Pregenerated sensors for ARMC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032468Ensembl transcript IDs: ENSMUST00000035043.12, ENSMUST00000185524.7, ENSMUST00000186049.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGGAGGGTGTGGGCCCCAGCAGCTGCAGACACCGCACACACTaGCTGCTAAGCCCTGCTGATCACAGGAAGGCAGGCTGTTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: GREGVGPSSCRHRTH*LLSPADHRKAGCLF Trigger: GAACAAACAGCCTGCCTTCCTGTGATCAGCAGGGCTTAGCAGGCAGTGTGTGCGGTGTCTGCAGCTGCTGGGGCCCACACCCTCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR TCA 90 bp | CCCCAGCAGCTGCAGACACCGCACACACTGCCTGCTAAGCCCTGCTaGTCACAGGAAGGCAGGCTGTTTGTTCCTATCTCTGATGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: PQQLQTPHTLPAKPC*SQEGRLFVPISDEF Trigger: GAACTCATCAGAGATAGGAACAAACAGCCTGCCTTCCTGTGATCAGCAGGGCTTAGCAGGCAGTGTGTGCGGTGTCTGCAGCTGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR TCA 90 bp | GGTGATCTGGCTTGTTTCCAGGCAACCTGCTCTCCAGGTTTGCTCTaGGACCCTGCCAGATACTGCCACACTAATGACAGGACGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GDLACFQATCSPGLL*DPARYCHTNDRTLG Trigger: CCCCAACGTCCTGTCATTAGTGTGGCAGTATCTGGCAGGGTCTCAGAGCAAACCTGGAGAGCAGGTTGCCTGGAAACAAGCCAGATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR TCA 90 bp | TTGCAATCAACCATACTTAAGTCTTCCAAGGAAGGCGAAGGCTGGTaGCAGACCAGCTCTCAGGTGAGCAGCCCTGTCGGGTGTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LQSTILKSSKEGEGW*QTSSQVSSPVGCGW Trigger: CCAGCCACACCCGACAGGGCTGCTCACCTGAGAGCTGGTCTGTCACCAGCCTTCGCCTTCCTTGGAAGACTTAAGTATGGTTGATTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR CCA 90 bp | TTCATTCCGGATGAGCACAGCACCCAGCTGTCCCCAGCTACTGCATaGCCTTTGCTGGGGCACTTAAGCAGCTGCCTCTTTCTAGGACAT | + |
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Preference number: 1 (lower is better) Translates to: FIPDEHSTQLSPATA*PLLGHLSSCLFLGH Trigger: ATGTCCTAGAAAGAGGCAGCTGCTTAAGTGCCCCAGCAAAGGCCATGCAGTAGCTGGGGACAGCTGGGTGCTGTGCTCATCCGGAATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR TCA 90 bp | CCAGCCCACCTGGTCCCCGCAAGGCTTCCACTATCAGCCTCCCTTTaGCGTTTCAAAGCCTACAGTGACCATCCCTCACTTTGCTCTATT | + |
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Preference number: 1 (lower is better) Translates to: PAHLVPARLPLSASL*RFKAYSDHPSLCSI Trigger: AATAGAGCAAAGTGAGGGATGGTCACTGTAGGCTTTGAAACGTCAAAGGGAGGCTGATAGTGGAAGCCTTGCGGGGACCAGGTGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR TCA 90 bp | CACAGGAAGGCAGGCTGTTTGTTCCTATCTCTGATGAGTTCAATTTaGAGGGACCGGAAGTTGAAGCAGATTCTACACCCCCGCCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: HRKAGCLFLSLMSSI*RDRKLKQILHPRPH Trigger: ATGGGGGCGGGGGTGTAGAATCTGCTTCAACTTCCGGTCCCTTCAAATTGAACTCATCAGAGATAGGAACAAACAGCCTGCCTTCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR GCA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTaGGTTAAGAACTTGGGTGTAGACATAAGACCACGCCCCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: SGHKGRTECSIRARS*VKNLGVDIRPRPHS Trigger: AGAGTGGGGGCGTGGTCTTATGTCTACACCCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR GCA 90 bp | AGGCAAGATTTATCCACAGAGTTCAAAGGGTCTTCAGCCCTCTCATaGTATTTTGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: RQDLSTEFKGSSALS*YFGFTIVSATCYWF Trigger: AAACCAATAACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACCCTTTGAACTCTGTGGATAAATCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR CCA 90 bp | TACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATaGGGTGAGGTACCAGTGAGACATTTCAGAAGAGCTGGAAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: YNYLHKEHEFSVTLT*GEVPVRHFRRAGKF Trigger: GAACTTTCCAGCTCTTCTGAAATGTCTCACTGGTACCTCACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR TCA 90 bp | TTAATGTCTGCAATCCTCTGTGGACTCCATCAGACTGTAAGTTTTTaGGTAGTAAATTCTAGCCGTTTAGTTTGTTGGGGGAGCCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: LMSAILCGLHQTVSF*VVNSSRLVCWGSQV Trigger: AACCTGGCTCCCCCAACAAACTAAACGGCTAGAATTTACTACTCAAAAACTTACAGTCTGATGGAGTCCACAGAGGATTGCAGACATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR CCA 90 bp | TTTATCCACAGAGTTCAAAGGGTCTTCAGCCCTCTCATGCTATTTTaGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACAG | + |
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Preference number: 1 (lower is better) Translates to: FIHRVQRVFSPLMLF*VHDCLSNVLLVSLQ Trigger: CTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACCCTTTGAACTCTGTGGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR GCA 90 bp | AAATCAGAGAAGTTAATTCGAGTAAAGCACTTCTTATGTGACCATTaGCTATACCCACAGGCAAGATTTATCCACAGAGTTCAAAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: KSEKLIRVKHFLCDH*LYPQARFIHRVQRV Trigger: GACCCTTTGAACTCTGTGGATAAATCTTGCCTGTGGGTATAGGCAATGGTCACATAAGAAGTGCTTTACTCGAATTAACTTCTCTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGGTGGGCCCCAGCAGCTaGAGACACCGCACACACTGC | + |
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Preference number: 2 (lower is better) Translates to: SGHKGRTECSIRARSCVKVGPSS*RHRTHC Trigger: GCAGTGTGTGCGGTGTCTGCAGCTGCTGGGGCCCAC...CTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | GCTTTCGATTCCCCGTCCTGTCAAAGCCAGCCCACCTGGTCCCCGCAAGGCTTCATTCCACCATCCTTCTaGTTTGGAAGCCTGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: AFDSPSCQSQPTWSPQGFIPPSF*FGSLRT Trigger: AGTTCTCAGGCTTCCAAATCAGAAGGATGGTGGAAT...GAAGCCTTGCGGGGACCAGGTGGGCTGGCTTTGACAGGACGGGGAATCGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR CAA 90 bp | GGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTaGGGTGTAGACATAAGACCACGCCCCCACTCTCCCCACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GRTECSIRARSCVKN*GVDIRPRPHSPHFL Trigger: AAGGAAGTGGGGAGAGTGGGGGCGTGGTCTTATGTCTACACCCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGTCTCCAGGTTTGCTCTaGGACCCTGCCAGATACTGC | + |
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Preference number: 2 (lower is better) Translates to: SGHKGRTECSIRARSCVKSPGLL*DPARYC Trigger: GCAGTATCTGGCAGGGTCTCAGAGCAAACCTGGAGA...CTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTTACTGGTACCTGTCGGGTGTGGCTaGTGGGAGGGAGGGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: WVHDCLSNVLLVSLQLLVPVGCG*WEGGCG Trigger: CCCACACCCTCCCTCCCACCAGCCACACCCGACAGG...TACCAGTAACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR CAA 90 bp | TCACAGGAAGGCAGGCTGTTTGTTCCTATCTCTGATGAGTTCAATTaGAAGGGACCGGAAGTTGAAGCAGATTCTACACCCCCGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SQEGRLFVPISDEFN*KGPEVEADSTPPPP Trigger: TGGGGGCGGGGGTGTAGAATCTGCTTCAACTTCCGGTCCCTTCAAATTGAACTCATCAGAGATAGGAACAAACAGCCTGCCTTCCTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACACTATTTCATTCCGGATaGGCACAGCACCCAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: TLPTSLLTKYCTCIKQHTLFHSG*AQHPAV Trigger: GACAGCTGGGTGCTGTGCTCATCCGGAATGAAATAG...TGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | TCCTACTCCCATGATGGAGAGTCCATCTCTCTAACTCCTGTTAGGCTACGGCATGGGGTGAGGTACCAGTaGGACATTTCAGAAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SYSHDGESISLTPVRLRHGVRYQ*DISEEL Trigger: CAGCTCTTCTGAAATGTCTCACTGGTACCTCACCCC...ATGCCGTAGCCTAACAGGAGTTAGAGAGATGGACTCTCCATCATGGGAGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACTCTTGGGTGGCCATATaGAGAGCAGGAAGCATTGCA | + |
