Pregenerated sensors for ARMC12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024223Ensembl transcript IDs: ENSMUST00000025060.4, ENSMUST00000233114.2, ENSMUST00000233837.2, ENSMUST00000233923.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCGCCGCAGCTGTGGGTGCACATAGTCAGGTAGCGGGAGGTTGTTaGGCAATCGGAGACCAGCTACGTGCAATTCCAAGTCCCAGATGG | + |
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Preference number: 1 (lower is better) Translates to: PAAAVGAHSQVAGGC*AIGDQLRAIPSPRW Trigger: CCATCTGGGACTTGGAATTGCACGTAGCTGGTCTCCGATTGCTCAACAACCTCCCGCTACCTGACTATGTGCACCCACAGCTGCGGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR GCA 90 bp | CTGAACTTCCTCCTCAGGGTGGATGACCAGGGAGAGCAGTCGGTCTaGCAGTCTGGACTCATCCCCAAAGAGGGCTTCGTGCAGGGATTG | + |
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Preference number: 1 (lower is better) Translates to: LNFLLRVDDQGEQSV*QSGLIPKEGFVQGL Trigger: CAATCCCTGCACGAAGCCCTCTTTGGGGATGAGTCCAGACTGGCAGACCGACTGCTCTCCCTGGTCATCCACCCTGAGGAGGAAGTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 90 bp | GTGTTCCGCAAACACCAGCACCTCGAACAGCAGACTGCCCGGCTGTaGAGACTGGAAGAGGTTCAGGAAGTTGGGACGCACCTGACAGTT | + |
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Preference number: 1 (lower is better) Translates to: VFRKHQHLEQQTARL*RLEEVQEVGTHLTV Trigger: AACTGTCAGGTGCGTCCCAACTTCCTGAACCTCTTCCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGGTGCTGGTGTTTGCGGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 90 bp | CCCCAAAGAGGGCTTCGTGCAGGGATTGCTCGTTGTAATGCCATTTaGCCGCTCGGTAGTGGGTGGCGTTCCGACCTTCACTCAAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: PQRGLRAGIARCNAI*PLGSGWRSDLHSSV Trigger: AACACTTGAGTGAAGGTCGGAACGCCACCCACTACCGAGCGGTCAAATGGCATTACAACGAGCAATCCCTGCACGAAGCCCTCTTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR GCA 90 bp | CTTCACTCAAGTGTTCCGCAAACACCAGCACCTCGAACAGCAGACTaGCCGGCTGTGAAGACTGGAAGAGGTTCAGGAAGTTGGGACGCA | + |
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Preference number: 1 (lower is better) Translates to: LHSSVPQTPAPRTAD*PAVKTGRGSGSWDA Trigger: TGCGTCCCAACTTCCTGAACCTCTTCCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGGTGCTGGTGTTTGCGGAACACTTGAGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 90 bp | GTGAAGACTGGAAGAGGTTCAGGAAGTTGGGACGCACCTGACAGTTaGGAATGTCATAAAGAAGGTCGTTCTTCTGTGCCAGGTAACTCA | + |
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Preference number: 1 (lower is better) Translates to: VKTGRGSGSWDAPDS*ECHKEGRSSVPGNS Trigger: TGAGTTACCTGGCACAGAAGAACGACCTTCTTTATGACATTCTCAACTGTCAGGTGCGTCCCAACTTCCTGAACCTCTTCCAGTCTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR CAA 90 bp | GTCTGCCAGTCTGGACTCATCCCCAAAGAGGGCTTCGTGCAGGGATaGCTCGTTGTAATGCCATTTGACCGCTCGGTAGTGGGTGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: VCQSGLIPKEGFVQG*LVVMPFDRSVVGGV Trigger: AACGCCACCCACTACCGAGCGGTCAAATGGCATTACAACGAGCAATCCCTGCACGAAGCCCTCTTTGGGGATGAGTCCAGACTGGCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTGGATGACCAGGGAGAGCAGTCGGTCTGCCAGTCTGGACTCATCCCCAAAAAGGTCGTTCTTCTGTaGCAGGTAACTCAGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: RVDDQGEQSVCQSGLIPKKVVLL*QVTQEA Trigger: CGCCTCCTGAGTTACCTGGCACAGAAGAACGACCTT...TTTGGGGATGAGTCCAGACTGGCAGACCGACTGCTCTCCCTGGTCATCCACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTGGATCTCCTTAACTTCGGAGAGCAGTCGGTCTaGCAGTCTGGACTCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: SGGLELPSRTHLLDLLNFGEQSV*QSGLIP Trigger: GGGGATGAGTCCAGACTGGCAGACCGACTGCTCTCC...GAAGTTAAGGAGATCCAATAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACTGCCCGGCTGTGAAGACTGGAAGAGGTTCAGGAAGTTGGGACGCACCTTGCCAGGATGCAGTCTaGCTGTATGATCTCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: ADCPAVKTGRGSGSWDAPCQDAV*LYDLHQ Trigger: CTGATGGAGATCATACAGTCAGACTGCATCCTGGCA...AGGTGCGTCCCAACTTCCTGAACCTCTTCCAGTCTTCACAGCCGGGCAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCGAACAGCAGACTGCCCGGCTGTGAAGACTGGAAGAGGTTCAGGAAGGAAGTGGGATGTGTTTaGGTGCTGTTCCACGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: STSNSRLPGCEDWKRFRKEVGCV*VLFHGL Trigger: TAGGCCGTGGAACAGCACCCAAACACATCCCACTTC...CTTCCTGAACCTCTTCCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR GCA 90 bp | AACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTAAGAGAAAGCTTTAAGTaGATTCAGAGCTTGGATTTT | + |
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Preference number: 2 (lower is better) Translates to: NGQTLASGGLELPSRTHLRESFK*IQSLDF Trigger: AAAATCCAAGCTCTGAATGCACTTAAAGCTTTCTCT...TAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR GCA 72 bp | CTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTaGTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCA | + |
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Preference number: 3 (lower is better) Translates to: LHPGPGRQRTDA*FRRPRASLPYA Trigger: TGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| 3UTR GCA 72 bp | CTCCTCAGGGTGGATGACCAGGGAGAGCAGTCGGTCTaGCAGTCTGGACTCATCCCCAAAGAGGGCTTCGTG | + |
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Preference number: 3 (lower is better) Translates to: LLRVDDQGEQSV*QSGLIPKEGFV Trigger: CACGAAGCCCTCTTTGGGGATGAGTCCAGACTGGCAGACCGACTGCTCTCCCTGGTCATCCACCCTGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 72 bp | TGCAGGCCTGGATCTGAACTTCCTCCTCAGGGTGGATaGCCAGGGAGAGCAGTCGGTCTGCCAGTCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: CRPGSELPPQGG*PGRAVGLPVWT Trigger: AGTCCAGACTGGCAGACCGACTGCTCTCCCTGGTCATCCACCCTGAGGAGGAAGTTCAGATCCAGGCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR CCA 72 bp | AGGGGCAGTCTCCCAAACACAGAAGTGGGATGTGTTTaGGTGCTGTTCCACGGCCTAGGGGGAGGCCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: RGSLPNTEVGCV*VLFHGLGGGPD Trigger: ATCAGGGCCTCCCCCTAGGCCGTGGAACAGCACCCAAACACATCCCACTTCTGTGTTTGGGAGACTGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| 3UTR-3UTR CAA 90 bp | AACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTAAGAAGTGGGATGTGTTaGGGTGCTGTTCCACGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NGQTLASGGLELPSRTHLRSGMC*GAVPRP Trigger: AGGCCGTGGAACAGCACCCAAACACATCCCACTTCT...TAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| 3UTR TCA 72 bp | GAGGCGGACAGCTTGTACCTGTGCCAGGATGCAGTCTaGCTGTATGATCTCCATCAGGGCAGGCATCACCCG | + |
