Pregenerated sensors for ARMH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039901Ensembl transcript IDs: ENSMUST00000045396.9
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCTTaGAGTCAGTCCCCACTCCTTGTGCTCGCCCTCCAGCCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TAFTTSLGVCASLQP*SQSPLLVLALQPRS Trigger: GCTCCTGGGCTGGAGGGCGAGCACAAGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 90 bp | GGGTCTGCGCTTCTCTCCAACCTTGAAGTCAGTCCCCACTCCTTGTaGTCGCCCTCCAGCCCAGGAGCCTCATGGGTAAGGCAGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: GSALLSNLEVSPHSL*SPSSPGASWVRQSV Trigger: CACTGACTGCCTTACCCATGAGGCTCCTGGGCTGGAGGGCGAGCACAAGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCGCAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | TGTGGCATCCGCCATGACCAGCCATCATCAGTCATGACCAGCCATTaGCCTCCAGAGTGCTGGCAGCAGCCTGGGCCTGTCCAACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: CGIRHDQPSSVMTSH*PPECWQQPGPVQPA Trigger: TGCTGGTTGGACAGGCCCAGGCTGCTGCCAGCACTCTGGAGGCCAATGGCTGGTCATGACTGATGATGGCTGGTCATGGCGGATGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR TCA 90 bp | AGGAAACAGGATGTGGCATCCGCCATGACCAGCCATCATCAGTCATaGCCAGCCATTGGCCTCCAGAGTGCTGGCAGCAGCCTGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: RKQDVASAMTSHHQS*PAIGLQSAGSSLGL Trigger: CAGGCCCAGGCTGCTGCCAGCACTCTGGAGGCCAATGGCTGGTCATGACTGATGATGGCTGGTCATGGCGGATGCCACATCCTGTTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 90 bp | CCAGGACGCCCCAGGCCTACTCTCAGCCTCCTCAGGTCCTCACTGTaGGGTTTGCCCCTGCCAACCTGGGACTTTACGAAGCTTTACATC | + |
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Preference number: 1 (lower is better) Translates to: PGRPRPTLSLLRSSL*GLPLPTWDFTKLYI Trigger: GATGTAAAGCTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGACCTGAGGAGGCTGAGAGTAGGCCTGGGGCGTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR TCA 90 bp | CCAAATAAGAGCATCCTGGGCTTGCCCCTGCTTGTCCAAGCTCACTaGAGTACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PNKSILGLPLLVQAH*STAFTTSLGVCASL Trigger: GAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCAGGATGCTCTTATTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 90 bp | TACCCTCCCATTTCTCCCCAAATAAGAGCATCCTGGGCTTGCCCCTaGTTGTCCAAGCTCACTGAAGTACGGCCTTCACCACGAGCCTCG | + |
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Preference number: 1 (lower is better) Translates to: YPPISPQIRASWACP*LSKLTEVRPSPRAS Trigger: CGAGGCTCGTGGTGAAGGCCGTACTTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCAGGATGCTCTTATTTGGGGAGAAATGGGAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | GCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTaGCTTCCAGGGAGGGCAAGGATTCCAGAGAGACGGATGCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: ANRFSRTITPLLSQG*LPGRARIPERRMLN Trigger: ATTCAGCATCCGTCTCTCTGGAATCCTTGCCCTCCCTGGAAGCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR TCA 90 bp | GGGCCTTGCTCAGGTTCAAAAGGAAACAGGATGTGGCATCCGCCATaGCCAGCCATCATCAGTCATGACCAGCCATTGGCCTCCAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: GPCSGSKGNRMWHPP*PAIISHDQPLASRV Trigger: CACTCTGGAGGCCAATGGCTGGTCATGACTGATGATGGCTGGTCATGGCGGATGCCACATCCTGTTTCCTTTTGAACCTGAGCAAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 90 bp | TGGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTaGCTCTCCCGTTACCCTCCCATTTCTCCCCAAATAAGAGCATCC | + |
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Preference number: 1 (lower is better) Translates to: WGSTQGMQPGNATLG*LSRYPPISPQIRAS Trigger: GGATGCTCTTATTTGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 90 bp | TCAATTGGCATCATGGGGCAGTACCCAGGGAATGCAGCCTGGAAATaGCACTCTTGGTTGCCTCTCCCGTTACCCTCCCATTTCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SIGIMGQYPGNAAWK*HSWLPLPLPSHFSP Trigger: TGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGATGCCAATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | AAATTCTTAGGCAGGCTGAATGTAAACAACAGCAGGGTGAGGGGGTaGAACACGTGGAGGAGCTCATCTAGGCTCCCACTGCAGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: KFLGRLNVNNSRVRG*NTWRSSSRLPLQGW Trigger: CCACCCCTGCAGTGGGAGCCTAGATGAGCTCCTCCACGTGTTCCACCCCCTCACCCTGCTGTTGTTTACATTCAGCCTGCCTAAGAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | ATCATGGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTaGTTGCCTCTCCCGTTACCCTCCCATTTCTCCCCAAATAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: IMGQYPGNAAWKCHS*LPLPLPSHFSPNKS Trigger: GCTCTTATTTGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | AAGGCAAGGCTAAAGTTGTGGGCCTATTGTGCTGACGAGTCAACGTaGGAAGGCAAGGGAAAGCGAACAGGTGCTCCTGGTGCCAAAACT | + |
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Preference number: 1 (lower is better) Translates to: KARLKLWAYCADEST*EGKGKRTGAPGAKT Trigger: AGTTTTGGCACCAGGAGCACCTGTTCGCTTTCCCTTGCCTTCCCACGTTGACTCGTCAGCACAATAGGCCCACAACTTTAGCCTTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | ACCTGTATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATaGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: TCIVRSQHVESQLAS*GSTQGMQPGNATLG Trigger: ACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTATACAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 90 bp | TTACATCGGAGGGACTTAGAGCAGCAGCTATTTCAGGGGGAGCTGTaGGGAAGGGAAAACCCTACAGTGGTTCCATGGAGACCATCCAAT | + |