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Preference number: 2 (lower is better) Translates to: HSPHFLADQILHLHKAAHSWVAI*RAGSIA Trigger: TGCAATGCTTCCTGCTCTCCATATGGCCACCCAAGA...GTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTTACTGGTAAGACCAGCTCTCAGGTaGGCAGCCCTGTCGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: WVHDCLSNVLLVSLQLLVRPALR*AALSGV Trigger: CACACCCGACAGGGCTGCTCACCTGAGAGCTGGTCT...TACCAGTAACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTTACTACAGCAACTCATaGCAGGACATGTGGATCGGC | + |
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Preference number: 2 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVYYSNS*QDMWIG Trigger: GCCGATCCACATGTCCTGTCATGAGTTGCTGTAGTA...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAGCTGTCCCCAGCTACTaGATGGCCTTTGCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LADQILHLHKAAHSFVLIAVPSY*MAFAGA Trigger: TGCCCCAGCAAAGGCCATGCAGTAGCTGGGGACAGC...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACCAGCTGAGATACATGGAAAACTCAGCTTGTTGTTGGCTGTGCATTTTGGGGTGAGGTACCAGTaGGACATTTCAGAAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSPAEIHGKLSLLLAVHFGVRYQ*DISEEL Trigger: CAGCTCTTCTGAAATGTCTCACTGGTACCTCACCCC...AAAATGCACAGCCAACAACAAGCTGAGTTTTCCATGTATCTCAGCTGGTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGTGTTTGTATCTTGGGTaGCCATATGGAGAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGHKGRTECSIRARSCVKCLYLG*PYGEQE Trigger: TTCCTGCTCTCCATATGGCCACCCAAGATACAAACA...CTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGTCTGTGTTTGTATCTTaGGTGGCCATATGGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SGHKGRTECSIRARSCVKSVFVS*VAIWRA Trigger: TGCTCTCCATATGGCCACCCAAGATACAAACACAGA...CTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTAAACCTCTCACCAGCTaGGATACATGGAAAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVKPLTS*DTWKTQ Trigger: CTGAGTTTTCCATGTATCTCAGCTGGTGAGAGGTTT...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCACCAGCTGAGATACATGGAAAACTCAGCTTGTTGTTGGCTGTGCATTTTCGGCTGGTTAATGTCTaGAATCCTCTGTGGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSPAEIHGKLSLLLAVHFRLVNV*NPLWTP Trigger: TGGAGTCCACAGAGGATTGCAGACATTAACCAGCCG...AAAATGCACAGCCAACAACAAGCTGAGTTTTCCATGTATCTCAGCTGGTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTAGCCGTTTAGTTTGTTaGGGGAGCCAGGTTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVSRLVC*GSQVRI Trigger: AATTCTAACCTGGCTCCCCCAACAAACTAAACGGCT...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGCTCACATTAGCACTCTaGCGTCTGTACAAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: TKGEQNAVLGPEAALRTWLTLAL*RLYKTQ Trigger: TTGGGTTTTGTACAGACGTCAGAGTGCTAATGTGAG...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACCAGCTGAGATACATGGAAAACTCAGCTTGTTGTTGGCTGTGCATTTTGTCTGCAATCCTCTGTaGACTCCATCAGACTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LSPAEIHGKLSLLLAVHFVCNPL*TPSDCK Trigger: CTTACAGTCTGATGGAGTCCACAGAGGATTGCAGAC...AAAATGCACAGCCAACAACAAGCTGAGTTTTCCATGTATCTCAGCTGGTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTACTCCCATGATGGAGAGTCCATCTCTCTAACTCCTGTTAGGCTACGGCATCCTAAAATTCTTCTCTaGGTCATGGTAATTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SYSHDGESISLTPVRLRHPKILL*VMVISL Trigger: GAGAGAAATTACCATGACTCAGAGAAGAATTTTAGG...ATGCCGTAGCCTAACAGGAGTTAGAGAGATGGACTCTCCATCATGGGAGTAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR CAA 90 bp | TTTGTTGGGGGAGCCAGGTTAGAATTTAACACTACACTGCACTTCTaGCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: FVGGARLEFNTTLHF*PTTTSIKNMSSVSH Trigger: GTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGCAAGAAGTGCAGTGTAGTGTTAAATTCTAACCTGGCTCCCCCAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATACAAAGAAGTACAAACGAGCATCCTACTCCCATGATGGAGAGTCCATCTCACACTAACATGGGGTaGGGTACCAGTGAGACATTT | + |
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Preference number: 2 (lower is better) Translates to: KIQRSTNEHPTPMMESPSHTNMG*GTSETF Trigger: AAATGTCTCACTGGTACCTCACCCCATGTTAGTGTG...AGATGGACTCTCCATCATGGGAGTAGGATGCTCGTTTGTACTTCTTTGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTCCTAAAATTCTTCTCTaGGTCATGGTAATTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVPKILL*VMVISL Trigger: GAGAGAAATTACCATGACTCAGAGAAGAATTTTAGG...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTTACTGGTAGGGCACTTAAGCAGCTaGCTCTTTCTAGGACATGTT | + |
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Preference number: 2 (lower is better) Translates to: WVHDCLSNVLLVSLQLLVGHLSS*LFLGHV Trigger: AACATGTCCTAGAAAGAGGCAGCTGCTTAAGTGCCC...TACCAGTAACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTCCTTTGGTTTCTTCAAGAATGAATCCTTCTCAATGTGCCTCATCCAACAGCCGTTTAGTTTGTTaGGGGAGCCAGGTTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: AVPLVSSRMNPSQCASSNSRLVC*GSQVRI Trigger: AATTCTAACCTGGCTCCCCCAACAAACTAAACGGCT...GTTGGATGAGGCACATTGAGAAGGATTCATTCTTGAAGAAACCAAAGGAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATACAAAGAAGTACAAACGAGCATCCTACTCCCATGATGGAGAGTCCATCTGTCTGCAATCCTCTGTaGACTCCATCAGACTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: KIQRSTNEHPTPMMESPSVCNPL*TPSDCK Trigger: CTTACAGTCTGATGGAGTCCACAGAGGATTGCAGAC...AGATGGACTCTCCATCATGGGAGTAGGATGCTCGTTTGTACTTCTTTGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR CAA 90 bp | AGTTCAAAGGGTCTTCAGCCCTCTCATGCTATTTTGGGTTCACGATaGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTTACTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: SSKGLQPSHAILGSR*SQQRVIGFFTVTGT Trigger: AGTACCAGTAACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACCCTTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR CCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTAAATACCAATACAGATaGAGAGAGTCAGTCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVKYQYR*RESVNH Trigger: ATGATTGACTGACTCTCTCCATCTGTATTGGTATTT...