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Preference number: 3 (lower is better) Translates to: EADSLYLCQDAV*LYDLHQGRHHP Trigger: CGGGTGATGCCTGCCCTGATGGAGATCATACAGTCAGACTGCATCCTGGCACAGGTACAAGCTGTCCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 72 bp | GGGCTTCGTGCAGGGATTGCTCGTTGTAATGCCATTTaGCCGCTCGGTAGTGGGTGGCGTTCCGACCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: GLRAGIARCNAI*PLGSGWRSDLH Trigger: GTGAAGGTCGGAACGCCACCCACTACCGAGCGGTCAAATGGCATTACAACGAGCAATCCCTGCACGAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGGCGTTCCGACCTTCACTCAAGTGTTCCGCAAACACCAGCACCTCGAACAGAAGTGGGATGTGTTaGGGTGCTGTTCCACGGCCT | + |
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Preference number: 3 (lower is better) Translates to: WVAFRPSLKCSANTSTSNRSGMC*GAVPRP Trigger: AGGCCGTGGAACAGCACCCAAACACATCCCACTTCT...GTTCGAGGTGCTGGTGTTTGCGGAACACTTGAGTGAAGGTCGGAACGCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR GCA 72 bp | AGTGTTCCGCAAACACCAGCACCTCGAACAGCAGACTaGCCGGCTGTGAAGACTGGAAGAGGTTCAGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: SVPQTPAPRTAD*PAVKTGRGSGS Trigger: ACTTCCTGAACCTCTTCCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGGTGCTGGTGTTTGCGGAACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 72 bp | GCTGTGGGTGCACATAGTCAGGTAGCGGGAGGTTGTTaGGCAATCGGAGACCAGCTACGTGCAATTCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: AVGAHSQVAGGC*AIGDQLRAIPS Trigger: ACTTGGAATTGCACGTAGCTGGTCTCCGATTGCTCAACAACCTCCCGCTACCTGACTATGTGCACCCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR CCA 72 bp | CCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTaGATCTCCTTAACTTCACTTCCCGGTTTTAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PEASSFPPVRIY*ISLTSLPGFKA Trigger: TGCTTTAAAACCGGGAAGTGAAGTTAAGGAGATCCAATAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR TCA 72 bp | GGAAGAGGTTCAGGAAGTTGGGACGCACCTGACAGTTaGGAATGTCATAAAGAAGGTCGTTCTTCTGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: GRGSGSWDAPDS*ECHKEGRSSVP Trigger: TGGCACAGAAGAACGACCTTCTTTATGACATTCTCAACTGTCAGGTGCGTCCCAACTTCCTGAACCTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR GCA 72 bp | ACAGTTGAGAATGTCATAAAGAAGGTCGTTCTTCTGTaGCAGGTAACTCAGGAGGCGGACAGCTTGTACCTG | + |
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Preference number: 3 (lower is better) Translates to: TVENVIKKVVLL*QVTQEADSLYL Trigger: CAGGTACAAGCTGTCCGCCTCCTGAGTTACCTGGCACAGAAGAACGACCTTCTTTATGACATTCTCAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAATGTCATAAAGAAGGTCGTTCTTCTGTGCCAGGTAACTCAGGAGGCGGACAAGTGCATTCAGAGCTaGGATTTTTACACTGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: ENVIKKVVLLCQVTQEADKCIQS*DFYTVV Trigger: GACAACAGTGTAAAAATCCAAGCTCTGAATGCACTT...GTCCGCCTCCTGAGTTACCTGGCACAGAAGAACGACCTTCTTTATGACATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR CAA 72 bp | CCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTaGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGC | + |
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Preference number: 4 (lower is better) Translates to: PPPRSWEATDRR*LPEASSFPPVR Trigger: GCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCCCTCCTCAGGGTGGATaGCCAGGGAGAGCAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: EATDRRLLPEASSFPPVRPPQGG*PGRAVG Trigger: ACCGACTGCTCTCCCTGGTCATCCACCCTGAGGAGG...GCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCCCTCGAACAGCAGACTaGCCGGCTGTGAAGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: EATDRRLLPEASSFPPVRPRTAD*PAVKTG Trigger: TCCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGG...GCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACCGTTGTAATGCCATTTaGCCGCTCGGTAGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRQRTDACFRRPRASLPYRCNAI*PLGSGW Trigger: CCACCCACTACCGAGCGGTCAAATGGCATTACAACG...GTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | GCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTGGATCTCCTTAACCCGGAGTCCCGCCCGTaGCGCTCTCTCTCGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: ASGGLELPSRTHLLDLLNPESRP*RSLSMA Trigger: GGCCATCGAGAGAGAGCGCCACGGGCGGGACTCCGG...GTTAAGGAGATCCAATAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR GCA 90 bp | GGGAGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACTTGATGAGGTCCAGTTaGTCCAGGAACCGGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: GRQRTDACFRRPRASLPYLMRSS*SRNRGM Trigger: CATTCCCCGGTTCCTGGAGCAACTGGACCTCATCAA...GTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCAAGGTCGTTCTTCTGTaGCAGGTAACTCAGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: EATDRRLLPEASSFPPVRKVVLL*QVTQEA Trigger: CGCCTCCTGAGTTACCTGGCACAGAAGAACGACCTT...GCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | CCTGATGAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTGCAGATCGGCGAGTTaGAGCAGAGTGGCGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: PDEQHLHPGPGRQRTDACCRSAS*SRVADD Trigger: GTCATCCGCCACTCTGCTCCAACTCGCCGATCTGCA...GCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTCATCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTAGCGGGAGGTTGTTGAGCAATCGGAGACCAGCTACGTGCAATTCCAAGCCGGAGTCCCGCCCGTaGCGCTCTCTCTCGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGSGRLLSNRRPATCNSKPESRP*RSLSMA Trigger: GGCCATCGAGAGAGAGCGCCACGGGCGGGACTCCGG...CTTGGAATTGCACGTAGCTGGTCTCCGATTGCTCAACAACCTCCCGCTACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS-3UTR GCA 90 bp | CGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTGGAGAGCAGTCGGTCTaGCAGTCTGGACTCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: RTDACFRRPRASLPYAFIGEQSV*QSGLIP Trigger: GGGGATGAGTCCAGACTGGCAGACCGACTGCTCTCC...AATAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR TCA 90 bp | TGGGTGCTGTTCCACGGCCTAGGGGGAGGCCCTGATGAACAGCACCTCCACCCATGCCAGGATGCAGTCTaGCTGTATGATCTCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: WVLFHGLGGGPDEQHLHPCQDAV*LYDLHQ Trigger: CTGATGGAGATCATACAGTCAGACTGCATCCTGGCA...TGGGTGGAGGTGCTGTTCATCAGGGCCTCCCCCTAGGCCGTGGAACAGCACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR TCA 90 bp | ATGAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTTCCACTGCAAGCTCACTATaGCTTTGCAGGCCTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: MNSTSTQVLGGNGQTLASTASSL*LCRPGS Trigger: AGATCCAGGCCTGCAAAGTCATAGTGAGCTTGCAGT...GGAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR GCA 90 bp | AACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTGATGAGGTCCAGTTaGTCCAGGAACCGGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: NGQTLASGGLELPSRTHLLMRSS*SRNRGM Trigger: CATTCCCCGGTTCCTGGAGCAACTGGACCTCATCAA...TAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | GCTTGTACCTGTGCCAGGATGCAGTCTGACTGTATGATCTCCATCAGGGCAGGCTGCAGATCGGCGAGTTaGAGCAGAGTGGCGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: ACTCARMQSDCMISIRAGCRSAS*SRVADD Trigger: GTCATCCGCCACTCTGCTCCAACTCGCCGATCTGCA...GCCTGCCCTGATGGAGATCATACAGTCAGACTGCATCCTGGCACAGGTACAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS-3UTR CCA 90 bp | AGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCAGAAGGATCATGCTCCTaGTATACTCATCCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: RQRTDACFRRPRASLPYAEGSCS*YTHPVC Trigger: GCAAACAGGATGAGTATACCAGGAGCATGATCCTTC...TGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | TTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTGGATCTCCTTAGTCGGTCTGCCAGTCTaGACTCATCCCCAAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLPEASSFPPVRIYWISLVGLPV*THPQRG Trigger: CCCTCTTTGGGGATGAGTCCAGACTGGCAGACCGAC...TAAGGAGATCCAATAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | GAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTTCCGGAGTGCATTCAGAGCTTaGATTTTTACACTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EQHLHPGPGRQRTDACFRSAFRA*IFTLLS Trigger: GGACAACAGTGTAAAAATCCAAGCTCTGAATGCACT...CCGGAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| 3UTR CAA 72 bp | TCTGGACTCATCCCCAAAGAGGGCTTCGTGCAGGGATaGCTCGTTGTAATGCCATTTGACCGCTCGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SGLIPKEGFVQG*LVVMPFDRSVV Trigger: CACTACCGAGCGGTCAAATGGCATTACAACGAGCAATCCCTGCACGAAGCCCTCTTTGGGGATGAGTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS-3UTR CCA 90 bp | TTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTATTGGATCTCCTTACCCGGCTGTGAAGACTaGAAGAGGTTCAGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLPEASSFPPVRIYWISLPGCED*KRFRKL Trigger: CAACTTCCTGAACCTCTTCCAGTCTTCACAGCCGGG...TAAGGAGATCCAATAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR GCA 90 bp | GAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTTCCGGAGAGAAAGCTTTAAGTaGATTCAGAGCTTGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: EQHLHPGPGRQRTDACFRRESFK*IQSLDF Trigger: AAAATCCAAGCTCTGAATGCACTTAAAGCTTTCTCT...CCGGAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CCA 90 bp | GATGAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTTCTTGATGCAATGCTCCTaGATTTTGAGCCTGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: DEQHLHPGPGRQRTDACFLMQCS*ILSLNF Trigger: GAAATTCAGGCTCAAAATCCAGGAGCATTGCATCAA...GAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCAACAGAAGGGGCAGTCTCCCAAACACAGAAGTGGGATGTGTTTGGGGACGCACCTGACAGTTaGGAATGTCATAAAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RAATEGAVSQTQKWDVFGDAPDS*ECHKEG Trigger: ACCTTCTTTATGACATTCTCAACTGTCAGGTGCGTC...CCCAAACACATCCCACTTCTGTGTTTGGGAGACTGCCCCTTCTGTTGCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| 3UTR CAA 72 bp | TCCAAGTCCCAGATGGTGGAAATCAGTTCCAGTACCTaGATGCAATGCTCCTGGATTTTGAGCCTGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: SKSQMVEISSST*MQCSWILSLNF Trigger: GAAATTCAGGCTCAAAATCCAGGAGCATTGCATCAAGGTACTGGAACTGATTTCCACCATCTGGGACTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| 3UTR CAA 72 bp | ATCAGTTCCAGTACCTTGATGCAATGCTCCTGGATTTaGAGCCTGAATTTCCTGATGCCAGAGAAAGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: ISSSTLMQCSWI*SLNFLMPEKAL Trigger: TAAAGCTTTCTCTGGCATCAGGAAATTCAGGCTCAAAATCCAGGAGCATTGCATCAAGGTACTGGAACTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS GCA 90 bp | CGGAGTCCCGCCCGTGGCGCTCTCTCTCGATGGCCAGGCGGGCAATaGAGATCGGCGAGTTGGAGCAGAGTGGCGGATGACATTTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: RSPARGALSRWPGGQ*RSASWSRVADDILS Trigger: GCTTAAAATGTCATCCGCCACTCTGCTCCAACTCGCCGATCTGCATTGCCCGCCTGGCCATCGAGAGAGAGCGCCACGGGCGGGACTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS CCA 90 bp | TCTAGAGAGTTGAGAAGTCTTCGAATCTCACCGGAGTCCCGCCCGTaGCGCTCTCTCTCGATGGCCAGGCGGGCAATGCAGATCGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: SRELRSLRISPESRP*RSLSMARRAMQIGE Trigger: CTCGCCGATCTGCATTGCCCGCCTGGCCATCGAGAGAGAGCGCCACGGGCGGGACTCCGGTGAGATTCGAAGACTTCTCAACTCTCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR CAA 90 bp | TGTGTTTGGGTGCTGTTCCACGGCCTAGGGGGAGGCCCTGATGAACAGCACCTCTTTGATGAGGTCCAGTaGCTCCAGGAACCGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: CVWVLFHGLGGGPDEQHLFDEVQ*LQEPGN Trigger: ATTCCCCGGTTCCTGGAGCAACTGGACCTCATCAAA...GAGGTGCTGTTCATCAGGGCCTCCCCCTAGGCCGTGGAACAGCACCCAAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS-3UTR CAA 90 bp | CTGATGAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTGGCTTCGTGCAGGGATaGCTCGTTGTAATGCCATTT | + |
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Preference number: 5 (lower is better) Translates to: LMNSTSTQVLGGNGQTLAGFVQG*LVVMPF Trigger: AAATGGCATTACAACGAGCAATCCCTGCACGAAGCC...AGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CAA 90 bp | CCTCGAACAGCAGACTGCCCGGCTGTGAAGACTGGAAGAGGTTCAGGAAGTTGGTTTGATGAGGTCCAGTaGCTCCAGGAACCGGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: PRTADCPAVKTGRGSGSWFDEVQ*LQEPGN Trigger: ATTCCCCGGTTCCTGGAGCAACTGGACCTCATCAAA...CCAACTTCCTGAACCTCTTCCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACTGGATTTTTACACTGTaGTCCTTCTCATCTAGCATG | + |
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Preference number: 5 (lower is better) Translates to: GRQRTDACFRRPRASLPYWIFTL*SFSSSM Trigger: CATGCTAGATGAGAAGGACAACAGTGTAAAAATCCA...GTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTTGCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CAA 90 bp | GATGAACAGCACCTCCACCCAGGTCCTGGGAGGCAACGGACAGACGCTTGCTTCCAATGCTCCTGGATTTaGAGCCTGAATTTCCTGATG | + |
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Preference number: 5 (lower is better) Translates to: DEQHLHPGPGRQRTDACFQCSWI*SLNFLM Trigger: CATCAGGAAATTCAGGCTCAAAATCCAGGAGCATTG...GAAGCAAGCGTCTGTCCGTTGCCTCCCAGGACCTGGGTGGAGGTGCTGTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS TCA 90 bp | GAAGAGGCCTCAGCCTCCAGCAAGTACACGCAGCGGGTGATGTTATaGAGGATCATGCTCCTGGTATACTCATCCTGTTTGCAGTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: EEASASSKYTQRVML*RIMLLVYSSCLQSR Trigger: TCTAGACTGCAAACAGGATGAGTATACCAGGAGCATGATCCTTCATAACATCACCCGCTGCGTGTACTTGCTGGAGGCTGAGGCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233837.2 ENSMUST00000233923.2 |
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| CDS TCA 90 bp | CCAGCACCTCGAACAGCAGACTGCCCGGCTGTGAAGACTGACAGTTaGGAATGTCATAAAGAAGGTCGTTCTTCTGTGCCAGGTAACTCA | + |
