Pregenerated sensors for ARL8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026426Ensembl transcript IDs: ENSMUST00000027684.11, ENSMUST00000125774.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCTGGGGCCAGGAACAGTGACAGTGGGGGTTGCTGGGACGACATaGACCCTGGTCCTCCCTCTTAGACCTGGTTGTACCTGGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: DLGPGTVTVGVAGTT*TLVLPLRPGCTWWP Trigger: GGGCCACCAGGTACAACCAGGTCTAAGAGGGAGGACCAGGGTCCATGTCGTCCCAGCAACCCCCACTGTCACTGTTCCTGGCCCCAGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR GCA 90 bp | AACTTGCCCCACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTaGCCCTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTG | + |
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Preference number: 1 (lower is better) Translates to: NLPHIDPASLSAFPV*PSQVPIGPCSIKWL Trigger: CAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGTGGGGCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR GCA 90 bp | GTACCTGGTGGCCCTATCAAGGCTGGGGACAGAAAAGGAGGCTCCTaGTGGCCTTCAAATTCAGGTCCTCCACTGGGAGACAGAGATACT | + |
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Preference number: 1 (lower is better) Translates to: VPGGPIKAGDRKGGS*WPSNSGPPLGDRDT Trigger: AGTATCTCTGTCTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCCCAGCCTTGATAGGGCCACCAGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CCA 90 bp | CCTGGTGGCCCTATCAAGGCTGGGGACAGAAAAGGAGGCTCCTGCTaGCCTTCAAATTCAGGTCCTCCACTGGGAGACAGAGATACTTTA | + |
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Preference number: 1 (lower is better) Translates to: PGGPIKAGDRKGGSC*PSNSGPPLGDRDTL Trigger: TAAAGTATCTCTGTCTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCCCAGCCTTGATAGGGCCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CCA 90 bp | ACAGAAAAGGAGGCTCCTGCTGGCCTTCAAATTCAGGTCCTCCACTaGGAGACAGAGATACTTTACAGGACATGGGGACAACCACTGCCC | + |
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Preference number: 1 (lower is better) Translates to: TEKEAPAGLQIQVLH*ETEILYRTWGQPLP Trigger: GGGCAGTGGTTGTCCCCATGTCCTGTAAAGTATCTCTGTCTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CCA 90 bp | CAAATTCAGGTCCTCCACTGGGAGACAGAGATACTTTACAGGACATaGGGACAACCACTGCCCTATGTGGCAGTCTCCCCTCTTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: QIQVLHWETEILYRT*GQPLPYVAVSPLLH Trigger: ATGCAGAAGAGGGGAGACTGCCACATAGGGCAGTGGTTGTCCCCATGTCCTGTAAAGTATCTCTGTCTCCCAGTGGAGGACCTGAATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CCA 90 bp | TGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGATTaGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGCTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: CISLCLSSLPLPGPD*PLQHQMVDLSLCLN Trigger: ATTTAAGCAAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGAGGGCCCTCCCCACACTaGGTGAGGAGGAGTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TSTLHLSLPFQFAPPRSRGPSPH*VRRSGL Trigger: AAGCCCACTCCTCCTCACCCAGTGTGGGGAGGGCCC...TCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCGGGCCCTCCCCACACTaGGTGAGGAGGAGTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SLPSSAYELAPHRPCISLGPSPH*VRRSGL Trigger: AAGCCCACTCCTCCTCACCCAGTGTGGGGAGGGCCC...GAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGACAGAAAAGGAGGCTCCTGCTGGCCTTCAAATTCAGGTCCTCCACTGGGAGCCCCACATCGACCCTaGATCTCTCTCTGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GDRKGGSCWPSNSGPPLGAPHRP*ISLCLS Trigger: GGAAAGGCAGAGAGAGATGCAGGGTCGATGTGGGGC...TCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGACAGAAAAGGAGGCTCCTGCTGGCCTTCAAATTCAGGTCCTCCACTGGGAGTCCCGATTGGCCCCTaGAGCATCAAATGGTTGATC | + |
