Pregenerated sensors for ARMC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002343Ensembl transcript IDs: ENSMUST00000019679.12, ENSMUST00000130319.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTGGTaGCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: QGACPRSRVINCLEW*PDCRLALLGHQLVE Trigger: CTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CCA 90 bp | ACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTaGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: TQGACPRSRVINCLE*CPDCRLALLGHQLV Trigger: CACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR GCA 90 bp | GTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCCTaGCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: VVGHQVITASALPTP*PASTLVLWVAWEGG Trigger: TCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCAGGGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CCA 90 bp | AGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTaGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAAGGAGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RHLPPPIMRILGNQP*LKHLYPGGLPKEQG Trigger: ACCCTGCTCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR TCA 90 bp | ACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGCTaGAGCACCTCTACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATC | + |
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Preference number: 1 (lower is better) Translates to: TSLLPSCGSWGISLG*STSTQGACPRSRVI Trigger: GATAACCCTGCTCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CCA 90 bp | AGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTaGAGGCCTCAAACTCCAGACAGAACACTGCAGTTCCATGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SGARIAGWPCWDTSL*RPQTPDRTLQFHVP Trigger: GGGCACATGGAACTGCAGTGTTCTGTCTGGAGTTTGAGGCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR GCA 90 bp | GGGTTATCAACTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTaGTGGGACACCAGCTTGTGGAGGCCTCAAACTCCAGACAGAACA | + |
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Preference number: 1 (lower is better) Translates to: GLSTAWSGARIAGWP*WDTSLWRPQTPDRT Trigger: TGTTCTGTCTGGAGTTTGAGGCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CAA 90 bp | GAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTaGGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAAGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ETPPSSHHADLGESA*AEAPLPRGPAQGAG Trigger: CCCTGCTCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTGGTGCCCGATTGCAGGCTGGCCCTaGTGGGACACCAGCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TQGACPRSRVINCLEWCPIAGWP*WDTSLW Trigger: CCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAAT...CGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR CCA 90 bp | GACACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCGTGCTCTGGGTAGCATaGGAAGGAGGACAGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: DTGSGGPPGHHCFCPPHPVLWVA*EGGQRG Trigger: GCCTCTCTGTCCTCCTTCCCATGCTACCCAGAGCAC...GGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CAA 90 bp | CTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTGGTGCCCGGATaGCAGGCTGGCCCTGCTGGGACACCAGCTTGTGGAGGCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LPKEQGYQLLGVVPG*QAGPAGTPACGGLK Trigger: TTTGAGGCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CAA 90 bp | AGGACAATTTGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTaGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCAGGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTIWRRHLPPPIMRI*GNQPWLKHLYPGGL Trigger: CAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCAAATTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR GCA 90 bp | ACAGAACACTGCAGTTCCATGTGCCCTTTGTCCCAAAGCTGCAGAGAGCAGCTGGGTCATCACTGCTTCTaGCCTCCCCACCCCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TEHCSSMCPLSQSCREQLGHHCF*PPHPLP Trigger: GGGCAGGGGGTGGGGAGGGCAGAAGCAGTGATGACC...CAGCTGCTCTCTGCAGCTTTGGGACAAAGGGCACATGGAACTGCAGTGTTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACACGCCCTCCCCACCCCCTaGCCTGCTAGCACACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: MCAPQHTYRVQRTIWRRHALPTP*PASTLV Trigger: CACAAGTGTGCTAGCAGGGCAGGGGGTGGGGAGGGC...GTGTCTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACACGCAGGCTGGCCCTGCTaGGACACCAGCTTGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: MCAPQHTYRVQRTIWRRHAGWPC*DTSLWR Trigger: CCTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGC...GTGTCTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACACCCACCAGGTCATCACTaGTTCTGCCCTCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: MCAPQHTYRVQRTIWRRHPPGHH*FCPPHP Trigger: GGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGG...GTGTCTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR GCA 72 bp | ACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTaGTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: TQGACPRSRVIN*LEWCPDCRLAL Trigger: CAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTGGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CCA 72 bp | GCCTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTaGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: ACPRSRVINCLE*CPDCRLALLGH Trigger: GTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR TCA 72 bp | CTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGCTaGAGCACCTCTACCCAGGGGGCCTGCCCAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LPSCGSWGISLG*STSTQGACPRS Trigger: GCTCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR GCA 72 bp | ACTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTaGTGGGACACCAGCTTGTGGAGGCCTCAAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: TAWSGARIAGWP*WDTSLWRPQTP Trigger: TGGAGTTTGAGGCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CCA 72 bp | CCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTaGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PPPIMRILGNQP*LKHLYPGGLPK Trigger: CTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR GCA 72 bp | AGCAGGGTTATCAACTGCTTGGAGTGGTGCCCGGATTaGAGGCTGGCCCTGCTGGGACACCAGCTTGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SRVINCLEWCPD*RLALLGHQLVE Trigger: CTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTTGATAACCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR CAA 90 bp | ATCATGCGGATCTTGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCAGGGGGCTGCTGGGACACCAGCTaGTGGAGGCCTCAAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: IMRILGNQPWLKHLYPGGCWDTS*WRPQTP Trigger: TGGAGTTTGAGGCCTCCACAAGCTGGTGTCCCAGCA...GCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR-3UTR CAA 90 bp | TGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGAGTTCCATGTGCCCTTaGTCCCAAAGCTGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: WRRHLPPPIMRILGNQPWSSMCP*SQSCRE Trigger: CTCTCTGCAGCTTTGGGACAAAGGGCACATGGAACT...CCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR GCA 72 bp | CCAGCTTGTGGAGGCCTCAAACTCCAGACAGAACACTaGAGTTCCATGTGCCCTTTGTCCCAAAGCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PACGGLKLQTEH*SSMCPLSQSCR Trigger: TCTGCAGCTTTGGGACAAAGGGCACATGGAACTGCAGTGTTCTGTCTGGAGTTTGAGGCCTCCACAAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | GGACACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCTGGGGGCTGGCCAGGTaGCGAGTCATAGCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GHWQWWATRSSLLLPSPPWGLAR*RVIAAT Trigger: TGTGGCTGCTATGACTCGGCACCTGGCCAGCCCCCA...GGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGTGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | ACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCCTGGGCAGCCAGGAGGATTaGGTAGGCTCCCTTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TGSGGPPGHHCFCPPHPLGSQED*VGSLLG Trigger: GCCCAGAAGGGAGCCTACCCAATCCTCCTGGCTGCC...CAGGGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR TCA 90 bp | ATCATGCGGATCTTGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCAGGGGGCCCCAGCAGGCCTCCCTaGCCACATCGGCGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IMRILGNQPWLKHLYPGGPSRPP*PHRRAG Trigger: GCCAGCACGCCGATGTGGTCAGGGAGGCCTGCTGGG...GCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR TCA 90 bp | GACACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCCTCGGGCTTGCAAAATaGGCTCCTCTGCCCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: DTGSGGPPGHHCFCPPHPLGLAK*APLPPG Trigger: ACCTGGGGGCAGAGGAGCTCATTTTGCAAGCCCGAG...GGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | CTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTCTTTGCTCACACACCTaGGGGCTGGCCAGGTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LLGVVPGLQAGPAGTPACLCSHT*GLARCR Trigger: TCGGCACCTGGCCAGCCCCCAGGTGTGTGAGCAAAG...ACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | GACACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCCGGCTGGCCTTCTGCTaGTTGCACTGGTCACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DTGSGGPPGHHCFCPPHPRLAFC*LHWSQK Trigger: CTTCTGTGACCAGTGCAAGCAGCAGAAGGCCAGCCG...GGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | TGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGTGCGCCTTCATGGCCTaGAGAGCAGCCAGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: WRRHLPPPIMRILGNQPWCAFMA*RAASAP Trigger: CGGGGCGCTGGCTGCTCTGCAGGCCATGAAGGCGCA...CCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | CTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTCAGAAGCGGACAAGGTaGGCTGACACCTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLGVVPGLQAGPAGTPACQKRTR*ADTSWS Trigger: GCTCCAGGAGGTGTCAGCCCACCTTGTCCGCTTCTG...ACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | ACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTGGTGCCCGGGTCCAGGATGGGCTTaGAGAAGACTTGGCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TQGACPRSRVINCLEWCPGPGWA*RRLGCG Trigger: CCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACC...CGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | ACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCCTGGCCATCAGTCAGCACTaGCAGAGCATTGAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TGSGGPPGHHCFCPPHPLAISQH*QSIESL Trigger: CAGGCTCTCAATGCTCTGGCAGTGCTGACTGATGGC...CAGGGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | CTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTCAAAATGAGCTCCTCTaGCCCCAGGTCCAGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: LLGVVPGLQAGPAGTPACQNELL*PQVQDG Trigger: CCCATCCTGGACCTGGGGGCAGAGGAGCTCATTTTG...ACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | GGACACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCTTCACGAGGTCCTGGTaGTCATTGCAGTCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GHWQWWATRSSLLLPSPPFTRSW*SLQSAS Trigger: GCTGGCTGACTGCAATGACCACCAGGACCTCGTGAA...GGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| 3UTR CAA 72 bp | CCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTaGGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PSSHHADLGESA*AEAPLPRGPAQ Trigger: TTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | AACTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGGTCCTGGTGGTCATTaGAGTCAGCCAGCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NCLEWCPDCRLALLGHQLGPGGH*SQPAGS Trigger: TGACCCTGCTGGCTGACTGCAATGACCACCAGGACC...AAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | GCTGGCCCTGCTGGGACACCAGCTTGTGGAGGCCTCAAACTCCAGACAGAACACCCAGCCTCCTGTGGATaGGCCTTCATGGCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AGPAGTPACGGLKLQTEHPASCG*AFMACR Trigger: TCTGCAGGCCATGAAGGCGCATCCACAGGAGGCTGG...GTGTTCTGTCTGGAGTTTGAGGCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | CTTGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAAGGAGCGTGCTCATGGGCATaGCCAAAGGGCACTCGGATA | + |
