Pregenerated sensors for ARMC7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057219Ensembl transcript IDs: ENSMUST00000035240.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGAGACAAGGCATGCCCGGGTGCCCTCAGTTCTCCTTCATTCTaGTCTCACACCTGTAGGGCCTTGTTCTTCATGCCCAATGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: QRDKACPGALSSPSF*SHTCRALFFMPNGH Trigger: ATGGCCATTGGGCATGAAGAACAAGGCCCTACAGGTGTGAGAGCAGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 90 bp | AAGCATCTCAAGTCTGGCTTCGTCCCTCCTCCTGTTTTCCCTGGATaGAAACGCCTGTCATGCCAAGACTGCAGCTTGCATGCAGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: KHLKSGFVPPPVFPG*KRLSCQDCSLHAAE Trigger: TTCAGCTGCATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAGGGAAAACAGGAGGAGGGACGAAGCCAGACTTGAGATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR TCA 90 bp | TTGTGGCTCCTGAGAGAATGGCAGGAAGCAGACTGGGATAGCCCATaGAAGGTTCATGTTCAGGGCTCCCACCCAAGTGTCAGAAGATCT | + |
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Preference number: 1 (lower is better) Translates to: LWLLREWQEADWDSP*KVHVQGSHPSVRRS Trigger: AGATCTTCTGACACTTGGGTGGGAGCCCTGAACATGAACCTTTCATGGGCTATCCCAGTCTGCTTCCTGCCATTCTCTCAGGAGCCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR TCA 90 bp | ACATTAGTTTCTAGGTGTCTTTATGGAAGGTCTGCATCTGAGTCCTaGGGGGTTGACAGTACCTACTGGAGGCTTGTGGCTCCTGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TLVSRCLYGRSASES*GVDSTYWRLVAPER Trigger: TCTCTCAGGAGCCACAAGCCTCCAGTAGGTACTGTCAACCCCTCAGGACTCAGATGCAGACCTTCCATAAAGACACCTAGAAACTAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCTTTTCCTTTTCAGCTCAGGATGGGAGCGGGAGCCTTCCTTCATCCAGTCACGAGGGCATTAGCTaGGCACTGGGGGCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CSFSFSAQDGSGSLPSSSHEGIS*ALGAAE Trigger: CTCTGCTGCCCCCAGTGCCCAGCTAATGCCCTCGTG...ACTGGATGAAGGAAGGCTCCCGCTCCCATCCTGAGCTGAAAAGGAAAAGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | TTCATGTTCAGGGCTCCCACCCAAGTGTCAGAAGATCTGACCCATAGGCAAAGGGCATTAGCTGGGCACTaGGGGCAGCAGAGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FMFRAPTQVSEDLTHRQRALAGH*GQQRWW Trigger: CCACCACCTCTGCTGCCCCCAGTGCCCAGCTAATGC...CCTTTGCCTATGGGTCAGATCTTCTGACACTTGGGTGGGAGCCCTGAACATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGTCAACCCAGGACACTCATGGTACTaGCCACTCTCCCAGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SQCYHAQILSLNTGGVNPGHSWY*PLSQGH Trigger: GTGCCCCTGGGAGAGTGGCCAGTACCATGAGTGTCC...TGGGTTGACTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCTCCAGAGAGACAAGGCATGCCCGGGTGCCCTCAGTTCTCCTTCATTCTCCTGTTTTCCCTGGATaGAAACGCCTGTCATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GLSRETRHARVPSVLLHSPVFPG*KRLSCQ Trigger: TTGGCATGACAGGCGTTTGCATCCAGGGAAAACAGG...AGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTGGAGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCCTTCATCCAGTGGCTGTACGACAGCCCCTCTCCAGCCCTTGTAGATCTTGGCTCCTGAGAGAATaGCAGGAAGCAGACTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: AFLHPVAVRQPLSSPCRSWLLRE*QEADWD Trigger: ATCCCAGTCTGCTTCCTGCCATTCTCTCAGGAGCCA...AGATCTACAAGGGCTGGAGAGGGGCTGTCGTACAGCCACTGGATGAAGGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTTTCAGCTCAGGATGGGAGCGGGAGCCTTCCTTCATCCAGTGGCTGTACAAGTGTCAGAAGATCTaGCCCATAGGCAAAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: FLFSSGWEREPSFIQWLYKCQKI*PIGKGG Trigger: GCCCCCTTTGCCTATGGGTCAGATCTTCTGACACTT...GTACAGCCACTGGATGAAGGAAGGCTCCCGCTCCCATCCTGAGCTGAAAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCCTTCATCCAGTGGCTGTACGACAGCCCCTCTCCAGCCCTTGTAGATCTCTGTCATGCCAAGACTaGAGCTTGCATGCAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: AFLHPVAVRQPLSSPCRSLSCQD*SLHAAE Trigger: TTCAGCTGCATGCAAGCTGCAGTCTTGGCATGACAG...AGATCTACAAGGGCTGGAGAGGGGCTGTCGTACAGCCACTGGATGAAGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGACAGGGATGCCACACTTGGCAGCTGGCACATGAGTGGTCCACAGCCTGGTGCAAACGCCTGTCATaGCAAGACTGCAGCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: KRQGCHTWQLAHEWSTAWCKRLS*QDCSLH Trigger: ATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCA...CCAGGCTGTGGACCACTCATGTGCCAGCTGCCAAGTGTGGCATCCCTGTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR GCA 90 bp | AGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGTCAACCCAGCCAAGACTGCAGCTTaGATGCAGCTGAACAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SQCYHAQILSLNTGGVNPAKTAA*MQLNKH Trigger: GTGCTTGTTCAGCTGCATGCAAGCTGCAGTCTTGGC...TGGGTTGACTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCCTTCATCCAGTGGCTGTACGACAGCCCCTCTCCAGCCCTTGTAGATCTATGCTATTAGCCTTCTaGTTCCTATACCTGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AFLHPVAVRQPLSSPCRSMLLAF*FLYLWQ Trigger: CTGCCACAGGTATAGGAAGCAGAAGGCTAATAGCAT...AGATCTACAAGGGCTGGAGAGGGGCTGTCGTACAGCCACTGGATGAAGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | ACACTTGGCAGCTGGCACATGAGTGGTCCACAGCCTGGTAAAACAGAAGTCACTTGGGGGCAGCAGAGGTaGTGGTCTGTCTGTAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: TLGSWHMSGPQPGKTEVTWGQQR*WSVCSL Trigger: TAAACTACAGACAGACCACCACCTCTGCTGCCCCCA...AGTGACTTCTGTTTTACCAGGCTGTGGACCACTCATGTGCCAGCTGCCAAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CAA 90 bp | TTTCTAGGTGTCTTTATGGAAGGTCTGCATCTGAGTCCTGAGGGGTaGACAGTACCTACTGGAGGCTTGTGGCTCCTGAGAGAATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FLGVFMEGLHLSPEG*TVPTGGLWLLREWQ Trigger: CTGCCATTCTCTCAGGAGCCACAAGCCTCCAGTAGGTACTGTCAACCCCTCAGGACTCAGATGCAGACCTTCCATAAAGACACCTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTTCTGCAGAGCTCTCCAAGTCAATGCTACCATGCCCAGATACTCAGCCTGAACAAGCACCACTTTaGGCAGGATGGGCTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: FCSAELSKSMLPCPDTQPEQAPL*AGWAQD Trigger: ATCCTGAGCCCATCCTGCGCAAAGTGGTGCTTGTTC...AGGCTGAGTATCTGGGCATGGTAGCATTGACTTGGAGAGCTCTGCAGAACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | TTCATGTTCAGGGCTCCCACCCAAGTGTCAGAAGATCTGACCCATAGGCAAAGGGGGCAGCAGAGGTGGTaGTCTGTCTGTAGTTTATTG | + |
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Preference number: 2 (lower is better) Translates to: FMFRAPTQVSEDLTHRQRGQQRW*SVCSLL Trigger: CAATAAACTACAGACAGACCACCACCTCTGCTGCCC...CCTTTGCCTATGGGTCAGATCTTCTGACACTTGGGTGGGAGCCCTGAACATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCAAGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGCCATCAAAATTACTCTaGACACTCATGGTACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ALQVNATMPRYSASTREEPSKLL*TLMVLA Trigger: GGCCAGTACCATGAGTGTCCAGAGTAATTTTGATGG...CTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACTTGGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CCA 90 bp | TTCATGTTCAGGGCTCCCACCCAAGTGTCAGAAGATCTGACCCATAGGCAAAGGGAGAGCAGGGCTGTGTaGATAGTTGTTTCTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FMFRAPTQVSEDLTHRQRESRAV*IVVSVL Trigger: CAGAACAGAAACAACTATCCACACAGCCCTGCTCTC...CCTTTGCCTATGGGTCAGATCTTCTGACACTTGGGTGGGAGCCCTGAACATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | AGCTCAGGATGGGAGCGGGAGCCTTCCTTCATCCAGTaGCTGTACGACAGCCCCTCTCCAGCCCTTGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: SSGWEREPSFIQ*LYDSPSPALVD Trigger: ATCTACAAGGGCTGGAGAGGGGCTGTCGTACAGCCACTGGATGAAGGAAGGCTCCCGCTCCCATCCTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | TGTAGGGCCTCTCCAGAGAGACAAGGCATGCCCGGGTaGCCTCAGTTCTCCTTCATTCTGCTCTCACACCTG | + |
