Pregenerated sensors for ARMCX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049047Ensembl transcript IDs: ENSMUST00000081834.10, ENSMUST00000086880.11, ENSMUST00000086884.5
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACTTAATGTCTTTCTCACATCATTTCCCCTTGACTCTGGTCTCATaGAATGCAACTAACTTCTCTACCCCATTCAGGGCTCCCTTTCGA | + |
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Preference number: 1 (lower is better) Translates to: NLMSFSHHFPLTLVS*NATNFSTPFRAPFR Trigger: TCGAAAGGGAGCCCTGAATGGGGTAGAGAAGTTAGTTGCATTCCATGAGACCAGAGTCAAGGGGAAATGATGTGAGAAAGACATTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACAGCCACCAAATCCTTTaGCCCCTCTTTGTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: MPTTRVGKYPFCYTLLDNSHQIL*PLFVLK Trigger: CTTCAGGACAAAGAGGGGGCAAAGGATTTGGTGGCT...GTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR CAA 90 bp | TGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTaGATAACACATTGTGTGGGGAGGACATTTATACTGAGCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: CPPPELESIHFATLS*ITHCVGRTFILSPV Trigger: AACTGGGCTCAGTATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTGCCCCCTCTTTGTCCTaGAGGCACACATCTATCAGA | + |
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Preference number: 2 (lower is better) Translates to: TRVGKYPFCYTLLDNTLCAPSLS*RHTSIR Trigger: TCTGATAGATGTGTGCCTTCAGGACAAAGAGGGGGC...ACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | GTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTCCCCTGGCTCTGTCCTCCCTaGAGCTTTAACCTGACTTAT | + |
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Preference number: 2 (lower is better) Translates to: VDILYLVNSECRTLKVFPWLCPP*SFNLTY Trigger: ATAAGTCAGGTTAAAGCTTCAGGGAGGACAGAGCCA...GGGGAACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTTGGCTCTGTCCTCCCTaGAGCTTTAACCTGACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPICIAKCPPPELESIHFWLCPP*SFNLTY Trigger: ATAAGTCAGGTTAAAGCTTCAGGGAGGACAGAGCCA...AAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACGTTTACAAGGTGTGCTaGTGCTGCTACACTACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: MPTTRVGKYPFCYTLLDNVYKVC*CCYTTK Trigger: CTTTGTAGTGTAGCAGCAGCAGCACACCTTGTAAAC...GTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTAATTCAAGAAGCCTCCTaGAATGCGTTTCCCATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RSVLPNAHHQSWKVSILLIQEAS*NAFPMV Trigger: AACCATGGGAAACGCATTGCAGGAGGCTTCTTGAAT...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAACAGCCTTATCAGCACCATCCTCTATCATTCTGAAGAGGAAACTTCAATCTGTATTGCCAAATaGCCACCACCAGAGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPNSLISTILYHSEEETSICIAK*PPPELE Trigger: TTCCAACTCTGGTGGTGGGCATTTGGCAATACAGAT...TGAAGTTTCCTCTTCAGAATGATAGAGGATGGTGCTGATAAGGCTGTTTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCTAAAGGTTTTCTACTCAGTACACATTCAAATGAATCAGCTGCTGCCCTCCCTACTTAGGATGAATTaGTTCGCTGTCACTTATAGG | + |
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Preference number: 2 (lower is better) Translates to: GLKVFYSVHIQMNQLLPSLLRMN*FAVTYR Trigger: CCTATAAGTGACAGCGAATCAATTCATCCTAAGTAG...GGAGGGCAGCAGCTGATTCATTTGAATGTGTACTGAGTAGAAAACCTTTAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTCCCTGAAGCTTTAACCTaGCTTATGGAGTCAGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: TKVNQNPSKLHSGYLKVLPEALT*LMESAT Trigger: GGTGGCTGACTCCATAAGTCAGGTTAAAGCTTCAGG...GAGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGTTTACAAGGTGTGCTaGTGCTGCTACACTACAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPICIAKCPPPELESIHFVYKVC*CCYTTK Trigger: CTTTGTAGTGTAGCAGCAGCAGCACACCTTGTAAAC...AAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTCAGCCACCAAATCCTTTaGCCCCTCTTTGTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TKVNQNPSKLHSGYLKVLSHQIL*PLFVLK Trigger: CTTCAGGACAAAGAGGGGGCAAAGGATTTGGTGGCT...GAGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTAGAAGCCTCCTGCAATaGGTTTCCCATGGTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LPICIAKCPPPELESIHFRSLLQ*VSHGFL Trigger: TAGAAAACCATGGGAAACGCATTGCAGGAGGCTTCT...AAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGGTTTACAAGGTGTGCTaGTGCTGCTACACTACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QNWQLKGFLCHINNVEKKVYKVC*CCYTTK Trigger: CTTTGTAGTGTAGCAGCAGCAGCACACCTTGTAAAC...