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Preference number: 5 (lower is better) Translates to: PAPRTADCPAVKTDS*ECHKEGRSSVPGNS Trigger: TGAGTTACCTGGCACAGAAGAACGACCTTCTTTATGACATTCTCAACTGTCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGGTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025060.4 |
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| CDS-3UTR CAA 90 bp | AACGGACAGACGCTTGCTTCCGGAGGCCTCGAGCTTCCCTCCCGTACGCATTTAAAGTGCATTCAGAGCTaGGATTTTTACACTGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: NGQTLASGGLELPSRTHLKCIQS*DFYTVV Trigger: GACAACAGTGTAAAAATCCAAGCTCTGAATGCACTT...TAAATGCGTACGGGAGGGAAGCTCGAGGCCTCCGGAAGCAAGCGTCTGTCCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233923.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGTTGTTGAGCAATCGGAGACCAGCTACGTGCAATTCCAAGTCCCAGATGTTGCAGTCTAGAGAGTaGAGAAGTCTTCGAATCTCA | + |
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Preference number: 5 (lower is better) Translates to: GRLLSNRRPATCNSKSQMLQSRE*RSLRIS Trigger: TGAGATTCGAAGACTTCTCAACTCTCTAGACTGCAA...CATCTGGGACTTGGAATTGCACGTAGCTGGTCTCCGATTGCTCAACAACCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGCAACAGAAGGGGCAGTCTCCCAAACACAGAAGTGGGATGTGTTTGGTTGCAGTCTAGAGAGTaGAGAAGTCTTCGAATCTCA | + |
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Preference number: 5 (lower is better) Translates to: KSSNRRGSLPNTEVGCVWLQSRE*RSLRIS Trigger: TGAGATTCGAAGACTTCTCAACTCTCTAGACTGCAA...CCAAACACATCCCACTTCTGTGTTTGGGAGACTGCCCCTTCTGTTGCTGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS TCA 90 bp | GATGTCATCCATAGTACAAGAAGAGGCACGCAGCGGGTGATGTTATaGAGGATCATGCTCCTGGTATACTCATCCTGTTTGCAGTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: DVIHSTRRGTQRVML*RIMLLVYSSCLQSR Trigger: TCTAGACTGCAAACAGGATGAGTATACCAGGAGCATGATCCTTCATAACATCACCCGCTGCGTGCCTCTTCTTGTACTATGGATGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS GCA 72 bp | GAGCCCTCTCCCCAGGACCTGGACACTTACGGGCAATaGAGATCGGCGAGTTGGAGCAGAGTGGCGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: EPSPQDLDTYGQ*RSASWSRVADD Trigger: GTCATCCGCCACTCTGCTCCAACTCGCCGATCTGCATTGCCCGTAAGTGTCCAGGTCCTGGGGAGAGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233837.2 |
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| CDS CCA 72 bp | TTGAGAAGTCTTCGAATCTCACCGGAGTCCCGCCCGTaGCGCTCTCTCTCGATGGCCAGGCGGGCAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LRSLRISPESRP*RSLSMARRAMQ Trigger: CTGCATTGCCCGCCTGGCCATCGAGAGAGAGCGCCACGGGCGGGACTCCGGTGAGATTCGAAGACTTCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS CAA 72 bp | AAGGCCCCGGCGCCTGTAGCCAGGCCCACGAAGCTTTaGATGAGGTCCAGTTGCTCCAGGAACCGGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: KAPAPVARPTKL*MRSSCSRNRGM Trigger: CATTCCCCGGTTCCTGGAGCAACTGGACCTCATCAAAAGCTTCGTGGGCCTGGCTACAGGCGCCGGGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233837.2 ENSMUST00000233923.2 |
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| CDS CAA 90 bp | AGCAGGTATAAGGCCCCGGCGCCTGTAGCCAGGCCCACGAAGCTTTaGATGAGGTCCAGTTGCTCCAGGAACCGGGGAATGGTCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRYKAPAPVARPTKL*MRSSCSRNRGMVLP Trigger: GGGCAAGACCATTCCCCGGTTCCTGGAGCAACTGGACCTCATCAAAAGCTTCGTGGGCCTGGCTACAGGCGCCGGGGCCTTATACCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233837.2 ENSMUST00000233923.2 |
