RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARMCX4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049804

Ensembl transcript IDs: ENSMUST00000124226.3

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TACCTTACTTATGAAGAATCGGTTGGGTTTTGCTCATaGAGCATACTAAAAATATCTCAATCCAGACAAGAT +
Preference number: 3 (lower is better)
Translates to: YLTYEESVGFCS*SILKISQSRQD
Trigger: ATCTTGTCTGGATTGAGATATTTTTAGTATGCTTCATGAGCAAAACCCAACCGATTCTTCATAAGTAAGGTA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCTTCAGCCCCAGCCTaGGCTCCTGCCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHASAPA*APAPTP
Trigger: TGGAGTTGGGGCAGGAGCTCAGGCTGGGGCTGAAGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGAAGCGGGCACAGACTaGGGACAGGCGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTEAGTD*GQAPTP
Trigger: TGGGGTGGGCGCCTGTCCCCAGTCTGTGCCCGCTTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCCAGCCTGAGCTCCTaGCCCAACTCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPSLSS*PNSSLS
Trigger: GCTGAGGCTGGAGTTGGGGCAGGAGCTCAGGCTGGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCCTGGACCCTCCAGTaGTCTGGTCCCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTAWTLQ*SGPQHQ
Trigger: CTGGTGCTGGGGACCAGACCACTGGAGGGTCCAGGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCACAGGCTGTGGCTaGCCAGAGGCTTTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHATGCG*PEAFWS
Trigger: AGACCAGAAAGCCTCTGGTCAGCCACAGCCTGTGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCTCGTGCCAGCCCATaGTCCACTACTGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPRASP*STTGLV
Trigger: GACCAGTCCAGTAGTGGATCATGGGCTGGCACGAGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCCAAGAGCCTCCACTaGCCTGACTCCCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSKSLH*PDSPCQ
Trigger: CTGGCATGGGGAGTCAGGTCAGTGGAGGCTCTTGGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCAGACACAGCTGGCCTaGACCCTCCAGTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHQTQLA*TLQWSG
Trigger: ACCAGACCACTGGAGGGTCCAGGCCAGCTGTGTCTG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGACACTGCACTGACCTaGGTCCCAGTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTDTALT*VPVPSQ
Trigger: CTGGCTTGGCACTGGGACTCAGGTCAGTGCAGTGTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCCAGGACACTGCACTaGCCTGAGTCCCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSRTLH*PESQCQ
Trigger: TTGGCACTGGGACTCAGGTCAGTGCAGTGTCCTGGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCAGATCACCAGTCCTaGAGTCGCCCAGCCCACATC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPDHQS*SRPAHI
Trigger: GATGTGGGCTGGGCGACTGCAGGACTGGTGATCTGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTTTGCCTTGGCCCCTaGTTTAGCCATGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVCLGP*FSHGTG
Trigger: GCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCCACCCCAGCCTCTaGCTTAGGCACAACATTGGA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHAHPSL*LRHNIG
Trigger: TCCAATGTTGTGCCTAAGGCAGAGGCTGGGGTGGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGAACCTGCACTGATCTaGTTCTCGGCCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHEPALI*FSAPVQ
Trigger: CTGGACTGGGGCCGAGAACCAGATCAGTGCAGGTTC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCCAGGGCCCAGCAATaGCCTGGTTTCCAGAGACAA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPRAQQ*PGFQRQ
Trigger: TTGTCTCTGGAAACCAGGCCATTGCTGGGCCCTGGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCTGGATGCCGCATTaGCCTGGTCTACAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHAWMPH*PGLQSQ
Trigger: CTGAGACTGTAGACCAGGCCAATGCGGCATCCAGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCATGTGCACTGGCTTTaGCCCTCCAACATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHHVHWL*PSNILA
Trigger: GGCCAGGATGTTGGAGGGCCAAAGCCAGTGCACATG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTACCATCCACCAGTCTaGTCTCCAGTGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHYHPPV*SPVPGQ
Trigger: TTGGCCTGGCACTGGAGATCAGACTGGTGGATGGTA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGATCCTCCAATAACATaGCCACCAGCACCACCCCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDPPIT*PPAPPQ
Trigger: CTGGGGTGGTGCTGGTGGTCATGTTATTGGAGGATC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATCTGGCCCAGCCCCTaGTTTGGGCACAGAATTCCG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTIWPSP*FGHRIP
Trigger: CGGAATTCTGTGCCCAAAGCAGGGGCTGGGCCAGAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGGCTCCGTTGTACCTaGCCCAGCTTCTGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTRLRCT*PSFCLR
Trigger: CCTAAGGCAGAAGCTGGGGCAGGTACAACGGAGCCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACCTACCCCAGCCTCTaGCTTAGGCGCAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTYPSL*LRRSIG
Trigger: TCCAATGCTGCGCCTAAGGCAGAGGCTGGGGTAGGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGTAGTCTGAGCTCCTaGCCAGATTGCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSSLSS*PDCSSG
Trigger: GCCACTGGAGCAATCTGGGCAGGAGCTCAGACTACT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTAGCCTGGTTCATGTaGACTGGCTTTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVAWFM*TGFGPP
Trigger: TGGAGGGCCAAAGCCAGTGCACATGAACCAGGCTAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGCAGTTGTAGCTGCTaGCCCAGCCTCAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSSCSC*PSLSPS
Trigger: ACTAGGGCTGAGGCTGGGGCAGCAGCTACAACTGCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGAAGCAGTTGTAGCTaGTGCCCCAGCCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTRSSCS*CPSLSP
Trigger: AGGGCTGAGGCTGGGGCAGCAGCTACAACTGCTTCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCTCAACTCTAGCCCCTaGCTCAGCTCCGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLNSSP*LSSGFR
Trigger: TCTGAAGCCGGAGCTGAGGCAGGGGCTAGAGTTGAG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCCTGTTCCTGTCCCTaGCCCTGTCCCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPCSCP*PCPCSN
Trigger: ATTGGAACAGGGACAGGGGCAGGGACAGGAACAGGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTGAACCTCTACCCCTaGTCCCACCCCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLNLYP*SHPCPC
Trigger: ACAGGGACAGGGGTGGGAGCAGGGGTAGAGGTTCAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCATACACCCATTCCTaGCCCAGGGACCATCGATGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPYTHS*PRDHRW
Trigger: CCATCGATGGTCCCTGGGGCAGGAATGGGTGTATGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATATTGGCCACAGGCTGTaGCTGACCAGAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHIGHRL*LTRGFL
Trigger: CAGAAAGCCTCTGGTCAGCCACAGCCTGTGGCCAAT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCTCATTCTGGCAATTaGCCACAGGCTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPHSGN*PQAVAD
Trigger: GTCAGCCACAGCCTGTGGCCAATTGCCAGAATGAGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCTTGGCTCCAGGTGTaGTCTCACCCTGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSWLQV*SHPGNW
Trigger: CCAGTTCCCAGGGTGAGACCACACCTGGAGCCAAGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGACACTCCACTAGCCTaGACTGCAGGCCATGACCCA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTDTPLA*TAGHDP
Trigger: TGGGTCATGGCCTGCAGTCCAGGCTAGTGGAGTGTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCTCAGCCTCAACCTTaGTCTCAGCTTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPQPQP*SQLQPQ
Trigger: CTGAGGCTGAAGCTGAGACCAAGGTTGAGGCTGAGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATATTATGGCCACAGCCTaGGACTGTGCACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHIMATA*DCAQDF
Trigger: GAAGTCCTGTGCACAGTCTCAGGCTGTGGCCATAAT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCTTCATTCTGAGAACTaGCCACAGCCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLHSEN*PQPGAE
Trigger: CTCAGCCCCAGGCTGTGGTCAGTTCTCAGAATGAAG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGTCCCATCAGTAGTCTaGGCTCCTGCCCAGATTGCT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTVPSVV*APAQIA
Trigger: AGCAATCTGGGCAGGAGCTCAGACTACTGATGGGAC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGACCTTCCACTGGATTaGTCCTCAGATCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDLPLD*SSDPNL
Trigger: CAGGTTGGGATCTGAGGATCAATCCAGTGGAAGGTC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACTCCTCCACTAGACTaGTCCTCAGACACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTPPLD*SSDTAG
Trigger: GCCAGCTGTGTCTGAGGATCAGTCTAGTGGAGGAGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCACAGCCTGAGACTGTaGACAGGACTTCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTHSLRL*TGLRVH
Trigger: GTGGACACGAAGTCCTGTGCACAGTCTCAGGCTGTG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCCAGCCCAAGACACTaGACCAGTTTGGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSSPRH*TSLVLS
Trigger: GCTGAGAACCAAACTGGTGCAGTGTCTTGGGCTGGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGTTCCAAGCCTGGATaGCGCATTGGCCTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSSKPG*RIGLVY
Trigger: GTAGACCAGGCCAATGCGGCATCCAGGCTTGGAACT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCAGCCAGATTCCTCGTaGCAGCCCATGATCCACTAC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTQPDSS*QPMIHY
Trigger: GTAGTGGATCATGGGCTGGCACGAGGAATCTGGCTG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACCAGTCCAGGACACTaGACTGACCTGAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTSPGH*TDLSPS