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Preference number: 2 (lower is better) Translates to: GDRKGGSCWPSNSGPPLGVPIGP*SIKWLI Trigger: GATCAACCATTTGATGCTGCAGGGGCCAATCGGGAC...TCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCTCTCCCAGGTCCCGATTaGCCCCTGCAGCATCAAATG | + |
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Preference number: 2 (lower is better) Translates to: VSPLLHMNLPHIDPASLSLPGPD*PLQHQM Trigger: CATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAG...AGAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR TCA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAATGGGGCCAGGAACAGTaGCAGTGGGGGTTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: NQRTNPPMLSSLLVQLCEWGQEQ*QWGLLG Trigger: TCCCAGCAACCCCCACTGTCACTGTTCCTGGCCCCA...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGAAAAGGAGGCTCCTGCTGGCCTTCAAATTCAGGTCCTCCACTGGGAGTTAGGGGACCAGACTTaGGGAGAGGGCAATTATTTT | + |
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Preference number: 2 (lower is better) Translates to: GTEKEAPAGLQIQVLHWELGDQT*GEGNYF Trigger: AAAATAATTGCCCTCTCCCCAAGTCTGGTCCCCTAA...CTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGACCCTGCAGCATCAAATaGTTGATCTTAGTCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TSTLHLSLPFQFAPPRSRPCSIK*LILVFA Trigger: AGCAAAGACTAAGATCAACCATTTGATGCTGCAGGG...TCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR GCA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAACCCTGCATCTCTCTCTaGCTTTCCAGTTTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: NQRTNPPMLSSLLVQLCEPCISL*LSSLPL Trigger: GAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGG...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACAAAACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTGCCCCACATCGACCCTaGATCTCTCTCTGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QTKPKNQPSHAEFSPCTTAPHRP*ISLCLS Trigger: GGAAAGGCAGAGAGAGATGCAGGGTCGATGTGGGGC...AGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTTTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAAAACCACTGCCCTATGTaGCAGTCTCCCCTCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: NQRTNPPMLSSLLVQLCENHCPM*QSPLFC Trigger: GCAGAAGAGGGGAGACTGCCACATAGGGCAGTGGTT...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAAGAACAGAAAATGAGATaGGCCGTGGAGGTGGGGACC | + |
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Preference number: 2 (lower is better) Translates to: NQRTNPPMLSSLLVQLCEEQKMR*AVEVGT Trigger: GGTCCCCACCTCCACGGCCCATCTCATTTTCTGTTC...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCCCCTGCATCTCTCTCTaGCTTTCCAGTTTGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KQNQRTNPPMLSSLLVQLPCISL*LSSLPL Trigger: GAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGG...GAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACAAAACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTAACCACTGCCCTATGTaGCAGTCTCCCCTCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QTKPKNQPSHAEFSPCTTNHCPM*QSPLFC Trigger: GCAGAAGAGGGGAGACTGCCACATAGGGCAGTGGTT...AGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTTTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAATTAGGGGACCAGACTTaGGGAGAGGGCAATTATTTT | + |