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCGTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTATCTGTATTGCCAAATaGCCACCACCAGAGTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QRRHSLFSQFRMSDTEGVICIAK*PPPELE Trigger: TTCCAACTCTGGTGGTGGGCATTTGGCAATACAGAT...AACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGACGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTCAGAAGCCTCCTGCAATaGGTTTCCCATGGTTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TKVNQNPSKLHSGYLKVLRSLLQ*VSHGFL Trigger: TAGAAAACCATGGGAAACGCATTGCAGGAGGCTTCT...GAGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CCA 90 bp | GTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTCCCCTTGACTCTGGTCTCATaGAATGCAACTAACTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: VDILYLVNSECRTLKVFPLTLVS*NATNFS Trigger: AGAGAAGTTAGTTGCATTCCATGAGACCAGAGTCAA...GGGGAACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR CAA 90 bp | ACCATCCTCTATCATTCTGAAGAGGAAACTTCAAACCACCTGAGTTaGGGCCTAAAGGTTTTCTACTCAGTACACATTCAAATGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: TILYHSEEETSNHLS*GLKVFYSVHIQMNQ Trigger: CTGATTCATTTGAATGTGTACTGAGTAGAAAACCTTTAGGCCCAAACTCAGGTGGTTTGAAGTTTCCTCTTCAGAATGATAGAGGATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTTTTGACTACCATAAAGTCCCCTAACTTAATGTCTTTCTCACATCATTTCAAAATTGGCAGCTaGAAGGGTTCCTTTGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: AAVLTTIKSPNLMSFSHHFKIGS*KGSFAI Trigger: TATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGAA...ATGATGTGAGAAAGACATTAAGTTAGGGGACTTTATGGTAGTCAAAACAGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTTTCAAAATTGGCAGCTaGAAGGGTTCCTTTGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: TRVGKYPFCYTLLDNTLCFKIGS*KGSFAI Trigger: TATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGAA...ACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAAACCACCTGAGTTTGGGCCTAAAGGTTTTCTACTCAGTACACATTCAACTACTTAGGATGAATTaGTTCGCTGTCACTTATAGG | + |
|
Preference number: 2 (lower is better) Translates to: TSNHLSLGLKVFYSVHIQLLRMN*FAVTYR Trigger: CCTATAAGTGACAGCGAATCAATTCATCCTAAGTAG...TTGAATGTGTACTGAGTAGAAAACCTTTAGGCCCAAACTCAGGTGGTTTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | AACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTATTCAAGAAGCCTCCTaGAATGCGTTTCCCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: NKSQPKPIETTFWVLKGTIQEAS*NAFPMV Trigger: AACCATGGGAAACGCATTGCAGGAGGCTTCTTGAAT...AGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTGGGGAGGACATTTATATTGACTCTGGTCTCATaGAATGCAACTAACTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: IHFATLSLITHCVGRTFILTLVS*NATNFS Trigger: AGAGAAGTTAGTTGCATTCCATGAGACCAGAGTCAA...TATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTCGGAAAGTATCCATTTTaGTACACTCTCCTTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: TKVNQNPSKLHSGYLKVLGKYPF*YTLLDN Trigger: GTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCC...GAGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR GCA 90 bp | AACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTGTAACTGCTGCTATATaGCAGAATAATGTAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: NKSQPKPIETTFWVLKGTVTAAI*QNNVET Trigger: AGTCTCTACATTATTCTGGCATATAGCAGCAGTTAC...AGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR TCA 72 bp | CCTTTCGATGGCTCTGTCCTCCCTGAAGCTTTAACCTaGCTTATGGAGTCAGCCACCAAATCCTTTGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: PFDGSVLPEALT*LMESATKSFAP Trigger: GGGGGCAAAGGATTTGGTGGCTGACTCCATAAGTCAGGTTAAAGCTTCAGGGAGGACAGAGCCATCGAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR TCA 72 bp | CCATTCAGGGCTCCCTTTCGATGGCTCTGTCCTCCCTaGAGCTTTAACCTGACTTATGGAGTCAGCCACCAA | + |
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Preference number: 3 (lower is better) Translates to: PFRAPFRWLCPP*SFNLTYGVSHQ Trigger: TTGGTGGCTGACTCCATAAGTCAGGTTAAAGCTTCAGGGAGGACAGAGCCATCGAAAGGGAGCCCTGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CAA 90 bp | AGCTTTAACCTGACTTATGGAGTCAGCCACCAAATCCTTTGCCCCCTCTTTGTCGCTGAAAGGGTTCCTTaGCCATATAAACAACGTGGA | + |
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Preference number: 3 (lower is better) Translates to: SFNLTYGVSHQILCPLFVAERVP*PYKQRG Trigger: TCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGC...GACAAAGAGGGGGCAAAGGATTTGGTGGCTGACTCCATAAGTCAGGTTAAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR TCA 72 bp | CCCAAACAGCCTTATCAGCACCATCCTCTATCATTCTaGAGAGGAAACTTCAAACCACCTGAGTTTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PKQPYQHHPLSF*RGNFKPPEFGP Trigger: AGGCCCAAACTCAGGTGGTTTGAAGTTTCCTCTTCAGAATGATAGAGGATGGTGCTGATAAGGCTGTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR GCA 72 bp | TTTAACCTGACTTATGGAGTCAGCCACCAAATCCTTTaGCCCCTCTTTGTCCTGAAGGCACACATCTATCAG | + |