Trigger: ACTGGGACTCAGGTCAGTGCAGTGTCCTGGACTGGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGGTGCCTGTAAGAGCTaGCTCTTCAGATCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHGACKS*LFRSGP
Trigger: TGGACCAGATCTGAAGAGGCAGCTCTTACAGGCACC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCGGCAGTTGCAGGAATaGACCTTGACTCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHRQLQE*TLTPVL
Trigger: CAGTACTGGAGTCAAGGTGCATTCCTGCAACTGCCG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCTTGTGGCCAAGGTCTaGTTCTGTTCCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHLVAKV*FCSPTT
Trigger: TGTGGTTGGGGAACAGAACCAGACCTTGGCCACAAG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCTCTCTTCCAGCCATaGCTTCACTTGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPLFQP*LHLWPR
Trigger: CCTTGGCCACAAGTGAAGCCATGGCTGGAAGAGAGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGGCAAGGCCTCATTCTaGCAATTGGCCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTGKASF*QLATGC
Trigger: ACAGCCTGTGGCCAATTGCCAGAATGAGGCCTTGCC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCTACAGTCTGGGACTaGGCAGAACCCGTCGTATCT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTATVWD*AEPVVS
Trigger: AGATACGACGGGTTCTGCCCAGTCCCAGACTGTAGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAATTTGCCGCAGTCTTaGCATGGGCAGAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHNLPQS*HGQSPL
Trigger: CAATGGGCTCTGCCCATGCCAAGACTGCGGCAAATT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGCAAGGCCTCAGCCTaGGAAGAAGCCAAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSKASA*EEAKAS
Trigger: ACTGGCTTTGGCTTCTTCCCAGGCTGAGGCCTTGCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATTGCTCCAGTGGCCTaGTCACCAGCACTTACCCAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTIAPVA*SPALTQ
Trigger: CTGGGTAAGTGCTGGTGACCAGGCCACTGGAGCAAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGATGCCGCATTGGCCTaGTCTACAGTCTCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDAALA*STVSVQ
Trigger: TTGGACTGAGACTGTAGACCAGGCCAATGCGGCATC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCCATGATCCACTACTaGACTGGTCTGCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPMIHY*TGLQTL
Trigger: CAGGGTCTGCAGACCAGTCCAGTAGTGGATCATGGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGACTCTCCATTGGCCTaGTCCAAAGGCCCAACCAAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTDSPLA*SKGPTK
Trigger: CTTGGTTGGGCCTTTGGACCAGGCCAATGGAGAGTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCTGAGACTCTCCATTaGCCTGGTCCAAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTAETLH*PGPKAQ
Trigger: TTGGGCCTTTGGACCAGGCCAATGGAGAGTCTCAGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGATTCTCCACCAGACTaGTCCCCAGAACCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTDSPPD*SPEPVQ
Trigger: CTGGACTGGTTCTGGGGACCAGTCTGGTGGAGAATC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCACTGGTTACAGCTTaGGGCTGGGTATCCGTTACA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSLVTA*GWVSVT
Trigger: TGTAACGGATACCCAGCCTCAAGCTGTAACCAGTGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATACCTCAACACCAACCTaGTCAGTAGTTCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHTSTPT*SVVPVQ
Trigger: CTGGACAGGAACTACTGATCAGGTTGGTGTTGAGGT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCAAGAACCCTCCACTaGGTTGGTCTGCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPRTLH*VGLQNL
Trigger: CAGATTCTGCAGACCAACTCAGTGGAGGGTTCTTGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAATCGTCCACTGGCCTaGTCCTCAGACCTAATCCAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTNRPLA*SSDLIQ
Trigger: CTGGATTAGGTCTGAGGATCAGGCCAGTGGACGATT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCTCCTTAGTGTCAACTaGAGCATCAAGCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHLLSVN*SIKPSL
Trigger: GAGGCTAGGCTTGATGCTGCAGTTGACACTAAGGAG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCGTGGCACTGGATGTTaGCTCAGTCTCTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTRGTGC*LSLYLG
Trigger: GCCAAGATAGAGACTGAGGCAACATCCAGTGCCACG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCCAGCCTGAGGCTGTaGACAAGTTTTTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPSLRL*TSFCVC
Trigger: ACAGACACAAAAACTTGTGCACAGCCTCAGGCTGGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATACTTGCCCCAGACTCTaGCTTAGGCACAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHTCPRL*LRHRIG
Trigger: TCCAATTCTGTGCCTAAGGCAGAGTCTGGGGCAAGT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTGCACTGGCTTTGTCTaGAACCCAGGTCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTCTGFV*NPGPIS
Trigger: ACTGATGGGACCTGGGTTGCAGACAAAGCCAGTGCA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCAGTCTGATCTCCAGTaGCAGGCCAAGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTQSDLQ*QAKTLH
Trigger: ATGGAGAGTCTTGGCCTGGCACTGGAGATCAGACTG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGGACCAAAATTCCATaGTGGTCCCACCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTRTKIP*WSHPRL
Trigger: AAGCCGTGGGTGGGACCAGCATGGAATTTTGGTCCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCATGGCTTCACTTGTaGCCAAGGTCTGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPWLHL*PRSGSV
Trigger: AACAGAACCAGACCTTGGCCACAAGTGAAGCCATGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCAGTGGTCTTATCATaGCTTCAGCCACAACTCCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPVVLS*LQPQLQ
Trigger: CTGGAGTTGTGGCTGAAGCCATGATAAGACCACTGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCTTGGCATCAGGCATaGCTTCAGTCTGATCACTGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPWHQA*LQSDHW
Trigger: CCAGTGATCAGACTGAAGCCATGCCTGATGCCAAGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCACAGGCTCAGTCTaGGTACAGGAAACCATATCT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHATGSV*VQETIS
Trigger: AGATATGGTTTCCTGTACCCAGACTGAGCCTGTGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTATTGGCATTGTCCTTaGCCACAGGCTCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTYWHCP*PQAQSG
Trigger: CCCAGACTGAGCCTGTGGCCAAGGACAATGCCAATA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGGTAAAGCCTCACTGTaGGAATTGGCTACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHGKASL*ELATVW
Trigger: CCAGACTGTAGCCAATTCCCACAGTGAGGCTTTACC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGCAAGGCTTCATTCTaGGAACTGACCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSKASF*ELTTAW
Trigger: CCAGGCTGTGGTCAGTTCCCAGAATGAAGCCTTGCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGACACTGCACCAGTTTaGTTCTCAGCTACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDTAPV*FSATVQ
Trigger: CTGGACTGTAGCTGAGAACCAAACTGGTGCAGTGTC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCTGGTTCATGTGCACTaGCTTTGGCCCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLVHVH*LWPSNI
Trigger: GATGTTGGAGGGCCAAAGCCAGTGCACATGAACCAG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTACAGCCACTAGTCTaGTCCACACTCCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVQPLV*STLPIQ
Trigger: TTGGATTGGGAGTGTGGACCAGACTAGTGGCTGTAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCTTTAGCTTTGGTCTaGGTCACTGCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHALALV*VTASFL
Trigger: CAAGAAAGAGGCAGTGACTCAGACCAAAGCTAAAGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGCCTAGCCTCAGATTaGGTCCTAGTCACACTCACA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSLASD*VLVTLT
Trigger: TGTGAGTGTGACTAGGACTCAATCTGAGGCTAGGCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGCAAAGCTTCATTCTaGGAACTGACCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSKASF*ELTTAW
Trigger: CCAGGCTGTGGTCAGTTCTCAGAATGAAGCTTTGCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTCTTCCCTAGTCCCTaGTGTGGATTCAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFFPSP*CGFSTG
Trigger: GCCAGTACTGAATCCACATCAGGGACTAGGGAAGAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACTGGTTTTGGTGTTTaGCTTGGCCCCTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTGFGV*LGPCFS
Trigger: GCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGAGGCTTTCTGGTCTaGCTTTGCTCCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHRGFLV*LCSCFR
Trigger: TCTAAAGCAGGAGCAAAGGCAGACCAGAAAGCCTCT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCTAGAACAGGGACCTTaGAGTCTACTTCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLEQGP*SLLQPQ
Trigger: CTGTGGCTGAAGTAGACTCCAAGGTCCCTGTTCTAG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAACCCTCCACTGAGTTaGTCTGCAGAATCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTNPPLS*SAESAQ
Trigger: TTGGGCAGATTCTGCAGACCAACTCAGTGGAGGGTT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTGTCCGCTCACACTCTaGGTTCTTCCCTTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTCPLTL*VLPLVN
Trigger: ATTAACCAAGGGAAGAACTCAGAGTGTGAGCGGACA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCATTGTTTCCACCAATaGACTGGTCTCAGACTGGGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTHCFHQ*TGLRLG
Trigger: ACCCAGTCTGAGACCAGTTCATTGGTGGAAACAATG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTACTTCCTTGGTCACTaGCAAGACCTCACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTYFLGH*QDLTLC
Trigger: ACACAGAGTGAGGTCTTGGCAGTGACCAAGGAAGTA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTCTGCCTTTGCTCCTaGTTTAGAAACGCCATTAGA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVCLCS*FRNAIR
