCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TQTRTESCPPED*HNACHGTPVLA Trigger: AGCCAAGACTGGTGTGCCGTGACATGCGTTATGTCAGTCCTCAGGTGGGCAGGACTCTGTTCTGGTTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CCA 72 bp | GCTTCAGCTGCAGCAGGTGTGAACACAGAGCATCGATaGAGCCCTGCGACTCGAAGAAGTTCTCCTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASAAAGVNTEHR*SPATRRSSPLC Trigger: GCAAAGAGGAGAACTTCTTCGAGTCGCAGGGCTCCATCGATGCTCTGTGTTCACACCTGCTGCAGCTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
||
| 3UTR GCA 72 bp | GGGCATCACACAATATGGATGAGGCAGAGTCCAAAATaGATGGTCGTGGTAAGCCCACCTCCCCATCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GHHTIWMRQSPK*MVVVSPPPHPS Trigger: GCTAGGATGGGGAGGTGGGCTTACCACGACCATGCATTTTGGACTCTGCCTCATCCATATTGTGTGATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118544.8 ENSMUST00000152294.2 |
||
| 3UTR CCA 72 bp | TGGTATGCCTACGGAAGTCAGATCAAAGGACAACTTTaGGGATTCCGTGCGCTCCTCCCACTATGTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: WYAYGSQIKGQL*GFRALLPLCGS Trigger: GGACCCACATAGTGGGAGGAGCGCACGGAATCCCCAAAGTTGTCCTTTGATCTGACTTCCGTAGGCATACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| 3UTR CCA 72 bp | ATGTCACGGCACACCAGTCTTGGCTATGGAAGCATTTaGCACAGCAGCTGGCATGAAGCTCAGGCTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MSRHTSLGYGSI*HSSWHEAQAFS Trigger: GCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTGCCAAATGCTTCCATAGCCAAGACTGGTGTGCCGTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | ATCTACGAGGGAGCAGAAAGACAGGAGACAACCGGCTaGCCCCTCCCCTTTAGGATATGTATGGGACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IYEGAERQETTG*PLPFRICMGQR Trigger: CCTTTGTCCCATACATATCCTAAAGGGGAGGGGTCAGCCGGTTGTCTCCTGTCTTTCTGCTCCCTCGTAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | TCTTGGCTATGGAAGCATTTGGCACAGCAGCTGGCATaGAGCTCAGGCTTTCAGCACTTGCCTGGAATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SWLWKHLAQQLA*SSGFQHLPGMP Trigger: AGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTGCCAAATGCTTCCATAGCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | TTCAGGTCTGAGGTAATTCTGTGTGTTCAAGCATCATaGACACGCCTCCCGGGAGAGCTCGTACAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: FRSEVILCVQAS*TRLPGELVQGM Trigger: CATGCCTTGTACGAGCTCTCCCGGGAGGCGTGTGCATGATGCTTGAACACACAGAATTACCTCAGACCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | ACACTTAACAGTCACCTCCACTCAACAGTCTGCTGCTaGAGACTGACGCTGGGCTCATCTGGACATCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLNSHLHSTVCC*RLTLGSSGHHC Trigger: ACAGTGATGTCCAGATGAGCCCAGCGTCAGTCTGCAGCAGCAGACTGTTGAGTGGAGGTGACTGTTAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | CGGAAGTCAGATCAAAGGACAACTTTGGGGATTCCGTaGGCTCCTCCCACTATGTGGGTCCTTCCATTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKSDQRTTLGIP*APPTMWVLPFW Trigger: CCAAAATGGAAGGACCCACATAGTGGGAGGAGCGCACGGAATCCCCAAAGTTGTCCTTTGATCTGACTTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| 3UTR GCA 72 bp | GCAGACCAACCTGAAGCTCGCACTTTAATGTCCTTATaGTACAGAGAGGTGCAGGGTGGAAGCCACTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ADQPEARTLMSL*YREVQGGSHSE Trigger: CTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATAAGGACATTAAAGTGCGAGCTTCAGGTTGGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CCA 72 bp | CAGAGGGAAATCTGCAGGAGTTTAAAGAACTCATCCTaGATCTGCTCTTCCCTGAGGCCTTTGACGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QREICRSLKNSS*ICSSLRPLTGF Trigger: GAAGCCCGTCAAAGGCCTCAGGGAAGAGCAGATCCAGGATGAGTTCTTTAAACTCCTGCAGATTTCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
||