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Preference number: 3 (lower is better) Translates to: FNLTYGVSHQIL*PLFVLKAHIYQ Trigger: CTGATAGATGTGTGCCTTCAGGACAAAGAGGGGGCAAAGGATTTGGTGGCTGACTCCATAAGTCAGGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR GCA 72 bp | CAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTaGTACACTCTCCTTGATAACACATTGTGTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QMPTTRVGKYPF*YTLLDNTLCGE Trigger: CTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR GCA 72 bp | AGAGCGGCCTTGCACATAATGCTCTCTGGCCAATTATaGAGTTCTCCCCTTAGGATAAAAGGTTTACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RAALHIMLSGQL*SSPLRIKGLPL Trigger: AAGAGGTAAACCTTTTATCCTAAGGGGAGAACTGCATAATTGGCCAGAGAGCATTATGTGCAAGGCCGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR CCA 72 bp | TCTTTCTCACATCATTTCCCCTTGACTCTGGTCTCATaGAATGCAACTAACTTCTCTACCCCATTCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SFSHHFPLTLVS*NATNFSTPFRA Trigger: AGCCCTGAATGGGGTAGAGAAGTTAGTTGCATTCCATGAGACCAGAGTCAAGGGGAAATGATGTGAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CAA 90 bp | AGCTTTAACCTGACTTATGGAGTCAGCCACCAAATCCTTTGCCCCCTCTTTGTCTCCTTTCTTCTTCTGTaGTTTCTTTCCAGCATTAAC | + |
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Preference number: 3 (lower is better) Translates to: SFNLTYGVSHQILCPLFVSFLLL*FLSSIN Trigger: GTTAATGCTGGAAAGAAACAACAGAAGAAGAAAGGA...GACAAAGAGGGGGCAAAGGATTTGGTGGCTGACTCCATAAGTCAGGTTAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CAA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTACTCCTTGATAACACATaGTGTGGGGAGGACATTTAT | + |
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Preference number: 3 (lower is better) Translates to: RSVLPNAHHQSWKVSILLLLDNT*CGEDIY Trigger: ATAAATGTCCTCCCCACACAATGTGTTATCAAGGAG...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR TCA 72 bp | CTGCCCTCCAGTACTTGCCGTTTTCCAAACCTTTCCTaGGAGAACCAACATTCTTTGATAAACAAGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: LPSSTCRFPNLS*ENQHSLINKET Trigger: TGTTTCCTTGTTTATCAAAGAATGTTGGTTCTCTCAGGAAAGGTTTGGAAAACGGCAAGTACTGGAGGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR GCA 72 bp | AAAGGTTTACCTCTTTTAAGGCTTACCGATCTGTATTaGCAAATGCCCACCACCAGAGTTGGAAAGTATCCA | + |
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Preference number: 3 (lower is better) Translates to: KGLPLLRLTDLY*QMPTTRVGKYP Trigger: TGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAAGCCTTAAAAGAGGTAAACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAAACAGCCTTATCAGCACCATCCTCTATCATTCTGAAGAGGAAACTTCATCCTTTCTTCTTCTGTaGTTTCTTTCCAGCATTAAC | + |
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Preference number: 3 (lower is better) Translates to: LPNSLISTILYHSEEETSSFLLL*FLSSIN Trigger: GTTAATGCTGGAAAGAAACAACAGAAGAAGAAAGGA...TGAAGTTTCCTCTTCAGAATGATAGAGGATGGTGCTGATAAGGCTGTTTGGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CAA 90 bp | ATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTGGGGAGGACATTTATATCACATCATTTCCCCTaGACTCTGGTCTCATGGAAT | + |
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Preference number: 3 (lower is better) Translates to: IHFATLSLITHCVGRTFISHHFP*TLVSWN Trigger: ATTCCATGAGACCAGAGTCAAGGGGAAATGATGTGA...TATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR-3UTR CAA 90 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTTACCTGAAGACAAACTaGGTTAAATATCAACATCGG | + |
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Preference number: 3 (lower is better) Translates to: LPICIAKCPPPELESIHFYLKTN*VKYQHR Trigger: CCGATGTTGATATTTAACCAAGTTTGTCTTCAGGTA...AAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR TCA 72 bp | ATGATAATGACAGAAAGGGGCCTACTTAGGATGAATTaGTTCGCTGTCACTTATAGGGAGGGAACAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: MIMTERGLLRMN*FAVTYREGTEK Trigger: TTTTTCTGTTCCCTCCCTATAAGTGACAGCGAATCAATTCATCCTAAGTAGGCCCCTTTCTGTCATTATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR GCA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTATGGTCCCTGCTTCAGTaGCAATCCGGGCCCAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RSVLPNAHHQSWKVSILLWSLLQ*QSGPKV Trigger: CACCTTGGGCCCGGATTGGCACTGAAGCAGGGACCA...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR GCA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTATCTGGCTCTGGTCCCTaGTTCAGTGCCAATCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSVLPNAHHQSWKVSILLSGSGP*FSANPG Trigger: GCCCGGATTGGCACTGAAGCAGGGACCAGAGCCAGA...