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Preference number: 1 (lower is better) Translates to: LHRRDLEQQLFQGEL*GRENPTVVPWRPSN Trigger: ATTGGATGGTCTCCATGGAACCACTGTAGGGTTTTCCCTTCCCCACAGCTCCCCCTGAAATAGCTGCTGCTCTAAGTCCCTCCGATGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CAA 90 bp | TACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCTaGAAGTCAGTCCCCACTCCTTGTGCTCGCCCTCCAGCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YGLHHEPRGLRFSPT*KSVPTPCARPPAQE Trigger: CTCCTGGGCTGGAGGGCGAGCACAAGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CAA 90 bp | TCGGGGTCTGCGCTTCTCTCCAACCTTGAAGTCAGTCCCCACTCCTaGTGCTCGCCCTCCAGCCCAGGAGCCTCATGGGTAAGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SGSALLSNLEVSPHS*CSPSSPGASWVRQS Trigger: TGACTGCCTTACCCATGAGGCTCCTGGGCTGGAGGGCGAGCACAAGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCGCAGACCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR GCA 90 bp | ACATCGGAGGGACTTAGAGCAGCAGCTATTTCAGGGGGAGCTGTGGGGAAGGGACATTGGCCTCCAGAGTaGTGGCAGCAGCCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TSEGLRAAAISGGAVGKGHWPPE*WQQPGP Trigger: AGGCCCAGGCTGCTGCCAGCACTCTGGAGGCCAATG...TCCCTTCCCCACAGCTCCCCCTGAAATAGCTGCTGCTCTAAGTCCCTCCGATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CCA 90 bp | TATTGTGCTGACGAGTCAACGTGGGAAGGCAAGGGAAAGCGAACAGGTGCTCCTTGGCCTCCAGAGTGCTaGCAGCAGCCTGGGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: YCADESTWEGKGKRTGAPWPPEC*QQPGPV Trigger: GACAGGCCCAGGCTGCTGCCAGCACTCTGGAGGCCA...AGGAGCACCTGTTCGCTTTCCCTTGCCTTCCCACGTTGACTCGTCAGCACAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTGGCACTCTGTGCCAGAGCTaGGGTGCTAAGGACTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SVPTGSRERSHLCSVRAGTLCQS*GAKDWA Trigger: TGCCCAGTCCTTAGCACCTCAGCTCTGGCACAGAGT...GCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGCACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCAGCACCAGACCACAGCAGGAACAGATTCCTCCCCAGAGGAAATTCTTAGTCCCCACTCCTTGTaGTCGCCCTCCAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LCQHQTTAGTDSSPEEILSPHSL*SPSSPG Trigger: TCCTGGGCTGGAGGGCGAGCACAAGGAGTGGGGACT...AAGAATTTCCTCTGGGGAGGAATCTGTTCCTGCTGTGGTCTGGTGCTGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTGGCAGCCATCATCAGTCATaGCCAGCCATTGGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SVPTGSRERSHLCSVRAGSHHQS*PAIGLQ Trigger: CTGGAGGCCAATGGCTGGTCATGACTGATGATGGCT...GCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGCACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CAA 90 bp | ATGGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTaGCCTCTCCCGTTACCCTCCCATTTCTCCCCAAATAAGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: MGQYPGNAAWKCHSW*PLPLPSHFSPNKSI Trigger: GATGCTCTTATTTGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGGGGTTTATCACCATGGGAAACACTAAAGCCTCAGGTCAAGTTATCCATGTGCTGGCAGCAGCCTaGGCCTGTCCAACCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: ALGFITMGNTKASGQVIHVLAAA*ACPTST Trigger: GGTGCTGGTTGGACAGGCCCAGGCTGCTGCCAGCAC...ATGGATAACTTGACCTGAGGCTTTAGTGTTTCCCATGGTGATAAACCCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATGGGGCAGTACCCAGAATGCAGCCTGGAAATaGCACTCTTGGTTGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IVRSQHVESQLASWGSTQNAAWK*HSWLPL Trigger: GAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATT...CTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCGAACAGGTGCTCCTGGTGCCAAAACTAAAATCCAGAAAGGAGCGGTCGGATCTCAATTGGCATCATaGGGCAGTACCCAGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: KRTGAPGAKTKIQKGAVGSQLAS*GSTQGM Trigger: CATTCCCTGGGTACTGCCCCATGATGCCAATTGAGA...TCCGACCGCTCCTTTCTGGATTTTAGTTTTGGCACCAGGAGCACCTGTTCGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR GCA 90 bp | GACCCACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACTCCTGGGCTTGCCCCTaGTTGTCCAAGCTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: DPPYNGLRFYIYACQCANSWACP*LSKLTE Trigger: TTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCAGGA...GTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGTGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACAGGTTCCCCAGCAGGTTCTCTaGCAGCACCAGACCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: TLQWLKILHLCMSVCQQVPQQVL*QHQTTA Trigger: TGCTGTGGTCTGGTGCTGGCAGAGAACCTGCTGGGG...AACCTGTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGGAAAGGGGACCAGCAAAGTAGGCACCTTGAGGGCTCCAGAAAGCCTGGTCAGTCCCCACTCCTaGTGCTCGCCCTCCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: AAGKGTSKVGTLRAPESLVSPHS*CSPSSP Trigger: TGGGCTGGAGGGCGAGCACAAGGAGTGGGGACTGAC...CAGGCTTTCTGGAGCCCTCAAGGTGCCTACTTTGCTGGTCCCCTTTCCAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR TCA 72 bp | ACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCTTaGAGTCAGTCCCCACTCCTTGTGCTCGCCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TTSLGVCASLQP*SQSPLLVLALQ Trigger: CTGGAGGGCGAGCACAAGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR TCA 72 bp | AGCATCCTGGGCTTGCCCCTGCTTGTCCAAGCTCACTaGAGTACGGCCTTCACCACGAGCCTCGGGGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: SILGLPLLVQAH*STAFTTSLGVC Trigger: GCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCAGGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 72 bp | CCCAGGCCTACTCTCAGCCTCCTCAGGTCCTCACTGTaGGGTTTGCCCCTGCCAACCTGGGACTTTACGAAG | + |
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Preference number: 3 (lower is better) Translates to: PRPTLSLLRSSL*GLPLPTWDFTK Trigger: CTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGACCTGAGGAGGCTGAGAGTAGGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 72 bp | AGGGAGGGCAAGGATTCCAGAGAGACGGATGCTGAATaGACAGGAGCCCAGGACGCCCCAGGCCTACTCTCA | + |
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Preference number: 3 (lower is better) Translates to: REGKDSRETDAE*TGAQDAPGLLS Trigger: TGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTCTCTGGAATCCTTGCCCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | TCATCAGTCATGACCAGCCATTGGCCTCCAGAGTGCTaGCAGCAGCCTGGGCCTGTCCAACCAGCACCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SSVMTSHWPPEC*QQPGPVQPAPV Trigger: TACAGGTGCTGGTTGGACAGGCCCAGGCTGCTGCCAGCACTCTGGAGGCCAATGGCTGGTCATGACTGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | ACGGAGGTTGGATGTGCCCAAGGCCCAGCTAGAATATaGCTAGACAAGATGGAGGCTGGGGGCGTGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TEVGCAQGPARI*LDKMEAGGVVL Trigger: GAGCACCACGCCCCCAGCCTCCATCTTGTCTAGCCATATTCTAGCTGGGCCTTGGGCACATCCAACCTCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CAA 90 bp | GTGCTAAGGACTGGGCAAACTGCAGTGGGGGCAGGGGCCTTGCTCAGGTTCAAATGGGCTTGCCCCTGCTaGTCCAAGCTCACTGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: VLRTGQTAVGAGALLRFKWACPC*SKLTEV Trigger: TACTTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCA...TTTGAACCTGAGCAAGGCCCCTGCCCCCACTGCAGTTTGCCCAGTCCTTAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | GGCAGGCTGAATGTAAACAACAGCAGGGTGAGGGGGTaGAACACGTGGAGGAGCTCATCTAGGCTCCCACTG | + |