| 3UTR TCA 72 bp | GGTGGAAGCCACTCAGAGCCTGATGGAACGGAAAGGTaGACTTCCATTTTCTGTCACCCATCAGCTTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GGSHSEPDGTER*TSIFCHPSASY Trigger: ATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCTTTCCGTTCCATCAGGCTCTGAGTGGCTTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | GGGAGACTCAGAATGTTCTCTGCAACCAGGAACTCCTaGGTGGCGTCAAAGTGGCCCATCAAACTGCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: GRLRMFSATRNS*VASKWPIKLQY Trigger: ATATTGCAGTTTGATGGGCCACTTTGACGCCACTCAGGAGTTCCTGGTTGCAGAGAACATTCTGAGTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | AAAACAACACTTAACAGTCACCTCCACTCAACAGTCTaGTGCTGCAGACTGACGCTGGGCTCATCTGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: KTTLNSHLHSTV*CCRLTLGSSGH Trigger: ATGTCCAGATGAGCCCAGCGTCAGTCTGCAGCAGCAGACTGTTGAGTGGAGGTGACTGTTAAGTGTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGTGTGAGATGGAGACTGAGCTCAGCCTGGCAGTGTCTAAAACAACACTTATGTCCAGTTTGTGCTTaGACCCATTCCACAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HSVRWRLSSAWQCLKQHLCPVCA*THSTGQ Trigger: TTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACA...TAAGTGTTGTTTTAGACACTGCCAGGCTGAGCTCAGTCTCCATCTCACACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | TCCCTGCATCCCATATGTGGAAGGAGAGACAACCCCTaGAATTTGTTTTCTGACCACCACATGTACACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLHPICGRRDNP*NLFSDHHMYTV Trigger: CACAGTGTACATGTGGTGGTCAGAAAACAAATTGCAGGGGTTGTCTCTCCTTCCACATATGGGATGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CCA 72 bp | GAACTTCAGGCTTCTCTTAGGACAAGAAGACAACTCTaGCCTTATCTACGAGGGAGCAGAAAGACAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ELQASLRTRRQL*PYLRGSRKTGD Trigger: GTCTCCTGTCTTTCTGCTCCCTCGTAGATAAGGCCAGAGTTGTCTTCTTGTCCTAAGAGAAGCCTGAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | TTATTTATTTACCGAGGGTGCTCATGTGACGTGGTATaGCTACGGAAGTCAGATCAAAGGACAACTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFIYRGCSCDVV*LRKSDQRTTLG Trigger: CCCCAAAGTTGTCCTTTGATCTGACTTCCGTAGGCATACCACGTCACATGAGCACCCTCGGTAAATAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| 3UTR GCA 72 bp | CAGGTGGACATGGACTCCAGATTGCTGCTCTTCATGTaGTCAACTATCCAATTAAAGTCATGCTCAGTAACG | + |
|
Preference number: 3 (lower is better) Translates to: QVDMDSRLLLFM*STIQLKSCSVT Trigger: CGTTACTGAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGAGTCCATGTCCACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118544.8 ENSMUST00000152294.2 |
||
| 3UTR TCA 72 bp | ATACGGCTTGAAAAGAGATCACTGTTCCCTATGAGCTaGACGAACTTCAGGCTTCTCTTAGGACAAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IRLEKRSLFPMS*TNFRLLLGQED Trigger: GTCTTCTTGTCCTAAGAGAAGCCTGAAGTTCGTTCAGCTCATAGGGAACAGTGATCTCTTTTCAAGCCGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | CACCATACCCAGCTATCACTTTTAAAGTTAGAAAAATaGCTAGGTACTATGGCACGTGGCTACATTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HHTQLSLLKLEK*LGTMARGYIPS Trigger: GCTGGGAATGTAGCCACGTGCCATAGTACCTAGGCATTTTTCTAACTTTAAAAGTGATAGCTGGGTATGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCACACTTATTCCCCCAGAGGGAAATCTGCAGGAGTTTAAAGAACTCATCCTGAAGAAGTTCTCCTCTTaGCTTTCCTTAAACACGTCG | + |
|
Preference number: 3 (lower is better) Translates to: ITLIPPEGNLQEFKELILKKFSS*LSLNTS Trigger: CGACGTGTTTAAGGAAAGCAAAGAGGAGAACTTCTT...CAGGATGAGTTCTTTAAACTCCTGCAGATTTCCCTCTGGGGGAATAAGTGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
||
| 3UTR GCA 72 bp | GTACTTCGTCAGTCACTCTTTACGATGTCCAGTTTGTaGTTTGACCCATTCCACAGGCCAATCAAAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: VLRQSLFTMSSL*FDPFHRPIKIQ Trigger: TTGTATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGAAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR GCA 72 bp | CTGCTCTTCATGTGCTCAACTATCCAATTAAAGTCATaGTCAGTAACGTCAGACACAAACCATGGGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLFMCSTIQLKS*SVTSDTNHGML Trigger: AAGCATCCCATGGTTTGTGTCTGACGTTACTGAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118544.8 ENSMUST00000152294.2 |