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Preference number: 4 (lower is better) Translates to: LGESALAEAPLPRGPAQGACSWA*PKGTRI Trigger: TATCCGAGTGCCCTTTGGCCATGCCCATGAGCACGC...TCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | TGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGAGGCGTGGATGCGCCTTCATaGCCTGCAGAGCAGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: CPASTLVLWVAWEGGQRGVDAPS*PAEQPA Trigger: CGCTGGCTGCTCTGCAGGCCATGAAGGCGCATCCAC...GCCTCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | TTGGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTCTAGTGGCAGCCAGCTaGCAGGCAGCCAGGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: LAEAPLPRGPAQGAGLSTLVAAS*QAARRI Trigger: AATCCTCCTGGCTGCCTGGCAGCTGGCTGCCACTAG...AGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | TGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGGTGGCCACGAGAAGATaGAAGCCCTGGGCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WRRHLPPPIMRILGNQPWVATRR*KPWASR Trigger: CCTGGATGCCCAGGGCTTGCATCTTCTCGTGGCCAC...CCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | AACTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTCACCTGCCCGGACAATaGCATCCTTTACGTCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: NCLEWCPDCRLALLGHQLHLPGQ*HPLRRR Trigger: ACGACGACGTAAAGGATGCCATTGTCCGGGCAGGTG...AAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CCA 90 bp | ATCATGCGGATCTTGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCAGGGGGCCCCCCAGGTCCAGGATaGGCTTGGAGAAGACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IMRILGNQPWLKHLYPGGPPGPG*AWRRLG Trigger: GCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGG...GCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGAT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR TCA 90 bp | AAGGAGGACAGAGAGGCAGGGCCCCATAGCCACCCACGTTCTGGAGTCAGAGTTCATCATCAAAGGTCATaGCCCGCAAGGCCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KEDREAGPHSHPRSGVRVHHQRS*PARPSR Trigger: CCTGCTGGGCCTTGCGGGTCATGACCTTTGATGATG...AACTCTGACTCCAGAACGTGGGTGGCTATGGGGCCCTGCCTCTCTGTCCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR GCA 90 bp | ACCCAGGGGGCCTGCCCAAGGAGCAGGGTTATCAACTGCTTGGAGTGGTGCCCGGGTTTCGGATCAGCATaGAAGCCTGTTTCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TQGACPRSRVINCLEWCPGFGSA*KPVSGH Trigger: GTGTCCAGAAACAGGCTTGCATGCTGATCCGAAACC...CGGGCACCACTCCAAGCAGTTGATAACCCTGCTCCTTGGGCAGGCCCCCTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGACCACAGCCTCTCGAATaGCCTCCTCAGTGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PCPASTLVLWVAWEGGQRPQPLE*PPQCPS Trigger: AGATGGGCACTGAGGAGGCCATTCGAGAGGCTGTGG...TCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCCTGCTGGGACACCAGCTTGTGGAGGCCTCAAACTCCAGACAGAACACGCATCAAAGGTTTCCTaGGTGATGCGCTTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPAGTPACGGLKLQTEHASKVS*VMRLEA Trigger: GGCTTCCAAGCGCATCACCCAGGAAACCTTTGATGC...GTGTTCTGTCTGGAGTTTGAGGCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGAATCTTGGCGTGCTCATaGGCATGGCCAAAGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PCPASTLVLWVAWEGGQRILACS*AWPKGT Trigger: AGTGCCCTTTGGCCATGCCCATGAGCACGCCAAGAT...TCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| 3UTR CAA 72 bp | TGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTaGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRRHLPPPIMRI*GNQPWLKHLYP Trigger: TGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGACCTGAACAATCATCTTaGCGTGCTCATGGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCPASTLVLWVAWEGGQRPEQSS*RAHGHG Trigger: GCCATGCCCATGAGCACGCCAAGATGATTGTTCAGG...TCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | TGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGATGCAAGCCTGTTTCTaGACACCAGCCTCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRRHLPPPIMRILGNQPWMQACF*TPASCG Trigger: TCCACAGGAGGCTGGTGTCCAGAAACAGGCTTGCAT...CCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | CTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTAGGTCTATAACCTCCTaGCAGAATTCATTCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVVPGLQAGPAGTPACRSITS*QNSFRT Trigger: TGTTCGGAATGAATTCTGCCAGGAGGTTATAGACCT...ACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR GCA 90 bp | ATGTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGGGCTCCCTTCTGGGCTaGCAGGTAGCGGCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MYVCTTAHIQSSEDNLEEGSLLG*QVAAGL Trigger: AAGGCCAGCCGCTACCTGGCAGCCCAGAAGGGAGCC...CTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGACAGAGAGGCAGGGCCCCATAGCCACCCACGTTCTGGAGTCAGAGTTGCTTTCACCAAGTCCTaGCGATTCTGTTCGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEDREAGPHSHPRSGVRVAFTKS*RFCSCF Trigger: AAAGCACGAACAGAATCGGCAGGACTTGGTGAAAGC...AACTCTGACTCCAGAACGTGGGTGGCTATGGGGCCCTGCCTCTCTGTCCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR GCA 90 bp | CTGCAGTTCCATGTGCCCTTTGTCCCAAAGCTGCAGAGAGCAGCTGTGGTAGAATGGAGAAGACTTGGCTaGGGGACACCAGGTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQFHVPFVPKLQRAAVVEWRRLG*GTPGFG