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Pregenerated sensors for ARMH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000085861

Ensembl transcript IDs: ENSMUST00000136906.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTGTCATGTACTCGCTGGCGAACTGCGCGGCACTCATGCCTCCTGTaGAAGACAGTAGTCCGATTTTCTGGGCAGCCTGAGCTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: LSCTRWRTARHSCLL*KTVVRFSGQPELSY
Trigger: ATAAGAGAGCTCAGGCTGCCCAGAAAATCGGACTACTGTCTTTCACAGGAGGCATGAGTGCCGCGCAGTTCGCCAGCGAGTACATGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS TCA 90 bp GGTAGCACCAGCACGCTACACTCTGGAGTAGCAGGATCTTTGTCCTaGATGACATCGCCTTTTTCTTCTGCAGCAAGAAAGCAACCTCTG +
Preference number: 5 (lower is better)
Translates to: GSTSTLHSGVAGSLS*MTSPFSSAARKQPL
Trigger: CAGAGGTTGCTTTCTTGCTGCAGAAGAAAAAGGCGATGTCATTCAGGACAAAGATCCTGCTACTCCAGAGTGTAGCGTGCTGGTGCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS TCA 90 bp CTCATGCCTCCTGTGAAAGACAGTAGTCCGATTTTCTGGGCAGCCTaGGCTCTCTTATCAAGGGATAGTCTTTTATTCTTCAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: LMPPVKDSSPIFWAA*ALLSRDSLLFFRML
Trigger: CAGCATCCTGAAGAATAAAAGACTATCCCTTGATAAGAGAGCTCAGGCTGCCCAGAAAATCGGACTACTGTCTTTCACAGGAGGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS CCA 90 bp AATTGGCAGAGGCGGTGGGTGTTTATTTCAGTCTTGTTGCTAGATTaGAAAGACTCCTCCAAGAAATCAATTAAAGTCGGAATAATCTCG +
Preference number: 5 (lower is better)
Translates to: NWQRRWVFISVLLLD*KDSSKKSIKVGIIS
Trigger: CGAGATTATTCCGACTTTAATTGATTTCTTGGAGGAGTCTTTCCAATCTAGCAACAAGACTGAAATAAACACCCACCGCCTCTGCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS TCA 72 bp ACTCGCTGGCGAACTGCGCGGCACTCATGCCTCCTGTaGAAGACAGTAGTCCGATTTTCTGGGCAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: TRWRTARHSCLL*KTVVRFSGQPE
Trigger: CTCAGGCTGCCCAGAAAATCGGACTACTGTCTTTCACAGGAGGCATGAGTGCCGCGCAGTTCGCCAGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS CAA 72 bp GAAACTTCTGAGGCTCTCCGACAGGGTTCTGAAGAGTaGACATGTCTGACTGCAAATACTGCAAATCCGTCC +
Preference number: 6 (lower is better)
Translates to: ETSEALRQGSEE*TCLTANTANPS
Trigger: GGACGGATTTGCAGTATTTGCAGTCAGACATGTCAACTCTTCAGAACCCTGTCGGAGAGCCTCAGAAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS TCA 72 bp AGCACGCTACACTCTGGAGTAGCAGGATCTTTGTCCTaGATGACATCGCCTTTTTCTTCTGCAGCAAGAAAG +
Preference number: 6 (lower is better)
Translates to: STLHSGVAGSLS*MTSPFSSAARK
Trigger: CTTTCTTGCTGCAGAAGAAAAAGGCGATGTCATTCAGGACAAAGATCCTGCTACTCCAGAGTGTAGCGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS CAA 72 bp ACAGGTTATGACTGTGAGGGCATAGCAGACCCAAAATaGGCAGAGGCGGTGGGTGTTTATTTCAGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: TGYDCEGIADPK*AEAVGVYFSLV
Trigger: AACAAGACTGAAATAAACACCCACCGCCTCTGCCAATTTTGGGTCTGCTATGCCCTCACAGTCATAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS CAA 90 bp ATTATCCCAGAAACTTCTGAGGCTCTCCGACAGGGTTCTGAAGAGTaGACATGTCTGACTGCAAATACTGCAAATCCGTCCACAAATACC +
Preference number: 6 (lower is better)
Translates to: IIPETSEALRQGSEE*TCLTANTANPSTNT
Trigger: GGTATTTGTGGACGGATTTGCAGTATTTGCAGTCAGACATGTCAACTCTTCAGAACCCTGTCGGAGAGCCTCAGAAGTTTCTGGGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS TCA 72 bp CCTGTGAAAGACAGTAGTCCGATTTTCTGGGCAGCCTaGGCTCTCTTATCAAGGGATAGTCTTTTATTCTTC +
Preference number: 6 (lower is better)
Translates to: PVKDSSPIFWAA*ALLSRDSLLFF
Trigger: GAAGAATAAAAGACTATCCCTTGATAAGAGAGCTCAGGCTGCCCAGAAAATCGGACTACTGTCTTTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS CCA 72 bp AGGCGGTGGGTGTTTATTTCAGTCTTGTTGCTAGATTaGAAAGACTCCTCCAAGAAATCAATTAAAGTCGGA +
Preference number: 6 (lower is better)
Translates to: RRWVFISVLLLD*KDSSKKSIKVG
Trigger: TCCGACTTTAATTGATTTCTTGGAGGAGTCTTTCCAATCTAGCAACAAGACTGAAATAAACACCCACCGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2
CDS GCA 72 bp CTCTCTTATCAAGGGATAGTCTTTTATTCTTCAGGATaGTGCCAAGCTCCAGAATCTTTTCTCTGTGAAAAA +
Preference number: 6 (lower is better)
Translates to: LSYQGIVFYSSG*CQAPESFLCEK
Trigger: TTTTTCACAGAGAAAAGATTCTGGAGCTTGGCAGCATCCTGAAGAATAAAAGACTATCCCTTGATAAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136906.2