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR CCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGCCCTGGCTCTTGCCCTaGCTCTGGCTCTGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKPWLLP*LWLWSL Trigger: CAGGGACCAGAGCCAGAGCCAGGGCAAGAGCCAGGG...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTAAAAGAGGGAGCCCAGTaGAGATGGCACCTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPNAHHQSWKVSILLKEGAQ*RWHLSP Trigger: AGGGCTCAGGTGCCATCTTCACTGGGCTCCCTCTTT...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTTTTGACTACCATAAAGTCCCCTAACTTAATGTCTTTCTCACATCATCCCTGGCTCTTGCCCTaGCTCTGGCTCTGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAVLTTIKSPNLMSFSHHPWLLP*LWLWSL Trigger: CAGGGACCAGAGCCAGAGCCAGGGCAAGAGCCAGGG...ATGATGTGAGAAAGACATTAAGTTAGGGGACTTTATGGTAGTCAAAACAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGTGGTCCCTGCTTCAGTaGCAATCCGGGCCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKWSLLQ*QSGPKV Trigger: CACCTTGGGCCCGGATTGGCACTGAAGCAGGGACCA...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGTCTGGCTCTGGTCCCTaGTTCAGTGCCAATCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKSGSGP*FSANPG Trigger: GCCCGGATTGGCACTGAAGCAGGGACCAGAGCCAGA...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | AACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTCCCTGGCTCTTGCCCTaGCTCTGGCTCTGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKSQPKPIETTFWVLKGTPWLLP*LWLWSL Trigger: CAGGGACCAGAGCCAGAGCCAGGGCAAGAGCCAGGG...AGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | ATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACAGTGAAGATGGCACCTaGGCCCTGAGCAGTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MPTTRVGKYPFCYTLLDNSEDGT*ALSSSL Trigger: TAGAGAACTGCTCAGGGCTCAGGTGCCATCTTCACT...GTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGAAAGAGGGAGCCCAGTaGAGATGGCACCTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKKEGAQ*RWHLSP Trigger: AGGGCTCAGGTGCCATCTTCACTGGGCTCCCTCTTT...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAATGGTCCCTGCTTCAGTaGCAATCCGGGCCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKWSLLQ*QSGPKV Trigger: CACCTTGGGCCCGGATTGGCACTGAAGCAGGGACCA...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAACAGCCTTATCAGCACCATCCTCTATCATTCTGAAGAGGAAACTTCAACCAGTCATTATACCTaGCCCCAGAACAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPNSLISTILYHSEEETSTSHYT*PQNSPQ Trigger: CTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGT...TGAAGTTTCCTCTTCAGAATGATAGAGGATGGTGCTGATAAGGCTGTTTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTAGTGAAGATGGCACCTaGGCCCTGAGCAGTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPICIAKCPPPELESIHFSEDGT*ALSSSL Trigger: TAGAGAACTGCTCAGGGCTCAGGTGCCATCTTCACT...AAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTTTTGACTACCATAAAGTCCCCTAACTTAATGTCTTTCTCACATCATAAAGAGGGAGCCCAGTaGAGATGGCACCTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAVLTTIKSPNLMSFSHHKEGAQ*RWHLSP Trigger: AGGGCTCAGGTGCCATCTTCACTGGGCTCCCTCTTT...ATGATGTGAGAAAGACATTAAGTTAGGGGACTTTATGGTAGTCAAAACAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | CTCCCAAACAGCCTTATCAGCACCATCCTCTATCATTCTGAAGAGGAAACTTCAGGGTCAATCTGTAAATaGAATAGCAGGCTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPNSLISTILYHSEEETSGSICK*NSRLQP Trigger: GGGCTGGAGCCTGCTATTGCATTTACAGATTGACCC...TGAAGTTTCCTCTTCAGAATGATAGAGGATGGTGCTGATAAGGCTGTTTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTAGTTAAAAATACATTCAAGAAGCCTCCTGCAATGCGTTTCCCATGGTTTTCTGGCTCTGGTCCCTaGTTCAGTGCCAATCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLVKNTFKKPPAMRFPWFSGSGP*FSANPG Trigger: GCCCGGATTGGCACTGAAGCAGGGACCAGAGCCAGA...AAACCATGGGAAACGCATTGCAGGAGGCTTCTTGAATGTATTTTTAACTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTTAACCTGACTTATGGAGTCAGCCACCAAATCCTTTGCCCCCTCTTTGTCTCAGAACCTGAAGTTTaGTTTCTTCATTCCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFNLTYGVSHQILCPLFVSEPEV*FLHSPL Trigger: CAGCGGGGAATGAAGAAACCAAACTTCAGGTTCTGA...GACAAAGAGGGGGCAAAGGATTTGGTGGCTGACTCCATAAGTCAGGTTAAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGACCTTAAGCCTGCGCTaGTTTTCGGCATTCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKTLSLR*FSAFTL Trigger: GAGCGTGAATGCCGAAAATCAGCGCAGGCTTAAGGT...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGAGTGAAGATGGCACCTaGGCCCTGAGCAGTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKSEDGT*ALSSSL Trigger: TAGAGAACTGCTCAGGGCTCAGGTGCCATCTTCACT...