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Preference number: 3 (lower is better) Translates to: GRLNVNNSRVRG*NTWRSSSRLPL Trigger: CAGTGGGAGCCTAGATGAGCTCCTCCACGTGTTCCACCCCCTCACCCTGCTGTTGTTTACATTCAGCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | CAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTaGTTGCCTCTCCCGTTACCCTCCCATTTCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: QYPGNAAWKCHS*LPLPLPSHFSP Trigger: TGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | ATTGGCATCATGGGGCAGTACCCAGGGAATGCAGCCTaGAAATGCCACTCTTGGTTGCCTCTCCCGTTACCC | + |
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Preference number: 3 (lower is better) Translates to: IGIMGQYPGNAA*KCHSWLPLPLP Trigger: GGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGATGCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CAA 90 bp | TATTGTGCTGACGAGTCAACGTGGGAAGGCAAGGGAAAGCGAACAGGTGCTCCTAAGAGCATCCTGGGCTaGCCCCTGCTTGTCCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: YCADESTWEGKGKRTGAPKSILG*PLLVQA Trigger: AGCTTGGACAAGCAGGGGCAAGCCCAGGATGCTCTT...AGGAGCACCTGTTCGCTTTCCCTTGCCTTCCCACGTTGACTCGTCAGCACAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 72 bp | CTACTCTCAGCCTCCTCAGGTCCTCACTGTGCGGTTTaGCCCTGCCAACCTGGGACTTTACGAAGCTTTACA | + |
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Preference number: 3 (lower is better) Translates to: LLSASSGPHCAV*PCQPGTLRSFT Trigger: TGTAAAGCTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGACCTGAGGAGGCTGAGAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | GTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATaGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCC | + |
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Preference number: 3 (lower is better) Translates to: VRSQHVESQLAS*GSTQGMQPGNA Trigger: GGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCCAGCACCAGACCACAGCAGGAACAGATTCCTCCCCAGAGGAAATTCTTAAAAGGCGCCCATCCTaGACCTACTCTGTGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LCQHQTTAGTDSSPEEILKRRPS*TYSVPE Trigger: CTCTGGCACAGAGTAGGTCAAGGATGGGCGCCTTTT...AAGAATTTCCTCTGGGGAGGAATCTGTTCCTGCTGTGGTCTGGTGCTGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR GCA 72 bp | ACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTaGCTCTCCCGTTACCCTCCCATTTCTCCCCAAATA | + |
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Preference number: 3 (lower is better) Translates to: TQGMQPGNATLG*LSRYPPISPQI Trigger: TATTTGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | AGGGACTTAGAGCAGCAGCTATTTCAGGGGGAGCTGTaGGGAAGGGAAAACCCTACAGTGGTTCCATGGAGA | + |
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Preference number: 3 (lower is better) Translates to: RDLEQQLFQGEL*GRENPTVVPWR Trigger: TCTCCATGGAACCACTGTAGGGTTTTCCCTTCCCCACAGCTCCCCCTGAAATAGCTGCTGCTCTAAGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATGGGGCAGTACCCAGCGCTTCTCTCCAACCTaGAAGTCAGTCCCCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: IVRSQHVESQLASWGSTQRFSPT*KSVPTP Trigger: AGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCG...CTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR TCA 72 bp | TCAGGTTCAAAAGGAAACAGGATGTGGCATCCGCCATaGCCAGCCATCATCAGTCATGACCAGCCATTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SGSKGNRMWHPP*PAIISHDQPLA Trigger: GGCCAATGGCTGGTCATGACTGATGATGGCTGGTCATGGCGGATGCCACATCCTGTTTCCTTTTGAACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| 3UTR CCA 72 bp | AGTTTAAAACAGACTAAAAAGGCAAGGCTAAAGTTGTaGGCCTATTGTGCTGACGAGTCAACGTGGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLKQTKKARLKL*AYCADESTWEG Trigger: GCCTTCCCACGTTGACTCGTCAGCACAATAGGCCCACAACTTTAGCCTTGCCTTTTTAGTCTGTTTTAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTCGCCCTCCAGCCCAGGAGCCTCATGGGTAAGGCAGTCAGTGGCTCTCCCCAAGGGGTGTGGCTaGGGTTGTAGGAGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSPSSPGASWVRQSVALPKGCG*GCRSRA Trigger: AGCCCTACTCCTACAACCCCAGCCACACCCCTTGGG...GAGAGCCACTGACTGCCTTACCCATGAGGCTCCTGGGCTGGAGGGCGAGCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GAGACGGATGCTGAATGCACAGGAGCCCAGGACGCCCCAGGCCTACTCTCAGCCGCTCATCGTAGCTGCTaGGGGTTGGCAGGAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETDAECTGAQDAPGLLSAAHRSC*GLAGMC Trigger: ACACATTCCTGCCAACCCCCAGCAGCTACGATGAGC...GGCTGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| 3UTR CAA 72 bp | GCGCTTCTCTCCAACCTTGAAGTCAGTCCCCACTCCTaGTGCTCGCCCTCCAGCCCAGGAGCCTCATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNLEVSPHS*CSPSSPGASWV Trigger: TACCCATGAGGCTCCTGGGCTGGAGGGCGAGCACAAGGAGTGGGGACTGACTTCAAGGTTGGAGAGAAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTGCCTCTCCCACTGGCCAGCGTTGGTaGAAAGCCGAAGGACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GAVPRECSLEMPLLVASPTGQRW*KAEGPW Trigger: CCATGGTCCTTCGGCTTTCCACCAACGCTGGCCAGT...GGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | GAGACGGATGCTGAATGCACAGGAGCCCAGGACGCCCCAGGCCTACTCTCAGCCCAGATAAAGCCTGAGTaGTCACAAGCCCCATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETDAECTGAQDAPGLLSAQIKPE*SQAPFH Trigger: ATGGAATGGGGCTTGTGATCACTCAGGCTTTATCTG...GGCTGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCAGGGTGAGGGGGTGGAACACGTGGAGGAGCTCATCTAGGCTCCCACTGCATGGGCGTCTGCTATaGACATGCTGCCCACCATAT | + |
|