||
| 3UTR TCA 72 bp | TCGTCAGTCACTCTTTACGATGTCCAGTTTGTGCTTTaGCCCATTCCACAGGCCAATCAAAATACAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSVTLYDVQFVL*PIPQANQNTNL Trigger: TAGATTTGTATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR TCA 72 bp | CTAATTACATTTATTTATTTACCGAGGGTGCTCATGTaGCGTGGTATGCCTACGGAAGTCAGATCAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LITFIYLPRVLM*RGMPTEVRSKD Trigger: GTCCTTTGATCTGACTTCCGTAGGCATACCACGTCACATGAGCACCCTCGGTAAATAAATAAATGTAATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| 3UTR CCA 72 bp | CCTATGTCTACAAAAGTGTTTAGCATAGTAGGTTCGTaGACAGTCACAGACCTATACGGCTTGAAAAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PMSTKVFSIVGS*TVTDLYGLKRD Trigger: ATCTCTTTTCAAGCCGTATAGGTCTGTGACTGTCCACGAACCTACTATGCTAAACACTTTTGTAGACATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAAGTCATGCTCAGTAACGTCAGACACAAACCATGGGATGCTTTTCCCATGAAAGTTCTCTTTCTTTaGAAATCTCAGGCTACCATG | + |
|
Preference number: 3 (lower is better) Translates to: IKVMLSNVRHKPWDAFPMKVLFL*KSQATM Trigger: CATGGTAGCCTGAGATTTCAAAAGAAAGAGAACTTT...CATGGGAAAAGCATCCCATGGTTTGTGTCTGACGTTACTGAGCATGACTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CCA 72 bp | TTCCAATTTGTTTTGAAACAAAGTACCCTGAATTTATaGACTGTCACAACATCTGAGGTGAGGGACACACAG | + |
|
Preference number: 3 (lower is better) Translates to: FQFVLKQSTLNL*TVTTSEVRDTQ Trigger: CTGTGTGTCCCTCACCTCAGATGTTGTGACAGTCCATAAATTCAGGGTACTTTGTTTCAAAACAAATTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATCTACGAGGGAGCAGAAAGACAGGAGACAACCGGCTGACCCCTCCCCTTGCATCGATGGAGCCCTaGGACTCGAAGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PYLRGSRKTGDNRLTPPLASMEP*DSKKFS Trigger: GGAGAACTTCTTCGAGTCGCAGGGCTCCATCGATGC...AAGGGGAGGGGTCAGCCGGTTGTCTCCTGTCTTTCTGCTCCCTCGTAGATAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR CCA 90 bp | ACGCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAATTCCATACCTGCCAGTaGTCAGCCAGTGGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPGRARTRHVFTGPLTQFHTCQ*SASGDQ Trigger: CTGATCCCCACTGGCTGACCACTGGCAGGTATGGAA...TTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR TCA 90 bp | ACGCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAATACAAACAACCAGGGTaGGAAGAACCAGCGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPGRARTRHVFTGPLTQYKQPG*EEPAWL Trigger: GAGCCACGCTGGTTCTTCTCACCCTGGTTGTTTGTA...TTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR TCA 90 bp | CACAGCAGCTGGCATGAAGCTCAGGCTTTCAGCACTTGCCTGGAATGCCTGAGGTACAAACAACCAGGGTaGGAAGAACCAGCGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSWHEAQAFSTCLECLRYKQPG*EEPAWL Trigger: GAGCCACGCTGGTTCTTCTCACCCTGGTTGTTTGTA...CCTCAGGCATTCCAGGCAAGTGCTGAAAGCCTGAGCTTCATGCCAGCTGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCATGTGTTCACTGGGCCACTAACTCAAGAGCCAAACCAAGTGCAATAACATCAGAGGCCGTGAGCTaGTCCGCCTGCCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KACVHWATNSRAKPSAITSEAVS*SACPGC Trigger: GCAGCCTGGGCAGGCGGAGCAGCTCACGGCCTCTGA...TGTTATTGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| 3UTR CAA 72 bp | CCTTCTGGGCCCTTCAACCCATCTCAGGTCATCCATTaGCCCCCAGTATCACAAGTACTAAGCTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGPFNPSQVIH*PPVSQVLSWVW Trigger: CCACACCCAGCTTAGTACTTGTGATACTGGGGGCAAATGGATGACCTGAGATGGGTTGAAGGGCCCAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CAA 72 bp | AAGAACTCATCCTGGATCTGCTCTTCCCTGAGGCCTTaGACGGGCTTCAGCTGCAGCAGGTGTGAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNSSWICSSLRP*TGFSCSRCEHR Trigger: TCTGTGTTCACACCTGCTGCAGCTGAAGCCCGTCAAAGGCCTCAGGGAAGAGCAGATCCAGGATGAGTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152294.