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| 3UTR CAA 72 bp | TGTTACTACTGTAAGACAGTGCTGACAAGAGCGGCCTaGCACATAATGCTCTCTGGCCAATTATGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CYYCKTVLTRAA*HIMLSGQLCSS Trigger: AGAACTGCATAATTGGCCAGAGAGCATTATGTGCAAGGCCGCTCTTGTCAGCACTGTCTTACAGTAGTAACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTACCTTAAGCCTGCGCTaGTTTTCGGCATTCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGKYPFCYTLLDNTLCTLSLR*FSAFTL Trigger: GAGCGTGAATGCCGAAAATCAGCGCAGGCTTAAGGT...ACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAACCAGTCATTATACCTaGCCCCAGAACAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKTSHYT*PQNSPQ Trigger: CTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGT...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | AACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTACCTTAAGCCTGCGCTaGTTTTCGGCATTCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKSQPKPIETTFWVLKGTTLSLR*FSAFTL Trigger: GAGCGTGAATGCCGAAAATCAGCGCAGGCTTAAGGT...AGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTAAGGAGCTTCAGAACCTaGAGTTTGGTTTCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPNAHHQSWKVSILLRSFRT*SLVSSF Trigger: GAATGAAGAAACCAAACTTCAGGTTCTGAAGCTCCT...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | ACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTGGGTCAATCTGTAAATaGAATAGCAGGCTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGKYPFCYTLLDNTLCGSICK*NSRLQP Trigger: GGGCTGGAGCCTGCTATTGCATTTACAGATTGACCC...ACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGGGTCAATCTGTAAATaGAATAGCAGGCTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKGSICK*NSRLQP Trigger: GGGCTGGAGCCTGCTATTGCATTTACAGATTGACCC...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| 3UTR CAA 72 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTaGGAAAGTATCCATTTTGCTACACTCTCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LPICIAKCPPPE*ESIHFATLSLI Trigger: TATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| 3UTR CAA 72 bp | AAAAGGTTTACCTCTTTTAAGGCTTACCGATCTGTATaGCCAAATGCCCACCACCAGAGTTGGAAAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: KRFTSFKAYRSV*PNAHHQSWKVS Trigger: GGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAAGCCTTAAAAGAGGTAAACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | GTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTCCCCAATTCAATCGGGAAGTaGCTGTGTCATCACACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VDILYLVNSECRTLKVFPNSIGK*LCHHTL Trigger: AAGTGTGTGATGACACAGTCACTTCCCGATTGAATT...GGGGAACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | TTACCGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTAGGAGCTTCAGAACCTaGAGTTTGGTTTCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPICIAKCPPPELESIHFRSFRT*SLVSSF Trigger: GAATGAAGAAACCAAACTTCAGGTTCTGAAGCTCCT...AAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CAGCGTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTCAAACTTTCCAACCTTaGCTCGCACCTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRRHSLFSQFRMSDTEGVQTFQP*LAPGNH Trigger: ATGATTTCCAGGTGCGAGTCAAGGTTGGAAAGTTTG...AACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGACGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | ATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACATTTTCTCCTTGTTCTaGTTTCTTCCTCGGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: MPTTRVGKYPFCYTLLDNIFSLF*FLPRVN Trigger: ATTGACCCGAGGAAGAAAGCAGAACAAGGAGAAAAT...GTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTTTTGACTACCATAAAGTCCCCTAACTTAATGTCTTTCTCACATCATAATCCGGGCCCAAGGTaGGTACCAAACTATACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAVLTTIKSPNLMSFSHHNPGPR*VPNYTL Trigger: AAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATT...ATGATGTGAGAAAGACATTAAGTTAGGGGACTTTATGGTAGTCAAAACAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAAATCCGGGCCCAAGGTaGGTACCAAACTATACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKNPGPR*VPNYTL Trigger: AAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATT...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTAATCCGGGCCCAAGGTaGGTACCAAACTATACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRVGKYPFCYTLLDNTLCNPGPR*VPNYTL Trigger: AAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATT...ACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGTCAGAACCTGAAGTTTaGTTTCTTCATTCCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKSEPEV*FLHSPL Trigger: CAGCGGGGAATGAAGAAACCAAACTTCAGGTTCTGA...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| 3UTR CAA 72 bp | AAGTATCCATTTTGCTACACTCTCCTTGATAACACATaGTGTGGGGAGGACATTTATACTGAGCCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYPFCYTLLDNT*CGEDIYTEPSS Trigger: AGAACTGGGCTCAGTATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| 3UTR CAA 72 bp | CCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTaGATAACACATTGTGTGGGGAGGACATTTATACTG | + |
