Pregenerated sensors for ARMC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038525Ensembl transcript IDs: ENSMUST00000072896.13, ENSMUST00000095495.3, ENSMUST00000148873.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTaGACTCGAGCTTGCAGTATTCACTGGTTTGAGGCACAAGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LTMSSDLQAAWQGWW*TRACSIHWFEAQGP Trigger: AGGACCTTGTGCCTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 90 bp | TGCTGCAGGCAGTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATaGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTATTCACTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: CCRQCLTMSSDLQAA*QGWWWTRACSIHWF Trigger: AAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACACTGCCTGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 90 bp | TGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTaGTGGACTCGAGCTTGCAGTATTCACTGGTTTGAGGCACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: CLTMSSDLQAAWQGW*WTRACSIHWFEAQG Trigger: ACCTTGTGCCTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 90 bp | CAGTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTaGTGGTGGACTCGAGCTTGCAGTATTCACTGGTTTGAGGCACAA | + |
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Preference number: 1 (lower is better) Translates to: QCLTMSSDLQAAWQG*WWTRACSIHWFEAQ Trigger: TTGTGCCTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR GCA 90 bp | CGCTTTCCATGTAAATGGGAGTACAGTCCTACTGATCAGAAATGCTaGAGGCAGTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: RFPCKWEYSPTDQKC*RQCLTMSSDLQAAW Trigger: CCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACACTGCCTGCAGCATTTCTGATCAGTAGGACTGTACTCCCATTTACATGGAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACACGGCTCACACCGCCTaGCCTTCTTCAGAGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: VSHDELRLASSMAGLVVDTAHTA*PSSEHR Trigger: CCTGTGCTCTGAAGAAGGCCAGGCGGTGTGAGCCGT...GTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR CAA 90 bp | CATGGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTATTCACTGGTTaGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTCAACTCA | + |
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Preference number: 2 (lower is better) Translates to: HGRVGGGLELAVFTG*RHKVLAVAVTDFNS Trigger: TGAGTTGAAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTATGTCTCATGAGCAACTaGAAATGCTCCCAGGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: AQTCKQHGRVGGGLELAVCLMSN*KCSQEL Trigger: TAACTCCTGGGAGCATTTGCAGTTGCTCATGAGACA...TACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTGTGGGTGGAAGCTTGGAGTGCTCTGCAGTATCTTACACAAGGGGGTACTGTGGGTGGAAGCTTaGAGTGCTCTGCAGTATCTT | + |
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Preference number: 2 (lower is better) Translates to: SACGWKLGVLCSILHKGVLWVEA*SALQYL Trigger: AAGATACTGCAGAGCACTCCAAGCTTCCACCCACAG...TACCCCCTTGTGTAAGATACTGCAGAGCACTCCAAGCTTCCACCCACAGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACCTCCATGTATCCATCTaGACTTATCAGGACACTCTT | + |