Trigger: TCTAATGGCGTTTCTAAAGCAGGAGCAAAGGCAGAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTTCTGGTCTGCCTTTaGTCCTGCTTTAGAAACGCC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFLVCL*SCFRNA
Trigger: GGCGTTTCTAAAGCAGGAGCAAAGGCAGACCAGAAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATTAGGCTGAGCACCTaGCACAGTCACCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTIRLST*HSHHFR
Trigger: TCTGAAATGGTGACTGTGGCAGGTGCTCAGCCTAAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCCACTGAGTTGGTCTaGAGAATCTGCCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSTELV*RICPRS
Trigger: AGATCTTGGGCAGATTCTGCAGACCAACTCAGTGGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGACCCTTTAGTAGCTaGATCTCCATTCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHRPFSS*ISIPEP
Trigger: TGGTTCTGGAATGGAGATGCAGCTACTAAAGGGTCT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGAACTGGTCTCAGACTaGGTCTCTATCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTELVSD*VSISSS
Trigger: TGAGGAAGAGATAGAGACCCAGTCTGAGACCAGTTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCATGGTTACTTCCTTaGCTTGGGATGTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSWLLP*LGMWIQ
Trigger: CTGAATCCACATCCCAAGCCAAGGAAGTAACCATGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTACGAGCTTCTGCTTTaGTCTGGGTCATTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHYELLL*SGSLLL
Trigger: AAGAAGCAATGACCCAGACCAAAGCAGAAGCTCGTA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCACAGTCTCTTCCAGTaGTCTTATCATGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTHSLFQ*SYHGFS
Trigger: GCTGAAGCCATGATAAGACCACTGGAAGAGACTGTG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATCATTCTTTGCCCCTaGCACAGCTTCAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTIILCP*HSFSQI
Trigger: AATCTGGCTGAAGCTGTGCCAGGGGCAAAGAATGAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCATCAGTCTGCGAACTaGTTTTGGTGTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTHQSAN*FWCLPW
Trigger: CCAAGGCAAACACCAAAACCAGTTCGCAGACTGATG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCCAAGACCTTCCACTaGATTGATCCTCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSKTFH*IDPQIP
Trigger: TGGGATCTGAGGATCAATCCAGTGGAAGGTCTTGGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTTAGCAGCATCAAACTaGTCTTTAGTGTCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHLAASN*SLVSSA
Trigger: GGCTGACGACACTAAAGACCAGTTTGATGCTGCTAA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTGCTGTTGGTGCATTaGCAATTAGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVLLVH*QLASLL
Trigger: CAAGAGACTTGCTAATTGCCAATGCACCAACAGCAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCTCCTGCACATGTCTaGTCTTCAAATCCAGATTTA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPPAHV*SSNPDL
Trigger: TAAATCTGGATTTGAAGATCAGACATGTGCAGGAGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATACTCCGTTGACTTTTTaGCTTTCACCTGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHTPLTF*LSPEMK
Trigger: CTTCATCTCAGGTGAAAGTCAAAAAGTCAACGGAGT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTTTTCAGCAGCAACTaGGATGTTATTCAGCGCATT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVFSSN*DVIQRI
Trigger: AATGCGCTGAATAACATCTCAGTTGCTGCTGAAAAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGCCACTTGCACATTTaGATTCAAGGGATAAGTGAC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSHLHI*IQGISD
Trigger: GTCACTTATCCCTTGAATTCAAATGTGCAAGTGGCT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTGGTTAATCTGTAAATaGAGTAGCAGGTACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTWLICK*SSRYQP
Trigger: GGGCTGGTACCTGCTACTGCATTTACAGATTAACCA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGAACCAAAATCCCATaGTGGTATCAGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTRTKIP*WYQPQL
Trigger: AAGCTGTGGCTGATACCAGCATGGGATTTTGGTTCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACTCCAGTACTGACTTaGCTTCTGAAGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTPVLT*LLKPSS
Trigger: TGAAGATGGCTTCAGAAGGCAAGTCAGTACTGGAGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCCTTCTCCAGTTTCTaGTTCAGTCTTGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSFSSF*FSLDSS
Trigger: ACTAGAGTCAAGACTGAACCAGAAACTGGAGAAGGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTTACTTCCTTGGCTTaGGATGTGGATTCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVTSLA*DVDSVK
Trigger: TTTGACTGAATCCACATCCCAAGCCAAGGAAGTAAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCATCATTTTGGATTATaGCCACAGCCTGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTHHFGL*PQPETV
Trigger: CACAGTCTCAGGCTGTGGCCATAATCCAAAATGATG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCTCAGTCTCTATCTTaGCCACAGTCTCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPQSLS*PQSQIV
Trigger: TACAATCTGAGACTGTGGCCAAGATAGAGACTGAGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTTTTGCTATCAACCTTaGAATCAGACAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHFCYQP*NQTRPQ
Trigger: CTGAGGCCTTGTCTGATTCCAAGGTTGATAGCAAAA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATGTGGATTCAGTACTaGCCTCATCTTTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTMWIQY*PHLSSQ
Trigger: CTGGGATGAAAGATGAGGCCAGTACTGAATCCACAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACCAAAATCCCATGCTaGTATCAGCCACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTKIPC*YQPQLE
Trigger: TTCAAGCTGTGGCTGATACCAGCATGGGATTTTGGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCTTTCTTTCACCTCTaGGTCACTACAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSFFHL*VTTICC
Trigger: GCAGCAGATTGTAGTGACCCAGAGGTGAAAGAAAGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGACTTTCACCTGAGATaGAGATTCATCCTCACATTT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDFHLR*RFILTF
Trigger: AAATGTGAGGATGAATCTTCATCTCAGGTGAAAGTC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTCAGTCAAAGTCACTaGCTCTGTCATGACCATTGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFSQSH*LCHDHC
Trigger: ACAATGGTCATGACAGAGGCAGTGACTTTGACTGAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCTTAGTCCAGCCACTTaGACATTTGAATTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLSPAT*TFEFKG
Trigger: TCCCTTGAATTCAAATGTGCAAGTGGCTGGACTAAG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAAAGATGTTGATCAGTaGTGTTGGTGCATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHKDVDQ*CWCIGN
Trigger: ATTGCCAATGCACCAACAGCACTGATCAACATCTTT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCTCAAATCCAGGTTTaGAACAACCACCAACTTGAT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPQIQV*NNHQLD
Trigger: ATCAAGTTGGTGGTTGTTCCAAACCTGGATTTGAGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCTTCAATACCAGGGCTaGATTCTCTACTTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHLQYQG*ILYLVH
Trigger: ATGAACTAAGTAGAGAATCCAGCCCTGGTATTGAAG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGTCTTAACCGTTCTATaGTTTTCAGCAGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTVLTVL*FSAATE
Trigger: CTCAGTTGCTGCTGAAAACCATAGAACGGTTAAGAC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGCATTCCTAAAACATaGTCCTTCGTTTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSIPKT*SFVSPL
Trigger: AAGTGGAGAAACGAAGGACCATGTTTTAGGAATGCT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTACTGAACCGGTCTTaGGGATATGTTTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLLNRS*GYVFPL
Trigger: AAGAGGGAAAACATATCCCCAAGACCGGTTCAGTAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAATTGGAATTACCCTTaGCCTTATTTCTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTNWNYP*PYFWHQ
Trigger: TTGGTGCCAGAAATAAGGTCAAGGGTAATTCCAATT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR TCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTTTTTGACTTTCACCTaGGATGAAGATTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHFLTFT*DEDSSS
Trigger: TGAGGATGAATCTTCATCTCAGGTGAAAGTCAAAAA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCTTATATCTGCCTCTaGTTCACAAATGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSYICL*FTNVLC
Trigger: GCAAAGGACATTTGTGAAGCAGAGGCAGATATAAGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATACAAGTTCTTATATCTaGCTCTGCTTCACAAATGTC +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHTSSYI*LCFTNV
Trigger: GACATTTGTGAAGCAGAGGCAGATATAAGAACTTGT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTCACAAATGTCCTTTaGATTGTCCCAAGCATCATT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFTNVL*IVPSII
Trigger: AATGATGCTTGGGACAATGCAAAGGACATTTGTGAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR GCA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCTAGTAATAGTCAGGTaGTTTATCAATCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHLVIVR*FINLSP
Trigger: TGGACTAAGATTGATAAAGCACCTGACTATTACTAG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCTGAGTTCTTCCCTTaGTTAATCTGTAAATGCAGT +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSEFFP*LICKCS
Trigger: ACTGCATTTACAGATTAACCAAGGGAAGAACTCAGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CCA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTTTTCAAGATCGTGTaGATCCAGATTAACAGTACG +
Preference number: 4 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFFKIV*IQINST
Trigger: CGTACTGTTAATCTGGATCCACACGATCTTGAAAAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CCCTGCTCCCACCCCTGTCCCTGTCCCTGTCCCTGTTCCTGTCCCTaGCCCTGTCCCTGTTCCAATCCCAGTCTCAGCTTCAGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: PCSHPCPCPCPCSCP*PCPCSNPSLSFSLR