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR CAA 90 bp | ATTTATCCACAGAGTTCAAAGGGTCTTCAGCCCTCTCATGCTATTTaGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: IYPQSSKGLQPSHAI*GSRLSQQRVIGFFT Trigger: TGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACCCTTTGAACTCTGTGGATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | GACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAATACATTTCAAAGCCTACAGTaGCCATCCCTCACTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: DQILHLHKAAHSFVLINTFQSLQ*PSLTLL Trigger: GAGCAAAGTGAGGGATGGTCACTGTAGGCTTTGAAA...TGTATTTATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAACCCAAGTTCTGTTGTaGCAGCTTTTAAAGTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LADQILHLHKAAHSFVLITQVLL*QLLKSV Trigger: CACTGACTTTAAAAGCTGTCACAACAGAACTTGGGT...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR-3UTR CCA 90 bp | TCATCCAACATACTTGAGGTTGGTTCCTTCATTTCTCTAACAAGCCTAAAATTCGACATGTGGATCGGCTaGTTAATGTCTGCAATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SSNILEVGSFISLTSLKFDMWIG*LMSAIL Trigger: GAGGATTGCAGACATTAACCAGCCGATCCACATGTC...GAATTTTAGGCTTGTTAGAGAAATGAAGGAACCAACCTCAAGTATGTTGGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATACACACTAACATGGGGTaGGGTACCAGTGAGACATTT | + |
|
Preference number: 2 (lower is better) Translates to: LLKIPIQMERVSQSSCSIHTNMG*GTSETF Trigger: AAATGTCTCACTGGTACCTCACCCCATGTTAGTGTG...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR GCA 90 bp | GACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAATACACTAAGCTTACTAAACTaGTTCGCAAAACAGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: DQILHLHKAAHSFVLINTLSLLN*FAKQLP Trigger: AGGGAGCTGTTTTGCGAAGCAGTTTAGTAAGCTTAG...TGTATTTATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR-3UTR GCA 90 bp | GACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAATACATCTTCAGCCCTCTCATaGTATTTTGGGTTCACGATT | + |
|
Preference number: 2 (lower is better) Translates to: DQILHLHKAAHSFVLINTSSALS*YFGFTI Trigger: AATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGA...TGTATTTATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTGTCTCTTGTGATACACCACATGTCTAAAGTGAACAAAATATTTCAGTGTTGTATCATTCCAGCATaGCCATGCCACTCTATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TLSLVIHHMSKVNKIFQCCIIPA*PCHSMF Trigger: GAACATAGAGTGGCATGGCCATGCTGGAATGATACA...ACACTGAAATATTTTGTTCACTTTAGACATGTGGTGTATCACAAGAGACAACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTTCCTTTGGTTTCTTCAAGAATGAATCCTTCTCAATGTGCCTCATCCAACAAATACCAATACAGATaGAGAGAGTCAGTCAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: AVPLVSSRMNPSQCASSNKYQYR*RESVNH Trigger: ATGATTGACTGACTCTCTCCATCTGTATTGGTATTT...GTTGGATGAGGCACATTGAGAAGGATTCATTCTTGAAGAAACCAAAGGAACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATCCAACATACTTGAGGTTGGTTCCTTCATTTCTCTAACAAGCCTAAAATTCACATTTCAGAAGAGCTaGAAAGTTCAGATGACCACT | + |
|
Preference number: 2 (lower is better) Translates to: SSNILEVGSFISLTSLKFTFQKS*KVQMTT Trigger: AGTGGTCATCTGAACTTTCCAGCTCTTCTGAAATGT...GAATTTTAGGCTTGTTAGAGAAATGAAGGAACCAACCTCAAGTATGTTGGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAACATTTCAGAAGAGCTaGAAAGTTCAGATGACCACT | + |
|
Preference number: 2 (lower is better) Translates to: LLKIPIQMERVSQSSCSITFQKS*KVQMTT Trigger: AGTGGTCATCTGAACTTTCCAGCTCTTCTGAAATGT...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAAATTTAACACTACACTaGACTTCTTGCCTACAACTA | + |
|
Preference number: 2 (lower is better) Translates to: LLKIPIQMERVSQSSCSINLTLH*TSCLQL Trigger: TAGTTGTAGGCAAGAAGTGCAGTGTAGTGTTAAATT...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR GCA 90 bp | ACGTTGTCTCTTGTGATACACCACATGTCTAAAGTGAACAAAATATTTCAGTGTCACATCTCTAATGTTTaGTTTGAAGTAACAGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: TLSLVIHHMSKVNKIFQCHISNV*FEVTVH Trigger: GTGAACTGTTACTTCAAAGCAAACATTAGAGATGTG...ACACTGAAATATTTTGTTCACTTTAGACATGTGGTGTATCACAAGAGACAACGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR GCA 72 bp | GGTGTGGGCCCCAGCAGCTGCAGACACCGCACACACTaGCTGCTAAGCCCTGCTGATCACAGGAAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVGPSSCRHRTH*LLSPADHRKAG Trigger: GCCTGCCTTCCTGTGATCAGCAGGGCTTAGCAGGCAGTGTGTGCGGTGTCTGCAGCTGCTGGGGCCCACACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR CCA 72 bp | ACCCTGCCAGATACTGCCACACTAATGACAGGACGTTaGGGTGCTGGGAAGCTTTCGATTCCCCGTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLPDTATLMTGR*GAGKLSIPRPV Trigger: GACAGGACGGGGAATCGAAAGCTTCCCAGCACCCCAACGTCCTGTCATTAGTGTGGCAGTATCTGGCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR TCA 72 bp | GCTTGTTTCCAGGCAACCTGCTCTCCAGGTTTGCTCTaGGACCCTGCCAGATACTGCCACACTAATGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ACFQATCSPGLL*DPARYCHTNDR Trigger: CCTGTCATTAGTGTGGCAGTATCTGGCAGGGTCTCAGAGCAAACCTGGAGAGCAGGTTGCCTGGAAACAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR CCA 72 bp | AGATACTGCCACACTAATGACAGGACGTTGGGGTGCTaGGAAGCTTTCGATTCCCCGTCCTGTCAAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RYCHTNDRTLGC*EAFDSPSCQSQ Trigger: CTGGCTTTGACAGGACGGGGAATCGAAAGCTTCCCAGCACCCCAACGTCCTGTCATTAGTGTGGCAGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR TCA 72 bp | TTCATCCAGGAAAAAGACTTCCTATTTCATTCCGGATaGGCACAGCACCCAGCTGTCCCCAGCTACTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: FIQEKDFLFHSG*AQHPAVPSYCM Trigger: CATGCAGTAGCTGGGGACAGCTGGGTGCTGTGCTCATCCGGAATGAAATAGGAAGTCTTTTTCCTGGATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR-3UTR CAA 90 bp | CACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACTGGAAATCTCTGTGTTaGTATCTTGGGTGGCCATAT | + |
|
Preference number: 3 (lower is better) Translates to: HSPHFLADQILHLHKAAHWKSLC*YLGWPY Trigger: ATATGGCCACCCAAGATACAAACACAGAGATTTCCA...GTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR TCA 72 bp | ACTATCAGCCTCCCTTTGACGTTTCAAAGCCTACAGTaGCCATCCCTCACTTTGCTCTATTCCACCATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TISLPLTFQSLQ*PSLTLLYSTIL Trigger: AAGGATGGTGGAATAGAGCAAAGTGAGGGATGGTCACTGTAGGCTTTGAAACGTCAAAGGGAGGCTGATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR GCA 72 bp | AAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTaGGTTAAGAACTTGGGTGTAGACATAAGACCACGC | + |
|