|
Preference number: 4 (lower is better) Translates to: PELESIHFATLS*ITHCVGRTFIL Trigger: CAGTATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGAATTCAATCGGGAAGTaGCTGTGTCATCACACACTT | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKNSIGK*LCHHTL Trigger: AAGTGTGTGATGACACAGTCACTTCCCGATTGAATT...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGAGGAGCTTCAGAACCTaGAGTTTGGTTTCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKRSFRT*SLVSSF Trigger: GAATGAAGAAACCAAACTTCAGGTTCTGAAGCTCCT...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGTTGGAAAGTATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTCAAACTTTCCAACCTTaGCTCGCACCTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRVGKYPFCYTLLDNTLCQTFQP*LAPGNH Trigger: ATGATTTCCAGGTGCGAGTCAAGGTTGGAAAGTTTG...ACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGATACTTTCCAACTCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR TCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAACAAACTTTCCAACCTTaGCTCGCACCTGGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKQTFQP*LAPGNH Trigger: ATGATTTCCAGGTGCGAGTCAAGGTTGGAAAGTTTG...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
||
| CDS-3UTR GCA 90 bp | GTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTCCCCTGTATTGAGAATCTTTaGAACAATTGGGAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VDILYLVNSECRTLKVFPCIENL*NNWETT Trigger: GGTGGTCTCCCAATTGTTGCAAAGATTCTCAATACA...GGGGAACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | GTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTCCCCTTCTCTAGTCATGGCTaGATTTTCAGCCAGATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VDILYLVNSECRTLKVFPFSSHG*IFSQIQ Trigger: TTGAATCTGGCTGAAAATCCAGCCATGACTAGAGAA...GGGGAACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
||
| CDS-3UTR CCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGTCCTTTCAGTCAGTTTaGCCACAAACTTTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKSFQSV*PQTFQP Trigger: AGGTTGGAAAGTTTGTGGCCAAACTGACTGAAAGGA...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR TCA 90 bp | CAGTACTTGCCGTTTTCCAAACCTTTCCTGAGAGAACCAACATTCTTTGATAAAAATTCAATCGGGAAGTaGCTGTGTCATCACACACTT | + |
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Preference number: 4 (lower is better) Translates to: QYLPFSKPFLREPTFFDKNSIGK*LCHHTL Trigger: AAGTGTGTGATGACACAGTCACTTCCCGATTGAATT...TTTATCAAAGAATGTTGGTTCTCTCAGGAAAGGTTTGGAAAACGGCAAGTACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR GCA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGTGTATTGAGAATCTTTaGAACAATTGGGAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: QNWQLKGFLCHINNVEKKCIENL*NNWETT Trigger: GGTGGTCTCCCAATTGTTGCAAAGATTCTCAATACA...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTTAAAAATACATTCAAGAAGCCTCCTGCAATGCGTTTCCCATGGTTTTCAGAACCTGAAGTTTaGTTTCTTCATTCCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FLVKNTFKKPPAMRFPWFSEPEV*FLHSPL Trigger: CAGCGGGGAATGAAGAAACCAAACTTCAGGTTCTGA...AAACCATGGGAAACGCATTGCAGGAGGCTTCTTGAATGTATTTTTAACTAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR CCA 90 bp | ATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTGGGGAGGACATTTATATCCTTTCAGTCAGTTTaGCCACAAACTTTCCAACCT | + |
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Preference number: 4 (lower is better) Translates to: IHFATLSLITHCVGRTFISFQSV*PQTFQP Trigger: AGGTTGGAAAGTTTGTGGCCAAACTGACTGAAAGGA...TATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR TCA 90 bp | CAGTACTTGCCGTTTTCCAAACCTTTCCTGAGAGAACCAACATTCTTTGATAAAGTGTCATCACACACTTaGTTCATGTATACCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: QYLPFSKPFLREPTFFDKVSSHT*FMYTLS Trigger: GCTTAAGGTATACATGAATCAAGTGTGTGATGACAC...TTTATCAAAGAATGTTGGTTCTCTCAGGAAAGGTTTGGAAAACGGCAAGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR TCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGTGTCATCACACACTTaGTTCATGTATACCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKVSSHT*FMYTLS Trigger: GCTTAAGGTATACATGAATCAAGTGTGTGATGACAC...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR TCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAATTAGCAAGGATATGCTaGTACTCGTTAGTAACAGTC | + |