Trigger: ACGGAGGCTGAAGCTGAGACTGGGATTGGAACAGGGACAGGGGCAGGGACAGGAACAGGGACAGGGACAGGGACAGGGGTGGGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp CCCAGTGCCAAGCCAGGCCCCACCAGTAGCCTGGTTCATGTGCACTaGCTTTGGCCCTCCAACATCCTGGCCACTGACCCCAACCCAAGG +
Preference number: 5 (lower is better)
Translates to: PSAKPGPTSSLVHVH*LWPSNILATDPNPR
Trigger: CCTTGGGTTGGGGTCAGTGGCCAGGATGTTGGAGGGCCAAAGCCAGTGCACATGAACCAGGCTACTGGTGGGGCCTGGCTTGGCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp TCTAGCCCCTGCCTCAGCTCCGGCTTCAGAAGCAGTTGTAGCTGCTaGCCCAGCCTCAGCCCTAGTCTCCACTCGCACCTCAGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: SSPCLSSGFRSSCSC*PSLSPSLHSHLSLN
Trigger: GTTGAGGCTGAGGTGCGAGTGGAGACTAGGGCTGAGGCTGGGGCAGCAGCTACAACTGCTTCTGAAGCCGGAGCTGAGGCAGGGGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp AACTCTAGCCCCTGCCTCAGCTCCGGCTTCAGAAGCAGTTGTAGCTaGTGCCCCAGCCTCAGCCCTAGTCTCCACTCGCACCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: NSSPCLSSGFRSSCS*CPSLSPSLHSHLSL
Trigger: GAGGCTGAGGTGCGAGTGGAGACTAGGGCTGAGGCTGGGGCAGCAGCTACAACTGCTTCTGAAGCCGGAGCTGAGGCAGGGGCTAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp TCCCCAGCCAGATTCCTCGTGCCAGCCCATGATCCACTACTGGACTaGTCTGCAGACCCTGATGTAGATACTCCACCAACCTGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: SPARFLVPAHDPLLD*SADPDVDTPPTWSP
Trigger: CGGAGACCAGGTTGGTGGAGTATCTACATCAGGGTCTGCAGACCAGTCCAGTAGTGGATCATGGGCTGGCACGAGGAATCTGGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp GTCTCAGCCTCTCTTCCAGCCATGGCTTCACTTGTGGCCAAGGTCTaGTTCTGTTCCCCAACCACAGTCTCCGTCTCGATTCTGGACCCA +
Preference number: 5 (lower is better)
Translates to: VSASLPAMASLVAKV*FCSPTTVSVSILDP
Trigger: TGGGTCCAGAATCGAGACGGAGACTGTGGTTGGGGAACAGAACCAGACCTTGGCCACAAGTGAAGCCATGGCTGGAAGAGAGGCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 90 bp TGCAGAATCTGCCCAAGATCTTCCAGCAGACTGAGCCTCAGACACTaGCTTGGAACCTCCACTAGGCTGGCCAATAGTGCCAGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: CRICPRSSSRLSLRH*LGTSTRLANSASPR
Trigger: TCTTGGGCTGGCACTATTGGCCAGCCTAGTGGAGGTTCCAAGTCAGTGTCTGAGGCTCAGTCTGCTGGAAGATCTTGGGCAGATTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CCCAGCATCAGGCAAGGCATCAGTCTGCGAACTGGTTTTGGTGTTTaGCTTGGCCCCTGCTTTAGCCATGGCACTGGCATTACCTTTACC +
Preference number: 5 (lower is better)
Translates to: PSIRQGISLRTGFGV*LGPCFSHGTGITFT
Trigger: GGTAAAGGTAATGCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACTGATGCCTTGCCTGATGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp CCAAGGTCTGGTTCTGTTCCCCAACCACAGTCTCCGTCTCGATTCTaGACCCATTTCTGGCATGTCCGCTCACACTCTGAGTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PRSGSVPQPQSPSRF*THFWHVRSHSEFFP
Trigger: AGGGAAGAACTCAGAGTGTGAGCGGACATGCCAGAAATGGGTCCAGAATCGAGACGGAGACTGTGGTTGGGGAACAGAACCAGACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 90 bp CCTTTTGTATTAGGTAAGGCTTCACCCTGGCTCTGGCCCGTAGCCTaGGCTCCTTCCTTAGACGTGGTATTGGCATTGTCCTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: PFVLGKASPWLWPVA*APSLDVVLALSLAT
Trigger: TGTGGCCAAGGACAATGCCAATACCACGTCTAAGGAAGGAGCTCAGGCTACGGGCCAGAGCCAGGGTGAAGCCTTACCTAATACAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CCCAGCCTGAGGCTGTGCACAAGTTTTTGTGTCTGTCCCAGCCGCTaGCTTACACTTGGCTTTGGCTTTCCCTCTAGCCTTACCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PSLRLCTSFCVCPSR*LTLGFGFPSSLTFC
Trigger: ACAAAAGGTAAGGCTAGAGGGAAAGCCAAAGCCAAGTGTAAGGCAGCGGCTGGGACAGACACAAAAACTTGTGCACAGCCTCAGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CCAAGACCCTTCATCACTGGTCTGATTCTCAAAACCAGGTTTGGCTaGACCATCCGACTGATCGCCAGTCCCAGTCCAAGATCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: PRPFITGLILKTRFG*TIRLIASPSPRSFP
Trigger: GGGGAAAGATCTTGGACTGGGACTGGCGATCAGTCGGATGGTGCAGCCAAACCTGGTTTTGAGAATCAGACCAGTGATGAAGGGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp CCTCCTTGTCAGCCTCAGCACCAGCCATATCATCATTTTGGATTATaGCCACAGCCTGAGACTGTGCACAGGACTTCGTGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: PPCQPQHQPYHHFGL*PQPETVHRTSCPLQ
Trigger: CTGGAGTGGACACGAAGTCCTGTGCACAGTCTCAGGCTGTGGCCATAATCCAAAATGATGATATGGCTGGTGCTGAGGCTGACAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 90 bp GCCTCAGCACCAGCCATATCATCATTTTGGATTATGGCCACAGCCTaGGACTGTGCACAGGACTTCGTGTCCACTCCAGTCACTACGACA +
Preference number: 5 (lower is better)
Translates to: ASAPAISSFWIMATA*DCAQDFVSTPVTTT
Trigger: TGTCGTAGTGACTGGAGTGGACACGAAGTCCTGTGCACAGTCTCAGGCTGTGGCCATAATCCAAAATGATGATATGGCTGGTGCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CAAGGCATCAGTCTGCGAACTGGTTTTGGTGTTTGCCTTGGCCCCTaGTTTAGCCATGGCACTGGCATTACCTTTACCCTTAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: QGISLRTGFGVCLGP*FSHGTGITFTLNLG
Trigger: GCCAAGGTTAAGGGTAAAGGTAATGCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACTGATGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp ATACTAACTATATTGCCAGCTCCAGCCCAAGACACTGCACCAGTTTaGTTCTCAGCTACAGTCCAGGTCCCAGTAGCCTGGTCCACAACC +
Preference number: 5 (lower is better)
Translates to: ILTILPAPAQDTAPV*FSATVQVPVAWSTT
Trigger: GGTTGTGGACCAGGCTACTGGGACCTGGACTGTAGCTGAGAACCAAACTGGTGCAGTGTCTTGGGCTGGAGCTGGCAATATAGTTAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp CAGCCCAAGACCCTTCATCACTGGTCTGATTCTCAAAACCAGGTTTaGCTGCACCATCCGACTGATCGCCAGTCCCAGTCCAAGATCTTT +
Preference number: 5 (lower is better)
Translates to: QPKTLHHWSDSQNQV*LHHPTDRQSQSKIF
Trigger: AAAGATCTTGGACTGGGACTGGCGATCAGTCGGATGGTGCAGCCAAACCTGGTTTTGAGAATCAGACCAGTGATGAAGGGTCTTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp TCTGTTCCCCAACCACAGTCTCCGTCTCGATTCTGGACCCATTTCTaGCATGTCCGCTCACACTCTGAGTTCTTCCCTTGGTTAATCTGT +
Preference number: 5 (lower is better)
Translates to: SVPQPQSPSRFWTHF*HVRSHSEFFPWLIC
Trigger: ACAGATTAACCAAGGGAAGAACTCAGAGTGTGAGCGGACATGCCAGAAATGGGTCCAGAATCGAGACGGAGACTGTGGTTGGGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CTCTTTTTCAGCCAATGTACGAGCTTCTGCTTTGGTCTGGGTCATTaGTTCTTTCTTGACCTCTGCCCTGCCAGCCATTGCCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: LFFSQCTSFCFGLGH*FFLDLCPASHCPSF
Trigger: AAAGCTTGGGCAATGGCTGGCAGGGCAGAGGTCAAGAAAGAAGCAATGACCCAGACCAAAGCAGAAGCTCGTACATTGGCTGAAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp ACCAATCCCATTCCAGTAATAATCATGAACATTAGGCTGAGCACCTaGCACAGTCACCATTTCAGAAGCGGGCACAGCCCCTACCATAGG +
Preference number: 5 (lower is better)
Translates to: TNPIPVIIMNIRLST*HSHHFRSGHSPYHR
Trigger: CCTATGGTAGGGGCTGTGCCCGCTTCTGAAATGGTGACTGTGGCAGGTGCTCAGCCTAATGTTCATGATTATTACTGGAATGGGATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 90 bp CCTTGGCTTGGGATGTGGATTCAGTCAAAGTCACTGCCTCTGTCATaGCCATTGTTTCCACCAATGAACTGGTCTCAGACTGGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: PWLGMWIQSKSLPLS*PLFPPMNWSQTGSL
Trigger: TAGAGACCCAGTCTGAGACCAGTTCATTGGTGGAAACAATGGTCATGACAGAGGCAGTGACTTTGACTGAATCCACATCCCAAGCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp ACCAGCCATATCATCATTTTGGATTATGGCCACAGCCTGAGACTGTaGACAGGACTTCGTGTCCACTCCAGTCACTACGACAGACATATC +
Preference number: 5 (lower is better)
Translates to: TSHIIILDYGHSLRL*TGLRVHSSHYDRHI
Trigger: GATATGTCTGTCGTAGTGACTGGAGTGGACACGAAGTCCTGTGCACAGTCTCAGGCTGTGGCCATAATCCAAAATGATGATATGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp CTCTGCTTCACAAATGTCCTTTGCATTGTCCCAAGCATCATTCTTTaGCCCTGGCACAGCTTCAGCCAGATTGTTGGCAGCAATATGAGG +
Preference number: 5 (lower is better)
Translates to: LCFTNVLCIVPSIIL*PWHSFSQIVGSNMR
Trigger: CCTCATATTGCTGCCAACAATCTGGCTGAAGCTGTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 90 bp TGTGGATCCAGATTAACAGTACGCTTACAGCGGCAGTTGCAGGAATaGACCTTGACTCCAGTACTGACTTGCCTTCTGAAGCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: CGSRLTVRLQRQLQE*TLTPVLTCLLKPSS
Trigger: TGAAGATGGCTTCAGAAGGCAAGTCAGTACTGGAGTCAAGGTGCATTCCTGCAACTGCCGCTGTAAGCGTACTGTTAATCTGGATCCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp TTCACAAATGTCCTTTGCATTGTCCCAAGCATCATTCTTTGCCCCTaGCACAGCTTCAGCCAGATTGTTGGCAGCAATATGAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: FTNVLCIVPSIILCP*HSFSQIVGSNMRLT
Trigger: GGTCAGCCTCATATTGCTGCCAACAATCTGGCTGAAGCTGTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp AGCTACAACCCAAGACCCCTTTTCACTGGCCTGATCTTCAAACCTTaGCTTAACCTCAACACCAACCTGATCAGTAGTTCCTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SYNPRPLFTGLIFKP*LNLNTNLISSSCPG
Trigger: TCCTGGACAGGAACTACTGATCAGGTTGGTGTTGAGGTTAAGCCAAGGTTTGAAGATCAGGCCAGTGAAAAGGGGTCTTGGGTTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp GCTTTGCATAGACCCTATTGTCTCCAGTGGCTTCTACCTGTGAACTaGATAGACCTTTATCCCTTGCCCCAAGCAAAGCTTCATTCTGAG +
Preference number: 5 (lower is better)
Translates to: ALHRPYCLQWLLPVN*IDLYPLPQAKLHSE
Trigger: CTCAGAATGAAGCTTTGCTTGGGGCAAGGGATAAAGGTCTATCCAGTTCACAGGTAGAAGCCACTGGAGACAATAGGGTCTATGCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 90 bp AGATTCTCCTTAGTGTCAACTGCAGCATCAAGCCTAGCCTCAGATTaGGTCCTAGTCACACTCACAGTCTCTTCCAGTGGTCTTATCATG +
Preference number: 5 (lower is better)
Translates to: RFSLVSTAASSLASD*VLVTLTVSSSGLIM
Trigger: CATGATAAGACCACTGGAAGAGACTGTGAGTGTGACTAGGACTCAATCTGAGGCTAGGCTTGATGCTGCAGTTGACACTAAGGAGAATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 90 bp TCCTCAGTCCAGGAAACACTATTCTCCCAGTCTCCATCTATAGTCTaGAACCTGAATTTGATCCACCTCTCAGCAGCAATCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SSVQETLFSQSPSIV*NLNLIHLSAAIQSS