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Preference number: 3 (lower is better) Translates to: CRASPERQGMPG*PQFSFILLSHL Trigger: CAGGTGTGAGAGCAGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTGGAGAGGCCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | TTAAGCTGTGACACCCAAGGGAAGACACTTCACCTCTaGATTCCTCTTAGGGCGCCTCGCAGAGAGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LSCDTQGKTLHL*IPLRAPRREQG Trigger: GCCCTGCTCTCTGCGAGGCGCCCTAAGAGGAATGCAGAGGTGAAGTGTCTTCCCTTGGGTGTCACAGCTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | AAGGCATGCCCGGGTGCCCTCAGTTCTCCTTCATTCTaGTCTCACACCTGTAGGGCCTTGTTCTTCATGCCC | + |
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Preference number: 3 (lower is better) Translates to: KACPGALSSPSF*SHTCRALFFMP Trigger: GGGCATGAAGAACAAGGCCCTACAGGTGTGAGAGCAGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | GGATCCTATGTAGGGCCTCTCCAGAGAGACAAGGCATaGCCGGGTGCCCTCAGTTCTCCTTCATTCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GSYVGPLQRDKA*PGALSSPSFCS Trigger: AGAGCAGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTGGAGAGGCCCTACATAGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | GGCACAGCTTCTTACACGAGGGCATTAGCTGGGCACTaGGGGCAGCAGAGGTGGTGGTCTGTCTGTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: GTASYTRALAGH*GQQRWWSVCSL Trigger: TAAACTACAGACAGACCACCACCTCTGCTGCCCCCAGTGCCCAGCTAATGCCCTCGTGTAAGAAGCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR TCA 72 bp | CTGACCCATAGGCAAAGGGGGCCAGAGCAACTCTTTTaGAAAGACAGGGATGCCACACTTGGCAGCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: LTHRQRGPEQLF*KDRDATLGSWH Trigger: GTGCCAGCTGCCAAGTGTGGCATCCCTGTCTTTTCAAAAGAGTTGCTCTGGCCCCCTTTGCCTATGGGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | ACGAGGGCATTAGCTGGGCACTGGGGGCAGCAGAGGTaGTGGTCTGTCTGTAGTTTATTGATTGCCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: TRALAGHWGQQR*WSVCSLLIASP Trigger: TGGACTGGCAATCAATAAACTACAGACAGACCACCACCTCTGCTGCCCCCAGTGCCCAGCTAATGCCCTCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | AGTCCTGAGGGGTTGACAGTACCTACTGGAGGCTTGTaGCTCCTGAGAGAATGGCAGGAAGCAGACTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SPEGLTVPTGGL*LLREWQEADWD Trigger: ATCCCAGTCTGCTTCCTGCCATTCTCTCAGGAGCCACAAGCCTCCAGTAGGTACTGTCAACCCCTCAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR TCA 72 bp | CTGAGAGAATGGCAGGAAGCAGACTGGGATAGCCCATaGAAGGTTCATGTTCAGGGCTCCCACCCAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LREWQEADWDSP*KVHVQGSHPSV Trigger: GACACTTGGGTGGGAGCCCTGAACATGAACCTTTCATGGGCTATCCCAGTCTGCTTCCTGCCATTCTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | CTGGATGCAAACGCCTGTCATGCCAAGACTGCAGCTTaGATGCAGCTGAACAAGCACCACTTTGCGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: LDANACHAKTAA*MQLNKHHFAQD Trigger: ATCCTGCGCAAAGTGGTGCTTGTTCAGCTGCATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | CCTCCTCCTGTTTTCCCTGGATGCAAACGCCTGTCATaGCAAGACTGCAGCTTGCATGCAGCTGAACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PPPVFPGCKRLS*QDCSLHAAEQA Trigger: TGCTTGTTCAGCTGCATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAGGGAAAACAGGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | AAGTCTGGCTTCGTCCCTCCTCCTGTTTTCCCTGGATaGAAACGCCTGTCATGCCAAGACTGCAGCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: KSGFVPPPVFPG*KRLSCQDCSLH Trigger: ATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAGGGAAAACAGGAGGAGGGACGAAGCCAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | TCTCAAGTCTGGCTTCGTCCCTCCTCCTGTTTTCCCTaGATGCAAACGCCTGTCATGCCAAGACTGCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SQVWLRPSSCFP*MQTPVMPRLQL Trigger: AAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAGGGAAAACAGGAGGAGGGACGAAGCCAGACTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | TTCCTCTTAGGGCGCCTCGCAGAGAGCAGGGCTGTGTaGATAGTTGTTTCTGTTCTGCAGAGCTCTCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: FLLGRLAESRAV*IVVSVLQSSPS Trigger: ACTTGGAGAGCTCTGCAGAACAGAAACAACTATCCACACAGCCCTGCTCTCTGCGAGGCGCCCTAAGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR TCA 72 bp | GAAAAGACAGGGATGCCACACTTGGCAGCTGGCACATaGGTGGTCCACAGCCTGGTAAAACAGAAGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: EKTGMPHLAAGT*VVHSLVKQKSL Trigger: CAGTGACTTCTGTTTTACCAGGCTGTGGACCACTCATGTGCCAGCTGCCAAGTGTGGCATCCCTGTCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | GTTTTCCCTGGATGCAAACGCCTGTCATGCCAAGACTaGAGCTTGCATGCAGCTGAACAAGCACCACTTTGC | + |
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Preference number: 3 (lower is better) Translates to: VFPGCKRLSCQD*SLHAAEQAPLC Trigger: GCAAAGTGGTGCTTGTTCAGCTGCATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAGGGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTGTTCTGCAGAGCTCTCCAAGTCAATGCTACCATGCCCAGATACTCAGCCTTGCCAAGACTGCAGCTaGCATGCAGCTGAACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FCSAELSKSMLPCPDTQPCQDCS*HAAEQA Trigger: TGCTTGTTCAGCTGCATGCAAGCTGCAGTCTTGGCA...AGGCTGAGTATCTGGGCATGGTAGCATTGACTTGGAGAGCTCTGCAGAACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR TCA 72 bp | GGGGGCAGCAGAGGTGGTGGTCTGTCTGTAGTTTATTaGTTGCCAGTCCATGAAAGCCATACCAGCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: GGSRGGGLSVVY*LPVHESHTSFG Trigger: ACCAAAGCTGGTATGGCTTTCATGGACTGGCAATCAATAAACTACAGACAGACCACCACCTCTGCTGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | GTGGTCCACAGCCTGGTAAAACAGAAGTCACTGTCTTaGTGTCTAACCCAAGGATCCTATGTAGGGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: VVHSLVKQKSLS*CLTQGSYVGPL Trigger: GAGAGGCCCTACATAGGATCCTTGGGTTAGACAGCAAGACAGTGACTTCTGTTTTACCAGGCTGTGGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CCA 72 bp | TTGCATGCAGCTGAACAAGCACCACTTTGCGCAGGATaGGCTCAGGATGCTATTAGCCTTCTGCTTCCTATA | + |
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Preference number: 3 (lower is better) Translates to: LHAAEQAPLCAG*AQDAISLLLPI Trigger: TATAGGAAGCAGAAGGCTAATAGCATCCTGAGCCCATCCTGCGCAAAGTGGTGCTTGTTCAGCTGCATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR GCA 72 bp | ATAGTTGTTTCTGTTCTGCAGAGCTCTCCAAGTCAATaGTACCATGCCCAGATACTCAGCCTCAACACGGGA | + |
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Preference number: 3 (lower is better) Translates to: IVVSVLQSSPSQ*YHAQILSLNTG Trigger: TCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACTTGGAGAGCTCTGCAGAACAGAAACAACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | CACTCTCCCAGGGGCACAGCTTCTTACACGAGGGCATTAGCTGGGCACTGGGGGCCTAGCCGCCCGACGTaGGGGTCTATCTTGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HSPRGTASYTRALAGHWGPSRPT*GSILGF Trigger: GAAACCCAAGATAGACCCCCACGTCGGGCGGCTAGG...CCCCCAGTGCCCAGCTAATGCCCTCGTGTAAGAAGCTGTGCCCCTGGGAGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | CACTCTCCCAGGGGCACAGCTTCTTACACGAGGGCATTAGCTGGGCACTGGGGGGGACGTGCTCCTTGTTaGCCTTGTCCGCGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: HSPRGTASYTRALAGHWGGRAPC*PCPRTG Trigger: ACCTGTGCGCGGACAAGGCCAACAAGGAGCACGTCC...CCCCCAGTGCCCAGCTAATGCCCTCGTGTAAGAAGCTGTGCCCCTGGGAGAGTG 62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCTCCAGAGAGACAAGGCATGCCCGGGTGCCCTCAGTTCTCCTTCATTCTATCCCCAGGGCAGAATaGGCCTGCTGGCTGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLSRETRHARVPSVLLHSIPRAE*ACWLWA Trigger: GGCCCACAGCCAGCAGGCCCATTCTGCCCTGGGGAT...AGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTGGAGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCTCCAGAGAGACAAGGCATGCCCGGGTGCCCTCAGTTCTCCTTCATTCTTCCGGAGCCGTGTGCTaGCAGAGATGGAGAAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: GLSRETRHARVPSVLLHSSGAVC*QRWRSA Trigger: TGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGA...AGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTGGAGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | AAAAGACAGGGATGCCACACTTGGCAGCTGGCACATGAGTGGTCCACAGCCTGGTGGGGCCTCAGTCTTTaGCAGTGGGATCCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KRQGCHTWQLAHEWSTAWWGLSL*QWDPQG Trigger: GCCCTGGGGATCCCACTGCCAAAGACTGAGGCCCCA...CCAGGCTGTGGACCACTCATGTGCCAGCTGCCAAGTGTGGCATCCCTGTCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR GCA 90 bp | TTCCTTTTCAGCTCAGGATGGGAGCGGGAGCCTTCCTTCATCCAGTGGCTGTACTGGAGAAGCGCAGCATaGACTGGACCACGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FLFSSGWEREPSFIQWLYWRSAA*TGPRAG Trigger: CCCTGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCA...GTACAGCCACTGGATGAAGGAAGGCTCCCGCTCCCATCCTGAGCTGAAAAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | AGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGTCAACCCATGGGCCTCAGCCACCTaGCTCGGCGAGCAGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SQCYHAQILSLNTGGVNPWASAT*LGEQKS Trigger: GGACTTCTGCTCGCCGAGCCAGGTGGCTGAGGCCCA...TGGGTTGACTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR GCA 90 bp | GCGCAGGATGGGCTCAGGATGCTATTAGCCTTCTGCTTCCTATACCTGTGGCAGGGTTCCGGAGCCGTGTaGTGGCAGAGATGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: AQDGLRMLLAFCFLYLWQGSGAV*WQRWRS Trigger: GCTTCTCCATCTCTGCCAGCACACGGCTCCGGAACC...CTGCCACAGGTATAGGAAGCAGAAGGCTAATAGCATCCTGAGCCCATCCTGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | CTCTGCATTCCTCTTAGGGCGCCTCGCAGAGAGCAGGGCTGTGTGGATAGTTGTTGGCTCTCGGTTTCCTaGAACTCTGTGACCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LCIPLRAPRREQGCVDSCWLSVS*NSVTSA Trigger: GGCGCTGGTCACAGAGTTCCAGGAAACCGAGAGCCA...ACAACTATCCACACAGCCCTGCTCTCTGCGAGGCGCCCTAAGAGGAATGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | GATGGGCTCAGGATGCTATTAGCCTTCTGCTTCCTATACCTGTGGCAGGATCTTTGGGCCTGCTGGCTGTaGGCCTCAGCCACCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DGLRMLLAFCFLYLWQDLWACWL*ASATWL Trigger: GAGCCAGGTGGCTGAGGCCCACAGCCAGCAGGCCCA...AAGATCCTGCCACAGGTATAGGAAGCAGAAGGCTAATAGCATCCTGAGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR GCA 90 bp | TTCATGTTCAGGGCTCCCACCCAAGTGTCAGAAGATCTGACCCATAGGCAAAGGCCCGCCTGCAGGACGTaGTCCTTGTTGGCCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FMFRAPTQVSEDLTHRQRPACRT*SLLALS Trigger: GGACAAGGCCAACAAGGAGCACGTCCTGCAGGCGGG...CCTTTGCCTATGGGTCAGATCTTCTGACACTTGGGTGGGAGCCCTGAACATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CAA 72 bp | CTGAGTCCTGAGGGGTTGACAGTACCTACTGGAGGCTaGTGGCTCCTGAGAGAATGGCAGGAAGCAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LSPEGLTVPTGG*WLLREWQEADW Trigger: CCAGTCTGCTTCCTGCCATTCTCTCAGGAGCCACAAGCCTCCAGTAGGTACTGTCAACCCCTCAGGACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | TGCGCAGGATGGGCTCAGGATGCTATTAGCCTTCTGCTTCCTATACCTGTGGCACGAAGTTGGCGAGGTTaGCGAGGACTTGCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: CAGWAQDAISLLLPIPVARSWRG*RGLAPW Trigger: CCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCG...TGCCACAGGTATAGGAAGCAGAAGGCTAATAGCATCCTGAGCCCATCCTGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CAA 72 bp | CCTGGATGCAAACGCCTGTCATGCCAAGACTGCAGCTaGCATGCAGCTGAACAAGCACCACTTTGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGCKRLSCQDCS*HAAEQAPLCAG Trigger: TCCTGCGCAAAGTGGTGCTTGTTCAGCTGCATGCAAGCTGCAGTCTTGGCATGACAGGCGTTTGCATCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR GCA 90 bp | AGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGTCAACCCAAGGTTGGCGAGGACTTaGTCCTTGGCATCTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQCYHAQILSLNTGGVNPRLART*SLASWL