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| CDS CCA 72 bp | TCTCGATGGCCAGGCGGGCAATGCAGATCGGCGAGTTaGAGCAGAGTGGCGGATGACATTTTAAGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRWPGGQCRSAS*SRVADDILSQS Trigger: GGACTGGCTTAAAATGTCATCCGCCACTCTGCTCCAACTCGCCGATCTGCATTGCCCGCCTGGCCATCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233923.2 |
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| CDS CCA 72 bp | GACCTGGACACTTACGGGCAATGCAGATCGGCGAGTTaGAGCAGAGTGGCGGATGACATTTTAAGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: DLDTYGQCRSAS*SRVADDILSQS Trigger: GGACTGGCTTAAAATGTCATCCGCCACTCTGCTCCAACTCGCCGATCTGCATTGCCCGTAAGTGTCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233837.2 |
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| CDS TCA 72 bp | TCCTGGTATACTCATCCTGTTTGCAGTCTAGAGAGTTaGGAAGTCTTCGAATCTCACCGGAGTCCCGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: SWYTHPVCSLES*EVFESHRSPAR Trigger: ACGGGCGGGACTCCGGTGAGATTCGAAGACTTCTCAACTCTCTAGACTGCAAACAGGATGAGTATACCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025060.4 ENSMUST00000233114.2 ENSMUST00000233837.2 ENSMUST00000233923.2 |
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| CDS TCA 72 bp | AAGAGGCCTCAGCCTCCAGCAAGTACACGCAGCGGGTaGTGTTATGAAGGATCATGCTCCTGGTATACTCAT | + |
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Preference number: 6 (lower is better) Translates to: KRPQPPASTRSG*CYEGSCSWYTH Trigger: ATGAGTATACCAGGAGCATGATCCTTCATAACATCACCCGCTGCGTGTACTTGCTGGAGGCTGAGGCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233837.2 ENSMUST00000233923.2 |
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| CDS TCA 72 bp | TCAGCCTCCAGCAAGTACACGCAGCGGGTGATGTTATaGAGGATCATGCTCCTGGTATACTCATCCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SASSKYTQRVML*RIMLLVYSSCL Trigger: CAAACAGGATGAGTATACCAGGAGCATGATCCTTCATAACATCACCCGCTGCGTGTACTTGCTGGAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025060.4 ENSMUST00000233837.2 ENSMUST00000233923.2 |
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| CDS TCA 72 bp | AAACACCAGCACCTCGAACAGCAGACTGCCCGGCTGTaGAGACTGACAGTTGAGAATGTCATAAAGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: KHQHLEQQTARL*RLTVENVIKKV Trigger: GACCTTCTTTATGACATTCTCAACTGTCAGTCTTCACAGCCGGGCAGTCTGCTGTTCGAGGTGCTGGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025060.4 |
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| CDS TCA 72 bp | CATAGTACAAGAAGAGGCACGCAGCGGGTGATGTTATaGAGGATCATGCTCCTGGTATACTCATCCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HSTRRGTQRVML*RIMLLVYSSCL Trigger: CAAACAGGATGAGTATACCAGGAGCATGATCCTTCATAACATCACCCGCTGCGTGCCTCTTCTTGTACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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| CDS TCA 72 bp | ATGTCATCCATAGTACAAGAAGAGGCACGCAGCGGGTaGTGTTATGAAGGATCATGCTCCTGGTATACTCAT | + |
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Preference number: 6 (lower is better) Translates to: MSSIVQEEARSG*CYEGSCSWYTH Trigger: ATGAGTATACCAGGAGCATGATCCTTCATAACATCACCCGCTGCGTGCCTCTTCTTGTACTATGGATGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233114.2 |
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