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Preference number: 2 (lower is better) Translates to: VSHDELRLASSMAGLVVDLHVSI*TYQDTL Trigger: AAGAGTGTCCTGATAAGTCCAGATGGATACATGGAG...GTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTGTGGGTGGAAGCTTGGAGTGCTCTGCAGTATCTTACACAAGGGGGTAAATGAAGAATCCACCTaGAAGAGGAAACAGCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SACGWKLGVLCSILHKGVNEEST*KRKQRH Trigger: GTGACGCTGTTTCCTCTTTCAGGTGGATTCTTCATT...TACCCCCTTGTGTAAGATACTGCAGAGCACTCCAAGCTTCCACCCACAGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTGTGGGTGGAAGCTTGGAGTGCTCTGCAGTATCTTACACAAGGGGGTAGGGACCCTAATACATTaGTTCCCAGCATGCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SACGWKLGVLCSILHKGVGTLIH*FPACFQ Trigger: TTGAAAGCATGCTGGGAAGCAATGTATTAGGGTCCC...TACCCCCTTGTGTAAGATACTGCAGAGCACTCCAAGCTTCCACCCACAGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACGACTGCCTTACTGTTTaGGTCTTTGATAAAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: VSHDELRLASSMAGLVVDDCLTV*VFDKNR Trigger: CCTATTTTTATCAAAGACTCAAACAGTAAGGCAGTC...GTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCTGCAGTATCTTACACAAGGGGGTAAGCAGTAAGAAAACGCTTTCCATGCAAAGTGGCCAGAGATaGAAAGTCTGCTGGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: VLCSILHKGVSSKKTLSMQSGQR*KVCWCH Trigger: GTGGCACCAGCAGACTTTCCATCTCTGGCCACTTTG...CATGGAAAGCGTTTTCTTACTGCTTACCCCCTTGTGTAAGATACTGCAGAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR TCA 90 bp | CCAAACGGTAGAAACAGGAACACAAAGAAATCTATGTACCCTAGTCCCAGTCCCCTTAACGCTGTCTCATaGGCAACTGCAAATGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PNGRNRNTKKSMYPSPSPLNAVS*ATANAP Trigger: GGGAGCATTTGCAGTTGCTCATGAGACAGCGTTAAG...GGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTGTTTCTACCGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAGCATGGCCAGTCTGTCCACGATCATAACCAAACGTTTGCCCCGTAAAAGATGGAAAGTCTGCTaGTGCCACAGAGAAGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LKSMASLSTIITKRLPRKRWKVC*CHREVL Trigger: TAAAACTTCTCTGTGGCACCAGCAGACTTTCCATCT...TTTACGGGGCAAACGTTTGGTTATGATCGTGGACAGACTGGCCATGCTCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGGCAAGCGTAAGGGACATGTTTCATTTTTATTCCATGTTACAAGTGAAACAGGACGGAGCAGATaGCTCGATTTCTGCAGACGG | + |
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Preference number: 2 (lower is better) Translates to: TPGKRKGHVSFLFHVTSETGRSR*LDFCRR Trigger: CCGTCTGCAGAAATCGAGCCATCTGCTCCGTCCTGT...TTCACTTGTAACATGGAATAAAAATGAAACATGTCCCTTACGCTTGCCTGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTATTCACTGGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTGACTGCCTTACTGTTTaGGTCTTTGATAAAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: CSIHWFEAQGPCCGSNRLDCLTV*VFDKNR Trigger: CCTATTTTTATCAAAGACTCAAACAGTAAGGCAGTC...AAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR GCA 90 bp | GTAGAAACAGGAACACAAAGAAATCTATGTACCCTAGTCCCAGTCCCAGAAGTTGTGACAGAAAAATACTaGAAAGTGGCCAGAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: VETGTQRNLCTLVPVPEVVTEKY*KVARDG Trigger: TCCATCTCTGGCCACTTTGCAGTATTTTTCTGTCAC...AACTTCTGGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTGTTTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGGCAAGCGTAAGGGACATGTTTCATTTTTATTCCATGTTACAAGTGAAATGAGCAACTGCAAATaGTCCCAGGAGTTAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: TPGKRKGHVSFLFHVTSEMSNCK*SQELGL Trigger: CAATCCTAACTCCTGGGAGCATTTGCAGTTGCTCAT...TTCACTTGTAACATGGAATAAAAATGAAACATGTCCCTTACGCTTGCCTGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR GCA 90 bp | GTAGAAACAGGAACACAAAGAAATCTATGTACCCTAGTCCCAGTCCCAGAAGTTTGGAAAGTCTGCTGGTaGCACAGAGAAGTTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: VETGTQRNLCTLVPVPEVWKVCW*HREVLK Trigger: TTTTAAAACTTCTCTGTGGCACCAGCAGACTTTCCA...AACTTCTGGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTGTTTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR GCA 90 bp | CAATTTATGCTCAGTACAAATCCAAACGGTAGAAACAGGAACACAAAGAAATCTATGAGCAACTGCAAATaGTCCCAGGAGTTAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: QFMLSTNPNGRNRNTKKSMSNCK*SQELGL Trigger: CAATCCTAACTCCTGGGAGCATTTGCAGTTGCTCAT...AGATTTCTTTGTGTTCCTGTTTCTACCGTTTGGATTTGTACTGAGCATAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CCA 90 bp | CAATTTATGCTCAGTACAAATCCAAACGGTAGAAACAGGAACACAAAGAAATCTCTCCATGTATCCATCTaGACTTATCAGGACACTCTT | + |
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Preference number: 2 (lower is better) Translates to: QFMLSTNPNGRNRNTKKSLHVSI*TYQDTL Trigger: AAGAGTGTCCTGATAAGTCCAGATGGATACATGGAG...AGATTTCTTTGTGTTCCTGTTTCTACCGTTTGGATTTGTACTGAGCATAAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR TCA 90 bp | CAATTTATGCTCAGTACAAATCCAAACGGTAGAAACAGGAACACAAAGAAATCTGTCCCAGAAGTTTTCTaGATCGTTCTAGAAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: QFMLSTNPNGRNRNTKKSVPEVF*IVLEMF Trigger: GAACATTTCTAGAACGATTCAGAAAACTTCTGGGAC...AGATTTCTTTGTGTTCCTGTTTCTACCGTTTGGATTTGTACTGAGCATAAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR GCA 72 bp | CTCCTAAGTTCCATGGGAACACTAAGAACTTGCTGGTaGTGGCTGAATGCTCAGGACCGAGCCCACACAGGG | + |
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Preference number: 3 (lower is better) Translates to: LLSSMGTLRTCW*WLNAQDRAHTG Trigger: CCCTGTGTGGGCTCGGTCCTGAGCATTCAGCCAGCACCAGCAAGTTCTTAGTGTTCCCATGGAACTTAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | CAGATGGCTCGATTTCTGCAGACGGCTCACACCGCCTaGCCTTCTTCAGAGCACAGGGACTGTTTCAATGGT | + |
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Preference number: 3 (lower is better) Translates to: QMARFLQTAHTA*PSSEHRDCFNG Trigger: ACCATTGAAACAGTCCCTGTGCTCTGAAGAAGGCCAGGCGGTGTGAGCCGTCTGCAGAAATCGAGCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | CAGGGTTGGTGGTGGACTCGAGCTTGCAGTATTCACTaGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: QGWWWTRACSIH*FEAQGPCCGSN Trigger: GTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | AGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTaGACTCGAGCTTGCAGTATTCACTGGTTTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSDLQAAWQGWW*TRACSIHWFEA Trigger: TGCCTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | CAGTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATaGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTATT | + |
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Preference number: 3 (lower is better) Translates to: QCLTMSSDLQAA*QGWWWTRACSI Trigger: AATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR GCA 72 bp | GGGCTGTCTGCCTGTGGGTGGAAGCTTGGAGTGCTCTaGAGTATCTTACACAAGGGGGTAAGCAGTAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GLSACGWKLGVL*SILHKGVSSKK Trigger: TTTCTTACTGCTTACCCCCTTGTGTAAGATACTGCAGAGCACTCCAAGCTTCCACCCACAGGCAGACAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR GCA 72 bp | TTGCTTCTCCTAAGTTCCATGGGAACACTAAGAACTTaGTGGTGCTGGCTGAATGCTCAGGACCGAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LLLLSSMGTLRT*WCWLNAQDRAH Trigger: GTGGGCTCGGTCCTGAGCATTCAGCCAGCACCAGCAAGTTCTTAGTGTTCCCATGGAACTTAGGAGAAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | ATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTaGTGGACTCGAGCTTGCAGTATTCACTGGTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: MSSDLQAAWQGW*WTRACSIHWFE Trigger: CTCAAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | ACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTaGTGGTGGACTCGAGCTTGCAGTATTCACTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: TMSSDLQAAWQG*WWTRACSIHWF Trigger: AAACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | CTTCTCCTAAGTTCCATGGGAACACTAAGAACTTGCTaGTGCTGGCTGAATGCTCAGGACCGAGCCCACACA | + |