Trigger: GAGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCT...TGGGTTGACTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR GCA 90 bp | GCCTTCCTTCATCCAGTGGCTGTACGACAGCCCCTCTCCAGCCCTTGTAGATCTGTAGGTACTGGTAGTTaGCCGGGTCATAAGCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: AFLHPVAVRQPLSSPCRSVGTGS*PGHKRS Trigger: ACTTCGCTTATGACCCGGGCAACTACCAGTACCTAC...AGATCTACAAGGGCTGGAGAGGGGCTGTCGTACAGCCACTGGATGAAGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | TCTCCAAGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGTCTCCTCTAGGAATATCTaGGCCAGGTTCCGGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SPSQCYHAQILSLNTGGVSSRNI*ARFRSR Trigger: ACGGCTCCGGAACCTGGCCCAGATATTCCTAGAGGA...GACTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | AGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGTCAACCCAGGTCATAAGCGAAGTTaGCGAGGTTGGCGAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: SQCYHAQILSLNTGGVNPGHKRS*RGWRGL Trigger: AAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACC...TGGGTTGACTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CAA 72 bp | GTCTTTATGGAAGGTCTGCATCTGAGTCCTGAGGGGTaGACAGTACCTACTGGAGGCTTGTGGCTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VFMEGLHLSPEG*TVPTGGLWLLR Trigger: TCTCAGGAGCCACAAGCCTCCAGTAGGTACTGTCAACCCCTCAGGACTCAGATGCAGACCTTCCATAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CCA 90 bp | GATGGGCTCAGGATGCTATTAGCCTTCTGCTTCCTATACCTGTGGCAGGATCTTCTCAGTCTTTGGCAGTaGGATCCCCAGGGCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: DGLRMLLAFCFLYLWQDLLSLWQ*DPQGRM Trigger: CATTCTGCCCTGGGGATCCCACTGCCAAAGACTGAG...AAGATCCTGCCACAGGTATAGGAAGCAGAAGGCTAATAGCATCCTGAGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| 3UTR CAA 72 bp | AGTTCTCCTTCATTCTGCTCTCACACCTGTAGGGCCTaGTTCTTCATGCCCAATGGCCATTTAGTTAACACT | + |
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Preference number: 4 (lower is better) Translates to: SSPSFCSHTCRA*FFMPNGHLVNT Trigger: AGTGTTAACTAAATGGCCATTGGGCATGAAGAACAAGGCCCTACAGGTGTGAGAGCAGAATGAAGGAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | TTCCGGAGCCGTGTGCTGGCAGAGATGGAGAAGCGCAGCATGCACTaGACCACGGGCAGGGAGGTCAGCTCGGGATGGGAGCGGGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: FRSRVLAEMEKRSMH*TTGREVSSGWEREP Trigger: AGGCTCCCGCTCCCATCCCGAGCTGACCTCCCTGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | CTGGACCACGGGCAGGGAGGTCAGCTCGGGATGGGAGCGGGAGCCTaGCGAGCTCAGGTACATGAGAGTGGTGACAGCAGACAGCACCGT | + |
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Preference number: 5 (lower is better) Translates to: LDHGQGGQLGMGAGA*RAQVHESGDSRQHR Trigger: ACGGTGCTGTCTGCTGTCACCACTCTCATGTACCTGAGCTCGCCAGGCTCCCGCTCCCATCCCGAGCTGACCTCCCTGCCCGTGGTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | AAGCGCAGCATGCACTGGACCACGGGCAGGGAGGTCAGCTCGGGATaGGAGCGGGAGCCTGGCGAGCTCAGGTACATGAGAGTGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: KRSMHWTTGREVSSG*EREPGELRYMRVVT Trigger: TGTCACCACTCTCATGTACCTGAGCTCGCCAGGCTCCCGCTCCCATCCCGAGCTGACCTCCCTGCCCGTGGTCCAGTGCATGCTGCGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | GTCTTTGGCAGTGGGATCCCCAGGGCAGAATGGGCCTGCTGGCTGTaGGCCTCAGCCACCTGGCTCGGCGAGCAGAAGTCCTCTAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: VFGSGIPRAEWACWL*ASATWLGEQKSSRN Trigger: ATTCCTAGAGGACTTCTGCTCGCCGAGCCAGGTGGCTGAGGCCCACAGCCAGCAGGCCCATTCTGCCCTGGGGATCCCACTGCCAAAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | CTAGGAATATCTGGGCCAGGTTCCGGAGCCGTGTGCTGGCAGAGATaGAGAAGCGCAGCATGCACTGGACCACGGGCAGGGAGGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LGISGPGSGAVCWQR*RSAACTGPRAGRSA Trigger: AGCTGACCTCCCTGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGAACCTGGCCCAGATATTCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | CACTCTCCCAGGGGCACAGCTTCTTACACGAGGGCATTAGCTGGGCACTGGGGGTGCTCCTTGTTGGCCTaGTCCGCGCACAGGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HSPRGTASYTRALAGHWGCSLLA*SAHRLQ Trigger: CTGCAACCTGTGCGCGGACAAGGCCAACAAGGAGCA...CCCCCAGTGCCCAGCTAATGCCCTCGTGTAAGAAGCTGTGCCCCTGGGAGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS TCA 90 bp | GGACTTGCTCCTTGGCATCTTGGCTCTCGGTTTCCTGGAACTCTGTaGCCAGCGCCTGCAAGTAGCCTAGCCGCCCGACGTGGGGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: GLAPWHLGSRFPGTL*PAPASSLAARRGGL Trigger: TAGACCCCCACGTCGGGCGGCTAGGCTACTTGCAGGCGCTGGTCACAGAGTTCCAGGAAACCGAGAGCCAAGATGCCAAGGAGCAAGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | AGAAGTCCTCTAGGAATATCTGGGCCAGGTTCCGGAGCCGTGTGCTaGCAGAGATGGAGAAGCGCAGCATGCACTGGACCACGGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RSPLGISGPGSGAVC*QRWRSAACTGPRAG Trigger: CCCTGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGAACCTGGCCCAGATATTCCTAGAGGACTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS GCA 90 bp | AGCAGAAGTCCTCTAGGAATATCTGGGCCAGGTTCCGGAGCCGTGTaGTGGCAGAGATGGAGAAGCGCAGCATGCACTGGACCACGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SRSPLGISGPGSGAV*WQRWRSAACTGPRA Trigger: TGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGAACCTGGCCCAGATATTCCTAGAGGACTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | CTCTGCATTCCTCTTAGGGCGCCTCGCAGAGAGCAGGGCTGTGTGGATAGTTGTGCGAAGTTGGCGAGGTaGGCGAGGACTTGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LCIPLRAPRREQGCVDSCAKLAR*ARTCSL Trigger: CAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGC...ACAACTATCCACACAGCCCTGCTCTCTGCGAGGCGCCCTAAGAGGAATGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | GTAGTTGCCGTAGGTACTGGTAGTTGCCCGGGTCATAAGCGAAGTTaGCGAGGTTGGCGAGGACTTGCTCCTTGGCATCTTGGCTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: VVAVGTGSCPGHKRS*RGWRGLAPWHLGSR Trigger: CCGAGAGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTACCAGTACCTACGGCAACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | AAAAGACAGGGATGCCACACTTGGCAGCTGGCACATGAGTGGTCCACAGCCTGGGAGGTTGGCGAGGACTaGCTCCTTGGCATCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: KRQGCHTWQLAHEWSTAWEVGED*LLGILA Trigger: AGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCTC...CCAGGCTGTGGACCACTCATGTGCCAGCTGCCAAGTGTGGCATCCCTGTCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | TGCTCCTTTTCCTTTTCAGCTCAGGATGGGAGCGGGAGCCTTCCTTCATCCAGTAGGACGTGCTCCTTGTaGGCCTTGTCCGCGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: CSFSFSAQDGSGSLPSSSRTCSL*ALSAHR Trigger: CCTGTGCGCGGACAAGGCCAACAAGGAGCACGTCCT...ACTGGATGAAGGAAGGCTCCCGCTCCCATCCTGAGCTGAAAAGGAAAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 90 bp | GTAGGTACTGGTAGTTGCCCGGGTCATAAGCGAAGTTGGCGAGGTTaGCGAGGACTTGCTCCTTGGCATCTTGGCTCTCGGTTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: VGTGSCPGHKRSWRG*RGLAPWHLGSRFPG Trigger: TCCAGGAAACCGAGAGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTACCAGTACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | GCTCTCCAAGTCAATGCTACCATGCCCAGATACTCAGCCTCAACACGGGAGGAGGCGAGGACTTGCTCCTaGGCATCTTGGCTCTCGGTT | + |
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Preference number: 5 (lower is better) Translates to: ALQVNATMPRYSASTREEARTCS*ASWLSV Trigger: AACCGAGAGCCAAGATGCCAAGGAGCAAGTCCTCGC...CTCCTCCCGTGTTGAGGCTGAGTATCTGGGCATGGTAGCATTGACTTGGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | GATGGGCTCAGGATGCTATTAGCCTTCTGCTTCCTATACCTGTGGCAGGATCTTGTGGGGCCTCAGTCTTaGGCAGTGGGATCCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: DGLRMLLAFCFLYLWQDLVGPQS*AVGSPG Trigger: CCCTGGGGATCCCACTGCCAAAGACTGAGGCCCCAC...AAGATCCTGCCACAGGTATAGGAAGCAGAAGGCTAATAGCATCCTGAGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS GCA 90 bp | CAAGGAATAAGTCCAGGACTTGTAGTTGCCGTAGGTACTGGTAGTTaGCCGGGTCATAAGCGAAGTTGGCGAGGTTGGCGAGGACTTGCT | + |