Trigger: TCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCA...TTCTACCACAGCTGCTCTCTGCAGCTTTGGGACAAAGGGCACATGGAACTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGAATGTTCTCCCGCACTaGAGCATCAAAGGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEETPPSSHHADLGESALNVLPH*SIKGFL Trigger: CAGGAAACCTTTGATGCTGCAGTGCGGGAGAACATT...CAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCAGAGAGCAGCTGTGGTAGAAGGGACACTGGCAGTGGTGGGCCACCAGTTGTCTTCACAATGTTaGTCAGATCAACCCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLQRAAVVEGTLAVVGHQLSSQC*SDQPLV Trigger: CACAAGGGGTTGATCTGAGCAACATTGTGAAGACAA...CTGGTGGCCCACCACTGCCAGTGTCCCTTCTACCACAGCTGCTCTCTGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | ATGTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGTCCAGGAGGTCAGGCTaGCCATCAGTCAGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MYVCTTAHIQSSEDNLEESRRSG*PSVSTA Trigger: GGCAGTGCTGACTGATGGCCAGCCTGACCTCCTGGA...CTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | ATGTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGAGAAGATGCAAGCCCTaGGCATCCAGGAGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MYVCTTAHIQSSEDNLEERRCKP*ASRRSG Trigger: GCCTGACCTCCTGGATGCCCAGGGCTTGCATCTTCT...CTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR TCA 90 bp | ATGTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGCTCTGGCAGCCTCAATaGGCACCTTCAGGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MYVCTTAHIQSSEDNLEELWQPQ*APSGLC Trigger: ACAAAGGCCTGAAGGTGCTCATTGAGGCTGCCAGAG...CTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CCA 90 bp | GTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACGAAGGACACTATGTGTaGGCTCCTGAAGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVHHSTHTEFRGQFGGDEGHYV*APEGHP Trigger: TGGATGGCCTTCAGGAGCCCACACATAGTGTCCTTC...GTCTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACACCAGATCAACCCCTTGTaGTTCAAACTGCTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MCAPQHTYRVQRTIWRRHQINPL*FKLLHS Trigger: GCTGTGGAGCAGTTTGAATCACAAGGGGTTGATCTG...GTGTCTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR TCA 90 bp | GTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACAGGCCTTTGTTCTCCTaGACAATCATCTTGGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVHHSTHTEFRGQFGGDRPLFS*TIILAC Trigger: GCACGCCAAGATGATTGTTCAGGAGAACAAAGGCCT...GTCTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR GCA 90 bp | ATGTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGACAATCATCTTGGCGTaGTCATGGGCATGGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MYVCTTAHIQSSEDNLEETIILA*SWAWPK Trigger: CTTTGGCCATGCCCATGAGCACGCCAAGATGATTGT...CTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | CGCAAGGCCCAGCAGGCCTCCCTGACCACATCGGCGTGCTGGCCATaGTGTGTAATAGCCGCTGTGAGCAGGGGCAACACGCCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKAQQASLTTSACWP*CVIAAVSRGNTPAF Trigger: GAAAGCTGGCGTGTTGCCCCTGCTCACAGCGGCTATTACACAGCATGGCCAGCACGCCGATGTGGTCAGGGAGGCCTGCTGGGCCTTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | GTCATGACCCGCAAGGCCCAGCAGGCCTCCCTGACCACATCGGCGTaGTGGCCATGCTGTGTAATAGCCGCTGTGAGCAGGGGCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: VMTRKAQQASLTTSA*WPCCVIAAVSRGNT Trigger: CGTGTTGCCCCTGCTCACAGCGGCTATTACACAGCATGGCCAGCACGCCGATGTGGTCAGGGAGGCCTGCTGGGCCTTGCGGGTCATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 90 bp | ATGACCCGCAAGGCCCAGCAGGCCTCCCTGACCACATCGGCGTGCTaGCCATGCTGTGTAATAGCCGCTGTGAGCAGGGGCAACACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MTRKAQQASLTTSAC*PCCVIAAVSRGNTP Trigger: TGGCGTGTTGCCCCTGCTCACAGCGGCTATTACACAGCATGGCCAGCACGCCGATGTGGTCAGGGAGGCCTGCTGGGCCTTGCGGGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CAA 90 bp | GACACTGGCAGTGGTGGGCCACCAGGTCATCACTGCTTCTGCCCTCCCCACCCCCTGGCCTTCTGCTGCTaGCACTGGTCACAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTGSGGPPGHHCFCPPHPLAFCC*HWSQKR Trigger: CCGCTTCTGTGACCAGTGCAAGCAGCAGAAGGCCAG...GGGGTGGGGAGGGCAGAAGCAGTGATGACCTGGTGGCCCACCACTGCCAGTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CAA 90 bp | GGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTGTGGAGGCCTCAGGACCCCTGGGTaGTCAGAGAATGCTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVVPGLQAGPAGTPACGGLRTPG*SENALA Trigger: TGCCAGAGCATTCTCTGACAACCCAGGGGTCCTGAG...GCCTCCACAAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | AGGCTCCCTTCTGGGCTGCCAGGTAGCGGCTGGCCTTCTGCTGCTTaGACTGGTCACAGAAGCGGACAAGGTGGGCTGACACCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLPSGLPGSGWPSAA*TGHRSGQGGLTPPG Trigger: TCCAGGAGGTGTCAGCCCACCTTGTCCGCTTCTGTGACCAGTGCAAGCAGCAGAAGGCCAGCCGCTACCTGGCAGCCCAGAAGGGAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
||
| CDS GCA 90 bp | CAGCTGCCAGGCAGCCAGGAGGATTGGGTAGGCTCCCTTCTGGGCTaGCAGGTAGCGGCTGGCCTTCTGCTGCTTGCACTGGTCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLPGSQEDWVGSLLG*QVAAGLLLLALVTE Trigger: TTCTGTGACCAGTGCAAGCAGCAGAAGGCCAGCCGCTACCTGGCAGCCCAGAAGGGAGCCTACCCAATCCTCCTGGCTGCCTGGCAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 90 bp | CCAGGAGGATTGGGTAGGCTCCCTTCTGGGCTGCCAGGTAGCGGCTaGCCTTCTGCTGCTTGCACTGGTCACAGAAGCGGACAAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGLGRLPSGLPGSG*PSAACTGHRSGQGG Trigger: CCCACCTTGTCCGCTTCTGTGACCAGTGCAAGCAGCAGAAGGCCAGCCGCTACCTGGCAGCCCAGAAGGGAGCCTACCCAATCCTCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
||