Trigger: TGAGGACTGGATTGCTGCTGAGAGGTGGATCAAATTCAGGTTTCAGACTATAGATGGAGACTGGGAGAATAGTGTTTCCTGGACTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCTCACTGTGGGAATaGGCTACAGTCTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHASLWE*ATVWDW
Trigger: CCAGTCCCAGACTGTAGCCAATTCCCACAGTGAGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCTGAGCAGAGCCCCTaGTACCTGTTCTTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHAEQSP*YLFLLL
Trigger: CAGGAGCAAGAACAGGTACAAGGGGCTCTGCTCAGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTCCAGGACACTGCATaGGTCTGGTCTACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVQDTA*VWSTAP
Trigger: TGGGGCTGTAGACCAGACCAATGCAGTGTCCTGGAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCTCAGACACTGACTaGGAACCTCCACTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHASDTD*EPPLGW
Trigger: CCAGCCTAGTGGAGGTTCCAAGTCAGTGTCTGAGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGTCATTGCTTCTTTCTaGACCTCTGCCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHVIASF*TSALPA
Trigger: GGCTGGCAGGGCAGAGGTCAAGAAAGAAGCAATGAC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCCAAGCATCATTCTTaGCCCCTGGCACAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPKHHS*PLAQLQ
Trigger: CTGAAGCTGTGCCAGGGGCAAAGAATGATGCTTGGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGACGTGGTATTGGCATaGTCCTTGGCCACAGGCTCA +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDVVLA*SLATGS
Trigger: TGAGCCTGTGGCCAAGGACAATGCCAATACCACGTC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCCTTAGGCGCAGCATaGGAACTGCCCCTGACCTTA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTALGAA*ELPLTL
Trigger: TAAGGTCAGGGGCAGTTCCAATGCTGCGCCTAAGGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGAACCTGCACTGGCTTaGTCTGCAACCCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTEPALA*SATQVP
Trigger: TGGGACCTGGGTTGCAGACAAAGCCAGTGCAGGTTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGGTATCAGCCACAGCTaGAACCTCTACCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTGISHS*NLYPCS
Trigger: GGAGCAGGGGTAGAGGTTCAAGCTGTGGCTGATACC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTTTTTGAGATCCTCCTaGTCAGCCTCAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHFLRSS*SASAPA
Trigger: GGCTGGTGCTGAGGCTGACAAGGAGGATCTCAAAAA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCTGTGCACAAGTTTTaGTGTCTGTCCCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTAVHKF*CLSQPL
Trigger: CAGCGGCTGGGACAGACACAAAAACTTGTGCACAGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCTCAGCTTGAGTTTTaGTCCCAGCCTGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPQLEF*SQPEAV
Trigger: CACAGCCTCAGGCTGGGACAAAAACTCAAGCTGAGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCCTTGGCCTTATTCTaGGCTCCAGGTGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPLALF*APGVVS
Trigger: TGAGACCACACCTGGAGCCAAGAATAAGGCCAAGGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGAACCCTCCACTGAGTaGGTCTGCAGAATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTEPSTE*VCRICP
Trigger: TGGGCAGATTCTGCAGACCAACTCAGTGGAGGGTTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTACCTCAGCCTCAACCTaGGTCTCAGCTTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTTSAST*VSASAS
Trigger: TGAGGCTGAAGCTGAGACCAAGGTTGAGGCTGAGGT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 90 bp GTCATGGATGGATTTTTAGAGAAATTCACCAGCATTCCTAAAACATaGTCCTTCGTTTCTCCACTTCCCAGAGCCAACAAACGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: VMDGFLEKFTSIPKT*SFVSPLPRANKRRN
Trigger: ATTTCTCCGTTTGTTGGCTCTGGGAAGTGGAGAAACGAAGGACCATGTTTTAGGAATGCTGGTGAATTTCTCTAAAAATCCATCCATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATACTAGAACAGGGACCTaGGAGTCTACTTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHTRTGT*ESTSAT
Trigger: TGTGGCTGAAGTAGACTCCAAGGTCCCTGTTCTAGT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTCGTGGCACTGGATGTaGCCTCAGTCTCTATCTTGG +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSWHWM*PQSLSW
Trigger: CCAAGATAGAGACTGAGGCAACATCCAGTGCCACGA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGTTTTGGTGTTTGCCTaGGCCCCTGCTTTAGCCATG +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTVLVFA*APALAM
Trigger: CATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAAC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTCCTTAGACGTGGTATaGGCATTGTCCTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSLDVV*ALSLAT
Trigger: TGTGGCCAAGGACAATGCCAATACCACGTCTAAGGA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCTTACACTTGGCTTaGGCTTTCCCTCTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHALHLA*AFPLAL
Trigger: TAAGGCTAGAGGGAAAGCCAAAGCCAAGTGTAAGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAAGCCAAAGCCAGTATaGTACTTGCCCCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHKPKPV*YLPQTL
Trigger: CAGAGTCTGGGGCAAGTACAATACTGGCTTTGGCTT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGGATGTACCACCAGCTaGATCTACAGTTCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHGCTTS*IYSSKP
Trigger: AGGCTTGGAACTGTAGATCAAGCTGGTGGTACATCC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGCCTTAGACATGTTTTaGAGATCCTCCTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHALDMF*RSSLSA
Trigger: GGCTGACAAGGAGGATCTCAAAAACATGTCTAAGGC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCCTCAGTCTCTATCTaGGCCACAGTCTCAGATTGT +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTASVSI*ATVSDC
Trigger: ACAATCTGAGACTGTGGCCAAGATAGAGACTGAGGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATCACTGGTTACAGCTaGAGGCTGGGTATCCGTTAC +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTITGYS*RLGIRY
Trigger: GTAACGGATACCCAGCCTCAAGCTGTAACCAGTGAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCCCTTGACCTTAGTCTaGGTACCAGTCAAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTPLTLV*VPVKAV
Trigger: TACTGCCTTGACTGGTACCAAGACTAAGGTCAAGGG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCATTGGACCTAATCTaGTTCCTGGCACCAAGCAAG +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTALDLI*FLAPSK
Trigger: CTTGCTTGGTGCCAGGAACAAGATTAGGTCCAATGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCCAATACTAACTATATaGCCAGCTCCAGCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHPILTI*PAPAQD
Trigger: GTCTTGGGCTGGAGCTGGCAATATAGTTAGTATTGG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGACCTTCCACTGGATaGATCCTCAGATCCCAACCT +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTRPSTG*ILRSQP
Trigger: AGGTTGGGATCTGAGGATCAATCCAGTGGAAGGTCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGACTCCAGTACTGACTaGCCTTCTGAAGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTDSSTD*PSEAIF
Trigger: GAAGATGGCTTCAGAAGGCAAGTCAGTACTGGAGTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAAGGCTCTAAGTTTCTaGGCACAGGCTTTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHKALSF*AQALGR
Trigger: ACGACCTAAAGCCTGTGCCAAGAAACTTAGAGCCTT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGGTTACTTCCTTGGCTaGGGATGTGGATTCAGTCAA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTGYFLG*GCGFSQ
Trigger: TTGACTGAATCCACATCCCAAGCCAAGGAAGTAACC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTATCTTGACTACTTCCTaGGTCACTGCCAAGACCTCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTILTTS*VTAKTS
Trigger: TGAGGTCTTGGCAGTGACCAAGGAAGTAGTCAAGAT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGCCATATCATCATTTaGGATTATGGCCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSHIII*DYGHSL
Trigger: CAGGCTGTGGCCATAATCCAAAATGATGATATGGCT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCACTAGAATTGCCCTaGACCTTAGTCTTGGTACCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTALELP*TLVLVP
Trigger: TGGTACCAAGACTAAGGTCAAGGGCAATTCTAGTGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATATAGACCTTTATCCCTaGCCCCAAGCAAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHIDLYP*PQAKLH
Trigger: ATGAAGCTTTGCTTGGGGCAAGGGATAAAGGTCTAT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATAGTGCTGTTGGTGCATaGGCAATTAGCAAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHSAVGA*AISKSL
Trigger: AAGAGACTTGCTAATTGCCAATGCACCAACAGCACT...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATTTTACTGAACCGGTCTaGGGGATATGTTTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHFTEPV*GICFPS
Trigger: AGAGGGAAAACATATCCCCAAGACCGGTTCAGTAAA...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTCATGGTTACTTCCTaGGCTTGGGATGTGGATTCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFMVTS*AWDVDS
Trigger: TGAATCCACATCCCAAGCCAAGGAAGTAACCATGAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTAGCCTCAGCATCAGTTaGTGTAACTGCCTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTSLSIS*CNCLFH
Trigger: ATGAAAGAGGCAGTTACACAAACTGATGCTGAGGCT...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATGATTTAGTACCAGCATaGGACCTAATCTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHDLVPA*DLILFL
Trigger: CAGGAACAAGATTAGGTCCAATGCTGGTACTAAATC...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTCATCGTTCCAATCTaGACTACTTCCTTGGTCACT +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFIVPI*TTSLVT
Trigger: AGTGACCAAGGAAGTAGTCAAGATTGGAACGATGAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTCTCTTAACTTTATTCTaGGCACCAGGTAAAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTLLTLF*APGKAS
Trigger: TGAGGCTTTACCTGGTGCCAAGAATAAAGTTAAGAG...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGAATTGGAATTACCCTaGACCTTATTTCTGGCACCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTELELP*TLFLAP