Preference number: 4 (lower is better) Translates to: NSRVRGWNTWRSSSRLPLHGRLL*TCCPPY Trigger: ATATGGTGGGCAGCATGTTCATAGCAGACGCCCATG...CAGTGGGAGCCTAGATGAGCTCCTCCACGTGTTCCACCCCCTCACCCTGCTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | GGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTGCCTCTCCCCTTGCAGCTTCAGTGTaGGTGTGTCGTAGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAVPRECSLEMPLLVASPLAASV*VCRSWL Trigger: GAGCCAACTACGACACACTCACACTGAAGCTGCAAG...GGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTCGCCCTCCAGCCCAGGAGCCTCATGGGTAAGGCAGTCAGTGGCTCTCTTTCTCATGGGCGTCTaGTATGAACATGCTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCSPSSPGASWVRQSVALFLMGV*YEHAAH Trigger: GTGGGCAGCATGTTCATAGCAGACGCCCATGAGAAA...GAGAGCCACTGACTGCCTTACCCATGAGGCTCCTGGGCTGGAGGGCGAGCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | TCACTGAAGTACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCTGGTCCAGGCCATCTTaGAGCTTCAGTGTGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKYGLHHEPRGLRFSPTWSRPS*SFSVSV Trigger: CACACTCACACTGAAGCTGCAAGATGGCCTGGACCA...GGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTAAGGACTGGGCAAACTGCAGTGGGGGCAGGGGCCTTGCTCAGGTTCAAAGTAGCTGCTGGGGGTTaGCAGGAATGTGTCACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLRTGQTAVGAGALLRFKVAAGG*QECVTV Trigger: TACGGTGACACATTCCTGCCAACCCCCAGCAGCTAC...TTTGAACCTGAGCAAGGCCCCTGCCCCCACTGCAGTTTGCCCAGTCCTTAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| 3UTR CAA 72 bp | GCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTaGGTTGCCTCTCCCGTTACCCTCCCATTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVPRECSLEMPL*VASPVTLPFLP Trigger: GGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | GAGACGGATGCTGAATGCACAGGAGCCCAGGACGCCCCAGGCCTACTCTCAGCCTTCATTGGTTTGTACTaGGAGTTTCTCATGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETDAECTGAQDAPGLLSAFIGLY*EFLMGV Trigger: GACGCCCATGAGAAACTCTCAGTACAAACCAATGAA...GGCTGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | ATCCGCCATGACCAGCCATCATCAGTCATGACCAGCCATTGGCCTCCAGAGTGCTGTCACCTTGCTTGCTaGTTCCTTCCACTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRHDQPSSVMTSHWPPECCHLAC*FLPLAS Trigger: GCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACA...GCACTCTGGAGGCCAATGGCTGGTCATGACTGATGATGGCTGGTCATGGCGGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | TCACTGAAGTACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCTTCCTCCCAAAACCGTaGACTACACTTACTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLKYGLHHEPRGLRFSPTFLPKP*TTLTGV Trigger: GACCCCAGTAAGTGTAGTCCACGGTTTTGGGAGGAA...GGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTGGCGTTGACAACTCGGATTaGATGCTCCTCCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVPTGSRERSHLCSVRAGVDNSD*MLLPQS Trigger: GCTCTGGGGGAGGAGCATCCAATCCGAGTTGTCAAC...GCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGCACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | TCATGGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTGCCTCTTCAGGAGGGCTTCCTaGCTGAGTGTGTGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWGSTQGMQPGNATLGCLFRRAS*LSVWKA Trigger: AGCCTTCCACACACTCAGCCAGGAAGCCCTCCTGAA...GAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| 3UTR CAA 72 bp | CCTACTCTCAGCCTCCTCAGGTCCTCACTGTGCGGTTaGCCCCTGCCAACCTGGGACTTTACGAAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PTLSLLRSSLCG*PLPTWDFTKLY Trigger: GTAAAGCTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGACCTGAGGAGGCTGAGAGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | ATCCGCCATGACCAGCCATCATCAGTCATGACCAGCCATTGGCCTCCAGAGTGCAGGTCTGCAAGGCGTTaGCAACTCGGATTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRHDQPSSVMTSHWPPECRSARR*QLGLDA Trigger: AGCATCCAATCCGAGTTGTCAACGCCTTGCAGACCT...GCACTCTGGAGGCCAATGGCTGGTCATGACTGATGATGGCTGGTCATGGCGGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | GAGACGGATGCTGAATGCACAGGAGCCCAGGACGCCCCAGGCCTACTCTCAGCCTACATCTGCATCCAGTaGGAGTTCCACAGAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ETDAECTGAQDAPGLLSAYICIQ*EFHRTY Trigger: ATAAGTTCTGTGGAACTCTCACTGGATGCAGATGTA...GGCTGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGGAAAGGGGACCAGCAAAGTAGGCACCTTGAGGGCTCCAGAAAGCCTGGACTCCTCGAATAAGTaGACACAAGGTCTGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAGKGTSKVGTLRAPESLDSSNK*TQGLQG Trigger: GCCTTGCAGACCTTGTGTGCACTTATTCGAGGAGTC...CAGGCTTTCTGGAGCCCTCAAGGTGCCTACTTTGCTGGTCCCCTTTCCAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTCACTGTGCGGTTTGCCCCTGCCAACCTGGGACTTTACGAAGCTTTACATGCTGCTTCCTTCCACTaGCCAGCGTTGGTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRFAPANLGLYEALHAASFH*PALVES Trigger: GCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGC...ATGTAAAGCTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | TCATGGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTGCCTCCAGAGCTTGCCACTGTaGAGCCTGTGTTCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWGSTQGMQPGNATLGCLQSLPL*SLCSSF Trigger: GAAAGATGAACACAGGCTTCACAGTGGCAAGCTCTG...GAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | AGCACCAGACCACAGCAGGAACAGATTCCTCCCCAGAGGAAATTCTTAGGCAGGGTGTGTCACCTTGCTTaGTGCTTCCTTCCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STRPQQEQIPPQRKFLGRVCHLA*CFLPLA Trigger: GGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACAC...CCTGCCTAAGAATTTCCTCTGGGGAGGAATCTGTTCCTGCTGTGGTCTGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| 3UTR CAA 72 bp | TACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTaGCCTCTCCCGTTACCCTCCCATTTCTCCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YPGNAAWKCHSW*PLPLPSHFSPN Trigger: ATTTGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCAGCACCAGACCACAGCAGGAACAGATTCCTCCCCAGAGGAAATTCTTAAAGCTCATCGTAGCTaGTGGGGGTTGGCAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LCQHQTTAGTDSSPEEILKAHRS*WGLAGM Trigger: CATTCCTGCCAACCCCCAGCAGCTACGATGAGCTTT...AAGAATTTCCTCTGGGGAGGAATCTGTTCCTGCTGTGGTCTGGTGCTGGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GAGACGGATGCTGAATGCACAGGAGCCCAGGACGCCCCAGGCCTACTCTCAGCCTTATCAGTAGATTACTaGTCTGTACATCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETDAECTGAQDAPGLLSALSVDY*SVHLHP