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Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKLARIC*YSLVTV Trigger: GACTGTTACTAACGAGTATCAGCATATCCTTGCTAA...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR TCA 90 bp | ATCCATTTTGCTACACTCTCCTTGATAACACATTGTGTGGGGAGGACATTTATATTAGCAAGGATATGCTaGTACTCGTTAGTAACAGTC | + |
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Preference number: 4 (lower is better) Translates to: IHFATLSLITHCVGRTFILARIC*YSLVTV Trigger: GACTGTTACTAACGAGTATCAGCATATCCTTGCTAA...TATAAATGTCCTCCCCACACAATGTGTTATCAAGGAGAGTGTAGCAAAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR GCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAATTTTCTCCTTGTTCTaGTTTCTTCCTCGGGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKIFSLF*FLPRVN Trigger: ATTGACCCGAGGAAGAAAGCAGAACAAGGAGAAAAT...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR GCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAATGTATTGAGAATCTTTaGAACAATTGGGAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKCIENL*NNWETT Trigger: GGTGGTCTCCCAATTGTTGCAAAGATTCTCAATACA...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR CCA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAATTCTCTAGTCATGGCTaGATTTTCAGCCAGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: SKLAAERVPLPYKQRGEKFSSHG*IFSQIQ Trigger: TTGAATCTGGCTGAAAATCCAGCCATGACTAGAGAA...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR CCA 90 bp | CAGTACTTGCCGTTTTCCAAACCTTTCCTGAGAGAACCAACATTCTTTGATAAATTCTCTAGTCATGGCTaGATTTTCAGCCAGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: QYLPFSKPFLREPTFFDKFSSHG*IFSQIQ Trigger: TTGAATCTGGCTGAAAATCCAGCCATGACTAGAGAA...TTTATCAAAGAATGTTGGTTCTCTCAGGAAAGGTTTGGAAAACGGCAAGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR CCA 90 bp | AACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTTCCTTTCAGTCAGTTTaGCCACAAACTTTCCAACCT | + |
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Preference number: 4 (lower is better) Translates to: NKSQPKPIETTFWVLKGTSFQSV*PQTFQP Trigger: AGGTTGGAAAGTTTGTGGCCAAACTGACTGAAAGGA...AGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR CAA 72 bp | TATCATTCTGAAGAGGAAACTTCAAACCACCTGAGTTaGGGCCTAAAGGTTTTCTACTCAGTACACATTCAA | + |
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Preference number: 4 (lower is better) Translates to: YHSEEETSNHLS*GLKVFYSVHIQ Trigger: TTGAATGTGTACTGAGTAGAAAACCTTTAGGCCCAAACTCAGGTGGTTTGAAGTTTCCTCTTCAGAATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| 3UTR CAA 72 bp | GTAACTGCTGCTATATGCCAGAATAATGTAGAGACTTaGCCTAAATTCTCTCATATAAACCTCCCAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: VTAAICQNNVET*PKFSHINLPNS Trigger: GCTGTTTGGGAGGTTTATATGAGAGAATTTAGGCAAAGTCTCTACATTATTCTGGCATATAGCAGCAGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS CCA 90 bp | GGCTCTGGCTCTGGTCCCTGCTTCAGTGCCAATCCGGGCCCAAGGTaGGTACCAAACTATACTCTTGCTCTCGTTACTGTCATCATCATC | + |
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Preference number: 5 (lower is better) Translates to: GSGSGPCFSANPGPR*VPNYTLALVTVIII Trigger: GATGATGATGACAGTAACGAGAGCAAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATTGGCACTGAAGCAGGGACCAGAGCCAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS GCA 90 bp | CTTCAGTGCCAATCCGGGCCCAAGGTGGGTACCAAACTATACTCTTaGTCTCGTTACTGTCATCATCATCATCAGACCAGTCATTATACC | + |
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Preference number: 5 (lower is better) Translates to: LQCQSGPKVGTKLYS*SRYCHHHHQTSHYT Trigger: GGTATAATGACTGGTCTGATGATGATGATGACAGTAACGAGAGCAAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATTGGCACTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS TCA 90 bp | TTGGGAACATCCTTTCAGTCAGTTTGGCCACAAACTTTCCAACCTTaGCTCGCACCTGGAAATCATGACGGCTCTCGATTCCTAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: LGTSFQSVWPQTFQP*LAPGNHDGSRFLEL Trigger: AAGTTCTAGGAATCGAGAGCCGTCATGATTTCCAGGTGCGAGTCAAGGTTGGAAAGTTTGTGGCCAAACTGACTGAAAGGATGTTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR CAA 90 bp | CGATCTGTATTGCCAAATGCCCACCACCAGAGTTGGAAAGTATCCATTTTGCTATTAGTAACAGTCATATaGGTAAGCAATCTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RSVLPNAHHQSWKVSILLLVTVI*VSNLSP Trigger: TGGACTCAGATTGCTTACCAATATGACTGTTACTAA...TAGCAAAATGGATACTTTCCAACTCTGGTGGTGGGCATTTGGCAATACAGATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR CAA 90 bp | CAGCGTCGACATTCTTTATTTAGTCAATTCAGAATGTCGGACACTGAAGGTGTTATGGGATCTCGTGTATaGAGAATCTTTGCAACAATT | + |