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Preference number: 2 (lower is better) Translates to: NQRTNPPMLSSLLVQLCELGDQT*GEGNYF Trigger: AAAATAATTGCCCTCTCCCCAAGTCTGGTCCCCTAA...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR TCA 72 bp | CAACAGGGTGGGCGGGGAGCTCGGCTTCAGGTTAGGTaGCTGTGGTCCCTAGTCAGAAGAAGAGCCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: QQGGRGARLQVR*LWSLVRRRATV Trigger: GACTGTGGCTCTTCTTCTGACTAGGGACCACAGTCACCTAACCTGAAGCCGAGCTCCCCGCCCACCCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR GCA 72 bp | GGCCCTATCAAGGCTGGGGACAGAAAAGGAGGCTCCTaGTGGCCTTCAAATTCAGGTCCTCCACTGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GPIKAGDRKGGS*WPSNSGPPLGD Trigger: GTCTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCCCAGCCTTGATAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR GCA 72 bp | CCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTaGATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PSSAYELAPHRP*ISLCLSSLPLP Trigger: TGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CCA 72 bp | CTTAGACCTGGTTGTACCTGGTGGCCCTATCAAGGCTaGGGACAGAAAAGGAGGCTCCTGCTGGCCTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LRPGCTWWPYQG*GQKRRLLLAFK Trigger: TTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCCCAGCCTTGATAGGGCCACCAGGTACAACCAGGTCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGAGACAATAACAGAGTGTaGAAAGGGGAAGAGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: TSTLHLSLPFQFAPPRSRDNNRV*KGEEEG Trigger: ACCCTCCTCTTCCCCTTTCAACACTCTGTTATTGTC...TCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CCA 72 bp | CTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGATTaGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LCLSSLPLPGPD*PLQHQMVDLSL Trigger: AAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCTGTTAGGGGACCAGACTaGGGGAGAGGGCAATTATTT | + |
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Preference number: 3 (lower is better) Translates to: VSPLLHMNLPHIDPASLSVRGPD*GRGQLF Trigger: AAATAATTGCCCTCTCCCCAAGTCTGGTCCCCTAAC...AGAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGCGTTAGGGGACCAGACTaGGGGAGAGGGCAATTATTT | + |
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Preference number: 3 (lower is better) Translates to: LPGPDWPLQHQMVDLSLCVRGPD*GRGQLF Trigger: AAATAATTGCCCTCTCCCCAAGTCTGGTCCCCTAAC...GCAAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGCGACAATAACAGAGTGTaGAAAGGGGAAGAGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LPGPDWPLQHQMVDLSLCDNNRV*KGEEEG Trigger: ACCCTCCTCTTCCCCTTTCAACACTCTGTTATTGTC...GCAAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR-3UTR CAA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAACTTCTGCATATGAACTaGCCCCACATCGACCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: NQRTNPPMLSSLLVQLCELLHMN*PHIDPA Trigger: TGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAG...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR GCA 90 bp | CTTGCCCCACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCACTTCGGAAACGGGGCTaGCCCCCAATGTCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LAPHRPCISLCLSSLPLPLRKRG*PPMSQS Trigger: GCTCTGGGACATTGGGGGGCAGCCCCGTTTCCGAAG...TGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGTGGGGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR GCA 90 bp | GGGACAGAAAAGGAGGCTCCTGCTGGCCTTCAAATTCAGGTCCTCCACTGGGAGCTTCGGAAACGGGGCTaGCCCCCAATGTCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTEKEAPAGLQIQVLHWELRKRG*PPMSQS Trigger: GCTCTGGGACATTGGGGGGCAGCCCCGTTTCCGAAG...CTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR TCA 90 bp | CCCTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGCAGCCCCACCAGCGTaGGCTCCATTTCCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSQVPIGPCSIKWLILVFAAPPA*APFPPS Trigger: GGAAGGAGGAAATGGAGCTCACGCTGGTGGGGCTGC...AAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027684.11 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGATTGGCCCCTGCAGCTGTGGAGCTCATTCTTaGAGGCCTCGATCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLSAFPVCPSQVPIGPCSCGAHS*RPRSSP Trigger: AGGAGAAGATCGAGGCCTCCAAGAATGAGCTCCACA...GCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGAAAAGGAGGCTCCTGCTGGCCTTCAAATTCAGGTCCTCCACTGGGAGGCCTCGATCTTCTCCTaGTCCGCAGCATCCACCATA | + |