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Preference number: 5 (lower is better) Translates to: QGISPGLVVAVGTGS*PGHKRSWRGWRGLA Trigger: AGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTACCAGTACCTACGGCAACTACAAGTCCTGGACTTATTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS-3UTR CAA 90 bp | GGCCTCTCCAGAGAGACAAGGCATGCCCGGGTGCCCTCAGTTCTCCTTCATTCTCCCCCAATAGCAAACTaGATTAGGGTTTCATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GLSRETRHARVPSVLLHSPPIAN*IRVSFS Trigger: AGAGAATGAAACCCTAATCAAGTTTGCTATTGGGGG...AGAATGAAGGAGAACTGAGGGCACCCGGGCATGCCTTGTCTCTCTGGAGAGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 72 bp | TCTGGGCCAGGTTCCGGAGCCGTGTGCTGGCAGAGATaGAGAAGCGCAGCATGCACTGGACCACGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SGPGSGAVCWQR*RSAACTGPRAG Trigger: CCCTGCCCGTGGTCCAGTGCATGCTGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGAACCTGGCCCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 72 bp | ATGCACTGGACCACGGGCAGGGAGGTCAGCTCGGGATaGGAGCGGGAGCCTGGCGAGCTCAGGTACATGAGA | + |
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Preference number: 6 (lower is better) Translates to: MHWTTGREVSSG*EREPGELRYMR Trigger: TCTCATGTACCTGAGCTCGCCAGGCTCCCGCTCCCATCCCGAGCTGACCTCCCTGCCCGTGGTCCAGTGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 72 bp | ACCTGGCTCGGCGAGCAGAAGTCCTCTAGGAATATCTaGGCCAGGTTCCGGAGCCGTGTGCTGGCAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: TWLGEQKSSRNI*ARFRSRVLAEM Trigger: CATCTCTGCCAGCACACGGCTCCGGAACCTGGCCCAGATATTCCTAGAGGACTTCTGCTCGCCGAGCCAGGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS GCA 72 bp | CCTCTAGGAATATCTGGGCCAGGTTCCGGAGCCGTGTaGTGGCAGAGATGGAGAAGCGCAGCATGCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: PLGISGPGSGAV*WQRWRSAACTG Trigger: TCCAGTGCATGCTGCGCTTCTCCATCTCTGCCAGCACACGGCTCCGGAACCTGGCCCAGATATTCCTAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 72 bp | GGTAGTTGCCCGGGTCATAAGCGAAGTTGGCGAGGTTaGCGAGGACTTGCTCCTTGGCATCTTGGCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GSCPGHKRSWRG*RGLAPWHLGSR Trigger: CCGAGAGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CAA 90 bp | GTAGTTGCCCGGGTCATAAGCGAAGTTGGCGAGGTTGGCGAGGACTaGCTCCTTGGCATCTTGGCTCTCGGTTTCCTGGAACTCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VVARVISEVGEVGED*LLGILALGFLELCD Trigger: GTCACAGAGTTCCAGGAAACCGAGAGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CAA 72 bp | CGGGTCATAAGCGAAGTTGGCGAGGTTGGCGAGGACTaGCTCCTTGGCATCTTGGCTCTCGGTTTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RVISEVGEVGED*LLGILALGFLE Trigger: TTCCAGGAAACCGAGAGCCAAGATGCCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS GCA 72 bp | AGTCCAGGACTTGTAGTTGCCGTAGGTACTGGTAGTTaGCCGGGTCATAAGCGAAGTTGGCGAGGTTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SPGLVVAVGTGS*PGHKRSWRGWR Trigger: TCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTACCAGTACCTACGGCAACTACAAGTCCTGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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| CDS CCA 72 bp | GTAGGTACTGGTAGTTGCCCGGGTCATAAGCGAAGTTaGCGAGGTTGGCGAGGACTTGCTCCTTGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: VGTGSCPGHKRS*RGWRGLAPWHL Trigger: AAGATGCCAAGGAGCAAGTCCTCGCCAACCTCGCCAACTTCGCTTATGACCCGGGCAACTACCAGTACCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035240.7 |
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