| CDS-3UTR CAA 90 bp | AACTGCTTGGAGTGGTGCCCGGATTGCAGGCTGGCCCTGCTGGGACACCAGCTTAGGCAGCCAGGAGGATaGGGTAGGCTCCCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NCLEWCPDCRLALLGHQLRQPGG*GRLPSG Trigger: CCCAGAAGGGAGCCTACCCAATCCTCCTGGCTGCCT...AAGCTGGTGTCCCAGCAGGGCCAGCCTGCAATCCGGGCACCACTCCAAGCAGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGAGGCGAGTGCGGCGCAGCTTaGCTCACACACCTGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPASTLVLWVAWEGGQRGECGAA*LTHLGA Trigger: AGCCCCCAGGTGTGTGAGCAAAGCTGCGCCGCACTC...GCCTCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 90 bp | TGCTTGCACTGGTCACAGAAGCGGACAAGGTGGGCTGACACCTCCTaGAGCCGAGAGCCAGTCAGGGACTCCTGCAGATCGTTAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLHWSQKRTRWADTS*SREPVRDSCRSLRA Trigger: GGCCCTTAACGATCTGCAGGAGTCCCTGACTGGCTCTCGGCTCCAGGAGGTGTCAGCCCACCTTGTCCGCTTCTGTGACCAGTGCAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
||
| CDS CCA 90 bp | TCAGTCAGCACTGCCAGAGCATTGAGAGCCTGGAGCAGAAGACCCTaGTTGCTAGTGGCAGCCAGCTGCCAGGCAGCCAGGAGGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSTARALRAWSRRP*LLVAASCQAARRIG Trigger: CCCAATCCTCCTGGCTGCCTGGCAGCTGGCTGCCACTAGCAACCAGGGTCTTCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCTGACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 90 bp | AGGTCAGGCTGGCCATCAGTCAGCACTGCCAGAGCATTGAGAGCCTaGAGCAGAAGACCCTGGTTGCTAGTGGCAGCCAGCTGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGWPSVSTARALRA*SRRPWLLVAASCQA Trigger: TGCCTGGCAGCTGGCTGCCACTAGCAACCAGGGTCTTCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCTGACTGATGGCCAGCCTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 90 bp | GTGGCCACGAGAAGATGCAAGCCCTGGGCATCCAGGAGGTCAGGCTaGCCATCAGTCAGCACTGCCAGAGCATTGAGAGCCTGGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VATRRCKPWASRRSG*PSVSTARALRAWSR Trigger: TCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCTGACTGATGGCCAGCCTGACCTCCTGGATGCCCAGGGCTTGCATCTTCTCGTGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS TCA 90 bp | CCTAGGTCTCGCAATGCGGCCTTAGCCACATCTTCACAGTCTGGGTaGGCAGCTCGGGCTTGCAAAATGAGCTCCTCTGCCCCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSRNAALATSSQSG*AARACKMSSSAPRS Trigger: GGACCTGGGGGCAGAGGAGCTCATTTTGCAAGCCCGAGCTGCTCACCCAGACTGTGAAGATGTGGCTAAGGCCGCATTGCGAGACCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | AGTTCAGTGTTGGCGGCATTCTGTGCTAGCGTGGCCACGAGAAGATaGAAGCCCTGGGCATCCAGGAGGTCAGGCTGGCCATCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVLAAFCASVATRR*KPWASRRSGWPSVS Trigger: GCTGACTGATGGCCAGCCTGACCTCCTGGATGCCCAGGGCTTGCATCTTCTCGTGGCCACGCTAGCACAGAATGCCGCCAACACTGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | GGCCAGGTGCCGAGTCATAGCAGCCACAATGGACTCCGTACCACCTaGCCGGACAATGGCATCCTTTACGTCGTCGTTGCCTGCGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQVPSHSSHNGLRTT*PDNGILYVVVACDS Trigger: GCTATCGCAGGCAACGACGACGTAAAGGATGCCATTGTCCGGGCAGGTGGTACGGAGTCCATTGTGGCTGCTATGACTCGGCACCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | GCTCCTCTGCCCCCAGGTCCAGGATGGGCTTGGAGAAGACTTGGCTaGGGGACACCAGGTTTCGGATCAGCATGCAAGCCTGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: APLPPGPGWAWRRLG*GTPGFGSACKPVSG Trigger: TCCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGGCAGAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | TTCACAGTCTGGGTGAGCAGCTCGGGCTTGCAAAATGAGCTCCTCTaGCCCCAGGTCCAGGATGGGCTTGGAGAAGACTTGGCTGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FTVWVSSSGLQNELL*PQVQDGLGEDLAAG Trigger: TCCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGGCAGAGGAGCTCATTTTGCAAGCCCGAGCTGCTCACCCAGACTGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CAA 90 bp | CTTGGGGAATCAGCCTTGGCTGAAGCACCTCTACCCAGGGGGCCTGCCCAAGGAAGCACTGCCAGAGCATaGAGAGCCTGGAGCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGESALAEAPLPRGPAQGSTARA*RAWSRR Trigger: TCTTCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCT...TCCTTGGGCAGGCCCCCTGGGTAGAGGTGCTTCAGCCAAGGCTGATTCCCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGAGGCAGGTCCAGGATGGGCTaGGAGAAGACTTGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPASTLVLWVAWEGGQRGRSRMG*EKTWLR Trigger: CCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCT...GCCTCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS TCA 90 bp | CGTGCTTTAGGCAGACATGGCGCACGCAGCGAATCCCACAGCACGTaGGTTCAGTGTTGGCGGCATTCTGTGCTAGCGTGGCCACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RALGRHGARSESHST*VQCWRHSVLAWPRE Trigger: TTCTCGTGGCCACGCTAGCACAGAATGCCGCCAACACTGAACTCACGTGCTGTGGGATTCGCTGCGTGCGCCATGTCTGCCTAAAGCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | AGGGGCAACACGCCAGCTTTCACCAAGTCCTGCCGATTCTGTTCGTaGTTTAGGCAGACATGGCGCACGCAGCGAATCCCACAGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGNTPAFTKSCRFCS*FRQTWRTQRIPQHV Trigger: CACGTGCTGTGGGATTCGCTGCGTGCGCCATGTCTGCCTAAAGCACGAACAGAATCGGCAGGACTTGGTGAAAGCTGGCGTGTTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | ATAGCCGCTGTGAGCAGGGGCAACACGCCAGCTTTCACCAAGTCCTaGCGATTCTGTTCGTGCTTTAGGCAGACATGGCGCACGCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: IAAVSRGNTPAFTKS*RFCSCFRQTWRTQR Trigger: TCGCTGCGTGCGCCATGTCTGCCTAAAGCACGAACAGAATCGGCAGGACTTGGTGAAAGCTGGCGTGTTGCCCCTGCTCACAGCGGCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | CCTCCTGGCAGAATTCATTCCGAACAGCCAGGCGGGATAGGGTGCTaGAGAGTTCGCTCAGGACCCCTGGGTTGTCAGAGAATGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGRIHSEQPGGIGC*RVRSGPLGCQRMLW Trigger: CCAGAGCATTCTCTGACAACCCAGGGGTCCTGAGCGAACTCTGCAGCACCCTATCCCGCCTGGCTGTTCGGAATGAATTCTGCCAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 90 bp | CGTACCACCTGCCCGGACAATGGCATCCTTTACGTCGTCGTTGCCTaGGATAGCCCTCAGGGCACTGAGAACTTGCTTCACGAGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTTCPDNGILYVVVA*DSPQGTENLLHEVL