Trigger: TGGATGCAGATGTACAGACCAGTAATCTACTGATAA...GGCTGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GAGACGGATGCTGAATGCACAGGAGCCCAGGACGCCCCAGGCCTACTCTCAGCCCATGTAAAAATGCATTaGCATACTGATCCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETDAECTGAQDAPGLLSAHVKMH*HTDPLQ Trigger: TTGCAGAGGATCAGTATGCCAATGCATTTTTACATG...GGCTGAGAGTAGGCCTGGGGCGTCCTGGGCTCCTGTGCATTCAGCATCCGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | TCATGGGGCAGTACCCAGGGAATGCAGCCTGGAAATGCCACTCTTGGTTGCCTCAAAGCCGAAGGACCATaGAGTAGAGGTTGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWGSTQGMQPGNATLGCLKAEGP*SRGCQS Trigger: GCTTTGACAACCTCTACTCCATGGTCCTTCGGCTTT...GAGGCAACCAAGAGTGGCATTTCCAGGCTGCATTCCCTGGGTACTGCCCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGACAAGATGGAGGCTGGGGGCGTGGTGCTCACCTAGCCTGTCTCTATGAACCATCAAGTTCTTCATaGACAGCTCTGCCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARQDGGWGRGAHLACLYEPSSSS*TALPCQ Trigger: TTGACAAGGCAGAGCTGTGCATGAAGAACTTGATGG...TTCATAGAGACAGGCTAGGTGAGCACCACGCCCCCAGCCTCCATCTTGTCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCATCCTGGGCTTGCCCCTGCTTGTCCAAGCTCACTGAAGTACGGCCTTCAACTGAGAGTTTCTCATaGGCGTCTGCTATGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: RASWACPCLSKLTEVRPSTESFS*ASAMNM Trigger: CATGTTCATAGCAGACGCCCATGAGAAACTCTCAGT...TGAAGGCCGTACTTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCAGGATGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGGAAAGGGGACCAGCAAAGTAGGCACCTTGAGGGCTCCAGAAAGCCTGAGAGTGCCAGAAGAATaGCTTCATTGGTTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGKGTSKVGTLRAPESLRVPEE*LHWFVL Trigger: CAGTACAAACCAATGAAGCCATTCTTCTGGCACTCT...CAGGCTTTCTGGAGCCCTCAAGGTGCCTACTTTGCTGGTCCCCTTTCCAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | ATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATGGGGCAGTACCCAGCTTCATGCACAGCTCTaGCTTGTCAAAGCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVRSQHVESQLASWGSTQLHAQL*LVKAHQ Trigger: CTGATGGGCTTTGACAAGGCAGAGCTGTGCATGAAG...CTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTCGCCCTCCAGCCCAGGAGCCTCATGGGTAAGGCAGTCAGTGGCTCTCTCCTTGTCTTTATACTaGCTGTTGTACTCAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCSPSSPGASWVRQSVALSLSLY*LLYSDK Trigger: TTTATCTGAGTACAACAGGCAGTATAAAGACAAGGA...GAGAGCCACTGACTGCCTTACCCATGAGGCTCCTGGGCTGGAGGGCGAGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGGAAAGGGGACCAGCAAAGTAGGCACCTTGAGGGCTCCAGAAAGCCTGTCATCTTTCGTGTCCTaGATGACAATTGAGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: AAGKGTSKVGTLRAPESLSSFVS*MTIELY Trigger: GTATAGCTCAATTGTCATGCAGGACACGAAAGATGA...CAGGCTTTCTGGAGCCCTCAAGGTGCCTACTTTGCTGGTCCCCTTTCCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTCACTGTGCGGTTTGCCCCTGCCAACCTGGGACTTTACGAAGCTTTACATTCTGATATTCACCAGTaGGTGTGTCACCTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRFAPANLGLYEALHSDIHQ*VCHLAC Trigger: GCAAGCAAGGTGACACACGCACTGGTGAATATCAGA...ATGTAAAGCTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGACAAGATGGAGGCTGGGGGCGTGGTGCTCACCTAGCCTGTCTCTATGAACTACGACTTGGGGGATaGGACAGTATCTGTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ARQDGGWGRGAHLACLYELRLGG*DSICKI Trigger: AATTTTACAGATACTGTCCCATCCCCCAAGTCGTAG...TTCATAGAGACAGGCTAGGTGAGCACCACGCCCCCAGCCTCCATCTTGTCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | GACCCACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACTCCTGGCTGAGTGTGTaGAAGGCTAGGTTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DPPYNGLRFYIYACQCANSWLSV*KARFLR Trigger: CCGGAGGAACCTAGCCTTCCACACACTCAGCCAGGA...GTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | TATTGTGCTGACGAGTCAACGTGGGAAGGCAAGGGAAAGCGAACAGGTGCTCCTCCAAATTCACCTTCATaGGGAAGAGTTCCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YCADESTWEGKGKRTGAPPNSPS*GRVPPK Trigger: TTTGGGAGGAACTCTTCCTCATGAAGGTGAATTTGG...AGGAGCACCTGTTCGCTTTCCCTTGCCTTCCCACGTTGACTCGTCAGCACAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | ACATCGGAGGGACTTAGAGCAGCAGCTATTTCAGGGGGAGCTGTGGGGAAGGGACTTTCGTGTCCTGCATaGCAATTGAGCTATACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TSEGLRAAAISGGAVGKGLSCPA*QLSYTL Trigger: TAAAGTATAGCTCAATTGTCATGCAGGACACGAAAG...TCCCTTCCCCACAGCTCCCCCTGAAATAGCTGCTGCTCTAAGTCCCTCCGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | ACATCGGAGGGACTTAGAGCAGCAGCTATTTCAGGGGGAGCTGTGGGGAAGGGAGTAGATTTATTCTTCTaGTGGACTCCTCGAATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSEGLRAAAISGGAVGKGVDLFF*WTPRIS Trigger: ACTTATTCGAGGAGTCCACCAGAAGAATAAATCTAC...TCCCTTCCCCACAGCTCCCCCTGAAATAGCTGCTGCTCTAAGTCCCTCCGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTTGGTTGCCTCTCCCGTTACCCTCCCATTTCTCCCCAAATAAGAGCATCCATTTCTGGATGGCTCTaGGCTAAAACTGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGCLSRYPPISPQIRASISGWL*AKTVMK Trigger: CTTCATCACAGTTTTAGCTCAGAGCCATCCAGAAAT...GGATGCTCTTATTTGGGGAGAAATGGGAGGGTAACGGGAGAGGCAACCAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | GACCCACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACCCCCCAGAGCCTGGATaGAGTGTTGAAATAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DPPYNGLRFYIYACQCANPPEPG*SVEISS Trigger: ACTGCTTATTTCAACACTGCATCCAGGCTCTGGGGG...GTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGTGGGTC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | GACCCACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACACAGCATCATACCCATaGTCTCTACGACTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPPYNGLRFYIYACQCANTASYP*SLRLGG Trigger: TCCCCCAAGTCGTAGAGAGCATGGGTATGATGCTGT...GTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGTGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR GCA 90 bp | ATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATGGGGCAGTACCCAGGGCATACTGATCCTCTaGAATGCATGTGAGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: IVRSQHVESQLASWGSTQGILIL*NACEDN Trigger: ATTATCCTCACATGCATTGCAGAGGATCAGTATGCC...CTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | TATTGTGCTGACGAGTCAACGTGGGAAGGCAAGGGAAAGCGAACAGGTGCTCCTGATTTATTCTTCTGGTaGACTCCTCGAATAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YCADESTWEGKGKRTGAPDLFFW*TPRISA Trigger: TGCACTTATTCGAGGAGTCCACCAGAAGAATAAATC...AGGAGCACCTGTTCGCTTTCCCTTGCCTTCCCACGTTGACTCGTCAGCACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATGGGGCAGTACCCAGAGGTTGTCAAAGCTCTaGTGCATGCGGATAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVRSQHVESQLASWGSTQRLSKL*CMRIIS Trigger: TGAAATTATCCGCATGCACCAGAGCTTTGACAACCT...CTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR TCA 90 bp | GCTCTGGGGTTTATCACCATGGGAAACACTAAAGCCTCAGGTCAAGTTATCCATTACTCAGATAAAGCCTaGGTGATCACAAGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALGFITMGNTKASGQVIHYSDKA*VITSPI Trigger: AATGGGGCTTGTGATCACTCAGGCTTTATCTGAGTA...ATGGATAACTTGACCTGAGGCTTTAGTGTTTCCCATGGTGATAAACCCCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGGGGTTTATCACCATGGGAAACACTAAAGCCTCAGGTCAAGTTATCCATTCCAGGATAGTGTTCTaGCTGATATTATCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALGFITMGNTKASGQVIHSRIVF*LILSVT Trigger: TGTCACAGATAATATCAGCCAGAACACTATCCTGGA...ATGGATAACTTGACCTGAGGCTTTAGTGTTTCCCATGGTGATAAACCCCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR GCA 90 bp | ACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACAGGTTGACAGCTTCATAGAGTaGCAGAAGAATGGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TLQWLKILHLCMSVCQQVDSFIE*QKNGFI Trigger: AATGAAGCCATTCTTCTGGCACTCTATGAAGCTGTC...AACCTGTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AGTGTGCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTGGCTTCCACTGGCCAGCGTaGGTGGAAAGCCGAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SVPTGSRERSHLCSVRAGFHWPA*VESRRT Trigger: GGTCCTTCGGCTTTCCACCAACGCTGGCCAGTGGAA...GCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGCACACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGTACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCCATGCTCTCTACGACTaGGGGGATGGGACAGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKYGLHHEPRGLRFSPTHALYD*GDGTVS Trigger: AGATACTGTCCCATCCCCCAAGTCGTAGAGAGCATG...GGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGTACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCATGCACAGCTCTGCCTaGTCAAAGCCCATCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SLKYGLHHEPRGLRFSPTMHSSA*SKPISI Trigger: TATGCTGATGGGCTTTGACAAGGCAGAGCTGTGCAT...GGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AGTGTGCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTGGCGACCGAACCAGCTCTTaGAAGAAGGCAGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPTGSRERSHLCSVRAGDRTSS*KKAASL Trigger: CAAGGAGGCTGCCTTCTTCAAAGAGCTGGTTCGGTC...GCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGCACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGTACGGCCTTCACCACGAGCCTCGGGGTCTGCGCTTCTCTCCAACCCTGTTCCTCCGACAGTaGAGATATGTGATTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLKYGLHHEPRGLRFSPTLFLRQ*RYVIHS Trigger: GCTGTGAATCACATATCTCAACTGTCGGAGGAACAG...GGTTGGAGAGAAGCGCAGACCCCGAGGCTCGTGGTGAAGGCCGTACTTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AGTGTGCCAACAGGTTCTCGAGAACGATCACACCTCTGCTCAGTCAGGGCTGGCTTGGTCCAGGCCATCTaGCAGCTTCAGTGTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVPTGSRERSHLCSVRAGLVQAI*QLQCEC Trigger: ACACTCACACTGAAGCTGCAAGATGGCCTGGACCAA...GCCAGCCCTGACTGAGCAGAGGTGTGATCGTTCTCGAGAACCTGTTGGCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS GCA 90 bp | GATGATGGCTCTGATATTCACCAGTGCGTGTGTCACCTTGCTTGCTaGTTCCTTCCACTGGCCAGCGTTGGTGGAAAGCCGAAGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: DDGSDIHQCVCHLAC*FLPLASVGGKPKDH Trigger: ATGGTCCTTCGGCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACTGGTGAATATCAGAGCCATCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AAGCGAACAGGTGCTCCTGGTGCCAAAACTAAAATCCAGAAAGGAGCGGTCGGACGTGTGTCACCTTGCTaGCTGCTTCCTTCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRTGAPGAKTKIQKGAVGRVSPC*LLPSTG Trigger: GCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACG...TCCGACCGCTCCTTTCTGGATTTTAGTTTTGGCACCAGGAGCACCTGTTCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS GCA 90 bp | ATTGATGATGGCTCTGATATTCACCAGTGCGTGTGTCACCTTGCTTaGTGCTTCCTTCCACTGGCCAGCGTTGGTGGAAAGCCGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IDDGSDIHQCVCHLA*CFLPLASVGGKPKD Trigger: GTCCTTCGGCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACTGGTGAATATCAGAGCCATCATCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | ATAGTCAGAAGCCAGCACGTGGAATCTCAATTGGCATCATGGGGCAGTACCCAGAGTGCGTGTGTCACCTaGCTTGCTGCTTCCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IVRSQHVESQLASWGSTQSACVT*LAASFH Trigger: GTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACT...CTGGGTACTGCCCCATGATGCCAATTGAGATTCCACGTGCTGGCTTCTGACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AGCACCAGACCACAGCAGGAACAGATTCCTCCCCAGAGGAAATTCTTAGGCAGGAGAGTAGCGCTCATATaGGTCCAGGCCATCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STRPQQEQIPPQRKFLGRRVALI*VQAILQ Trigger: CTGCAAGATGGCCTGGACCAATATGAGCGCTACTCT...CCTGCCTAAGAATTTCCTCTGGGGAGGAATCTGTTCCTGCTGTGGTCTGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AAGCGAACAGGTGCTCCTGGTGCCAAAACTAAAATCCAGAAAGGAGCGGTCGGAGGCAGCCTCCTTGTGTaGCTCAGAGTAGCGCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KRTGAPGAKTKIQKGAVGGSLLV*LRVALI Trigger: TATGAGCGCTACTCTGAGCAACACAAGGAGGCTGCC...TCCGACCGCTCCTTTCTGGATTTTAGTTTTGGCACCAGGAGCACCTGTTCGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | GCTAGACAAGATGGAGGCTGGGGGCGTGGTGCTCACCTAGCCTGTCTCTATGAACCTTTAGAGGCTTTTTaGAGGCTGAAGATTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARQDGGWGRGAHLACLYEPLEAF*RLKISG Trigger: TCCGGAAATCTTCAGCCTCAAAAAAGCCTCTAAAGG...TTCATAGAGACAGGCTAGGTGAGCACCACGCCCCCAGCCTCCATCTTGTCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS TCA 90 bp | CAGAGTAGCGCTCATATTGGTCCAGGCCATCTTGCAGCTTCAGTGTaGGTGTGTCGTAGTTGGCTCGCACTACTTCTAGTACCTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSSAHIGPGHLAASV*VCRSWLALLLVPVP Trigger: AGGAACAGGTACTAGAAGTAGTGCGAGCCAACTACGACACACTCACACTGAAGCTGCAAGATGGCCTGGACCAATATGAGCGCTACTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | AACAGCAGGGTGAGGGGGTGGAACACGTGGAGGAGCTCATCTAGGCTCCCACTGAATAAGCAGTTAATGTaGTCCTTGATCTTCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSRVRGWNTWRSSSRLPLNKQLM*SLIFIS Trigger: GCTGATGAAGATCAAGGACAACATTAACTGCTTATT...CAGTGGGAGCCTAGATGAGCTCCTCCACGTGTTCCACCCCCTCACCCTGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | GCTCTGGGGTTTATCACCATGGGAAACACTAAAGCCTCAGGTCAAGTTATCCATCGGCAGGGAAGGTTCTaGTCAGCAGCCTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGFITMGNTKASGQVIHRQGRF*SAAFFL Trigger: CAGGAAGAAGGCTGCTGACAAGAACCTTCCCTGCCG...ATGGATAACTTGACCTGAGGCTTTAGTGTTTCCCATGGTGATAAACCCCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCATCCTGGGCTTGCCCCTGCTTGTCCAAGCTCACTGAAGTACGGCCTTCAGCTTCGAATATACTGTaGATCATTACATATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RASWACPCLSKLTEVRPSASNIL*IITYSR Trigger: CCTGGAATATGTAATGATCAACAGTATATTCGAAGC...TGAAGGCCGTACTTCAGTGAGCTTGGACAAGCAGGGGCAAGCCCAGGATGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | GTCCTCACTGTGCGGTTTGCCCCTGCCAACCTGGGACTTTACGAAGCTTTACATGTAAAAATGTTGTGCTaGGCCAAAAGTACAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLTVRFAPANLGLYEALHVKMLC*AKSTVS Trigger: TGAAACTGTACTTTTGGCCAAGCACAACATTTTTAC...ATGTAAAGCTTCGTAAAGTCCCAGGTTGGCAGGGGCAAACCGCACAGTGAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS-3UTR CAA 90 bp | ACCCTACAATGGCTTAAGATTCTACATCTATGCATGTCAGTGTGCCAACAGGTTCAGTTAATGTTGTCCTaGATCTTCATCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLQWLKILHLCMSVCQQVQLMLS*IFISSS Trigger: GGAGGAGCTGATGAAGATCAAGGACAACATTAACTG...AACCTGTTGGCACACTGACATGCATAGATGTAGAATCTTAAGCCATTGTAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 90 bp | GCTTCGAATATACTGTTGATCATTACATATTCCAGGATAGTGTTCTaGCTGATATTATCTGTGACAGTCACCAAGCAAAGAAGAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASNILLIITYSRIVF*LILSVTVTKQRRSF Trigger: GAAACTTCTTCTTTGCTTGGTGACTGTCACAGATAATATCAGCCAGAACACTATCCTGGAATATGTAATGATCAACAGTATATTCGAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | CAGGAGATGGTGGAGAACTCCTTCAGGAGGGCTTCCTaGCTGAGTGTGTGGAAGGCTAGGTTCCTCCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: QEMVENSFRRAS*LSVWKARFLRT Trigger: CGTCCGGAGGAACCTAGCCTTCCACACACTCAGCCAGGAAGCCCTCCTGAAGGAGTTCTCCACCATCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | AGTGCGTGTGTCACCTTGCTTGCTGCTTCCTTCCACTaGCCAGCGTTGGTGGAAAGCCGAAGGACCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SACVTLLAASFH*PALVESRRTME Trigger: CTCCATGGTCCTTCGGCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | TGCACACAAGGTCTGCAAGGCGTTGACAACTCGGATTaGATGCTCCTCCCCCAGAGCCTGGATGCAGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CTQGLQGVDNSD*MLLPQSLDAVL Trigger: CAACACTGCATCCAGGCTCTGGGGGAGGAGCATCCAATCCGAGTTGTCAACGCCTTGCAGACCTTGTGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS GCA 72 bp | TCTGATATTCACCAGTGCGTGTGTCACCTTGCTTGCTaGTTCCTTCCACTGGCCAGCGTTGGTGGAAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SDIHQCVCHLAC*FLPLASVGGKP Trigger: CGGCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACTGGTGAATATCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS GCA 72 bp | GGCTCTGATATTCACCAGTGCGTGTGTCACCTTGCTTaGTGCTTCCTTCCACTGGCCAGCGTTGGTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSDIHQCVCHLA*CFLPLASVGGK Trigger: CTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACTGGTGAATATCAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | CCTTGCTTGCTGCTTCCTTCCACTGGCCAGCGTTGGTaGAAAGCCGAAGGACCATGGAGTAGAGGTTGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PCLLLPSTGQRW*KAEGPWSRGCQ Trigger: TTGACAACCTCTACTCCATGGTCCTTCGGCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | TCACCTTGCTTGCTGCTTCCTTCCACTGGCCAGCGTTaGTGGAAAGCCGAAGGACCATGGAGTAGAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPCLLLPSTGQR*WKAEGPWSRGC Trigger: ACAACCTCTACTCCATGGTCCTTCGGCTTTCCACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 90 bp | ATTAGGTCCAGGACTGCACACACCAGGGGCCGGCAGGGAAGGTTCTaGTCAGCAGCCTTCTTCCTGTGTCTCATGGGCATTCTATGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: IRSRTAHTRGRQGRF*SAAFFLCLMGILCK Trigger: CTTACATAGAATGCCCATGAGACACAGGAAGAAGGCTGCTGACAAGAACCTTCCCTGCCGGCCCCTGGTGTGTGCAGTCCTGGACCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | ATGATGGCTCTGATATTCACCAGTGCGTGTGTCACCTaGCTTGCTGCTTCCTTCCACTGGCCAGCGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MMALIFTSACVT*LAASFHWPALV Trigger: CACCAACGCTGGCCAGTGGAAGGAAGCAGCAAGCAAGGTGACACACGCACTGGTGAATATCAGAGCCATCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | GGCAGCCTCCTTGTGTTGCTCAGAGTAGCGCTCATATaGGTCCAGGCCATCTTGCAGCTTCAGTGTGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLLVLLRVALI*VQAILQLQCEC Trigger: ACACTCACACTGAAGCTGCAAGATGGCCTGGACCAATATGAGCGCTACTCTGAGCAACACAAGGAGGCTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | CCGAACCAGCTCTTTGAAGAAGGCAGCCTCCTTGTGTaGCTCAGAGTAGCGCTCATATTGGTCCAGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: PNQLFEEGSLLV*LRVALILVQAI Trigger: GATGGCCTGGACCAATATGAGCGCTACTCTGAGCAACACAAGGAGGCTGCCTTCTTCAAAGAGCTGGTTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | TTGCTCAGAGTAGCGCTCATATTGGTCCAGGCCATCTaGCAGCTTCAGTGTGAGTGTGTCGTAGTTGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLRVALILVQAI*QLQCECVVVGS Trigger: CGAGCCAACTACGACACACTCACACTGAAGCTGCAAGATGGCCTGGACCAATATGAGCGCTACTCTGAGCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | TGGCTGAGTGTGTGGAAGGCTAGGTTCCTCCGGACGTaGGTACTAATGGACCGAACCAGCTCTTTGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WLSVWKARFLRT*VLMDRTSSLKK