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGTAACAGAATTGGCCACCAAACCTGATGGCCTGGACTCAGTCCCTGCATTGGCGGACTCTGCATaGTGGCTTCATGAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQVTELATKPDGLDSVPALADSA*WLHEFS Trigger: GGAGAATTCATGAAGCCATCATGCAGAGTCCGCCAA...TGCAGGGACTGAGTCCAGGCCATCAGGTTTGGTGGCCAATTCTGTTACCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGTTCTCTGCACAGCTGCAGCAGGTGTaGACACAGAGCATCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLNPCTEAEGRLRMFSAQLQQV*TQSIDG Trigger: TCCATCGATGCTCTGTGTTCACACCTGCTGCAGCTG...TGCAGAGAACATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAAGCCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGAAGCCACTCAGAGCCTaGTGGAACGGAAAGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EEKPGLNPCTEAEGRLRMKPLRA*WNGKVN Trigger: GTTCACCTTTCCGTTCCATCAGGCTCTGAGTGGCTT...CATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGGCTTCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCAGATCAAAGGACAACTTTGGGGATTCCGTGCGCTCCTCCCACTATGTTACAAACAACCAGGGTaGGAAGAACCAGCGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSQIKGQLWGFRALLPLCYKQPG*EEPAWL Trigger: GAGCCACGCTGGTTCTTCTCACCCTGGTTGTTTGTA...ACATAGTGGGAGGAGCGCACGGAATCCCCAAAGTTGTCCTTTGATCTGACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAAGCCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGTTGGCGGACTCTGCATaGTGGCTTCATGAATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEKPGLNPCTEAEGRLRMLADSA*WLHEFS Trigger: GGAGAATTCATGAAGCCATCATGCAGAGTCCGCCAA...CATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGGCTTCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | TCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAGCCAAACCAAGTGCAGCATCGATGGAGCCCTaGGACTCGAAGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYKACVHWATNSRAKPSAASMEP*DSKKFS Trigger: GGAGAACTTCTTCGAGTCGCAGGGCTCCATCGATGC...TGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAAGCCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGCACCAAGGGGGTGATTaGTTTGTCTGTCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEKPGLNPCTEAEGRLRMHQGGD*FVCLQF Trigger: GAACTGCAGACAGACAAACCAATCACCCCCTTGGTG...CATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGGCTTCTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAAACCATTCCAAGGAAGCCTCGTCTACTGTACGTAAGATACACAGGAGCTTTGACGGGCTTCAGCTaGAGCAGGTGTGAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQTIPRKPRLLYVRYTGALTGFS*SRCEHR Trigger: TCTGTGTTCACACCTGCTGCAGCTGAAGCCCGTCAA...AGCTCCTGTGTATCTTACGTACAGTAGACGAGGCTTCCTTGGAATGGTTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | TCACACAATATGGATGAGGCAGAGTCCAAAATGCATGGTCGTGGTAAGCCCACCTTGACGGGCTTCAGCTaGAGCAGGTGTGAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHNMDEAESKMHGRGKPTLTGFS*SRCEHR Trigger: TCTGTGTTCACACCTGCTGCAGCTGAAGCCCGTCAA...GGTGGGCTTACCACGACCATGCATTTTGGACTCTGCCTCATCCATATTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGTTCTCTGCAAGGCAGAGTCCAAAATaGATGGTCGTGGTAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLNPCTEAEGRLRMFSARQSPK*MVVVSP Trigger: TGGGCTTACCACGACCATGCATTTTGGACTCTGCCT...TGCAGAGAACATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCAGATCAAAGGACAACTTTGGGGATTCCGTGCGCTCCTCCCACTATGTCACCAAGGGGGTGATTaGTTTGTCTGTCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSQIKGQLWGFRALLPLCHQGGD*FVCLQF Trigger: GAACTGCAGACAGACAAACCAATCACCCCCTTGGTG...ACATAGTGGGAGGAGCGCACGGAATCCCCAAAGTTGTCCTTTGATCTGACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCCTCGTCTACTGTACGTAAGATACACAGGAGCTGAGGAAAGGGGCTGCACTACTTTCTCCACCTaGGAGAGACAGATCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RKPRLLYVRYTGAEERGCTTFST*ERQITL Trigger: AAGTGTGATCTGTCTCTCTCAGGTGGAGAAAGTAGT...GCAGCCCCTTTCCTCAGCTCCTGTGTATCTTACGTACAGTAGACGAGGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCCTCGTCTACTGTACGTAAGATACACAGGAGCTGAGGAAAGGGGCTGCCCCCAGAGGGAAATCTaGAGGAGTTTAAAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKPRLLYVRYTGAEERGCPQREI*RSLKNS Trigger: TGAGTTCTTTAAACTCCTGCAGATTTCCCTCTGGGG...GCAGCCCCTTTCCTCAGCTCCTGTGTATCTTACGTACAGTAGACGAGGCTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAACACAAACCATGGGATaGTTTTCCCATGGAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASRESSYKACVHWATNSRTQTMG*FSHGNE Trigger: TTCATTTCCATGGGAAAAGCATCCCATGGTTTGTGT...TCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAAGCCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGACATGGACTCCAGATTaGTGCTCTTCATGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEKPGLNPCTEAEGRLRMTWTPD*CSSCAQ Trigger: TTGAGCACATGAAGAGCAGCAATCTGGAGTCCATGT...CATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGGCTTCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | CACAGTGTGAGATGGAGACTGAGCTCAGCCTGGCAGTGTCTAAAACAACACTTATATGCTACAGAGAGGTaGAGGGTGGAAGCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSVRWRLSSAWQCLKQHLYATER*RVEATQ Trigger: CTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATA...TAAGTGTTGTTTTAGACACTGCCAGGCTGAGCTCAGTCTCCATCTCACACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCCTCGTCTACTGTACGTAAGATACACAGGAGCTGAGGAAAGGGGCTGCCTTTTCCCATGGAAATaGATCTCAGTAGCTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKPRLLYVRYTGAEERGCLFPWK*ISVANS Trigger: GGAGTTAGCTACTGAGATTCATTTCCATGGGAAAAG...GCAGCCCCTTTCCTCAGCTCCTGTGTATCTTACGTACAGTAGACGAGGCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | ACGCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAATAAGATGTGCCTTTTaGAGTTCAGCGTATAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPPGRARTRHVFTGPLTQIRCAF*SSAYKS Trigger: TGACTTATACGCTGAACTGCAAAAGGCACATCTTAT...TTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCATGTGACGTGGTATGCCTACGGAAGTCAGATCAAAGGACAACTTTGGTACTGGCTGTACACTTaGCTCTGCATGATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAHVTWYAYGSQIKGQLWYWLYT*LCMMAS Trigger: TGAAGCCATCATGCAGAGGCAAGTGTACAGCCAGTA...CCAAAGTTGTCCTTTGATCTGACTTCCGTAGGCATACCACGTCACATGAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAAACCATTCCAAGGAAGCCTCGTCTACTGTACGTAAGATACACAGGAGCTGATGGAACGGAAAGGTaGACTTCCATTTTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQTIPRKPRLLYVRYTGADGTER*TSIFCH Trigger: GTGACAGAAAATGGAAGTTCACCTTTCCGTTCCATC...AGCTCCTGTGTATCTTACGTACAGTAGACGAGGCTTCCTTGGAATGGTTTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | ACGCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAATTGGTTTGTCTGTCTaGAGTTCATTCCGTAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPPGRARTRHVFTGPLTQIGLSV*SSFRNL Trigger: TAAATTACGGAATGAACTGCAGACAGACAAACCAAT...TTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGTTCTCTGCAACTTTAATGTCCTTATaGTACAGAGAGGTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLNPCTEAEGRLRMFSATLMSL*YREVQG Trigger: ACCCTGCACCTCTCTGTAGCATAAGGACATTAAAGT...TGCAGAGAACATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | TCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAGCCAAACCAAGTGCAAGTGGCCCATCAAACTaGAATATTCCATACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYKACVHWATNSRAKPSASGPSN*NIPYLP Trigger: TGGCAGGTATGGAATATTGCAGTTTGATGGGCCACT...TGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR CCA 90 bp | TCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAGCCAAACCAAGTGCAGTCAGACACAAACCATaGGATGCTTTTCCCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYKACVHWATNSRAKPSAVRHKP*DAFPME Trigger: TTCCATGGGAAAAGCATCCCATGGTTTGTGTCTGAC...TGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR CCA 90 bp | GGGCAAACCATTCCAAGGAAGCCTCGTCTACTGTACGTAAGATACACAGGAGCTGGGCATCACACAATATaGATGAGGCAGAGTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQTIPRKPRLLYVRYTGAGHHTI*MRQSPK Trigger: TTTTGGACTCTGCCTCATCCATATTGTGTGATGCCC...AGCTCCTGTGTATCTTACGTACAGTAGACGAGGCTTCCTTGGAATGGTTTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR TCA 90 bp | ACTATCCAATTAAAGTCATGCTCAGTAACGTCAGACACAAACCATGGGATGCTTCAGCTGCAGCAGGTGTaGACACAGAGCATCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIQLKSCSVTSDTNHGMLQLQQV*TQSIDG Trigger: TCCATCGATGCTCTGTGTTCACACCTGCTGCAGCTG...AAGCATCCCATGGTTTGTGTCTGACGTTACTGAGCATGACTTTAATTGGATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGTCAGATCAAAGGACAACTTTGGGGATTCCGTGCGCTCCTCCCACTATGTCTTTTCAGCTTCAATaGCTTCCTCTCCATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKSDQRTTLGIPCAPPTMSFQLQ*LPLHVF Trigger: AAAAACATGGAGAGGAAGGCATTGAAGCTGAAAAGA...CATAGTGGGAGGAGCGCACGGAATCCCCAAAGTTGTCCTTTGATCTGACTTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCCAGATTGCTGCTCTTCATGTGCTCAACTATCCAATTAAAGTCATGCTCCACCAAGGGGGTGATTaGTTTGTCTGTCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLQIAALHVLNYPIKVMLHQGGD*FVCLQF Trigger: GAACTGCAGACAGACAAACCAATCACCCCCTTGGTG...GAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CAA 72 bp | CATCCCATATGTGGAAGGAGAGACAACCCCTGCAATTaGTTTTCTGACCACCACATGTACACTGTGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPICGRRDNPCN*FSDHHMYTVAR Trigger: TCTTGCCACAGTGTACATGTGGTGGTCAGAAAACAAATTGCAGGGGTTGTCTCTCCTTCCACATATGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| 3UTR CAA 72 bp | CACACACACACACACCACCACCACCACCACCACACATaGTCCAGAGAAATTCTACTCTCCTTTATATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHHHHHHHT*SREILLSFICT Trigger: AGTGCATATAAAGGAGAGTAGAATTTCTCTGGACAATGTGTGGTGGTGGTGGTGGTGGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTGTGAGATGGAGACTGAGCTCAGCCTGGCAGTGTCTAAAACAACACTTAATCACACAATATGGATaGGGCAGAGTCCAAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSVRWRLSSAWQCLKQHLITQYG*GRVQNA Trigger: TGCATTTTGGACTCTGCCTCATCCATATTGTGTGAT...TAAGTGTTGTTTTAGACACTGCCAGGCTGAGCTCAGTCTCCATCTCACACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTAAATCCATGCACTGAGGCTGAAGGGAGACTCAGAATGTTCTCTGCATCTTTTCAGCTTCAATaGCTTCCTCTCCATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLNPCTEAEGRLRMFSASFQLQ*LPLHVF Trigger: AAAAACATGGAGAGGAAGGCATTGAAGCTGAAAAGA...TGCAGAGAACATTCTGAGTCTCCCTTCAGCCTCAGTGCATGGATTTAGGCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| 3UTR CAA 72 bp | CTCGTACTTCGTCAGTCACTCTTTACGATGTCCAGTTaGTGCTTTGACCCATTCCACAGGCCAATCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LVLRQSLFTMSS*CFDPFHRPIKI Trigger: TATTTTGATTGGCCTGTGGAATGGGTCAAAGCACAAACTGGACATCGTAAAGAGTGACTGACGAAGTACGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | TTCAACCCATCTCAGGTCATCCATTTGCCCCCAGTATCACAAGTACTAAGCTGGTCTTTTCAGCTTCAATaGCTTCCTCTCCATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNPSQVIHLPPVSQVLSWSFQLQ*LPLHVF Trigger: AAAAACATGGAGAGGAAGGCATTGAAGCTGAAAAGA...CCAGCTTAGTACTTGTGATACTGGGGGCAAATGGATGACCTGAGATGGGTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCATGTGACGTGGTATGCCTACGGAAGTCAGATCAAAGGACAACTTTGGATTGGTTTGTCTGTCTaGAGTTCATTCCGTAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GAHVTWYAYGSQIKGQLWIGLSV*SSFRNL