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Preference number: 3 (lower is better) Translates to: LLLSSMGTLRTC*CWLNAQDRAHT Trigger: TGTGTGGGCTCGGTCCTGAGCATTCAGCCAGCACCAGCAAGTTCTTAGTGTTCCCATGGAACTTAGGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR CAA 90 bp | GTGCTCTGCAGTATCTTACACAAGGGGGTAAGCAGTAAGAAAACGCTTTCCATGAGCAGCATGGCAGGGTaGGTGGTGGACTCGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VLCSILHKGVSSKKTLSMSSMAG*VVDSSL Trigger: CAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCT...CATGGAAAGCGTTTTCTTACTGCTTACCCCCTTGTGTAAGATACTGCAGAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTAACTCACTCAGTACAGTaGTTTCAGCAAATGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AQTCKQHGRVGGGLELAVTHSVQ*FQQMLR Trigger: CCTCAGCATTTGCTGAAACAACTGTACTGAGTGAGT...TACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR CAA 90 bp | GTGCTCTGCAGTATCTTACACAAGGGGGTAAGCAGTAAGAAAACGCTTTCCATGGCAGTATTCACTGGTTaGAGGCACAAGGTCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: VLCSILHKGVSSKKTLSMAVFTG*RHKVLA Trigger: AGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGC...CATGGAAAGCGTTTTCTTACTGCTTACCCCCTTGTGTAAGATACTGCAGAGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGATCAGAAATGCTGCAGGCAGTGTCTCACGATGAGCTCAGACTTGCAAGCAAACCGGCCTTCCACTTaGAGGCAGTTGTTTATATTC | + |
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Preference number: 3 (lower is better) Translates to: TDQKCCRQCLTMSSDLQANRPST*RQLFIF Trigger: GAATATAAACAACTGCCTCAAAGTGGAAGGCCGGTT...TGCTTGCAAGTCTGAGCTCATCGTGAGACACTGCCTGCAGCATTTCTGATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR-3UTR CAA 90 bp | GTAGAAACAGGAACACAAAGAAATCTATGTACCCTAGTCCCAGTCCCAGAAGTTGGGAACACTAAGAACTaGCTGGTGCTGGCTGAATGC | + |
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Preference number: 3 (lower is better) Translates to: VETGTQRNLCTLVPVPEVGNTKN*LVLAEC Trigger: GCATTCAGCCAGCACCAGCAAGTTCTTAGTGTTCCC...AACTTCTGGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTGTTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR GCA 72 bp | TGTAAATGGGAGTACAGTCCTACTGATCAGAAATGCTaGAGGCAGTGTCTCACGATGAGCTCAGACTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: CKWEYSPTDQKC*RQCLTMSSDLQ Trigger: TTGCAAGTCTGAGCTCATCGTGAGACACTGCCTGCAGCATTTCTGATCAGTAGGACTGTACTCCCATTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | ATTGCTTCCCAGCATGCTTTCAAAGCAGCCATCTCATaGGTATGTTTCTCCATGTATCCATCTGGACTTATC | + |
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Preference number: 3 (lower is better) Translates to: IASQHAFKAAIS*VCFSMYPSGLI Trigger: GATAAGTCCAGATGGATACATGGAGAAACATACCCATGAGATGGCTGCTTTGAAAGCATGCTGGGAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CCA 72 bp | TGCAGTGACAGAAAAATACTGCAAAGTGGCCAGAGATaGAAAGTCTGCTGGTGCCACAGAGAAGTTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CSDRKILQSGQR*KVCWCHREVLK Trigger: TTTTAAAACTTCTCTGTGGCACCAGCAGACTTTCCATCTCTGGCCACTTTGCAGTATTTTTCTGTCACTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR TCA 72 bp | AATCTATGTACCCTAGTCCCAGTCCCAGAAGTTTTCTaGATCGTTCTAGAAATGTTCTGTCCATGTATAAGT | + |