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Preference number: 4 (lower is better) Translates to: GTEKEAPAGLQIQVLHWEASIFS*SAASTI Trigger: TATGGTGGATGCTGCGGATCAGGAGAAGATCGAGGC...CTCCCAGTGGAGGACCTGAATTTGAAGGCCAGCAGGAGCCTCCTTTTCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCTTGGCGCTCACTCCTCTaGAGTAGCGTTCCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: VSPLLHMNLPHIDPASLSWRSLL*SSVPTC Trigger: GCATGTGGGAACGCTACTGCAGAGGAGTGAGCGCCA...AGAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGATTGGCCCCTGCAGCTCTCTTTGCAGGATATaGAGTAGCAGCAGATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLSAFPVCPSQVPIGPCSSLCRI*SSSRSL Trigger: GAGAGATCTGCTGCTACTCCATATCCTGCAAAGAGA...GCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR TCA 90 bp | CTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGCTCCAGAACAGGGCCTTaGACCAGTCCAGCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LPGPDWPLQHQMVDLSLCSRTGP*TSPAAC Trigger: ACAAGCTGCTGGACTGGTTCAAGGCCCTGTTCTGGA...GCAAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027684.11 |
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| CDS-3UTR TCA 90 bp | TTTCCAGTTTGCCCCTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGCTCATTGAACTGTCCTaGCGCGATCACGTTGACGAA | + |
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Preference number: 4 (lower is better) Translates to: FPVCPSQVPIGPCSIKWLLIELS*RDHVDE Trigger: TTCGTCAACGTGATCGCGTCAGGACAGTTCAATGAG...CAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027684.11 |
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| CDS-3UTR CCA 90 bp | TTTCCAGTTTGCCCCTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGTGTGGAGCTCATTCTTaGAGGCCTCGATCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FPVCPSQVPIGPCSIKWLCGAHS*RPRSSP Trigger: AGGAGAAGATCGAGGCCTCCAAGAATGAGCTCCACA...CAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CCA 90 bp | ACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGACAGATCTCTCGGTCCTaGATAGCAGACAGGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: TSTLHLSLPFQFAPPRSRQISRS*IADRFI Trigger: AATGAACCTGTCTGCTATCCAGGACCGAGAGATCTG...TCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| 3UTR CAA 72 bp | CCCTATGTGGCAGTCTCCCCTCTTCTGCATATGAACTaGCCCCACATCGACCCTGCATCTCTCTCTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PYVAVSPLLHMN*PHIDPASLSAF Trigger: AAAGGCAGAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACTGCCACATAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR TCA 90 bp | AGTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCGGATCATGTCCTCATTaGACTGTCCTGACGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: SLPSSAYELAPHRPCISLGSCPH*TVLTRS Trigger: TGATCGCGTCAGGACAGTTCAATGAGGACATGATCC...GAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027684.11 |
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| CDS-3UTR TCA 90 bp | AGTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCCGTGACTTTGAGTGTTaGATAAGCCACTGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLPSSAYELAPHRPCISLRDFEC*ISHCRV Trigger: CACCCTACAGTGGCTTATTCAACACTCAAAGTCACG...GAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR GCA 90 bp | CAAACAAAACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTTGGCGCTCACTCCTCTaGAGTAGCGTTCCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: QTKPKNQPSHAEFSPCTTWRSLL*SSVPTC Trigger: GCATGTGGGAACGCTACTGCAGAGGAGTGAGCGCCA...AGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTTTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR GCA 90 bp | CTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGCTGTTGTCCTTCTCTTTaGAGGATATGGAGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPGPDWPLQHQMVDLSLCCCPSL*RIWSSS Trigger: GCTGCTACTCCATATCCTGCAAAGAGAAGGACAACA...GCAAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CCA 90 bp | AACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCTGTGAACAGATCTCTCGGTCCTaGATAGCAGACAGGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: NQRTNPPMLSSLLVQLCEQISRS*IADRFI Trigger: AATGAACCTGTCTGCTATCCAGGACCGAGAGATCTG...TTCACAGAGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR TCA 90 bp | CAAACAAAACCAAAGAACCAACCCTCCCATGCTGAGTTCTCTCCTTGTACAACTCGTGACTTTGAGTGTTaGATAAGCCACTGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QTKPKNQPSHAEFSPCTTRDFEC*ISHCRV Trigger: CACCCTACAGTGGCTTATTCAACACTCAAAGTCACG...AGTTGTACAAGGAGAGAACTCAGCATGGGAGGGTTGGTTCTTTGGTTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | ACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGACCGGCGAGGTCTCGCTaGTTACCAAGGACTAAGACC | + |
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Preference number: 5 (lower is better) Translates to: TSTLHLSLPFQFAPPRSRPARSR*LPRTKT Trigger: GGTCTTAGTCCTTGGTAACAAGCGAGACCTCGCCGG...TCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | AGTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCCCGGCGAGGTCTCGCTaGTTACCAAGGACTAAGACC | + |
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Preference number: 5 (lower is better) Translates to: SLPSSAYELAPHRPCISLPARSR*LPRTKT Trigger: GGTCTTAGTCCTTGGTAACAAGCGAGACCTCGCCGG...GAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAGTTTGCCCCTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGCCAATGTCCCAGAGCTaGATGGTCACATTCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: FPVCPSQVPIGPCSIKWLPMSQS*MVTFPL Trigger: CAAAGGGAATGTGACCATCAAGCTCTGGGACATTGG...CAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGGGCAAACTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | ACATCGACCCTGCATCTCTCTCTGCCTTTCCAGTTTGCCCCTCCCAGGTCCCGAGGGATCATGTCCTCATaGAACTGTCCTGATCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: TSTLHLSLPFQFAPPRSRGIMSS*NCPDLA Trigger: TGCAAGATCAGGACAGTTCAATGAGGACATGATCCC...TCGGGACCTGGGAGGGGCAAACTGGAAAGGCAGAGAGAGATGCAGGGTCGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCCAGGTCCCGATTGGCCCCTGCAGCATCAAATGGTTGATCTTAGTCTTTGGGATCATGTCCTCATaGAACTGTCCTGACGCGATC | + |
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Preference number: 5 (lower is better) Translates to: PSQVPIGPCSIKWLILVFGIMSS*NCPDAI Trigger: GATCGCGTCAGGACAGTTCAATGAGGACATGATCCC...AAAGACTAAGATCAACCATTTGATGCTGCAGGGGCCAATCGGGACCTGGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027684.11 |
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| CDS-3UTR CAA 90 bp | AGTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCTTGTGGAGCTCATTCTaGGAGGCCTCGATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLPSSAYELAPHRPCISLLWSSF*EASIFS Trigger: GGAGAAGATCGAGGCCTCCAAGAATGAGCTCCACAA...GAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS CCA 90 bp | TGCCTTGTAGCTGTGGCTTGTCTAGCAGGTTGTGGAGCTCATTCTTaGAGGCCTCGATCTTCTCCTGATCCGCAGCATCCACCATATACA | + |