Trigger: TAAATTACGGAATGAACTGCAGACAGACAAACCAAT...CCAAAGTTGTCCTTTGATCTGACTTCCGTAGGCATACCACGTCACATGAGCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| 3UTR CAA 72 bp | AGGAGCAATGAGCTGGCATGTAAAGTTCTCTTTCTTTaGAAATCTCAGGCTACCATGATGACCGTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSNELACKVLFL*KSQATMMTVQF Trigger: GAACTGAACGGTCATCATGGTAGCCTGAGATTTCAAAAGAAAGAGAACTTTACATGCCAGCTCATTGCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCATGTGTTCACTGGGCCACTAACTCAAGAGCCAAACCAAGTGCAATAACATTGCTGCTCTTCATGTaGTCAACTATCCAATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KACVHWATNSRAKPSAITLLLFM*STIQLK Trigger: CTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAA...TGTTATTGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095893.11 |
||
| CDS-3UTR GCA 90 bp | ACTATCCAATTAAAGTCATGCTCAGTAACGTCAGACACAAACCATGGGATGCTTTACTCTTTGTATACCTaGAGGAGTTTAAAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIQLKSCSVTSDTNHGMLYSLYT*RSLKNS Trigger: TGAGTTCTTTAAACTCCTGCAGGTATACAAAGAGTA...AAGCATCCCATGGTTTGTGTCTGACGTTACTGAGCATGACTTTAATTGGATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCACCTCCCCATCCTAGCATAGGCCTCCCAGCAGGCCCCACAGGTGGACATTGCGTGGAGTACTCTTaGTATACCTGCAGGAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPPPHPSIGLPAGPTGGHCVEYS*YTCRSL Trigger: TAAACTCCTGCAGGTATACAAAGAGTACTCCACGCA...ATGTCCACCTGTGGGGCCTGCTGGGAGGCCTATGCTAGGATGGGGAGGTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCGGGAGAGCTCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAAATGTATCAATAACCTaGGTTAAGATCTGCGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASRESSYKACVHWATNSRNVSIT*VKICGV Trigger: AACACCGCAGATCTTAACCAAGGTTATTGATACATT...TCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGAGCTCTCCCGGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGAAGTCAGATCAAAGGACAACTTTGGGGATTCCGTGCGCTCCTCCCACTAATGTATCAATAACCTaGGTTAAGATCTGCGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRKSDQRTTLGIPCAPPTNVSIT*VKICGV Trigger: AACACCGCAGATCTTAACCAAGGTTATTGATACATT...AGTGGGAGGAGCGCACGGAATCCCCAAAGTTGTCCTTTGATCTGACTTCCGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117489.8 |
||
| CDS-3UTR CAA 90 bp | TCGTACAAGGCATGTGTTCACTGGGCCACTAACTCAAGAGCCAAACCAAGTGCAAAGAAGTTCTCCTCTTaGCTTTCCTTAAACACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SYKACVHWATNSRAKPSAKKFSS*LSLNTS Trigger: CGACGTGTTTAAGGAAAGCAAAGAGGAGAACTTCTT...TGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS CCA 90 bp | GAAGTTCTCCTCTTTGCTTTCCTTAAACACGTCGAAGTCATGGATTaGCGGACTCTGCATGATGGCTTCATGAATTCTCCGATACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: EVLLFAFLKHVEVMD*RTLHDGFMNSPIHV Trigger: TACATGTATCGGAGAATTCATGAAGCCATCATGCAGAGTCCGCCAATCCATGACTTCGACGTGTTTAAGGAAAGCAAAGAGGAGAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS GCA 90 bp | GTGTCAACACACTTGTCCACCAAGGGGGTGATTGGTTTGTCTGTCTaGAGTTCATTCCGTAATTTAGAAAGAAGAGAGATGGCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSTHLSTKGVIGLSV*SSFRNLERREMAFF Trigger: AAAGAAAGCCATCTCTCTTCTTTCTAAATTACGGAATGAACTGCAGACAGACAAACCAATCACCCCCTTGGTGGACAAGTGTGTTGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 |
||
| CDS GCA 90 bp | TCACTTTTATGTCGATGCAATGTATCAATAACCTTGGTTAAGATCTaGGGTGTTCTGTCCTTAATCGTAAGATATGCAAAGGACCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLLCRCNVSITLVKI*GVLSLIVRYAKDPS Trigger: CGAGGGGTCCTTTGCATATCTTACGATTAAGGACAGAACACCGCAGATCTTAACCAAGGTTATTGATACATTGCATCGACATAAAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 ENSMUST00000152294.2 |
||