Trigger: TGGTGCCAGAAATAAGGTCAAGGGTAATTCCAATTC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTTTCTTGCTAAAGATGTaGATCAGTGCTGTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTFLLKM*ISAVGA
Trigger: TGCACCAACAGCACTGATCAACATCTTTAGCAAGAA...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp CTAATGCAATTTACAATGCGCATCATGTCCAGGATGAAAAACCAAAATGTTACTGCCTTAGCCGTGACATaGTTATCACTTCTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: LMQFTMRIMSRMKNQNVTALAVT*LSLLFL
Trigger: TAAAAACAGAAGTGATAACAATGTCACGGCTAAGGC...AGTAACATTTTGGTTTTTCATCCTGGACATGATGCGCATTGTAAATTGCATTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS-3UTR CAA 90 bp GATCCTCATAGGCAACACCAGTTTCAAAATTCTAATGCAATTTACAATGCGCATCTTCACCTGGAAAGCTaGTTTTGTGTAATAATTTGC +
Preference number: 5 (lower is better)
Translates to: DPHRQHQFQNSNAIYNAHLHLES*FCVIIC
Trigger: GCAAATTATTACACAAAACAAGCTTTCCAGGTGAAG...ATGCGCATTGTAAATTGCATTAGAATTTTGAAACTGGTGTTGCCTATGAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp CCAGTCAAGGCAGTACCCTGGGAAGCGGGCACAGACTaGGGACAGGCGCCCACCCCAGCCTCTGCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: PVKAVPWEAGTD*GQAPTPASALG
Trigger: GCCTAAGGCAGAGGCTGGGGTGGGCGCCTGTCCCCAGTCTGTGCCCGCTTCCCAGGGTACTGCCTTGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp CCCTGCCTCAGCTCCGGCTTCAGAAGCAGTTGTAGCTaGTGCCCCAGCCTCAGCCCTAGTCTCCACTCGCAC +
Preference number: 6 (lower is better)
Translates to: PCLSSGFRSSCS*CPSLSPSLHSH
Trigger: GTGCGAGTGGAGACTAGGGCTGAGGCTGGGGCAGCAGCTACAACTGCTTCTGAAGCCGGAGCTGAGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp TGGTCCACACTCCCAATCCAAGAGCCTCCACTGACCTaGCTCCCCATGCCAGGCCAGGACGTGCCACTGGAC +
Preference number: 6 (lower is better)
Translates to: WSTLPIQEPPLT*LPMPGQDVPLD
Trigger: GTCCAGTGGCACGTCCTGGCCTGGCATGGGGAGTCAGGTCAGTGGAGGCTCTTGGATTGGGAGTGTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp GTGCCAAGCCAGGCCCCACCAGTAGCCTGGTTCATGTaGACTGGCTTTGGCCCTCCAACATCCTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: VPSQAPPVAWFM*TGFGPPTSWPL
Trigger: CAGTGGCCAGGATGTTGGAGGGCCAAAGCCAGTGCACATGAACCAGGCTACTGGTGGGGCCTGGCTTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp TGCCTCAGCTCCGGCTTCAGAAGCAGTTGTAGCTGCTaGCCCAGCCTCAGCCCTAGTCTCCACTCGCACCTC +
Preference number: 6 (lower is better)
Translates to: CLSSGFRSSCSC*PSLSPSLHSHL
Trigger: GAGGTGCGAGTGGAGACTAGGGCTGAGGCTGGGGCAGCAGCTACAACTGCTTCTGAAGCCGGAGCTGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp CACCCCTGTCCCTGTCCCTGTCCCTGTTCCTGTCCCTaGCCCTGTCCCTGTTCCAATCCCAGTCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: HPCPCPCPCSCP*PCPCSNPSLSF
Trigger: GAAGCTGAGACTGGGATTGGAACAGGGACAGGGGCAGGGACAGGAACAGGGACAGGGACAGGGACAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp AAGCCAGGCCCCACCAGTAGCCTGGTTCATGTGCACTaGCTTTGGCCCTCCAACATCCTGGCCACTGACCCC +
Preference number: 6 (lower is better)
Translates to: KPGPTSSLVHVH*LWPSNILATDP
Trigger: GGGGTCAGTGGCCAGGATGTTGGAGGGCCAAAGCCAGTGCACATGAACCAGGCTACTGGTGGGGCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp CCACCAGCACCACCCCAGGAAACTCCTCCACTAGACTaGTCCTCAGACACAGCTGGCCTGGACCCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: PPAPPQETPPLD*SSDTAGLDPPV
Trigger: CACTGGAGGGTCCAGGCCAGCTGTGTCTGAGGATCAGTCTAGTGGAGGAGTTTCCTGGGGTGGTGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp GTCTGCAACCCAGGTCCCATCAGTAGTCTGAGCTCCTaGCCAGATTGCTCCAGTGGCCTGGTCACCAGCACT +
Preference number: 6 (lower is better)
Translates to: VCNPGPISSLSS*PDCSSGLVTST
Trigger: AGTGCTGGTGACCAGGCCACTGGAGCAATCTGGGCAGGAGCTCAGACTACTGATGGGACCTGGGTTGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp TGGTCCCTGGGACCCAGCCTAGATTCTCCACCAGACTaGTCCCCAGAACCAGTCCAGCATCCTCCTCCACTA +
Preference number: 6 (lower is better)
Translates to: WSLGPSLDSPPD*SPEPVQHPPPL
Trigger: TAGTGGAGGAGGATGCTGGACTGGTTCTGGGGACCAGTCTGGTGGAGAATCTAGGCTGGGTCCCAGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp TCCACCAGTCTGATCTCCAGTGCCAGGCCAAGACTCTCCATTCGATaGGTCCCTGGGACCCAGCCTAGATTCTCCACCAGACTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: STSLISSARPRLSIR*VPGTQPRFSTRLVP
Trigger: GGGGACCAGTCTGGTGGAGAATCTAGGCTGGGTCCCAGGGACCAATCGAATGGAGAGTCTTGGCCTGGCACTGGAGATCAGACTGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp TCCACCAACCTGGTCTCCGGTTCCAGCCCAGGATGTACCACCAGCTaGATCTACAGTTCCAAGCCTGGATGCCGCATTGGCCTGGTCTAC +
Preference number: 6 (lower is better)
Translates to: STNLVSGSSPGCTTS*IYSSKPGCRIGLVY
Trigger: GTAGACCAGGCCAATGCGGCATCCAGGCTTGGAACTGTAGATCAAGCTGGTGGTACATCCTGGGCTGGAACCGGAGACCAGGTTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTGGTCTCCGGTTCCAGCCCAGGATGTACCACCAGCTaGATCTACAGTTCCAAGCCTGGATGCCGCATTGGC +
Preference number: 6 (lower is better)
Translates to: LVSGSSPGCTTS*IYSSKPGCRIG
Trigger: GCCAATGCGGCATCCAGGCTTGGAACTGTAGATCAAGCTGGTGGTACATCCTGGGCTGGAACCGGAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp TCCCAGTCCAAGATCTTTCCCCAGCCAGATTCCTCGTaGCAGCCCATGATCCACTACTGGACTGGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SQSKIFPQPDSS*QPMIHYWTGLQ
Trigger: CTGCAGACCAGTCCAGTAGTGGATCATGGGCTGGCACGAGGAATCTGGCTGGGGAAAGATCTTGGACTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp CTTAGCCTCACCGCCATCACAGGTGCCTGTAAGAGCTaGCTCTTCAGATCTGGTCCAGGACTCAGGACTGGT +
Preference number: 6 (lower is better)
Translates to: LSLTAITGACKS*LFRSGPGLRTG
Trigger: ACCAGTCCTGAGTCCTGGACCAGATCTGAAGAGGCAGCTCTTACAGGCACCTGTGATGGCGGTGAGGCTAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp TGGTCTGCAGACCCTGATGTAGATACTCCACCAACCTaGTCTCCGGTTCCAGCCCAGGATGTACCACCAGCT +
Preference number: 6 (lower is better)
Translates to: WSADPDVDTPPT*SPVPAQDVPPA
Trigger: AGCTGGTGGTACATCCTGGGCTGGAACCGGAGACCAGGTTGGTGGAGTATCTACATCAGGGTCTGCAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTGATCTCCAGTGCCAGGCCAAGACTCTCCATTCGATaGGTCCCTGGGACCCAGCCTAGATTCTCCACCAGA +
Preference number: 6 (lower is better)
Translates to: LISSARPRLSIR*VPGTQPRFSTR
Trigger: TCTGGTGGAGAATCTAGGCTGGGTCCCAGGGACCAATCGAATGGAGAGTCTTGGCCTGGCACTGGAGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TCAGCCCTAGTCTCCACTCGCACCTCAGCCTCAACCTaGGTCTCAGCTTCAGCCTCAGCCTTAGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SALVSTRTSAST*VSASASALASA
Trigger: AGCTGAAGCTAAGGCTGAGGCTGAAGCTGAGACCAAGGTTGAGGCTGAGGTGCGAGTGGAGACTAGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp TTAGGTAAGGCTTCACCCTGGCTCTGGCCCGTAGCCTaGGCTCCTTCCTTAGACGTGGTATTGGCATTGTCC +
Preference number: 6 (lower is better)
Translates to: LGKASPWLWPVA*APSLDVVLALS
Trigger: GGACAATGCCAATACCACGTCTAAGGAAGGAGCTCAGGCTACGGGCCAGAGCCAGGGTGAAGCCTTACCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp TCCCCAGAACCAGTCCAGCATCCTCCTCCACTAGTCTaGTCTACTCCACTAGCAGCCAGTTCCCCAGAGACA +
Preference number: 6 (lower is better)
Translates to: SPEPVQHPPPLV*STPLAASSPET
Trigger: TGTCTCTGGGGAACTGGCTGCTAGTGGAGTAGATCAGACTAGTGGAGGAGGATGCTGGACTGGTTCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp GGCCTCAGCTTGAGTTTTTGTCCCAGCCTGAGGCTGTaGACAAGTTTTTGTGTCTGTCCCAGCCGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: GLSLSFCPSLRL*TSFCVCPSRCL
Trigger: AAGGCAGCGGCTGGGACAGACACAAAAACTTGTGCACAGCCTCAGGCTGGGACAAAAACTCAAGCTGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp GGTTCTGTTCCCCAACCACAGTCTCCGTCTCGATTCTaGACCCATTTCTGGCATGTCCGCTCACACTCTGAG +
Preference number: 6 (lower is better)
Translates to: GSVPQPQSPSRF*THFWHVRSHSE
Trigger: CTCAGAGTGTGAGCGGACATGCCAGAAATGGGTCCAGAATCGAGACGGAGACTGTGGTTGGGGAACAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CCAGCATCAGGCAAGGCATCAGTCTGCGAACTGGTTTaGGTGTTTGCCTTGGCCCCTGCTTTAGCCATGGCA +
Preference number: 6 (lower is better)
Translates to: PASGKASVCELV*VFALAPALAMA
Trigger: TGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACTGATGCCTTGCCTGATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp TGGTCTGCAGAATCTGCCCAAGATCTTCCAGCAGACTaGGCCTCAGACACTGACTTGGAACCTCCACTAGGC +
Preference number: 6 (lower is better)
Translates to: WSAESAQDLPAD*ASDTDLEPPLG
Trigger: GCCTAGTGGAGGTTCCAAGTCAGTGTCTGAGGCTCAGTCTGCTGGAAGATCTTGGGCAGATTCTGCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGGCAAGGCATCAGTCTGCGAACTGGTTTTGGTGTTTaGCTTGGCCCCTGCTTTAGCCATGGCACTGGCATT +
Preference number: 6 (lower is better)
Translates to: RQGISLRTGFGV*LGPCFSHGTGI
Trigger: AATGCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACTGATGCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp CAAAGGCCCAACCAAGAACCCTCCACTGAGTTGGTCTaGAGAATCTGCCCAAGATCTTCCAGCAGACTGAGC +
Preference number: 6 (lower is better)
Translates to: QRPNQEPSTELV*RICPRSSSRLS
Trigger: GCTCAGTCTGCTGGAAGATCTTGGGCAGATTCTGCAGACCAACTCAGTGGAGGGTTCTTGGTTGGGCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp CAACCACAGTCTCCGTCTCGATTCTGGACCCATTTCTaGCATGTCCGCTCACACTCTGAGTTCTTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: QPQSPSRFWTHF*HVRSHSEFFPW
Trigger: CCAAGGGAAGAACTCAGAGTGTGAGCGGACATGCCAGAAATGGGTCCAGAATCGAGACGGAGACTGTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp TCTCTTCCAGCCATGGCTTCACTTGTGGCCAAGGTCTaGTTCTGTTCCCCAACCACAGTCTCCGTCTCGATT +
Preference number: 6 (lower is better)
Translates to: SLPAMASLVAKV*FCSPTTVSVSI
Trigger: AATCGAGACGGAGACTGTGGTTGGGGAACAGAACCAGACCTTGGCCACAAGTGAAGCCATGGCTGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp AGGATGTACCACCAGCTTGATCTACAGTTCCAAGCCTaGATGCCGCATTGGCCTGGTCTACAGTCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: RMYHQLDLQFQA*MPHWPGLQSQS