Trigger: CAGGACCTCGTGAAGCAAGTTCTCAGTGCCCTGAGGGCTATCGCAGGCAACGACGACGTAAAGGATGCCATTGTCCGGGCAGGTGGTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 90 bp | ATGAGCTCCTCTGCCCCCAGGTCCAGGATGGGCTTGGAGAAGACTTaGCTGCGGGACACCAGGTTTCGGATCAGCATGCAAGCCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSSAPRSRMGLEKT*LRDTRFRISMQACF Trigger: GAAACAGGCTTGCATGCTGATCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGGCAGAGGAGCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CAA 90 bp | TTGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGAGGTCCTGGTGGTCATaGCAGTCAGCCAGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEETPPSSHHADLGESALRSWWS*QSASRV Trigger: GACCCTGCTGGCTGACTGCAATGACCACCAGGACCT...CAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 90 bp | GCTTGGAGAAGACTTGGCTGCGGGACACCAGGTTTCGGATCAGCATaGAAGCCTGTTTCTGGACACCAGCCTCCTGTGGATGCGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWRRLGCGTPGFGSA*KPVSGHQPPVDAPS Trigger: TGAAGGCGCATCCACAGGAGGCTGGTGTCCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 90 bp | AGCAGGGTCACAAGGATGCCAAGGCCTCCGAGGTCTATAACCTCCTaGCAGAATTCATTCCGAACAGCCAGGCGGGATAGGGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRVTRMPRPPRSITS*QNSFRTARRDRVLQ Trigger: CTGCAGCACCCTATCCCGCCTGGCTGTTCGGAATGAATTCTGCCAGGAGGTTATAGACCTCGGAGGCCTTGGCATCCTTGTGACCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CAA 90 bp | CCCTGCCCTGCTAGCACACTTGTGCTCTGGGTAGCATGGGAAGGAGGACAGAGACACGTGAGTTCAGTGTaGGCGGCATTCTGTGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCPASTLVLWVAWEGGQRHVSSV*AAFCAS Trigger: GCTAGCACAGAATGCCGCCAACACTGAACTCACGTG...TCTCTGTCCTCCTTCCCATGCTACCCAGAGCACAAGTGTGCTAGCAGGGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 90 bp | GCTTTCACCAAGTCCTGCCGATTCTGTTCGTGCTTTAGGCAGACATaGCGCACGCAGCGAATCCCACAGCACGTGAGTTCAGTGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AFTKSCRFCSCFRQT*RTQRIPQHVSSVLA Trigger: CGCCAACACTGAACTCACGTGCTGTGGGATTCGCTGCGTGCGCCATGTCTGCCTAAAGCACGAACAGAATCGGCAGGACTTGGTGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS TCA 90 bp | CGCTCAGGACCCCTGGGTTGTCAGAGAATGCTCTGGCAGCCTCAATaGGCACCTTCAGGCCTTTGTTCTCCTGAACAATCATCTTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RSGPLGCQRMLWQPQ*APSGLCSPEQSSWR Trigger: ACGCCAAGATGATTGTTCAGGAGAACAAAGGCCTGAAGGTGCTCATTGAGGCTGCCAGAGCATTCTCTGACAACCCAGGGGTCCTGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS TCA 90 bp | AATGCTCTGGCAGCCTCAATGAGCACCTTCAGGCCTTTGTTCTCCTaGACAATCATCTTGGCGTGCTCATGGGCATGGCCAAAGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NALAASMSTFRPLFS*TIILACSWAWPKGT Trigger: AGTGCCCTTTGGCCATGCCCATGAGCACGCCAAGATGATTGTTCAGGAGAACAAAGGCCTGAAGGTGCTCATTGAGGCTGCCAGAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS-3UTR CAA 90 bp | ATGTATGTGTGCACCACAGCACACATACAGAGTTCAGAGGACAATTTGGAGGAGGGGCTTGGAGAAGACTaGGCTGCGGGACACCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MYVCTTAHIQSSEDNLEEGLGED*AAGHQV Trigger: AACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGCCC...CTCCTCCAAATTGTCCTCTGAACTCTGTATGTGTGCTGTGGTGCACACATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGATTGTCTTCACAATGTaGCTCAGATCAACCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LEETPPSSHHADLGESALIVFTM*LRSTPC Trigger: ACAAGGGGTTGATCTGAGCAACATTGTGAAGACAAT...CAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS TCA 90 bp | AAGGGCCTGAAGGACACTATGTGTGGGCTCCTGAAGGCCATCCAGTaGTACTTTCGGTATTGTCTTCACAATGTTGCTCAGATCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: KGLKDTMCGLLKAIQ*YFRYCLHNVAQINP Trigger: GGGGTTGATCTGAGCAACATTGTGAAGACAATACCGAAAGTATCACTGGATGGCCTTCAGGAGCCCACACATAGTGTCCTTCAGGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGGAGACACCTCCCTCCTCCCATCATGCGGATCTTGGGGAATCAGCCTTGGTGATACTTTCGGTATaGTCTTCACAATGTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEETPPSSHHADLGESALVILSV*SSQCCS Trigger: TGAGCAACATTGTGAAGACAATACCGAAAGTATCAC...CAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCTCCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 72 bp | TTGCGAAGAGCTAGGACGCAGAGTGCGGCGCAGCTTTaGTCACACACCTGGGGGCTGGCCAGGTGCCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRRARTQSAAQL*SHTWGLARCRV Trigger: GACTCGGCACCTGGCCAGCCCCCAGGTGTGTGAGCAAAGCTGCGCCGCACTCTGCGTCCTAGCTCTTCGCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | GCCAGCGCCCCGCCGCCCTCAATAATGACCCGGCTGTTGTCTGGCTaGCGAAGAGCTAGGACGCAGAGTGCGGCGCAGCTTTGCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: ASAPPPSIMTRLLSG*RRARTQSAAQLCSH Trigger: GTGTGAGCAAAGCTGCGCCGCACTCTGCGTCCTAGCTCTTCGCAAGCCAGACAACAGCCGGGTCATTATTGAGGGCGGCGGGGCGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CAA 90 bp | TGCAGAGCAGCCAGCGCCCCGCCGCCCTCAATAATGACCCGGCTGTaGTCTGGCTTGCGAAGAGCTAGGACGCAGAGTGCGGCGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CRAASAPPPSIMTRL*SGLRRARTQSAAQL Trigger: AAGCTGCGCCGCACTCTGCGTCCTAGCTCTTCGCAAGCCAGACAACAGCCGGGTCATTATTGAGGGCGGCGGGGCGCTGGCTGCTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | CAGCAGGCCTCCCTGACCACATCGGCGTGCTGGCCATaGTGTGTAATAGCCGCTGTGAGCAGGGGCAACACG | + |
|