Preference number: 3 (lower is better) Translates to: KGRTECSIRARS*VKNLGVDIRPR Trigger: GCGTGGTCTTATGTCTACACCCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCTACTCCCATGATGGAGAGTCCATCTCTCTAACTCCTGTTAGGCTACGGCATGGAAAACTCAGCTTGTaGTTGGCTGTGCATTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYSHDGESISLTPVRLRHGKLSL*LAVHFK Trigger: TTTAAAATGCACAGCCAACAACAAGCTGAGTTTTCC...ATGCCGTAGCCTAACAGGAGTTAGAGAGATGGACTCTCCATCATGGGAGTAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR GCA 72 bp | TTATCCACAGAGTTCAAAGGGTCTTCAGCCCTCTCATaGTATTTTGGGTTCACGATTGTCTCAGCAACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSTEFKGSSALS*YFGFTIVSATC Trigger: ACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACCCTTTGAACTCTGTGGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR CCA 72 bp | CTCCATAAAGAACATGAGTTCAGTGTCACACTAACATaGGGTGAGGTACCAGTGAGACATTTCAGAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LHKEHEFSVTLT*GEVPVRHFRRA Trigger: AGCTCTTCTGAAATGTCTCACTGGTACCTCACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR TCA 72 bp | GCAATCCTCTGTGGACTCCATCAGACTGTAAGTTTTTaGGTAGTAAATTCTAGCCGTTTAGTTTGTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AILCGLHQTVSF*VVNSSRLVCWG Trigger: CCCCCAACAAACTAAACGGCTAGAATTTACTACTCAAAAACTTACAGTCTGATGGAGTCCACAGAGGATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR TCA 72 bp | AAAAACACTCTAAGAGGTCAGAAACCTCTCACCAGCTaGGATACATGGAAAACTCAGCTTGTTGTTGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KNTLRGQKPLTS*DTWKTQLVVGC Trigger: ACAGCCAACAACAAGCTGAGTTTTCCATGTATCTCAGCTGGTGAGAGGTTTCTGACCTCTTAGAGTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATACTCAGCAACGTGTTATaGGTTTCTTTACAGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LADQILHLHKAAHSFVLILSNVL*VSLQLL Trigger: CAGTAACTGTAAAGAAACCAATAACACGTTGCTGAG...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR TCA 72 bp | ATGTTCAATAGAAAAACATGTTACTACAGCAACTCATaGCAGGACATGTGGATCGGCTGGTTAATGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: MFNRKTCYYSNS*QDMWIGWLMSA Trigger: TGCAGACATTAACCAGCCGATCCACATGTCCTGTCATGAGTTGCTGTAGTAACATGTTTTTCTATTGAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR TCA 72 bp | AATGAATCCTTCTCAATGTGCCTCATCCAACATACTTaGGGTTGGTTCCTTCATTTCTCTAACAAGCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NESFSMCLIQHT*GWFLHFSNKPK Trigger: TTTAGGCTTGTTAGAGAAATGAAGGAACCAACCTCAAGTATGTTGGATGAGGCACATTGAGAAGGATTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR GCA 72 bp | AAGTTAATTCGAGTAAAGCACTTCTTATGTGACCATTaGCTATACCCACAGGCAAGATTTATCCACAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KLIRVKHFLCDH*LYPQARFIHRV Trigger: AACTCTGTGGATAAATCTTGCCTGTGGGTATAGGCAATGGTCACATAAGAAGTGCTTTACTCGAATTAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTGTCTCTTGTGATACACCACATGTCTAAAGTGAACAAAATATTTCAGTGTAAACTCAGCTTGTTGTaGGCTGTGCATTTTAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: TLSLVIHHMSKVNKIFQCKLSLL*AVHFKL Trigger: CAGTTTAAAATGCACAGCCAACAACAAGCTGAGTTT...ACACTGAAATATTTTGTTCACTTTAGACATGTGGTGTATCACAAGAGACAACGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTCGATTCCCCGTCCTGTCAAAGCCAGCCCACCTGGTCCCCGCAAGGCTTCACAGGGTCTGCTCTTTaGCTTCAATGCTATGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFDSPSCQSQPTWSPQGFTGSAL*LQCYAP Trigger: GGGAGCATAGCATTGAAGTCAAAGAGCAGACCCTGT...GAAGCCTTGCGGGGACCAGGTGGGCTGGCTTTGACAGGACGGGGAATCGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | TCCTACTCCCATGATGGAGAGTCCATCTCTCTAACTCCTGTTAGGCTACGGCATGCTGGCTGTCAGGACTaGGGGACGCCCCTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYSHDGESISLTPVRLRHAGCQD*GTPLSQ Trigger: CTGGGAGAGGGGCGTCCCCCAGTCCTGACAGCCAGC...ATGCCGTAGCCTAACAGGAGTTAGAGAGATGGACTCTCCATCATGGGAGTAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | CACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACGAGAGGCATAGAGCTTaGACGCAGCCTGGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPHFLADQILHLHKAAHERHRA*TQPGGA Trigger: AGCTCCGCCAGGCTGCGTTCAAGCTCTATGCCTCTC...GTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | GCTTTCGATTCCCCGTCCTGTCAAAGCCAGCCCACCTGGTCCCCGCAAGGCTTCAGTCTAGTAGAGACTTaGCATTGTTTTCTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFDSPSCQSQPTWSPQGFSLVET*HCFLCP Trigger: TGGGCACAGAAAACAATGTCAAGTCTCTACTAGACT...GAAGCCTTGCGGGGACCAGGTGGGCTGGCTTTGACAGGACGGGGAATCGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTACGTCACTCCCTGCCTaGTGGCTGTCAGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVTSLPA*WLSGLG Trigger: CCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGACGT...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTGAGAGGCATAGAGCTTaGACGCAGCCTGGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVERHRA*TQPGGA Trigger: AGCTCCGCCAGGCTGCGTTCAAGCTCTATGCCTCTC...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTGGGACCTGCTCAGCAGTaGCATGAGGTGTGGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLRYPSPTRSFILTPVHVGPAQQ*HEVWYH Trigger: GTGATACCACACCTCATGGCACTGCTGAGCAGGTCC...CACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| 3UTR CAA 72 bp | GAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTaGGGTGTAGACATAAGACCACGCCCCCACTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ECSIRARSCVKN*GVDIRPRPHSP Trigger: GGGAGAGTGGGGGCGTGGTCTTATGTCTACACCCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | CACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACGGAGGCAAGCTTCAATaGACTTCAGGTCTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HSPHFLADQILHLHKAAHGGKLQ*TSGLGT Trigger: TGTCCCCAGACCTGAAGTTCATTGAAGCTTGCCTCC...GTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTACGTCACTCCCTGCCTaGTGGCTGTCAGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGTSLPA*WLSGLG Trigger: CCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGACGT...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | GGCTACGGCATGGTCTTTGGGAGCTGTAAGGATATAGAAGATACTCCTCCTGTTAGCTTGAACGCAGCCTaGCGGAGCTCATGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GYGMVFGSCKDIEDTPPVSLNAA*RSSWAC Trigger: ACATGCCCATGAGCTCCGCCAGGCTGCGTTCAAGCT...AACAGGAGGAGTATCTTCTATATCCTTACAGCTCCCAAAGACCATGCCGTAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTTCACTCCCTGCCTGCTaGCTGTCAGGACTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGSLPAC*LSGLGD Trigger: GTCCCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGA...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | AAATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTCTGAGCTGGGATACTTaGAATAGTCAGCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KSEVSLTHTVIHPDSCACLSWDT*NSQPAW Trigger: CCATGCTGGCTGACTATTTCAAGTATCCCAGCTCAG...ACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTGTGCAAACATCTaGCAGCAGCTAACCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SGHKGRTECSIRARSCVKNCANI*QQLTAP Trigger: AGGTGCGGTTAGCTGCTGTCAGATGTTTGCACAGTT...CTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTGTTGACGTCACTCCCTaGCTGCTGGCTGTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGVDVTP*LLAVRT Trigger: AGTCCTGACAGCCAGCAGGCAGGGAGTGACGTCAAC...