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Preference number: 3 (lower is better) Translates to: NLCTLVPVPEVF*IVLEMFCPCIS Trigger: ACTTATACATGGACAGAACATTTCTAGAACGATTCAGAAAACTTCTGGGACTGGGACTAGGGTACATAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | GCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTAGCCCAGGACCAGCCCTaGTGCCACCCAGCCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: AQTCKQHGRVGGGLELAVAQDQP*CHPAHV Trigger: GACGTGGGCTGGGTGGCAGCAGGGCTGGTCCTGGGC...TACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | CTGAAGAGCATGGCCAGTCTGTCCACGATCATAACCAAACGTTTGCCCCGTAAACAGGACCAGCCCTGCTaGCACCCAGCCCACGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LKSMASLSTIITKRLPRKQDQPC*HPAHVP Trigger: CGGGACGTGGGCTGGGTGGCAGCAGGGCTGGTCCTG...TTTACGGGGCAAACGTTTGGTTATGATCGTGGACAGACTGGCCATGCTCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | TGCAGTATTCACTGGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTCAGGACCAGCCCTGCTaGCACCCAGCCCACGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: CSIHWFEAQGPCCGSNRLQDQPC*HPAHVP Trigger: CGGGACGTGGGCTGGGTGGCAGCAGGGCTGGTCCTG...AAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | CACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCGAGCAAACCTGGACCTTGGTaGTTCCGTTTCCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HDELRLASSMAGLVVDSSKPGPW*FRFPAA Trigger: TGCTGCTGGGAAACGGAAGCACCAAGGTCCAGGTTT...GCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | CATGAGCAACTGCAAATGCTCCCAGGAGTTAGGATTGTACAGAGACAGGCCACTCCCAGCAGCAGCAGGTaGAACAGGCCAGCGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: HEQLQMLPGVRIVQRQATPSSSR*NRPATE Trigger: CTCCGTCGCTGGCCTGTTCCACCTGCTGCTGCTGGG...AGTGGCCTGTCTCTGTACAATCCTAACTCCTGGGAGCATTTGCAGTTGCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | GTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCAAAACCTGGACCTTaGTGCTTCCGTTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSHDELRLASSMAGLVVDSKPGP*CFRFPA Trigger: TGCTGGGAAACGGAAGCACCAAGGTCCAGGTTTTGA...GTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CAA 72 bp | CACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTaGGTGGTGGACTCGAGCTTGCAGTATTCACTGGTT | + |
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Preference number: 4 (lower is better) Translates to: HDELRLASSMAG*VVDSSLQYSLV Trigger: AACCAGTGAATACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CAA 72 bp | GTTGCTTCTCCTAAGTTCCATGGGAACACTAAGAACTaGCTGGTGCTGGCTGAATGCTCAGGACCGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VASPKFHGNTKN*LVLAECSGPSP Trigger: TGGGCTCGGTCCTGAGCATTCAGCCAGCACCAGCAAGTTCTTAGTGTTCCCATGGAACTTAGGAGAAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | GTAGAAACAGGAACACAAAGAAATCTATGTACCCTAGTCCCAGTCCCAGAAGTTCCCAGCAGCAGCAGGTaGAACAGGCCAGCGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: VETGTQRNLCTLVPVPEVPSSSR*NRPATE Trigger: CTCCGTCGCTGGCCTGTTCCACCTGCTGCTGCTGGG...AACTTCTGGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTGTTTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCTGTGGGTGGAAGCTTGGAGTGCTCTGCAGTATCTTACACAAGGGGGTAAGCAGCTTCAAAACCTaGACCTTGGTGCTTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: SACGWKLGVLCSILHKGVSSFKT*TLVLPF Trigger: AAACGGAAGCACCAAGGTCCAGGTTTTGAAGCTGCT...TACCCCCTTGTGTAAGATACTGCAGAGCACTCCAAGCTTCCACCCACAGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | CAATTTATGCTCAGTACAAATCCAAACGGTAGAAACAGGAACACAAAGAAATCTGCCCAGGACCAGCCCTaGTGCCACCCAGCCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: QFMLSTNPNGRNRNTKKSAQDQP*CHPAHV Trigger: GACGTGGGCTGGGTGGCAGCAGGGCTGGTCCTGGGC...AGATTTCTTTGTGTTCCTGTTTCTACCGTTTGGATTTGTACTGAGCATAAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | GCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTAGGTAATCTACTTACTTaGACACTCAGTAGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AQTCKQHGRVGGGLELAVGNLLT*TLSSPS Trigger: AGAAGGACTACTGAGTGTCCAAGTAAGTAGATTACC...TACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| 3UTR CAA 72 bp | CTCATGAGCAACTGCAAATGCTCCCAGGAGTTAGGATaGTACAGAGACAGGCCACTCAGTTCGTGTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LMSNCKCSQELG*YRDRPLSSCQE Trigger: TTCCTGACACGAACTGAGTGGCCTGTCTCTGTACAATCCTAACTCCTGGGAGCATTTGCAGTTGCTCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| 3UTR CAA 72 bp | AGGACCGAGCCCACACAGGGGACTCACTCAGTACAGTaGTTTCAGCAAATGCTGAGGTACACATGCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: RTEPTQGTHSVQ*FQQMLRYTCTK Trigger: TTTTGTGCATGTGTACCTCAGCATTTGCTGAAACAACTGTACTGAGTGAGTCCCCTGTGTGGGCTCGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | ACGCTGTCTCATGAGCAACTGCAAATGCTCCCAGGAGTTAGGATTGTACAGAGATCAAAACCTGGACCTTaGTGCTTCCGTTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TLSHEQLQMLPGVRIVQRSKPGP*CFRFPA Trigger: TGCTGGGAAACGGAAGCACCAAGGTCCAGGTTTTGA...TCTCTGTACAATCCTAACTCCTGGGAGCATTTGCAGTTGCTCATGAGACAGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | TGCAGTATTCACTGGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTAAATCTCTGTATGTGTaGACTAATGAACCGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CSIHWFEAQGPCCGSNRLKSLYV*TNEPGR Trigger: CCTACCCGGTTCATTAGTGCACACATACAGAGATTT...AAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | GTGCTCTGCAGTATCTTACACAAGGGGGTAAGCAGTAAGAAAACGCTTTCCATGGTAGTCCTTCTGTCATaGCTGGATTCTCAGACAAAT | + |
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Preference number: 4 (lower is better) Translates to: VLCSILHKGVSSKKTLSMVVLLS*LDSQTN Trigger: ATTTGTCTGAGAATCCAGCCATGACAGAAGGACTAC...CATGGAAAGCGTTTTCTTACTGCTTACCCCCTTGTGTAAGATACTGCAGAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CCA 90 bp | GGGGACTCACTCAGTACAGTTGTTTCAGCAAATGCTGAGGTACACATGCACAAAGTAGTCCTTCTGTCATaGCTGGATTCTCAGACAAAT | + |
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Preference number: 4 (lower is better) Translates to: GDSLSTVVSANAEVHMHKVVLLS*LDSQTN Trigger: ATTTGTCTGAGAATCCAGCCATGACAGAAGGACTAC...TTTGTGCATGTGTACCTCAGCATTTGCTGAAACAACTGTACTGAGTGAGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR TCA 90 bp | TGCAGTATTCACTGGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTTTTGGTTCAGGGAGTTaGTTTTGTTTCCAACAATTG | + |
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Preference number: 4 (lower is better) Translates to: CSIHWFEAQGPCCGSNRLFGSGS*FCFQQL Trigger: CAATTGTTGGAAACAAAATCAACTCCCTGAACCAAA...AAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR TCA 90 bp | GTGCTCTGCAGTATCTTACACAAGGGGGTAAGCAGTAAGAAAACGCTTTCCATGTTTGGTTCAGGGAGTTaGTTTTGTTTCCAACAATTG | + |