Trigger: GGACTGAGACTGTAGACCAGGCCAATGCGGCATCCAGGCTTGGAACTGTAGATCAAGCTGGTGGTACATCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp AGATTCCTCGTGCCAGCCCATGATCCACTACTGGACTaGTCTGCAGACCCTGATGTAGATACTCCACCAACC +
Preference number: 6 (lower is better)
Translates to: RFLVPAHDPLLD*SADPDVDTPPT
Trigger: GGTTGGTGGAGTATCTACATCAGGGTCTGCAGACCAGTCCAGTAGTGGATCATGGGCTGGCACGAGGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp TGGTCCAAAGGCCCAACCAAGAACCCTCCACTGAGTTaGTCTGCAGAATCTGCCCAAGATCTTCCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: WSKGPTKNPPLS*SAESAQDLPAD
Trigger: GTCTGCTGGAAGATCTTGGGCAGATTCTGCAGACCAACTCAGTGGAGGGTTCTTGGTTGGGCCTTTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TATATTGCCAGCTCCAGCCCAAGACACTGCACCAGTTaGGTTCTCAGCTACAGTCCAGGTCCCAGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: YIASSSPRHCTS*VLSYSPGPSSL
Trigger: CAGGCTACTGGGACCTGGACTGTAGCTGAGAACCAAACTGGTGCAGTGTCTTGGGCTGGAGCTGGCAATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTGGTCCAAAGGCCCAACCAAGAACCCTCCACTGAGTaGGTCTGCAGAATCTGCCCAAGATCTTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: LVQRPNQEPSTE*VCRICPRSSSR
Trigger: TCTGCTGGAAGATCTTGGGCAGATTCTGCAGACCAACTCAGTGGAGGGTTCTTGGTTGGGCCTTTGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp CCTCAGCTTGAGTTTTTGTCCCAGCCTGAGGCTGTGCACAAGTTTTaGTGTCTGTCCCAGCCGCTGCCTTACACTTGGCTTTGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: PQLEFLSQPEAVHKF*CLSQPLPYTWLWLS
Trigger: GGAAAGCCAAAGCCAAGTGTAAGGCAGCGGCTGGGACAGACACAAAAACTTGTGCACAGCCTCAGGCTGGGACAAAAACTCAAGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGCCAATGTACGAGCTTCTGCTTTGGTCTGGGTCATTaGTTCTTTCTTGACCTCTGCCCTGCCAGCCATTGC +
Preference number: 6 (lower is better)
Translates to: SQCTSFCFGLGH*FFLDLCPASHC
Trigger: GCAATGGCTGGCAGGGCAGAGGTCAAGAAAGAAGCAATGACCCAGACCAAAGCAGAAGCTCGTACATTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp GGCATCTTTCCCACCATCCATCGTGGCACTGGATGTTaGCTCAGTCTCTATCTTGGCCACAGTCTCAGATTG +
Preference number: 6 (lower is better)
Translates to: GIFPTIHRGTGC*LSLYLGHSLRL
Trigger: CAATCTGAGACTGTGGCCAAGATAGAGACTGAGGCAACATCCAGTGCCACGATGGATGGTGGGAAAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGGCTGTGCACAAGTTTTTGTGTCTGTCCCAGCCGCTaGCTTACACTTGGCTTTGGCTTTCCCTCTAGCCTT +
Preference number: 6 (lower is better)
Translates to: RLCTSFCVCPSR*LTLGFGFPSSL
Trigger: AAGGCTAGAGGGAAAGCCAAAGCCAAGTGTAAGGCAGCGGCTGGGACAGACACAAAAACTTGTGCACAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp CATTTCAGAAGCGGGCACAGCCCCTACCATAGGCTTTaGATAGACCCTATTGTCTCCAGTGGCTTCTACCTG +
Preference number: 6 (lower is better)
Translates to: HFRSGHSPYHRL*IDPIVSSGFYL
Trigger: CAGGTAGAAGCCACTGGAGACAATAGGGTCTATGCAAAGCCTATGGTAGGGGCTGTGCCCGCTTCTGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp TGTACCACCAGCTTGATCTACAGTTCCAAGCCTGGATaGCGCATTGGCCTGGTCTACAGTCTCAGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: CTTSLIYSSKPG*RIGLVYSLSPR
Trigger: TCTTGGACTGAGACTGTAGACCAGGCCAATGCGGCATCCAGGCTTGGAACTGTAGATCAAGCTGGTGGTACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp TGTAAGTACAGTACCATCCACCAGTCTGATCTCCAGTaGCAGGCCAAGACTCTCCATTCGATTGGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: CKYSTIHQSDLQ*QAKTLHSIGPW
Trigger: CCAGGGACCAATCGAATGGAGAGTCTTGGCCTGGCACTGGAGATCAGACTGGTGGATGGTACTGTACTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp AAGGCATCAGTCTGCGAACTGGTTTTGGTGTTTGCCTaGGCCCCTGCTTTAGCCATGGCACTGGCATTACCT +
Preference number: 6 (lower is better)
Translates to: KASVCELVLVFA*APALAMALALP
Trigger: AGGTAATGCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACTGATGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp GAGTTTTTGTCCCAGCCTGAGGCTGTGCACAAGTTTTaGTGTCTGTCCCAGCCGCTGCCTTACACTTGGCTT +
Preference number: 6 (lower is better)
Translates to: EFLSQPEAVHKF*CLSQPLPYTWL
Trigger: AAGCCAAGTGTAAGGCAGCGGCTGGGACAGACACAAAAACTTGTGCACAGCCTCAGGCTGGGACAAAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp GCATCAGGCAAGGCATCAGTCTGCGAACTGGTTTTGGTGTTTGCCTaGGCCCCTGCTTTAGCCATGGCACTGGCATTACCTTTACCCTTA +
Preference number: 6 (lower is better)
Translates to: ASGKASVCELVLVFA*APALAMALALPLPL
Trigger: TAAGGGTAAAGGTAATGCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACTGATGCCTTGCCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp AATACTAACTATATTGCCAGCTCCAGCCCAAGACACTGCACCAGTTaGGTTCTCAGCTACAGTCCAGGTCCCAGTAGCCTGGTCCACAAC +
Preference number: 6 (lower is better)
Translates to: NTNYIASSSPRHCTS*VLSYSPGPSSLVHN
Trigger: GTTGTGGACCAGGCTACTGGGACCTGGACTGTAGCTGAGAACCAAACTGGTGCAGTGTCTTGGGCTGGAGCTGGCAATATAGTTAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGTCTGCGAACTGGTTTTGGTGTTTGCCTTGGCCCCTaGTTTAGCCATGGCACTGGCATTACCTTTACCCTT +
Preference number: 6 (lower is better)
Translates to: SLRTGFGVCLGP*FSHGTGITFTL
Trigger: AAGGGTAAAGGTAATGCCAGTGCCATGGCTAAAGCAGGGGCCAAGGCAAACACCAAAACCAGTTCGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTCCTTGTCAGCCTCAGCACCAGCCATATCATCATTTaGGATTATGGCCACAGCCTGAGACTGTGCACAGGA +
Preference number: 6 (lower is better)
Translates to: LLVSLSTSHIII*DYGHSLRLCTG
Trigger: TCCTGTGCACAGTCTCAGGCTGTGGCCATAATCCAAAATGATGATATGGCTGGTGCTGAGGCTGACAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TGGCATCTTTCCCACCATCCATCGTGGCACTGGATGTaGCCTCAGTCTCTATCTTGGCCACAGTCTCAGATT +
Preference number: 6 (lower is better)
Translates to: WHLSHHPSWHWM*PQSLSWPQSQI
Trigger: AATCTGAGACTGTGGCCAAGATAGAGACTGAGGCAACATCCAGTGCCACGATGGATGGTGGGAAAGATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp GGGCTGAGCAGAGCCCCTTGTACCTGTTCTTGCTCCTaGTTTAGTACCAGCATTGGACCTAATCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: GLSRAPCTCSCS*FSTSIGPNLVP
Trigger: AGGAACAAGATTAGGTCCAATGCTGGTACTAAATCAGGAGCAAGAACAGGTACAAGGGGCTCTGCTCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp ACACCAGCTACAACCCAAGACCCCTTTTCACTGGCCTaGTCTTCAAACCTTGGCTTAACCTCAACACCAACC +
Preference number: 6 (lower is better)
Translates to: TPATTQDPFSLA*SSNLGLTSTPT
Trigger: GGTTGGTGTTGAGGTTAAGCCAAGGTTTGAAGATCAGGCCAGTGAAAAGGGGTCTTGGGTTGTAGCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp ATCATCATTTTGGATTATGGCCACAGCCTGAGACTGTaGACAGGACTTCGTGTCCACTCCAGTCACTACGAC +
Preference number: 6 (lower is better)
Translates to: IIILDYGHSLRL*TGLRVHSSHYD
Trigger: GTCGTAGTGACTGGAGTGGACACGAAGTCCTGTGCACAGTCTCAGGCTGTGGCCATAATCCAAAATGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp ATTCCAGTAATAATCATGAACATTAGGCTGAGCACCTaGCACAGTCACCATTTCAGAAGCGGGCACAGCCCC +
Preference number: 6 (lower is better)
Translates to: IPVIIMNIRLST*HSHHFRSGHSP
Trigger: GGGGCTGTGCCCGCTTCTGAAATGGTGACTGTGGCAGGTGCTCAGCCTAATGTTCATGATTATTACTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp CATTCTTTGCCCCTGGCACAGCTTCAGCCAGATTGTTaGCAGCAATATGAGGCTGACCAGGAACCTTCATAT +
Preference number: 6 (lower is better)
Translates to: HSLPLAQLQPDC*QQYEADQEPSY
Trigger: ATATGAAGGTTCCTGGTCAGCCTCATATTGCTGCCAACAATCTGGCTGAAGCTGTGCCAGGGGCAAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp GTCCTTTGCATTGTCCCAAGCATCATTCTTTGCCCCTaGCACAGCTTCAGCCAGATTGTTGGCAGCAATATG +
Preference number: 6 (lower is better)
Translates to: VLCIVPSIILCP*HSFSQIVGSNM
Trigger: CATATTGCTGCCAACAATCTGGCTGAAGCTGTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp GCAGTTGCAGGAATGCACCTTGACTCCAGTACTGACTaGCCTTCTGAAGCCATCTTCACCTGGAAAGCTTGT +
Preference number: 6 (lower is better)
Translates to: AVAGMHLDSSTD*PSEAIFTWKAC
Trigger: ACAAGCTTTCCAGGTGAAGATGGCTTCAGAAGGCAAGTCAGTACTGGAGTCAAGGTGCATTCCTGCAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp CCTCTGCTTCACAAATGTCCTTTGCATTGTCCCAAGCATCATTCTTaGCCCCTGGCACAGCTTCAGCCAGATTGTTGGCAGCAATATGAG +
Preference number: 6 (lower is better)
Translates to: PLLHKCPLHCPKHHS*PLAQLQPDCWQQYE
Trigger: CTCATATTGCTGCCAACAATCTGGCTGAAGCTGTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp TCAAGATCGTGTGGATCCAGATTAACAGTACGCTTACAGCGGCAGTaGCAGGAATGCACCTTGACTCCAGTACTGACTTGCCTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SRSCGSRLTVRLQRQ*QECTLTPVLTCLLK
Trigger: CTTCAGAAGGCAAGTCAGTACTGGAGTCAAGGTGCATTCCTGCAACTGCCGCTGTAAGCGTACTGTTAATCTGGATCCACACGATCTTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp CAGCCACAACTCCAGTCTCATTCATCGTTCCAATCTTaGCTACTTCCTTGGTCACTGCCAAGACCTCACTCT +
Preference number: 6 (lower is better)
Translates to: QPQLQSHSSFQS*LLPWSLPRPHS
Trigger: AGAGTGAGGTCTTGGCAGTGACCAAGGAAGTAGTCAAGATTGGAACGATGAATGAGACTGGAGTTGTGGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp TTAGTGTCAACTGCAGCATCAAGCCTAGCCTCAGATTaGGTCCTAGTCACACTCACAGTCTCTTCCAGTGGT +
Preference number: 6 (lower is better)
Translates to: LVSTAASSLASD*VLVTLTVSSSG
Trigger: ACCACTGGAAGAGACTGTGAGTGTGACTAGGACTCAATCTGAGGCTAGGCTTGATGCTGCAGTTGACACTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGGCTGACCAGGAACCTTCATATCTATCCCAGACCCTaGCTTAGACATGTTTTTGAGATCCTCCTTGTCAGC +
Preference number: 6 (lower is better)
Translates to: RLTRNLHIYPRP*LRHVFEILLVS
Trigger: GCTGACAAGGAGGATCTCAAAAACATGTCTAAGGCAGGGTCTGGGATAGATATGAAGGTTCCTGGTCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp CAGTTGCAGGAATGCACCTTGACTCCAGTACTGACTTaGCTTCTGAAGCCATCTTCACCTGGAAAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: QLQECTLTPVLT*LLKPSSPGKLV
Trigger: AACAAGCTTTCCAGGTGAAGATGGCTTCAGAAGGCAAGTCAGTACTGGAGTCAAGGTGCATTCCTGCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGATTAACAGTACGCTTACAGCGGCAGTTGCAGGAATaGACCTTGACTCCAGTACTGACTTGCCTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: RLTVRLQRQLQE*TLTPVLTCLLK