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Preference number: 5 (lower is better) Translates to: QRRHSLFSQFRMSDTEGVMGSRV*RIFATI Trigger: AATTGTTGCAAAGATTCTCAATACACGAGATCCCAT...AACACCTTCAGTGTCCGACATTCTGAATTGACTAAATAAAGAATGTCGACGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR CAA 90 bp | CAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAAGATGGGATCTCGTGTATaGAGAATCTTTGCAACAATT | + |
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Preference number: 5 (lower is better) Translates to: QNWQLKGFLCHINNVEKKMGSRV*RIFATI Trigger: AATTGTTGCAAAGATTCTCAATACACGAGATCCCAT...CTTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS-3UTR CAA 90 bp | ACAAAAGTCAACCAAAACCCATCGAAACTACATTCTGGGTACTTAAAGGTACTCATGGGATCTCGTGTATaGAGAATCTTTGCAACAATT | + |
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Preference number: 5 (lower is better) Translates to: TKVNQNPSKLHSGYLKVLMGSRV*RIFATI Trigger: AATTGTTGCAAAGATTCTCAATACACGAGATCCCAT...GAGTACCTTTAAGTACCCAGAATGTAGTTTCGATGGGTTTTGGTTGACTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081834.10 ENSMUST00000086884.5 |
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| CDS-3UTR CAA 90 bp | TCAAAATTGGCAGCTGAAAGGGTTCCTTTGCCATATAAACAACGTGGAGAAAAATTAGTAACAGTCATATaGGTAAGCAATCTGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SKLAAERVPLPYKQRGEKLVTVI*VSNLSP Trigger: TGGACTCAGATTGCTTACCAATATGACTGTTACTAA...TTTTTCTCCACGTTGTTTATATGGCAAAGGAACCCTTTCAGCTGCCAATTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS CCA 72 bp | TCTGGTCCCTGCTTCAGTGCCAATCCGGGCCCAAGGTaGGTACCAAACTATACTCTTGCTCTCGTTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: SGPCFSANPGPR*VPNYTLALVTV Trigger: GACAGTAACGAGAGCAAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATTGGCACTGAAGCAGGGACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS TCA 72 bp | CTCTTTGTACTCCTTCTTATTAAAGAGGGAGCCCAGTaGAGATGGCACCTGAGCCCTGAGCAGTTCTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: LFVLLLIKEGAQ*RWHLSPEQFSS Trigger: ACTAGAGAACTGCTCAGGGCTCAGGTGCCATCTTCACTGGGCTCCCTCTTTAATAAGAAGGAGTACAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS TCA 72 bp | TCCTTTCAGTCAGTTTGGCCACAAACTTTCCAACCTTaGCTCGCACCTGGAAATCATGACGGCTCTCGATTC | + |
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Preference number: 6 (lower is better) Translates to: SFQSVWPQTFQP*LAPGNHDGSRF Trigger: GAATCGAGAGCCGTCATGATTTCCAGGTGCGAGTCAAGGTTGGAAAGTTTGTGGCCAAACTGACTGAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS GCA 72 bp | CAATCCGGGCCCAAGGTGGGTACCAAACTATACTCTTaGTCTCGTTACTGTCATCATCATCATCAGACCAGT | + |
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Preference number: 6 (lower is better) Translates to: QSGPKVGTKLYS*SRYCHHHHQTS Trigger: ACTGGTCTGATGATGATGATGACAGTAACGAGAGCAAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS CCA 72 bp | TACTGTCATCATCATCATCAGACCAGTCATTATACCTaGCCCCAGAACAGTCCCCAGCATCATCCACATCAC | + |
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Preference number: 6 (lower is better) Translates to: YCHHHHQTSHYT*PQNSPQHHPHH Trigger: GTGATGTGGATGATGCTGGGGACTGTTCTGGGGCCAGGTATAATGACTGGTCTGATGATGATGATGACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS CAA 90 bp | GCTTCAGTGCCAATCCGGGCCCAAGGTGGGTACCAAACTATACTCTaGCTCTCGTTACTGTCATCATCATCATCAGACCAGTCATTATAC | + |
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Preference number: 6 (lower is better) Translates to: ASVPIRAQGGYQTIL*LSLLSSSSSDQSLY Trigger: GTATAATGACTGGTCTGATGATGATGATGACAGTAACGAGAGCAAGAGTATAGTTTGGTACCCACCTTGGGCCCGGATTGGCACTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS TCA 72 bp | ACAAACTTTCCAACCTTGACTCGCACCTGGAAATCATaGCGGCTCTCGATTCCTAGAACTTTATCAGCACAC | + |
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Preference number: 6 (lower is better) Translates to: TNFPTLTRTWKS*RLSIPRTLSAH Trigger: GTGTGCTGATAAAGTTCTAGGAATCGAGAGCCGTCATGATTTCCAGGTGCGAGTCAAGGTTGGAAAGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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| CDS GCA 72 bp | TTCCTTAACAATGGGATCTCGTGTATTGAGAATCTTTaGAACAATTGGGAGACCACCCAAATCTCGAATAAT | + |
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Preference number: 6 (lower is better) Translates to: FLNNGISCIENL*NNWETTQISNN Trigger: ATTATTCGAGATTTGGGTGGTCTCCCAATTGTTGCAAAGATTCTCAATACACGAGATCCCATTGTTAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081834.10 ENSMUST00000086880.11 ENSMUST00000086884.5 |
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