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Preference number: 4 (lower is better) Translates to: VLCSILHKGVSSKKTLSMFGSGS*FCFQQL Trigger: CAATTGTTGGAAACAAAATCAACTCCCTGAACCAAA...CATGGAAAGCGTTTTCTTACTGCTTACCCCCTTGTGTAAGATACTGCAGAGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | TGCAGTATTCACTGGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTAGAAGTTTCTTAAGCTaGTCTGCATTTAAGATATCG | + |
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Preference number: 4 (lower is better) Translates to: CSIHWFEAQGPCCGSNRLRSFLS*SAFKIS Trigger: CGATATCTTAAATGCAGAGCAGCTTAAGAAACTTCT...AAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR GCA 90 bp | CAATTTATGCTCAGTACAAATCCAAACGGTAGAAACAGGAACACAAAGAAATCTAAACCTGGACCTTGGTaGTTCCGTTTCCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QFMLSTNPNGRNRNTKKSKPGPW*FRFPAA Trigger: TGCTGCTGGGAAACGGAAGCACCAAGGTCCAGGTTT...AGATTTCTTTGTGTTCCTGTTTCTACCGTTTGGATTTGTACTGAGCATAAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR TCA 90 bp | GTAGAAACAGGAACACAAAGAAATCTATGTACCCTAGTCCCAGTCCCAGAAGTTCAGTTGTTTATATTCTaGAACAGTGTAAGAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: VETGTQRNLCTLVPVPEVQLFIF*NSVRAR Trigger: TCGGGCTCTTACACTGTTTCAGAATATAAACAACTG...AACTTCTGGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTGTTTCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072896.13 |
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| 3UTR CAA 72 bp | TGGCCTTCTTCAGAGCACAGGGACTGTTTCAATGGTTaGTTACATGTTTTCAACAGTCTTGCTAATTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: WPSSEHRDCFNG*LHVFNSLANLL Trigger: TAACAAATTAGCAAGACTGTTGAAAACATGTAACAAACCATTGAAACAGTCCCTGTGCTCTGAAGAAGGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | GTGTCTCACGATGAGCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACAACCGGCCTTCCACTTaGAGGCAGTTGTTTATATTC | + |
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Preference number: 5 (lower is better) Translates to: VSHDELRLASSMAGLVVDNRPST*RQLFIF Trigger: GAATATAAACAACTGCCTCAAAGTGGAAGGCCGGTT...GTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGCTCATCGTGAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072896.13 |
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| CDS-3UTR CAA 90 bp | TGCAGTATTCACTGGTTTGAGGCACAAGGTCCTTGCTGTGGCAGTAACAGACTTTTCAAAACCTGGACCTaGGTGCTTCCGTTTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: CSIHWFEAQGPCCGSNRLFKTWT*VLPFPS Trigger: GCTGGGAAACGGAAGCACCAAGGTCCAGGTTTTGAA...AAGTCTGTTACTGCCACAGCAAGGACCTTGTGCCTCAAACCAGTGAATACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | GCTCAGACTTGCAAGCAGCATGGCAGGGTTGGTGGTGGACTCGAGCTTGCAGTACTTTGGTTCAGGGAGTaGATTTTGTTTCCAACAATT | + |
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Preference number: 5 (lower is better) Translates to: AQTCKQHGRVGGGLELAVLWFRE*ILFPTI Trigger: AATTGTTGGAAACAAAATCAACTCCCTGAACCAAAG...TACTGCAAGCTCGAGTCCACCACCAACCCTGCCATGCTGCTTGCAAGTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS CCA 90 bp | CTCTGTATGTGTGCACTAATGAACCGGGTAGGTAATCTACTTACTTaGACACTCAGTAGTCCTTCTGTCATGGCTGGATTCTCAGACAAA | + |
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Preference number: 5 (lower is better) Translates to: LCMCALMNRVGNLLT*TLSSPSVMAGFSDK Trigger: TTTGTCTGAGAATCCAGCCATGACAGAAGGACTACTGAGTGTCCAAGTAAGTAGATTACCTACCCGGTTCATTAGTGCACACATACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | CTGAAGAGCATGGCCAGTCTGTCCACGATCATAACCAAACGTTTGCCCCGTAAATTCAGGGAGTTGATTTaGTTTCCAACAATTGGGATA | + |