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | AATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTGCCCTTTGCAACAGTGTaGGAAGATCTGGCAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: NLRYPSPTRSFILTPVHVPFATV*EDLADI Trigger: TATATCTGCCAGATCTTCTCACACTGTTGCAAAGGG...CACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | CAGGACATGTGGATCGGCTGGTTAATGTCTGCAATCCTCTGTGGACTCCATCAGTTTGCTGACGTGAGCTaGATCTCAATAGGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QDMWIGWLMSAILCGLHQFADVS*ISIGLS Trigger: GGATAAGCCTATTGAGATGCAGCTCACGTCAGCAAA...CTGATGGAGTCCACAGAGGATTGCAGACATTAACCAGCCGATCCACATGTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTTCCTTTGGTTTCTTCAAGAATGAATCCTTCTCAATGTGCCTCATCCAACGTTGACGTCACTCCCTaGCTGCTGGCTGTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AVPLVSSRMNPSQCASSNVDVTP*LLAVRT Trigger: AGTCCTGACAGCCAGCAGGCAGGGAGTGACGTCAAC...GTTGGATGAGGCACATTGAGAAGGATTCATTCTTGAAGAAACCAAAGGAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACACAGTGTGAGAAGATCTaGCAGATATACTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSLLTKYCTCIKQHTQCEKI*QIYSWV Trigger: CACCCAGGAGTATATCTGCCAGATCTTCTCACACTG...TGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTGGAGGCAAGCTTCAATaGACTTCAGGTCTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGGGKLQ*TSGLGT Trigger: TGTCCCCAGACCTGAAGTTCATTGAAGCTTGCCTCC...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTTCCTTTGGTTTCTTCAAGAATGAATCCTTCTCAATGTGCCTCATCCAACGGACCTGCTCAGCAGTaGCATGAGGTGTGGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVPLVSSRMNPSQCASSNGPAQQ*HEVWYH Trigger: GTGATACCACACCTCATGGCACTGCTGAGCAGGTCC...GTTGGATGAGGCACATTGAGAAGGATTCATTCTTGAAGAAACCAAAGGAACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | CAGGACATGTGGATCGGCTGGTTAATGTCTGCAATCCTCTGTGGACTCCATCAGGTAACCTCTCCTTACTaGACATTCGAACCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDMWIGWLMSAILCGLHQVTSPY*TFEPNK Trigger: CTTGTTTGGTTCGAATGTGCAGTAAGGAGAGGTTAC...CTGATGGAGTCCACAGAGGATTGCAGACATTAACCAGCCGATCCACATGTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | AATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTGAAGGCAGGGATAATATaGCAGTCTAGTAGAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLRYPSPTRSFILTPVHVKAGII*QSSRDL Trigger: CAAGTCTCTACTAGACTGCCATATTATCCCTGCCTT...CACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | CAGGACATGTGGATCGGCTGGTTAATGTCTGCAATCCTCTGTGGACTCCATCAGAAGGCAGGGATAATATaGCAGTCTAGTAGAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDMWIGWLMSAILCGLHQKAGII*QSSRDL Trigger: CAAGTCTCTACTAGACTGCCATATTATCCCTGCCTT...CTGATGGAGTCCACAGAGGATTGCAGACATTAACCAGCCGATCCACATGTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | CACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGGGTCATCGATACTTaGGGATTCTCAAAGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSPHFLADQILHLHKAAHRVIDT*GFSKAK Trigger: TTTAGCCTTTGAGAATCCCCAAGTATCGATGACCCT...GTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAGCTTGAACGCAGCCTaGCGGAGCTCATGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LADQILHLHKAAHSFVLISLNAA*RSSWAC Trigger: ACATGCCCATGAGCTCCGCCAGGCTGCGTTCAAGCT...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | AATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTGTTTCAGCTCTGTACTTaGGGTTTCTTGTTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLRYPSPTRSFILTPVHVFQLCT*GFLLKQ Trigger: TTGCTTCAACAAGAAACCTCAAGTACAGAGCTGAAA...CACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | TTAATGACAAAATCAGCAGGCCAGTTATGTATCATTCCAGCATGGCCATGCCACCTGAGCTGGGATACTTaGAATAGTCAGCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LMTKSAGQLCIIPAWPCHLSWDT*NSQPAW Trigger: CCATGCTGGCTGACTATTTCAAGTATCCCAGCTCAG...GTGGCATGGCCATGCTGGAATGATACATAACTGGCCTGCTGATTTTGTCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTCTGAGCTGGGATACTTaGAATAGTCAGCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGLSWDT*NSQPAW Trigger: CCATGCTGGCTGACTATTTCAAGTATCCCAGCTCAG...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | AAATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTATGATTTTATCTATATaGGGCCGAGTGGAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSEVSLTHTVIHPDSCACMILSI*GRVERR Trigger: TCTCCTCTCCACTCGGCCTCATATAGATAAAATCAT...ACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| CDS-3UTR CCA 90 bp | GTCAGTCAATCATCATGTTCAATAGAAAAACATGTTACTACAGCAACTCATGACTCACTCCCTGCCTGCTaGCTGTCAGGACTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSQSSCSIEKHVTTATHDSLPAC*LSGLGD Trigger: GTCCCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGA...GTCATGAGTTGCTGTAGTAACATGTTTTTCTATTGAACATGATGATTGACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR CAA 72 bp | GGCAGGCTGTTTGTTCCTATCTCTGATGAGTTCAATTaGAAGGGACCGGAAGTTGAAGCAGATTCTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLFVPISDEFN*KGPEVEADSTP Trigger: GGGTGTAGAATCTGCTTCAACTTCCGGTCCCTTCAAATTGAACTCATCAGAGATAGGAACAAACAGCCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | CAGGACATGTGGATCGGCTGGTTAATGTCTGCAATCCTCTGTGGACTCCATCAGCATTTTTCATGTCTATaGCACCTTGGAGAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDMWIGWLMSAILCGLHQHFSCL*HLGELS Trigger: AGAAAGTTCTCCAAGGTGTCATAGACATGAAAAATG...CTGATGGAGTCCACAGAGGATTGCAGACATTAACCAGCCGATCCACATGTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185524.7 |
||
| CDS-3UTR TCA 90 bp | TCCTACTCCCATGATGGAGAGTCCATCTCTCTAACTCCTGTTAGGCTACGGCATTTTCAGCTCTGTACTTaGGGTTTCTTGTTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYSHDGESISLTPVRLRHFQLCT*GFLLKQ Trigger: TTGCTTCAACAAGAAACCTCAAGTACAGAGCTGAAA...ATGCCGTAGCCTAACAGGAGTTAGAGAGATGGACTCTCCATCATGGGAGTAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | AAAATACAAAGAAGTACAAACGAGCATCCTACTCCCATGATGGAGAGTCCATCTGGAGGCAAGCTTCAATaGACTTCAGGTCTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KIQRSTNEHPTPMMESPSGGKLQ*TSGLGT Trigger: TGTCCCCAGACCTGAAGTTCATTGAAGCTTGCCTCC...AGATGGACTCTCCATCATGGGAGTAGGATGCTCGTTTGTACTTCTTTGTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAGAGAGGCATAGAGCTTaGACGCAGCCTGGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKIPIQMERVSQSSCSIERHRA*TQPGGA Trigger: AGCTCCGCCAGGCTGCGTTCAAGCTCTATGCCTCTC...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGGATGATCTGGCCCTTTaGAACAGTGTGAGAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TKGEQNAVLGPEAALRTWDDLAL*NSVRRS Trigger: AGATCTTCTCACACTGTTGCAAAGGGCCAGATCATC...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | GCTAATATTGATGGCAGTAAGATGCTAGCTTACCATCTGCACAGCACCATGTACAGCATGGCAATGAGGTaGTCGGTTATGCTAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: ANIDGSKMLAYHLHSTMYSMAMR*SVMLAI Trigger: AATCGCTAGCATAACCGACCACCTCATTGCCATGCT...GTACATGGTGCTGTGCAGATGGTAAGCTAGCATCTTACTGCCATCAATATTAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTAGCATGGCAATGAGGTaGTCGGTTATGCTAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGSMAMR*SVMLAI Trigger: AATCGCTAGCATAACCGACCACCTCATTGCCATGCT...