| CDS-3UTR CAA 90 bp | GGACTCCAGATTGCTGCTCTTCATGTGCTCAACTATCCAATTAAAGTCATGCTCAATGTATCAATAACCTaGGTTAAGATCTGCGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLQIAALHVLNYPIKVMLNVSIT*VKICGV Trigger: AACACCGCAGATCTTAACCAAGGTTATTGATACATT...GAGCATGACTTTAATTGGATAGTTGAGCACATGAAGAGCAGCAATCTGGAGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118544.8 ENSMUST00000152294.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTCCGCCAATACTAAATCCGTAATCAGTTCAAAGCCAGAATTATCCAGAAAGAAGTTCTCCTCTTaGCTTTCCTTAAACACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KKSANTKSVISSKPELSRKKFSS*LSLNTS Trigger: CGACGTGTTTAAGGAAAGCAAAGAGGAGAACTTCTT...TCTGGATAATTCTGGCTTTGAACTGATTACGGATTTAGTATTGGCGGACTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118544.8 |
||
| CDS TCA 72 bp | TCTCCGATACATGTAGCACTCTACAAACAACCAGGGTaGGAAGAACCAGCGTGGCTCCCCATCGCCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SPIHVALYKQPG*EEPAWLPIAFI Trigger: AATGAAGGCGATGGGGAGCCACGCTGGTTCTTCTCACCCTGGTTGTTTGTAGAGTGCTACATGTATCGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 |
||
| CDS CAA 72 bp | TCGATGGAGCCCTGCGACTCGAAGAAGTTCTCCTCTTaGCTTTCCTTAAACACGTCGAAGTCATGGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SMEPCDSKKFSS*LSLNTSKSWIG Trigger: GCCAATCCATGACTTCGACGTGTTTAAGGAAAGCAAAGAGGAGAACTTCTTCGAGTCGCAGGGCTCCATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095893.11 ENSMUST00000118544.8 |
||
| CDS TCA 72 bp | ATATGTGGGTGTCAACACACTTGTCCACCAAGGGGGTaGTTGGTTTGTCTGTCTGCAGTTCATTCCGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: ICGCQHTCPPRG*LVCLSAVHSVI Trigger: AATTACGGAATGAACTGCAGACAGACAAACCAATCACCCCCTTGGTGGACAAGTGTGTTGACACCCACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 |
||
| CDS CAA 90 bp | CATATGTGGGTGTCAACACACTTGTCCACCAAGGGGGTGATTGGTTaGTCTGTCTGCAGTTCATTCCGTAATTTAGAAAGAAGAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: HMWVSTHLSTKGVIG*SVCSSFRNLERREM Trigger: CATCTCTCTTCTTTCTAAATTACGGAATGAACTGCAGACAGACAAACCAATCACCCCCTTGGTGGACAAGTGTGTTGACACCCACATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 |
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| CDS GCA 72 bp | CACTTGTCCACCAAGGGGGTGATTGGTTTGTCTGTCTaGAGTTCATTCCGTAATTTAGAAAGAAGAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: HLSTKGVIGLSV*SSFRNLERREM Trigger: CATCTCTCTTCTTTCTAAATTACGGAATGAACTGCAGACAGACAAACCAATCACCCCCTTGGTGGACAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 |
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| CDS CAA 72 bp | GTGTCAACACACTTGTCCACCAAGGGGGTGATTGGTTaGTCTGTCTGCAGTTCATTCCGTAATTTAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSTHLSTKGVIG*SVCSSFRNLER Trigger: TCTTTCTAAATTACGGAATGAACTGCAGACAGACAAACCAATCACCCCCTTGGTGGACAAGTGTGTTGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 |
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| CDS GCA 72 bp | TGTCGATGCAATGTATCAATAACCTTGGTTAAGATCTaGGGTGTTCTGTCCTTAATCGTAAGATATGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: CRCNVSITLVKI*GVLSLIVRYAK Trigger: CTTTGCATATCTTACGATTAAGGACAGAACACCGCAGATCTTAACCAAGGTTATTGATACATTGCATCGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 ENSMUST00000152294.2 |
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| CDS CAA 72 bp | AATTCACTTTTATGTCGATGCAATGTATCAATAACCTaGGTTAAGATCTGCGGTGTTCTGTCCTTAATCGTA | + |
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Preference number: 6 (lower is better) Translates to: NSLLCRCNVSIT*VKICGVLSLIV Trigger: TACGATTAAGGACAGAACACCGCAGATCTTAACCAAGGTTATTGATACATTGCATCGACATAAAAGTGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095893.11 ENSMUST00000117489.8 ENSMUST00000118544.8 ENSMUST00000152294.2 |
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