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Preference number: 5 (lower is better) Translates to: CLVAVACLAGCGAHS*RPRSSPDPQHPPYT Trigger: TGTATATGGTGGATGCTGCGGATCAGGAGAAGATCGAGGCCTCCAAGAATGAGCTCCACAACCTGCTAGACAAGCCACAGCTACAAGGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCTCCAATGTCCCAGAGCTaGATGGTCACATTCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VSPLLHMNLPHIDPASLSPMSQS*MVTFPL Trigger: CAAAGGGAATGTGACCATCAAGCTCTGGGACATTGG...AGAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS-3UTR CAA 90 bp | AGTCTCCCCTCTTCTGCATATGAACTTGCCCCACATCGACCCTGCATCTCTCTCATGGTCACATTCCCTTaGGTGATTTTTCGCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: SLPSSAYELAPHRPCISLMVTFP*VIFRML Trigger: CAACATGCGAAAAATCACCAAAGGGAATGTGACCAT...GAGAGAGATGCAGGGTCGATGTGGGGCAAGTTCATATGCAGAAGAGGGGAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS CAA 72 bp | AGCTCCTTCTCATCTAGCGCTCCGGCGAGGTCTCGCTaGTTACCAAGGACTAAGACCGGGATGCCTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSFSSSAPARSR*LPRTKTGMPCS Trigger: GCTACAAGGCATCCCGGTCTTAGTCCTTGGTAACAAGCGAGACCTCGCCGGAGCGCTAGATGAGAAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS CCA 72 bp | GCTGTGGCTTGTCTAGCAGGTTGTGGAGCTCATTCTTaGAGGCCTCGATCTTCTCCTGATCCGCAGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: AVACLAGCGAHS*RPRSSPDPQHP Trigger: TGGATGCTGCGGATCAGGAGAAGATCGAGGCCTCCAAGAATGAGCTCCACAACCTGCTAGACAAGCCACAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS CAA 72 bp | CCAAGGACTAAGACCGGGATGCCTTGTAGCTGTGGCTaGTCTAGCAGGTTGTGGAGCTCATTCTTGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRTKTGMPCSCG*SSRLWSSFLEA Trigger: GGCCTCCAAGAATGAGCTCCACAACCTGCTAGACAAGCCACAGCTACAAGGCATCCCGGTCTTAGTCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS CAA 90 bp | TTCTCGATTAGCTCCTTCTCATCTAGCGCTCCGGCGAGGTCTCGCTaGTTACCAAGGACTAAGACCGGGATGCCTTGTAGCTGTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSISSFSSSAPARSR*LPRTKTGMPCSCGL Trigger: CAAGCCACAGCTACAAGGCATCCCGGTCTTAGTCCTTGGTAACAAGCGAGACCTCGCCGGAGCGCTAGATGAGAAGGAGCTAATCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS GCA 72 bp | CGAGGTCTCGCTTGTTACCAAGGACTAAGACCGGGATaGCTTGTAGCTGTGGCTTGTCTAGCAGGTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RGLACYQGLRPG*LVAVACLAGCG Trigger: TCCACAACCTGCTAGACAAGCCACAGCTACAAGGCATCCCGGTCTTAGTCCTTGGTAACAAGCGAGACCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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| CDS CAA 90 bp | TCCCAGAGCTTGATGGTCACATTCCCTTTGGTGATTTTTCGCATGTaGAAACCCACAGTGGGGATCATGTCCTCATTGAACTGTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SQSLMVTFPLVIFRM*KPTVGIMSSLNCPD Trigger: GTCAGGACAGTTCAATGAGGACATGATCCCCACTGTGGGTTTCAACATGCGAAAAATCACCAAAGGGAATGTGACCATCAAGCTCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027684.11 |
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| CDS CAA 90 bp | GTGATTTTTCGCATGTTGAAACCCACAGTGGGGATCATGTCCTCATaGAACTGTCCTGATCTTGCAACTTCTGAGCCAAGTGGAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VIFRMLKPTVGIMSS*NCPDLATSEPSGVS Trigger: GGAGACTCCACTTGGCTCAGAAGTTGCAAGATCAGGACAGTTCAATGAGGACATGATCCCCACTGTGGGTTTCAACATGCGAAAAATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125774.2 |
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| CDS CAA 90 bp | TCCCAGAGCTTGATGGTCACATTCCCTTTGGTGATTTTTCGCATGTaGAAACCCACAGTGGGGATCATGTCCTCATTGAACTGTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SQSLMVTFPLVIFRM*KPTVGIMSSLNCPD Trigger: ATCAGGACAGTTCAATGAGGACATGATCCCCACTGTGGGTTTCAACATGCGAAAAATCACCAAAGGGAATGTGACCATCAAGCTCTGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125774.2 |
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| CDS CAA 72 bp | TTGATGGTCACATTCCCTTTGGTGATTTTTCGCATGTaGAAACCCACAGTGGGGATCATGTCCTCATTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LMVTFPLVIFRM*KPTVGIMSSLN Trigger: GTTCAATGAGGACATGATCCCCACTGTGGGTTTCAACATGCGAAAAATCACCAAAGGGAATGTGACCATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027684.11 ENSMUST00000125774.2 |
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