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| 3UTR CAA 72 bp | CAGAGTTCAAAGGGTCTTCAGCCCTCTCATGCTATTTaGGGTTCACGATTGTCTCAGCAACGTGTTATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSKGLQPSHAI*GSRLSQQRVIG Trigger: ACCAATAACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACCCTTTGAACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | GAGTCAAATGAGGCTAGCTCCTGTACTTCCTTTTACAAAGGTGTGGGGTGCTCGCATTTTTCATGTCTATaGCACCTTGGAGAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESNEASSCTSFYKGVGCSHFSCL*HLGELS Trigger: AGAAAGTTCTCCAAGGTGTCATAGACATGAAAAATG...CGAGCACCCCACACCTTTGTAAAAGGAAGTACAGGAGCTAGCCTCATTTGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | CTCTCACCAGCTGAGATACATGGAAAACTCAGCTTGTTGTTGGCTGTGCATTTTCCCTTTGCAACAGTGTaGGAAGATCTGGCAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: LSPAEIHGKLSLLLAVHFPFATV*EDLADI Trigger: TATATCTGCCAGATCTTCTCACACTGTTGCAAAGGG...AAAATGCACAGCCAACAACAAGCTGAGTTTTCCATGTATCTCAGCTGGTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTGATGATCTGGCCCTTTaGAACAGTGTGAGAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGDDLAL*NSVRRS Trigger: AGATCTTCTCACACTGTTGCAAAGGGCCAGATCATC...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGGTAACCTCTCCTTACTaGACATTCGAACCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKGEQNAVLGPEAALRTWVTSPY*TFEPNK Trigger: CTTGTTTGGTTCGAATGTGCAGTAAGGAGAGGTTAC...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGTTGACTTCAATGCTATaGTCCCCTTCCAGTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKGEQNAVLGPEAALRTWLTSML*SPSSIR Trigger: TCTGATACTGGAAGGGGAGCATAGCATTGAAGTCAA...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | ACGTTGTCTCTTGTGATACACCACATGTCTAAAGTGAACAAAATATTTCAGTGTAGCTTGAACGCAGCCTaGCGGAGCTCATGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLVIHHMSKVNKIFQCSLNAA*RSSWAC Trigger: ACATGCCCATGAGCTCCGCCAGGCTGCGTTCAAGCT...ACACTGAAATATTTTGTTCACTTTAGACATGTGGTGTATCACAAGAGACAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
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| CDS-3UTR CCA 90 bp | GCTAATATTGATGGCAGTAAGATGCTAGCTTACCATCTGCACAGCACCATGTACCATGATCCTGGAAACTaGTTCGAAGCTGTTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ANIDGSKMLAYHLHSTMYHDPGN*FEAVVQ Trigger: CTGTACAACAGCTTCGAACCAGTTTCCAGGATCATG...GTACATGGTGCTGTGCAGATGGTAAGCTAGCATCTTACTGCCATCAATATTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
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| CDS-3UTR CCA 90 bp | ACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGAAGGTTACATAACATaGAAGATGCTACTACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLPTSLLTKYCTCIKQHTEGYIT*KMLLLG Trigger: TCCTAGTAGTAGCATCTTCCATGTTATGTAACCTTC...TGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | GACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAATACAGGTGAGGTTAGGAGATaGGCAATGTTCTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DQILHLHKAAHSFVLINTGEVRR*AMFCTA Trigger: GGCAGTGCAGAACATTGCTCATCTCCTAACCTCACC...TGTATTTATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | ACACTCCATGTCATCATCGATTTTGTCTACATCGATTTTGTCTACATGAGTTACGGTGAGGTTAGGAGATaGGCAATGTTCTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHVIIDFVYIDFVYMSYGEVRR*AMFCTA Trigger: GGCAGTGCAGAACATTGCTCATCTCCTAACCTCACC...GTAACTCATGTAGACAAAATCGATGTAGACAAAATCGATGATGACATGGAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | GACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAATACAGGTTTCCACACCGCATaGTCCTGGAAACTGGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DQILHLHKAAHSFVLINTGFHTA*SWKLVR Trigger: TCGAACCAGTTTCCAGGATCATGCGGTGTGGAAACC...TGTATTTATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTTACTGGTACAGCTCGACAGCTCCTaGTTCCAAAATTGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVHDCLSNVLLVSLQLLVQLDSS*FQNWLF Trigger: AAAGAGCCAATTTTGGAATCAGGAGCTGTCGAGCTG...TACCAGTAACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | GCTAATATTGATGGCAGTAAGATGCTAGCTTACCATCTGCACAGCACCATGTACTTTGAGTCTGCCGACTaGCTCAGTTTGTGTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ANIDGSKMLAYHLHSTMYFESAD*LSLCRI Trigger: TATTCTACACAAACTGAGTCAGTCGGCAGACTCAAA...GTACATGGTGCTGTGCAGATGGTAAGCTAGCATCTTACTGCCATCAATATTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | GACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAAATACACTTGTCACAGAGGTTTaGGTCTGCCGACTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQILHLHKAAHSFVLINTLVTEV*VCRLTQ Trigger: CTGAGTCAGTCGGCAGACTCAAACCTCTGTGACAAG...TGTATTTATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | ACGTTGTCTCTTGTGATACACCACATGTCTAAAGTGAACAAAATATTTCAGTGTGGACCTGCTCAGCAGTaGCATGAGGTGTGGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSLVIHHMSKVNKIFQCGPAQQ*HEVWYH Trigger: GTGATACCACACCTCATGGCACTGCTGAGCAGGTCC...ACACTGAAATATTTTGTTCACTTTAGACATGTGGTGTATCACAAGAGACAACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | TTAATGACAAAATCAGCAGGCCAGTTATGTATCATTCCAGCATGGCCATGCCACAGGGTCATCGATACTTaGGGATTCTCAAAGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMTKSAGQLCIIPAWPCHRVIDT*GFSKAK Trigger: TTTAGCCTTTGAGAATCCCCAAGTATCGATGACCCT...GTGGCATGGCCATGCTGGAATGATACATAACTGGCCTGCTGATTTTGTCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR CAA 72 bp | GGTCTTCAGCCCTCTCATGCTATTTTGGGTTCACGATaGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQPSHAILGSR*SQQRVIGFFTV Trigger: AACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCAAAATAGCATGAGAGGGCTGAAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAGGTGAGGTTAGGAGATaGGCAATGTTCTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKIPIQMERVSQSSCSIGEVRR*AMFCTA Trigger: GGCAGTGCAGAACATTGCTCATCTCCTAACCTCACC...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGGACCCATGTAATATTTaGTTTTCTGCAGGATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKGEQNAVLGPEAALRTWDPCNI*FSAGCH Trigger: ATGACATCCTGCAGAAAATCAAATATTACATGGGTC...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGCTGCAGTTTGACATGTaGATGACCCATGTAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: TKGEQNAVLGPEAALRTWLQFDM*MTHVIF Trigger: AAATATTACATGGGTCATTCACATGTCAAACTGCAG...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGAGAGAAGCATTTCAGTaGTTGCATTCGAACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKGEQNAVLGPEAALRTWREAFQ*LHSNFV Trigger: TACAAAGTTCGAATGCAAGCACTGAAATGCTTCTCT...