Trigger: CTTCAGAAGGCAAGTCAGTACTGGAGTCAAGGTGCATTCCTGCAACTGCCGCTGTAAGCGTACTGTTAATCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp CCAAGACCCCTTTTCACTGGCCTGATCTTCAAACCTTaGCTTAACCTCAACACCAACCTGATCAGTAGTTCC +
Preference number: 6 (lower is better)
Translates to: PRPLFTGLIFKP*LNLNTNLISSS
Trigger: GGAACTACTGATCAGGTTGGTGTTGAGGTTAAGCCAAGGTTTGAAGATCAGGCCAGTGAAAAGGGGTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TGGTCTCAGACTGGGTCTCTATCTCTTCCTCAAGCATaGTCTTGGCCTGACAGTTGCCACTGGATCTTACTA +
Preference number: 6 (lower is better)
Translates to: WSQTGSLSLPQA*SWPDSCHWILL
Trigger: TAGTAAGATCCAGTGGCAACTGTCAGGCCAAGACAATGCTTGAGGAAGAGATAGAGACCCAGTCTGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TCAGCCACAACTCCAGTCTCATTCATCGTTCCAATCTaGACTACTTCCTTGGTCACTGCCAAGACCTCACTC +
Preference number: 6 (lower is better)
Translates to: SATTPVSFIVPI*TTSLVTAKTSL
Trigger: GAGTGAGGTCTTGGCAGTGACCAAGGAAGTAGTCAAGATTGGAACGATGAATGAGACTGGAGTTGTGGCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CAACCTTGGAATCAGACAAGGCCTCAGCTTGAGTTTTaGTCCCAGCCTGAGGCTGTGCACAAGTTTTTGTGT +
Preference number: 6 (lower is better)
Translates to: QPWNQTRPQLEF*SQPEAVHKFLC
Trigger: ACACAAAAACTTGTGCACAGCCTCAGGCTGGGACAAAAACTCAAGCTGAGGCCTTGTCTGATTCCAAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp ATCATGGCTTCAGCCACAACTCCAGTCTCATTCATCGTTCCAATCTaGACTACTTCCTTGGTCACTGCCAAGACCTCACTCTGTGTCACT +
Preference number: 6 (lower is better)
Translates to: IMASATTPVSFIVPI*TTSLVTAKTSLCVT
Trigger: AGTGACACAGAGTGAGGTCTTGGCAGTGACCAAGGAAGTAGTCAAGATTGGAACGATGAATGAGACTGGAGTTGTGGCTGAAGCCATGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp GGGATGTGGATTCAGTCAAAGTCACTGCCTCTGTCATaGCCATTGTTTCCACCAATGAACTGGTCTCAGACT +
Preference number: 6 (lower is better)
Translates to: GMWIQSKSLPLS*PLFPPMNWSQT
Trigger: AGTCTGAGACCAGTTCATTGGTGGAAACAATGGTCATGACAGAGGCAGTGACTTTGACTGAATCCACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp ATGACCATTGTTTCCACCAATGAACTGGTCTCAGACTaGGTCTCTATCTCTTCCTCAAGCATTGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MTIVSTNELVSD*VSISSSSIVLA
Trigger: GGCCAAGACAATGCTTGAGGAAGAGATAGAGACCCAGTCTGAGACCAGTTCATTGGTGGAAACAATGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp CAAGACCTTATGTCAACTCCATTAGCAGCATCAAACTaGTCTTTAGTGTCGTCAGCCTTATCCCCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: QDLMSTPLAASN*SLVSSALSPVP
Trigger: TGGGACTGGGGATAAGGCTGACGACACTAAAGACCAGTTTGATGCTGCTAATGGAGTTGACATAAGGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTTATATCTGCCTCTGCTTCACAAATGTCCTTTGCATaGTCCCAAGCATCATTCTTTGCCCCTGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: LISASASQMSFA*SQASFFAPGTA
Trigger: AGCTGTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAAGCAGAGGCAGATATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTTGCTCCTGATTTAGTACCAGCATTGGACCTAATCTaGTTCCTGGCACCAAGCAAGGCTTCATTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: LAPDLVPALDLI*FLAPSKASFWE
Trigger: TTCCCAGAATGAAGCCTTGCTTGGTGCCAGGAACAAGATTAGGTCCAATGCTGGTACTAAATCAGGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp CTTGTACCTGTTCTTGCTCCTGATTTAGTACCAGCATaGGACCTAATCTTGTTCCTGGCACCAAGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: LVPVLAPDLVPA*DLILFLAPSKA
Trigger: AGCCTTGCTTGGTGCCAGGAACAAGATTAGGTCCAATGCTGGTACTAAATCAGGAGCAAGAACAGGTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp AGCATCAGTTTGTGTAACTGCCTCTTTCATGGTTACTTCCTTGGCTaGGGATGTGGATTCAGTCAAAGTCACTGCCTCTGTCATGACCAT +
Preference number: 6 (lower is better)
Translates to: SISLCNCLFHGYFLG*GCGFSQSHCLCHDH
Trigger: ATGGTCATGACAGAGGCAGTGACTTTGACTGAATCCACATCCCAAGCCAAGGAAGTAACCATGAAAGAGGCAGTTACACAAACTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp AAGATTCTCCTTAGTGTCAACTGCAGCATCAAGCCTAGCCTCAGATaGAGTCCTAGTCACACTCACAGTCTCTTCCAGTGGTCTTATCAT +
Preference number: 6 (lower is better)
Translates to: KILLSVNCSIKPSLR*SPSHTHSLFQWSYH
Trigger: ATGATAAGACCACTGGAAGAGACTGTGAGTGTGACTAGGACTCAATCTGAGGCTAGGCTTGATGCTGCAGTTGACACTAAGGAGAATCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp TTCCCACCATCCATCGTGGCACTGGATGTTGCCTCAGTCTCTATCTaGGCCACAGTCTCAGATTGTATTAAACAAGTTCTTATATCTGCC +
Preference number: 6 (lower is better)
Translates to: FPPSIVALDVASVSI*ATVSDCIKQVLISA
Trigger: GGCAGATATAAGAACTTGTTTAATACAATCTGAGACTGTGGCCAAGATAGAGACTGAGGCAACATCCAGTGCCACGATGGATGGTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp GTACAGGAAACCATATCTATCCCAGTCTCTGCCTTAGCCGTGACATaGTTATCACTTCTGTTTTTATCCCCAGCATCAGGCAAGGCATCA +
Preference number: 6 (lower is better)
Translates to: VQETISIPVSALAVT*LSLLFLSPASGKAS
Trigger: TGATGCCTTGCCTGATGCTGGGGATAAAAACAGAAGTGATAACAATGTCACGGCTAAGGCAGAGACTGGGATAGATATGGTTTCCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp AGTTCTTATATCTGCCTCTGCTTCACAAATGTCCTTTaGATTGTCCCAAGCATCATTCTTTGCCCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSYICLCFTNVL*IVPSIILCPWH
Trigger: GTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAAGCAGAGGCAGATATAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TTGTGTAACTGCCTCTTTCATGGTTACTTCCTTGGCTaGGGATGTGGATTCAGTCAAAGTCACTGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LCNCLFHGYFLG*GCGFSQSHCLC
Trigger: ACAGAGGCAGTGACTTTGACTGAATCCACATCCCAAGCCAAGGAAGTAACCATGAAAGAGGCAGTTACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TCAGTTTGTGTAACTGCCTCTTTCATGGTTACTTCCTaGGCTTGGGATGTGGATTCAGTCAAAGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: SVCVTASFMVTS*AWDVDSVKVTA
Trigger: GGCAGTGACTTTGACTGAATCCACATCCCAAGCCAAGGAAGTAACCATGAAAGAGGCAGTTACACAAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp GTATCCGTTACATTAACATCAGTCATTGCCTTAGCATaGGCATCTTTCCCACCATCCATCGTGGCACTGGAT +
Preference number: 6 (lower is better)
Translates to: VSVTLTSVIALA*ASFPPSIVALD
Trigger: ATCCAGTGCCACGATGGATGGTGGGAAAGATGCCAATGCTAAGGCAATGACTGATGTTAATGTAACGGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp ACCATATCTATCCCAGTCTCTGCCTTAGCCGTGACATaGTTATCACTTCTGTTTTTATCCCCAGCATCAGGC +
Preference number: 6 (lower is better)
Translates to: TISIPVSALAVT*LSLLFLSPASG
Trigger: GCCTGATGCTGGGGATAAAAACAGAAGTGATAACAATGTCACGGCTAAGGCAGAGACTGGGATAGATATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp ATTCATCGTTCCAATCTTGACTACTTCCTTGGTCACTaGCAAGACCTCACTCTGTGTCACTGTTACTCTGTT +
Preference number: 6 (lower is better)
Translates to: IHRSNLDYFLGH*QDLTLCHCYSV
Trigger: AACAGAGTAACAGTGACACAGAGTGAGGTCTTGGCAGTGACCAAGGAAGTAGTCAAGATTGGAACGATGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp CCATCGTGGCACTGGATGTTGCCTCAGTCTCTATCTTaGCCACAGTCTCAGATTGTATTAAACAAGTTCTTA +
Preference number: 6 (lower is better)
Translates to: PSWHWMLPQSLS*PQSQIVLNKFL
Trigger: TAAGAACTTGTTTAATACAATCTGAGACTGTGGCCAAGATAGAGACTGAGGCAACATCCAGTGCCACGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp AAGTTCTTATATCTGCCTCTGCTTCACAAATGTCCTTaGCATTGTCCCAAGCATCATTCTTTGCCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: KFLYLPLLHKCP*HCPKHHSLPLA
Trigger: TGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAAGCAGAGGCAGATATAAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 72 bp TCCATCGTGGCACTGGATGTTGCCTCAGTCTCTATCTaGGCCACAGTCTCAGATTGTATTAAACAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: SIVALDVASVSI*ATVSDCIKQVL
Trigger: AAGAACTTGTTTAATACAATCTGAGACTGTGGCCAAGATAGAGACTGAGGCAACATCCAGTGCCACGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp GTATTAAACAAGTTCTTATATCTGCCTCTGCTTCACAAATGTCCTTaGCATTGTCCCAAGCATCATTCTTTGCCCCTGGCACAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: VLNKFLYLPLLHKCP*HCPKHHSLPLAQLQ
Trigger: CTGAAGCTGTGCCAGGGGCAAAGAATGATGCTTGGGACAATGCAAAGGACATTTGTGAAGCAGAGGCAGATATAAGAACTTGTTTAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS GCA 72 bp GACAGACATATCATTAAGATTCTCCTTAGTGTCAACTaGAGCATCAAGCCTAGCCTCAGATTGAGTCCTAGT +
Preference number: 6 (lower is better)
Translates to: DRHIIKILLSVN*SIKPSLRLSPS
Trigger: ACTAGGACTCAATCTGAGGCTAGGCTTGATGCTGCAGTTGACACTAAGGAGAATCTTAATGATATGTCTGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS TCA 72 bp TCGATGGATATATGCCCCTTGACTCCGTTGACTTTTTaGCTTTCACCTGAGATGAAGATTCATCCTCACATT +
Preference number: 6 (lower is better)
Translates to: SMDICPLTPLTF*LSPEMKIHPHI
Trigger: AATGTGAGGATGAATCTTCATCTCAGGTGAAAGTCAAAAAGTCAACGGAGTCAAGGGGCATATATCCATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CCA 72 bp GGATTTTTAGAGAAATTCACCAGCATTCCTAAAACATaGTCCTTCGTTTCTCCACTTCCCAGAGCCAACAAA +
Preference number: 6 (lower is better)
Translates to: GFLEKFTSIPKT*SFVSPLPRANK
Trigger: TTTGTTGGCTCTGGGAAGTGGAGAAACGAAGGACCATGTTTTAGGAATGCTGGTGAATTTCTCTAAAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp GTACTGACTTGCCTTCTGAAGCCATCTTCACCTGGAAAGCTTGTTTaGTGTAATAATTTGCTTTCCGAACAAACAATGGTTCCATCCCAT +
Preference number: 6 (lower is better)
Translates to: VLTCLLKPSSPGKLV*CNNLLSEQTMVPSH
Trigger: ATGGGATGGAACCATTGTTTGTTCGGAAAGCAAATTATTACACAAAACAAGCTTTCCAGGTGAAGATGGCTTCAGAAGGCAAGTCAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3
CDS CAA 90 bp TTTGTCTCTTTCTTGCTAAAGATGTTGATCAGTGCTGTTGGTGCATaGGCAATTAGCAAGTCTCTTGTCATGGATGGATTTTTAGAGAAA +
Preference number: 6 (lower is better)
Translates to: FVSFLLKMLISAVGA*AISKSLVMDGFLEK
Trigger: TTTCTCTAAAAATCCATCCATGACAAGAGACTTGCTAATTGCCAATGCACCAACAGCACTGATCAACATCTTTAGCAAGAAAGAGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124226.3