Preference number: 6 (lower is better) Translates to: QQASLTTSACWP*CVIAAVSRGNT Trigger: CGTGTTGCCCCTGCTCACAGCGGCTATTACACAGCATGGCCAGCACGCCGATGTGGTCAGGGAGGCCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | TTGGCGGCATTCTGTGCTAGCGTGGCCACGAGAAGATaGAAGCCCTGGGCATCCAGGAGGTCAGGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LAAFCASVATRR*KPWASRRSGWP Trigger: TGGCCAGCCTGACCTCCTGGATGCCCAGGGCTTGCATCTTCTCGTGGCCACGCTAGCACAGAATGCCGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 72 bp | TGGTCACAGAAGCGGACAAGGTGGGCTGACACCTCCTaGAGCCGAGAGCCAGTCAGGGACTCCTGCAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: WSQKRTRWADTS*SREPVRDSCRS Trigger: CGATCTGCAGGAGTCCCTGACTGGCTCTCGGCTCCAGGAGGTGTCAGCCCACCTTGTCCGCTTCTGTGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS CCA 72 bp | TTGGGTAGGCTCCCTTCTGGGCTGCCAGGTAGCGGCTaGCCTTCTGCTGCTTGCACTGGTCACAGAAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGRLPSGLPGSG*PSAACTGHRSG Trigger: TCCGCTTCTGTGACCAGTGCAAGCAGCAGAAGGCCAGCCGCTACCTGGCAGCCCAGAAGGGAGCCTACCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS CCA 72 bp | CAGCATGCAAGCCTGTTTCTGGACACCAGCCTCCTGTaGATGCGCCTTCATGGCCTGCAGAGCAGCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QHASLFLDTSLL*MRLHGLQSSQR Trigger: GCGCTGGCTGCTCTGCAGGCCATGAAGGCGCATCCACAGGAGGCTGGTGTCCAGAAACAGGCTTGCATGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CAA 72 bp | CCGCCGCCCTCAATAATGACCCGGCTGTTGTCTGGCTaGCGAAGAGCTAGGACGCAGAGTGCGGCGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPPSIMTRLLSG*RRARTQSAAQL Trigger: AAGCTGCGCCGCACTCTGCGTCCTAGCTCTTCGCAAGCCAGACAACAGCCGGGTCATTATTGAGGGCGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | GCATCCAGGAGGTCAGGCTGGCCATCAGTCAGCACTGCCAGAGCATaGAGAGCCTGGAGCAGAAGACCCTGGTTGCTAGTGGCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRRSGWPSVSTARA*RAWSRRPWLLVAAS Trigger: GCTGGCTGCCACTAGCAACCAGGGTCTTCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCTGACTGATGGCCAGCCTGACCTCCTGGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | GCCAGGCGGGATAGGGTGCTGCAGAGTTCGCTCAGGACCCCTGGGTaGTCAGAGAATGCTCTGGCAGCCTCAATGAGCACCTTCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARRDRVLQSSLRTPG*SENALAASMSTFRP Trigger: AGGCCTGAAGGTGCTCATTGAGGCTGCCAGAGCATTCTCTGACAACCCAGGGGTCCTGAGCGAACTCTGCAGCACCCTATCCCGCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | GCCCTCAGGGCACTGAGAACTTGCTTCACGAGGTCCTGGTGGTCATaGCAGTCAGCCAGCAGGGTCACAAGGATGCCAAGGCCTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRALRTCFTRSWWS*QSASRVTRMPRPPR Trigger: CCTCGGAGGCCTTGGCATCCTTGTGACCCTGCTGGCTGACTGCAATGACCACCAGGACCTCGTGAAGCAAGTTCTCAGTGCCCTGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS TCA 72 bp | GGCAGACATGGCGCACGCAGCGAATCCCACAGCACGTaGGTTCAGTGTTGGCGGCATTCTGTGCTAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRHGARSESHST*VQCWRHSVLAW Trigger: CCACGCTAGCACAGAATGCCGCCAACACTGAACTCACGTGCTGTGGGATTCGCTGCGTGCGCCATGTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | CAGACATGGCGCACGCAGCGAATCCCACAGCACGTGAGTTCAGTGTaGGCGGCATTCTGTGCTAGCGTGGCCACGAGAAGATGCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QTWRTQRIPQHVSSV*AAFCASVATRRCKP Trigger: GGGCTTGCATCTTCTCGTGGCCACGCTAGCACAGAATGCCGCCAACACTGAACTCACGTGCTGTGGGATTCGCTGCGTGCGCCATGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | CGGGCTTGCAAAATGAGCTCCTCTGCCCCCAGGTCCAGGATGGGCTaGGAGAAGACTTGGCTGCGGGACACCAGGTTTCGGATCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RACKMSSSAPRSRMG*EKTWLRDTRFRISM Trigger: CATGCTGATCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGGCAGAGGAGCTCATTTTGCAAGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | TGCGGCCTTAGCCACATCTTCACAGTCTGGGTGAGCAGCTCGGGCTaGCAAAATGAGCTCCTCTGCCCCCAGGTCCAGGATGGGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGLSHIFTVWVSSSG*QNELLCPQVQDGLG Trigger: TCCAAGCCCATCCTGGACCTGGGGGCAGAGGAGCTCATTTTGCAAGCCCGAGCTGCTCACCCAGACTGTGAAGATGTGGCTAAGGCCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 72 bp | TGGCCATCAGTCAGCACTGCCAGAGCATTGAGAGCCTaGAGCAGAAGACCCTGGTTGCTAGTGGCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPSVSTARALRA*SRRPWLLVAAS Trigger: GCTGGCTGCCACTAGCAACCAGGGTCTTCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCTGACTGATGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 72 bp | GCCCTCAGGGCACTGAGAACTTGCTTCACGAGGTCCTaGTGGTCATTGCAGTCAGCCAGCAGGGTCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRALRTCFTRS*WSLQSASRVTR Trigger: CCTTGTGACCCTGCTGGCTGACTGCAATGACCACCAGGACCTCGTGAAGCAAGTTCTCAGTGCCCTGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CCA 72 bp | TCTGCCCCCAGGTCCAGGATGGGCTTGGAGAAGACTTaGCTGCGGGACACCAGGTTTCGGATCAGCATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SAPRSRMGLEKT*LRDTRFRISMQ Trigger: TTGCATGCTGATCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 72 bp | CGCACGCAGCGAATCCCACAGCACGTGAGTTCAGTGTaGGCGGCATTCTGTGCTAGCGTGGCCACGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTQRIPQHVSSV*AAFCASVATRR Trigger: TCTTCTCGTGGCCACGCTAGCACAGAATGCCGCCAACACTGAACTCACGTGCTGTGGGATTCGCTGCGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 72 bp | CCACCTGCCCGGACAATGGCATCCTTTACGTCGTCGTaGCCTGCGATAGCCCTCAGGGCACTGAGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPARTMASFTSS*PAIALRALRTC Trigger: GCAAGTTCTCAGTGCCCTGAGGGCTATCGCAGGCAACGACGACGTAAAGGATGCCATTGTCCGGGCAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | GACTCCGTACCACCTGCCCGGACAATGGCATCCTTTACGTCGTCGTaGCCTGCGATAGCCCTCAGGGCACTGAGAACTTGCTTCACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSVPPARTMASFTSS*PAIALRALRTCFTR Trigger: CCTCGTGAAGCAAGTTCTCAGTGCCCTGAGGGCTATCGCAGGCAACGACGACGTAAAGGATGCCATTGTCCGGGCAGGTGGTACGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 90 bp | AATGAGCTCCTCTGCCCCCAGGTCCAGGATGGGCTTGGAGAAGACTaGGCTGCGGGACACCAGGTTTCGGATCAGCATGCAAGCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NELLCPQVQDGLGED*AAGHQVSDQHASLF Trigger: AAACAGGCTTGCATGCTGATCCGAAACCTGGTGTCCCGCAGCCAAGTCTTCTCCAAGCCCATCCTGGACCTGGGGGCAGAGGAGCTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | GTGAGCAGGGGCAACACGCCAGCTTTCACCAAGTCCTaGCGATTCTGTTCGTGCTTTAGGCAGACATGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRGNTPAFTKS*RFCSCFRQTWR Trigger: GCGCCATGTCTGCCTAAAGCACGAACAGAATCGGCAGGACTTGGTGAAAGCTGGCGTGTTGCCCCTGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | TCGTTGCCTGCGATAGCCCTCAGGGCACTGAGAACTTaGTTCACGAGGTCCTGGTGGTCATTGCAGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPAIALRALRT*FTRSWWSLQSA Trigger: GGCTGACTGCAATGACCACCAGGACCTCGTGAAGCAAGTTCTCAGTGCCCTGAGGGCTATCGCAGGCAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 72 bp | AGGTCAGGCTGGCCATCAGTCAGCACTGCCAGAGCATaGAGAGCCTGGAGCAGAAGACCCTGGTTGCTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSGWPSVSTARA*RAWSRRPWLLV Trigger: CACTAGCAACCAGGGTCTTCTGCTCCAGGCTCTCAATGCTCTGGCAGTGCTGACTGATGGCCAGCCTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 72 bp | GTCGTTGCCTGCGATAGCCCTCAGGGCACTGAGAACTaGCTTCACGAGGTCCTGGTGGTCATTGCAGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VVACDSPQGTEN*LHEVLVVIAVS Trigger: GCTGACTGCAATGACCACCAGGACCTCGTGAAGCAAGTTCTCAGTGCCCTGAGGGCTATCGCAGGCAACGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS CAA 72 bp | AGCCACATCTTCACAGTCTGGGTGAGCAGCTCGGGCTaGCAAAATGAGCTCCTCTGCCCCCAGGTCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SHIFTVWVSSSG*QNELLCPQVQD Trigger: ATCCTGGACCTGGGGGCAGAGGAGCTCATTTTGCAAGCCCGAGCTGCTCACCCAGACTGTGAAGATGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | ACGCCAGCTTTCACCAAGTCCTGCCGATTCTGTTCGTaGTTTAGGCAGACATGGCGCACGCAGCGAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPAFTKSCRFCS*FRQTWRTQRIP Trigger: TGGGATTCGCTGCGTGCGCCATGTCTGCCTAAAGCACGAACAGAATCGGCAGGACTTGGTGAAAGCTGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | GCAGAGTTCGCTCAGGACCCCTGGGTTGTCAGAGAATaGTCTGGCAGCCTCAATGAGCACCTTCAGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AEFAQDPWVVRE*SGSLNEHLQAF Trigger: AAAGGCCTGAAGGTGCTCATTGAGGCTGCCAGAGCATTCTCTGACAACCCAGGGGTCCTGAGCGAACTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | AGAATTCATTCCGAACAGCCAGGCGGGATAGGGTGCTaGAGAGTTCGCTCAGGACCCCTGGGTTGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RIHSEQPGGIGC*RVRSGPLGCQR Trigger: TCTCTGACAACCCAGGGGTCCTGAGCGAACTCTGCAGCACCCTATCCCGCCTGGCTGTTCGGAATGAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
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| CDS GCA 72 bp | TGCCCGGACAATGGCATCCTTTACGTCGTCGTTGCCTaGGATAGCCCTCAGGGCACTGAGAACTTGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CPDNGILYVVVA*DSPQGTENLLH Trigger: GTGAAGCAAGTTCTCAGTGCCCTGAGGGCTATCGCAGGCAACGACGACGTAAAGGATGCCATTGTCCGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 72 bp | AAGTCCTGCCGATTCTGTTCGTGCTTTAGGCAGACATaGCGCACGCAGCGAATCCCACAGCACGTGAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KSCRFCSCFRQT*RTQRIPQHVSS Trigger: TGAACTCACGTGCTGTGGGATTCGCTGCGTGCGCCATGTCTGCCTAAAGCACGAACAGAATCGGCAGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS CCA 72 bp | ACAAGGATGCCAAGGCCTCCGAGGTCTATAACCTCCTaGCAGAATTCATTCCGAACAGCCAGGCGGGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRMPRPPRSITS*QNSFRTARRDR Trigger: CCTATCCCGCCTGGCTGTTCGGAATGAATTCTGCCAGGAGGTTATAGACCTCGGAGGCCTTGGCATCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS TCA 72 bp | GCAGCCTCAATGAGCACCTTCAGGCCTTTGTTCTCCTaGACAATCATCTTGGCGTGCTCATGGGCATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AASMSTFRPLFS*TIILACSWAWP Trigger: TGGCCATGCCCATGAGCACGCCAAGATGATTGTTCAGGAGAACAAAGGCCTGAAGGTGCTCATTGAGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019679.12 |
||
| CDS GCA 72 bp | AGTGCCCATCTCAAACTCCTCAATGTTCTCCCGCACTaGAGCATCAAAGGTTTCCTGGGTGATGCGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAHLKLLNVLPH*SIKGFLGDALG Trigger: TCCAAGCGCATCACCCAGGAAACCTTTGATGCTGCAGTGCGGGAGAACATTGAGGAGTTTGAGATGGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
||
| CDS GCA 72 bp | ACAATGTTGCTCAGATCAACCCCTTGTGATTCAAACTaGTCCACAGCCTCTCGAATGGCCTCCTCAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TMLLRSTPCDSN*STASRMASSVP Trigger: GGGCACTGAGGAGGCCATTCGAGAGGCTGTGGAGCAGTTTGAATCACAAGGGGTTGATCTGAGCAACATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS CAA 72 bp | TGGGCTCCTGAAGGCCATCCAGTGATACTTTCGGTATaGTCTTCACAATGTTGCTCAGATCAACCCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: WAPEGHPVILSV*SSQCCSDQPLV Trigger: CACAAGGGGTTGATCTGAGCAACATTGTGAAGACAATACCGAAAGTATCACTGGATGGCCTTCAGGAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS TCA 72 bp | AAGGACACTATGTGTGGGCTCCTGAAGGCCATCCAGTaGTACTTTCGGTATTGTCTTCACAATGTTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KDTMCGLLKAIQ*YFRYCLHNVAQ Trigger: CTGAGCAACATTGTGAAGACAATACCGAAAGTATCACTGGATGGCCTTCAGGAGCCCACACATAGTGTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS CAA 90 bp | CACTATGTGTGGGCTCCTGAAGGCCATCCAGTGATACTTTCGGTATaGTCTTCACAATGTTGCTCAGATCAACCCCTTGTGATTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: HYVWAPEGHPVILSV*SSQCCSDQPLVIQT Trigger: AGTTTGAATCACAAGGGGTTGATCTGAGCAACATTGTGAAGACAATACCGAAAGTATCACTGGATGGCCTTCAGGAGCCCACACATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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| CDS CAA 72 bp | CCATCCAGTGATACTTTCGGTATTGTCTTCACAATGTaGCTCAGATCAACCCCTTGTGATTCAAACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSSDTFGIVFTM*LRSTPCDSNCS Trigger: GGAGCAGTTTGAATCACAAGGGGTTGATCTGAGCAACATTGTGAAGACAATACCGAAAGTATCACTGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019679.12 ENSMUST00000130319.2 |
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