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCACGATTGTCTCAGCAACGTGTTATTGGTTTCTTTACAGTTACTGGTATTTGCTGACGTGAGCTaGATCTCAATAGGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: WVHDCLSNVLLVSLQLLVFADVS*ISIGLS Trigger: GGATAAGCCTATTGAGATGCAGCTCACGTCAGCAAA...TACCAGTAACTGTAAAGAAACCAATAACACGTTGCTGAGACAATCGTGAACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR GCA 90 bp | AAAATACAAAGAAGTACAAACGAGCATCCTACTCCCATGATGGAGAGTCCATCTTTTGCTGACGTGAGCTaGATCTCAATAGGCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: KIQRSTNEHPTPMMESPSFADVS*ISIGLS Trigger: GGATAAGCCTATTGAGATGCAGCTCACGTCAGCAAA...AGATGGACTCTCCATCATGGGAGTAGGATGCTCGTTTGTACTTCTTTGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| 3UTR CAA 72 bp | GGAGCCAGGTTAGAATTTAACACTACACTGCACTTCTaGCCTACAACTACCTCCATAAAGAACATGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GARLEFNTTLHF*PTTTSIKNMSS Trigger: TGAACTCATGTTCTTTATGGAGGTAGTTGTAGGCAAGAAGTGCAGTGTAGTGTTAAATTCTAACCTGGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | GCCTACAACTACCTCCATAAAGAACATGAGTTCAGTGTCACACTAACATGGGGTAGAGAAGCATTTCAGTaGTTGCATTCGAACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AYNYLHKEHEFSVTLTWGREAFQ*LHSNFV Trigger: TACAAAGTTCGAATGCAAGCACTGAAATGCTTCTCT...ACCCCATGTTAGTGTGACACTGAACTCATGTTCTTTATGGAGGTAGTTGTAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | AAAATACAAAGAAGTACAAACGAGCATCCTACTCCCATGATGGAGAGTCCATCTGTAACCTCTCCTTACTaGACATTCGAACCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIQRSTNEHPTPMMESPSVTSPY*TFEPNK Trigger: CTTGTTTGGTTCGAATGTGCAGTAAGGAGAGGTTAC...AGATGGACTCTCCATCATGGGAGTAGGATGCTCGTTTGTACTTCTTTGTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAGATCTGGATAAACTGTaGAAACATCTGACAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LADQILHLHKAAHSFVLIDLDKL*KHLTAA Trigger: AGCTGCTGTCAGATGTTTGCACAGTTTATCCAGATC...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATAATGTCTATGACACCTTaGAGAACTTTCTGGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LADQILHLHKAAHSFVLIMSMTP*RTFWGS Trigger: TGATCCCCAGAAAGTTCTCCAAGGTGTCATAGACAT...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CCA 90 bp | TCATCCAACATACTTGAGGTTGGTTCCTTCATTTCTCTAACAAGCCTAAAATTCCAGTGTGAGAAGATCTaGCAGATATACTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNILEVGSFISLTSLKFQCEKI*QIYSWV Trigger: CACCCAGGAGTATATCTGCCAGATCTTCTCACACTG...GAATTTTAGGCTTGTTAGAGAAATGAAGGAACCAACCTCAAGTATGTTGGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCCATGTCATCATCGATTTTGTCTACATCGATTTTGTCTACATGAGTTACAGCATGGCAATGAGGTaGTCGGTTATGCTAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLHVIIDFVYIDFVYMSYSMAMR*SVMLAI Trigger: AATCGCTAGCATAACCGACCACCTCATTGCCATGCT...GTAACTCATGTAGACAAAATCGATGTAGACAAAATCGATGATGACATGGAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCAACATACTTGAGGTTGGTTCCTTCATTTCTCTAACAAGCCTAAAATTCAGGGTCATCGATACTTaGGGATTCTCAAAGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSNILEVGSFISLTSLKFRVIDT*GFSKAK Trigger: TTTAGCCTTTGAGAATCCCCAAGTATCGATGACCCT...GAATTTTAGGCTTGTTAGAGAAATGAAGGAACCAACCTCAAGTATGTTGGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAATGTCTATGACACCTTaGAGAACTTTCTGGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKIPIQMERVSQSSCSIMSMTP*RTFWGS Trigger: TGATCCCCAGAAAGTTCTCCAAGGTGTCATAGACAT...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185524.7 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAAAGGCAGGGATAATATaGCAGTCTAGTAGAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKIPIQMERVSQSSCSIKAGII*QSSRDL Trigger: CAAGTCTCTACTAGACTGCCATATTATCCCTGCCTT...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATAAGAGAAGCATTTCAGTaGTTGCATTCGAACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLKIPIQMERVSQSSCSIREAFQ*LHSNFV Trigger: TACAAAGTTCGAATGCAAGCACTGAAATGCTTCTCT...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | TCCTACTCCCATGATGGAGAGTCCATCTCTCTAACTCCTGTTAGGCTACGGCATTGTCATCTGTGCGAATaGCTCCAGCTCTGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: SYSHDGESISLTPVRLRHCHLCE*LQLCTC Trigger: ACATGTGCAGAGCTGGAGCAATTCGCACAGATGACA...ATGCCGTAGCCTAACAGGAGTTAGAGAGATGGACTCTCCATCATGGGAGTAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATATTGATGGCAGTAAGATGCTAGCTTACCATCTGCACAGCACCATGTACGCTGCAGCGCCGTCTTaGCCTTGTCACAGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANIDGSKMLAYHLHSTMYAAAPS*PCHRGL Trigger: CAAACCTCTGTGACAAGGCAAAGACGGCGCTGCAGC...GTACATGGTGCTGTGCAGATGGTAAGCTAGCATCTTACTGCCATCAATATTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGCCTTGTCACAGAGGTTaGAGTCTGCCGACTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKGEQNAVLGPEAALRTWPCHRG*SLPTDS Trigger: TGAGTCAGTCGGCAGACTCAAACCTCTGTGACAAGG...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | AAATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTAGTAGAGACTTGACATaGTTTTCTGTGCCCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSEVSLTHTVIHPDSCACSRDLT*FSVPIA Trigger: TGCGATGGGCACAGAAAACAATGTCAAGTCTCTACT...ACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGCAGTCTAGTAGAGACTaGACATTGTTTTCTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGHKGRTECSIRARSCVKQSSRD*TLFSVP Trigger: GGGCACAGAAAACAATGTCAAGTCTCTACTAGACTG...CTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGTGCCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | AAATCTGAGGTATCCCTCACCCACACGGTCATTCATCCTGACTCCTGTGCATGTTATCAGAGTGACAGCTaGCATAATCTGCTTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KSEVSLTHTVIHPDSCACYQSDS*HNLLPM Trigger: CATGGGAAGCAGATTATGCAAGCTGTCACTCTGATA...ACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCTCAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS CCA 90 bp | TTCAGGTCTGGGGACAGTAGTCCTTGTAGTAAGGCAGGGATAATATaGCAGTCTAGTAGAGACTTGACATTGTTTTCTGTGCCCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FRSGDSSPCSKAGII*QSSRDLTLFSVPIA Trigger: TGCGATGGGCACAGAAAACAATGTCAAGTCTCTACTAGACTGCCATATTATCCCTGCCTTACTACAAGGACTACTGTCCCCAGACCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | CTAACATGGGGTGAGGTACCAGTGAGACATTTCAGAAGAGCTGGAAAGTTCAGAAGTAGAGACTTGACATaGTTTTCTGTGCCCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTWGEVPVRHFRRAGKFRSRDLT*FSVPIA Trigger: TGCGATGGGCACAGAAAACAATGTCAAGTCTCTACT...TCTGAACTTTCCAGCTCTTCTGAAATGTCTCACTGGTACCTCACCCCATGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | CTAACATGGGGTGAGGTACCAGTGAGACATTTCAGAAGAGCTGGAAAGTTCAGACAGTCTAGTAGAGACTaGACATTGTTTTCTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTWGEVPVRHFRRAGKFRQSSRD*TLFSVP Trigger: GGGCACAGAAAACAATGTCAAGTCTCTACTAGACTG...TCTGAACTTTCCAGCTCTTCTGAAATGTCTCACTGGTACCTCACCCCATGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTCCCCACTTCCTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACACTCCTGATTCCAAAATaGGCTCTTTACTTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLPTSLLTKYCTCIKQHTLLIPK*ALYLEK Trigger: TTTCTCCAAGTAAAGAGCCAATTTTGGAATCAGGAG...TGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAGGAAGTGGGGAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | TTAATGACAAAATCAGCAGGCCAGTTATGTATCATTCCAGCATGGCCATGCCACCAGTCTAGTAGAGACTaGACATTGTTTTCTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LMTKSAGQLCIIPAWPCHQSSRD*TLFSVP Trigger: GGGCACAGAAAACAATGTCAAGTCTCTACTAGACTG...GTGGCATGGCCATGCTGGAATGATACATAACTGGCCTGCTGATTTTGTCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGACCAAATACTGCACCTGCATAAAGCAGCACACAGCTTTGTTTTAATATGTCATCTGTGCGAATaGCTCCAGCTCTGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: LADQILHLHKAAHSFVLICHLCE*LQLCTC Trigger: ACATGTGCAGAGCTGGAGCAATTCGCACAGATGACA...TATTAAAACAAAGCTGTGTGCTGCTTTATGCAGGTGCAGTATTTGGTCAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGAGAACAGAATGCAGTATTAGGGCCAGAAGCTGCGTTAAGAACTTGGCCTAGAACGATGAGGTaGGCTTTCTGTTTATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TKGEQNAVLGPEAALRTWPRTMR*AFCLLF Trigger: AAACAATAAACAGAAAGCCAACCTCATCGTTCTAGG...CCAAGTTCTTAACGCAGCTTCTGGCCCTAATACTGCATTCTGTTCTCCCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | GCTAATATTGATGGCAGTAAGATGCTAGCTTACCATCTGCACAGCACCATGTACTTTTCAGCTCTGTACTaGAGGTTTCTTGTTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ANIDGSKMLAYHLHSTMYFSALY*RFLVEA Trigger: TGCTTCAACAAGAAACCTCAAGTACAGAGCTGAAAA...GTACATGGTGCTGTGCAGATGGTAAGCTAGCATCTTACTGCCATCAATATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS-3UTR CAA 90 bp | GTCAGTCAATCATCATGTTCAATAGAAAAACATGTTACTACAGCAACTCATGACTGTCATCTGTGCGAATaGCTCCAGCTCTGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: VSQSSCSIEKHVTTATHDCHLCE*LQLCTC Trigger: ACATGTGCAGAGCTGGAGCAATTCGCACAGATGACA...GTCATGAGTTGCTGTAGTAACATGTTTTTCTATTGAACATGATGATTGACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | AAAATACAAAGAAGTACAAACGAGCATCCTACTCCCATGATGGAGAGTCCATCTTTTTCAGCTCTGTACTaGAGGTTTCTTGTTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KIQRSTNEHPTPMMESPSFSALY*RFLVEA Trigger: TGCTTCAACAAGAAACCTCAAGTACAGAGCTGAAAA...AGATGGACTCTCCATCATGGGAGTAGGATGCTCGTTTGTACTTCTTTGTATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | TCATCCAACATACTTGAGGTTGGTTCCTTCATTTCTCTAACAAGCCTAAAATTCAGTAGAGACTTGACATaGTTTTCTGTGCCCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSNILEVGSFISLTSLKFSRDLT*FSVPIA Trigger: TGCGATGGGCACAGAAAACAATGTCAAGTCTCTACT...GAATTTTAGGCTTGTTAGAGAAATGAAGGAACCAACCTCAAGTATGTTGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS TCA 90 bp | CTTGTTGAAGCAAATACAACAATCTTGGAACCGCTCCTAGAACGATaGGGTTGGCTTTCTGTTTATTGTTTCCAATTACAGCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVEANTTILEPLLER*GWLSVYCFQLQHFS Trigger: TGAAAAATGCTGTAATTGGAAACAATAAACAGAAAGCCAACCTCATCGTTCTAGGAGCGGTTCCAAGATTGTTGTATTTGCTTCAACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCCATGTCATCATCGATTTTGTCTACATCGATTTTGTCTACATGAGTTACCCTAGAACGATGAGGTaGGCTTTCTGTTTATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLHVIIDFVYIDFVYMSYPRTMR*AFCLLF Trigger: AAACAATAAACAGAAAGCCAACCTCATCGTTCTAGG...GTAACTCATGTAGACAAAATCGATGTAGACAAAATCGATGATGACATGGAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAAAATACCAATACAGATGGAGAGAGTCAGTCAATCATCATGTTCAATACCTAGAACGATGAGGTaGGCTTTCTGTTTATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLKIPIQMERVSQSSCSIPRTMR*AFCLLF Trigger: AAACAATAAACAGAAAGCCAACCTCATCGTTCTAGG...TATTGAACATGATGATTGACTGACTCTCTCCATCTGTATTGGTATTTTAAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS GCA 72 bp | GATATACTCCTGGGTGTAGCGGGACCTGCTCAGCAGTaGCATGAGGTGTGGTATCACCGTAGCATCTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: DILLGVAGPAQQ*HEVWYHRSICI Trigger: TATACAGATGCTACGGTGATACCACACCTCATGGCACTGCTGAGCAGGTCCCGCTACACCCAGGAGTATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS GCA 72 bp | GTCCCATCTGCAATGTTGGCTAGGATGCACAGGGTCTaGTCTTTGACTTCAATGCTATGCTCCCCTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPSAMLARMHRV*SLTSMLCSPSS Trigger: ACTGGAAGGGGAGCATAGCATTGAAGTCAAAGAGCAGACCCTGTGCATCCTAGCCAACATTGCAGATGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035043.12 |
||
| CDS CAA 72 bp | GCAGGGATAATATGGCAGTCTAGTAGAGACTTGACATaGTTTTCTGTGCCCATCGCAAGACTCCCTAACACC | + |
|
Preference number: 6 (lower is better) Translates to: AGIIWQSSRDLT*FSVPIARLPNT Trigger: GGTGTTAGGGAGTCTTGCGATGGGCACAGAAAACAATGTCAAGTCTCTACTAGACTGCCATATTATCCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS CAA 90 bp | TGTAGTAAGGCAGGGATAATATGGCAGTCTAGTAGAGACTTGACATaGTTTTCTGTGCCCATCGCAAGACTCCCTAACACCACTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: CSKAGIIWQSSRDLT*FSVPIARLPNTTAH Trigger: ATGTGCAGTGGTGTTAGGGAGTCTTGCGATGGGCACAGAAAACAATGTCAAGTCTCTACTAGACTGCCATATTATCCCTGCCTTACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS CAA 90 bp | AGTCCTTGTAGTAAGGCAGGGATAATATGGCAGTCTAGTAGAGACTaGACATTGTTTTCTGTGCCCATCGCAAGACTCCCTAACACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SPCSKAGIIWQSSRD*TLFSVPIARLPNTT Trigger: AGTGGTGTTAGGGAGTCTTGCGATGGGCACAGAAAACAATGTCAAGTCTCTACTAGACTGCCATATTATCCCTGCCTTACTACAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS CAA 72 bp | AGTAAGGCAGGGATAATATGGCAGTCTAGTAGAGACTaGACATTGTTTTCTGTGCCCATCGCAAGACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SKAGIIWQSSRD*TLFSVPIARLP Trigger: AGGGAGTCTTGCGATGGGCACAGAAAACAATGTCAAGTCTCTACTAGACTGCCATATTATCCCTGCCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS CCA 72 bp | GGGGACAGTAGTCCTTGTAGTAAGGCAGGGATAATATaGCAGTCTAGTAGAGACTTGACATTGTTTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDSSPCSKAGII*QSSRDLTLFSV Trigger: CACAGAAAACAATGTCAAGTCTCTACTAGACTGCCATATTATCCCTGCCTTACTACAAGGACTACTGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS CCA 72 bp | CCATCAACCAAAACGTTTACCAGGGTCATCGATACTTaGGGATTCTCAAAGGCTAAAACAGAGAAGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSTKTFTRVIDT*GFSKAKTEKHF Trigger: GAAATGCTTCTCTGTTTTAGCCTTTGAGAATCCCCAAGTATCGATGACCCTGGTAAACGTTTTGGTTGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||
| CDS CAA 90 bp | AATCTTGGAACCGCTCCTAGAACGATGAGGTTGGCTTTCTGTTTATaGTTTCCAATTACAGCATTTTTCATGTCTATGACACCTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLGTAPRTMRLAFCL*FPITAFFMSMTPWR Trigger: TCTCCAAGGTGTCATAGACATGAAAAATGCTGTAATTGGAAACAATAAACAGAAAGCCAACCTCATCGTTCTAGGAGCGGTTCCAAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 |
||
| CDS TCA 72 bp | GCAAATACAACAATCTTGGAACCGCTCCTAGAACGATaGGGTTGGCTTTCTGTTTATTGTTTCCAATTACAG | + |
|
Preference number: 6 (lower is better) Translates to: ANTTILEPLLER*GWLSVYCFQLQ Trigger: CTGTAATTGGAAACAATAAACAGAAAGCCAACCTCATCGTTCTAGGAGCGGTTCCAAGATTGTTGTATTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035043.12 ENSMUST00000185524.7 ENSMUST00000186049.2 |
||