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Preference number: 5 (lower is better) Translates to: LKSMASLSTIITKRLPRKFRELI*FPTIGI Trigger: TATCCCAATTGTTGGAAACAAAATCAACTCCCTGAA...TTTACGGGGCAAACGTTTGGTTATGATCGTGGACAGACTGGCCATGCTCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAAGTATCTTCAGTACAGCCCCTCATATTCATTCACTAGCACTAGAATCCGACGTCCTCACAGACTaGAGGGACGTATATCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: SASIFSTAPHIHSLALESDVLTD*RDVYLY Trigger: ATAAAGATATACGTCCCTCAAGTCTGTGAGGACGTC...GGATTCTAGTGCTAGTGAATGAATATGAGGGGCTGTACTGAAGATACTTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | CCAGGCAAGCGTAAGGGACATGTTTCATTTTTATTCCATGTTACAAGTGAAAATTTCAAAACCTGGACCTaGGTGCTTCCGTTTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGKRKGHVSFLFHVTSENFKTWT*VLPFPS Trigger: GCTGGGAAACGGAAGCACCAAGGTCCAGGTTTTGAA...ATTTTCACTTGTAACATGGAATAAAAATGAAACATGTCCCTTACGCTTGCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAAGTATCTTCAGTACAGCCCCTCATATTCATTCACTAGCACTAGAATCCTTCAGGGAGTTGATTTaGTTTCCAACAATTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SASIFSTAPHIHSLALESFRELI*FPTIGI Trigger: TATCCCAATTGTTGGAAACAAAATCAACTCCCTGAA...GGATTCTAGTGCTAGTGAATGAATATGAGGGGCTGTACTGAAGATACTTGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS-3UTR CAA 90 bp | CAATTTATGCTCAGTACAAATCCAAACGGTAGAAACAGGAACACAAAGAAATCTCTTTGGTTCAGGGAGTaGATTTTGTTTCCAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: QFMLSTNPNGRNRNTKKSLWFRE*ILFPTI Trigger: AATTGTTGGAAACAAAATCAACTCCCTGAACCAAAG...AGATTTCTTTGTGTTCCTGTTTCTACCGTTTGGATTTGTACTGAGCATAAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 |
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| CDS CCA 72 bp | TGGACCTTGGTGCTTCCGTTTCCCAGCAGCAGCAGGTaGAACAGGCCAGCGACGGAGCCGCTGAGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WTLVLPFPSSSR*NRPATEPLSRC Trigger: GCACCTGCTCAGCGGCTCCGTCGCTGGCCTGTTCCACCTGCTGCTGCTGGGAAACGGAAGCACCAAGGTCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 ENSMUST00000148873.8 |
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| CDS GCA 72 bp | CAACTCACGAATAATGGCCTGGTTAGTGGAGAAGGCTaGATTATTTCCCAAGGTGACCAAGGCCTTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QLTNNGLVSGEG*IISQGDQGLFS Trigger: ACTGAAAAGGCCTTGGTCACCTTGGGAAATAATGCAGCCTTCTCCACTAACCAGGCCATTATTCGTGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 ENSMUST00000148873.8 |
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| CDS CCA 72 bp | TGTGCACTAATGAACCGGGTAGGTAATCTACTTACTTaGACACTCAGTAGTCCTTCTGTCATGGCTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: CALMNRVGNLLT*TLSSPSVMAGF Trigger: GAATCCAGCCATGACAGAAGGACTACTGAGTGTCCAAGTAAGTAGATTACCTACCCGGTTCATTAGTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095495.3 |
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| CDS CAA 72 bp | AGAGTTCAGGGGGTCAGCAAAGACGTCCTCACAGACTaGAGGGACGTATATCTTTATCTTAGTTTGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: RVQGVSKDVLTD*RDVYLYLSLIF Trigger: GAAAATCAAACTAAGATAAAGATATACGTCCCTCAAGTCTGTGAGGACGTCTTTGCTGACCCCCTGAACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072896.13 ENSMUST00000095495.3 ENSMUST00000148873.8 |
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