Trigger: CTTCTTCAAAGAGCTGGTTCGGTCCATTAGTACCAACGTCCGGAGGAACCTAGCCTTCCACACACTCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 90 bp | CTCCTTGTGTTGCTCAGAGTAGCGCTCATATTGGTCCAGGCCATCTaGCAGCTTCAGTGTGAGTGTGTCGTAGTTGGCTCGCACTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLVLLRVALILVQAI*QLQCECVVVGSHYF Trigger: GAAGTAGTGCGAGCCAACTACGACACACTCACACTGAAGCTGCAAGATGGCCTGGACCAATATGAGCGCTACTCTGAGCAACACAAGGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 90 bp | ACTAATGGACCGAACCAGCTCTTTGAAGAAGGCAGCCTCCTTGTGTaGCTCAGAGTAGCGCTCATATTGGTCCAGGCCATCTTGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TNGPNQLFEEGSLLV*LRVALILVQAILQL Trigger: AAGCTGCAAGATGGCCTGGACCAATATGAGCGCTACTCTGAGCAACACAAGGAGGCTGCCTTCTTCAAAGAGCTGGTTCGGTCCATTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS GCA 72 bp | ACCAGTAAAGCCAAGAGGACGACAGCATCATACCCATaGTCTCTACGACTTGGGGGATGGGACAGTATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSKAKRTTASYP*SLRLGGWDSIC Trigger: ACAGATACTGTCCCATCCCCCAAGTCGTAGAGAGCATGGGTATGATGCTGTCGTCCTCTTGGCTTTACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 90 bp | TTTGAAGAAGGCAGCCTCCTTGTGTTGCTCAGAGTAGCGCTCATATaGGTCCAGGCCATCTTGCAGCTTCAGTGTGAGTGTGTCGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FEEGSLLVLLRVALI*VQAILQLQCECVVV Trigger: AACTACGACACACTCACACTGAAGCTGCAAGATGGCCTGGACCAATATGAGCGCTACTCTGAGCAACACAAGGAGGCTGCCTTCTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS TCA 72 bp | GCTCATATTGGTCCAGGCCATCTTGCAGCTTCAGTGTaGGTGTGTCGTAGTTGGCTCGCACTACTTCTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AHIGPGHLAASV*VCRSWLALLLV Trigger: TACTAGAAGTAGTGCGAGCCAACTACGACACACTCACACTGAAGCTGCAAGATGGCCTGGACCAATATGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | ATCTTCATCAGCTCCTCCCCATCCAGGGACTCTAGCTaGCCTTCCAGATACTCCAAATTCACCTTCATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IFISSSPSRDSS*PSRYSKFTFMR Trigger: CCTCATGAAGGTGAATTTGGAGTATCTGGAAGGCAAGCTAGAGTCCCTGGATGGGGAGGAGCTGATGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | AGAGGACGACAGCATCATACCCATGCTCTCTACGACTaGGGGGATGGGACAGTATCTGTAAAATTGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGRQHHTHALYD*GDGTVSVKLLR Trigger: TCGAAGCAATTTTACAGATACTGTCCCATCCCCCAAGTCGTAGAGAGCATGGGTATGATGCTGTCGTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS GCA 72 bp | CGTAGATTTATTCTTCTGGTGGACTCCTCGAATAAGTaGACACAAGGTCTGCAAGGCGTTGACAACTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRFILLVDSSNK*TQGLQGVDNSD Trigger: ATCCGAGTTGTCAACGCCTTGCAGACCTTGTGTGCACTTATTCGAGGAGTCCACCAGAAGAATAAATCTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS TCA 72 bp | TTGTCTTTATACTGCCTGTTGTACTCAGATAAAGCCTaGGTGATCACAAGCCCCATTCCATTCAGTGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSLYCLLYSDKA*VITSPIPFSVA Trigger: GGCTACACTGAATGGAATGGGGCTTGTGATCACTCAGGCTTTATCTGAGTACAACAGGCAGTATAAAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS CCA 72 bp | AGAATGGCTTCATTGGTTTGTACTGAGAGTTTCTCATaGGCGTCTGCTATGAACATGCTGCCCACCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: RMASLVCTESFS*ASAMNMLPTIF Trigger: AAATATGGTGGGCAGCATGTTCATAGCAGACGCCCATGAGAAACTCTCAGTACAAACCAATGAAGCCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
||
| CDS TCA 72 bp | TGGTTTGTACTGAGAGTTTCTCATGGGCGTCTGCTATaGACATGCTGCCCACCATATTTGTTAAAGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: WFVLRVSHGRLL*TCCPPYLLKQK Trigger: TTTCTGCTTTAACAAATATGGTGGGCAGCATGTTCATAGCAGACGCCCATGAGAAACTCTCAGTACAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS GCA 72 bp | ATCCAAACTCTCCATCAAGTTCTTCATGCACAGCTCTaGCTTGTCAAAGCCCATCAGCATATTAATGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: IQTLHQVLHAQL*LVKAHQHINDV Trigger: GACATCATTAATATGCTGATGGGCTTTGACAAGGCAGAGCTGTGCATGAAGAACTTGATGGAGAGTTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | ATGATGTCAAATCCAGACGTAGATTTATTCTTCTGGTaGACTCCTCGAATAAGTGCACACAAGGTCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: MMSNPDVDLFFW*TPRISAHKVCK Trigger: CTTGCAGACCTTGTGTGCACTTATTCGAGGAGTCCACCAGAAGAATAAATCTACGTCTGGATTTGACATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | AATTTCATAGTAAAGCTCATCGTAGCTGCTGGGGGTTaGCAGGAATGTGTCACCGTATGTGATAAACATGTT | + |
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Preference number: 6 (lower is better) Translates to: NFIVKLIVAAGG*QECVTVCDKHV Trigger: AACATGTTTATCACATACGGTGACACATTCCTGCCAACCCCCAGCAGCTACGATGAGCTTTACTATGAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | GATTTAAATGGACAGCTTCATAGAGTGCCAGAAGAATaGCTTCATTGGTTTGTACTGAGAGTTTCTCATGGG | + |
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Preference number: 6 (lower is better) Translates to: DLNGQLHRVPEE*LHWFVLRVSHG Trigger: CCCATGAGAAACTCTCAGTACAAACCAATGAAGCCATTCTTCTGGCACTCTATGAAGCTGTCCATTTAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS TCA 72 bp | CACTGTGAAGCCTGTGTTCATCTTTCGTGTCCTGCATaGCAATTGAGCTATACTTTAAGAAGGTTATCAGTA | + |
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Preference number: 6 (lower is better) Translates to: HCEACVHLSCPA*QLSYTLRRLSV Trigger: TACTGATAACCTTCTTAAAGTATAGCTCAATTGTCATGCAGGACACGAAAGATGAACACAGGCTTCACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CCA 72 bp | TTGAGCTATACTTTAAGAAGGTTATCAGTAGATTACTaGTCTGTACATCTGCATCCAGTGAGAGTTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LSYTLRRLSVDY*SVHLHPVRVPQ Trigger: CTGTGGAACTCTCACTGGATGCAGATGTACAGACCAGTAATCTACTGATAACCTTCTTAAAGTATAGCTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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| CDS CAA 72 bp | TTCACAATCATAAGGGCCAATGTAAAAATGTTGTGCTaGGCCAAAAGTACAGTTTCATTTGACATAAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FTIIRANVKMLC*AKSTVSFDIRN Trigger: GTTCCTTATGTCAAATGAAACTGTACTTTTGGCCAAGCACAACATTTTTACATTGGCCCTTATGATTGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045396.9 |
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