Pregenerated sensors for ARL6IP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029404Ensembl transcript IDs: ENSMUST00000031351.11, ENSMUST00000122394.8, ENSMUST00000145667.2, ENSMUST00000149835.2, ENSMUST00000196401.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTaGGCTGTAGGAAAGGCACCTGGACCTATTAGTCTCCAAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: LLSNLLSNPLHPRGC*AVGKAPGPISLQVT Trigger: GGTGACTTGGAGACTAATAGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| 3UTR GCA 72 bp | TCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATaGTGGGCTGTAGGAAAGGCACCTGGACCTATTAGT | + |
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Preference number: 3 (lower is better) Translates to: SNLLSNPLHPRG*WAVGKAPGPIS Trigger: ACTAATAGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| 3UTR CCA 72 bp | AATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTaGGCTGTAGGAAAGGCACCTGGACCTATTAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: NLLSNPLHPRGC*AVGKAPGPISL Trigger: GAGACTAATAGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| 3UTR GCA 72 bp | CAAGATCATTTAATAGTGACACTCTGCTGTCCAATTTaGTGTCCAATCCACTGCACCCAAGAGGATGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QDHLIVTLCCPI*CPIHCTQEDAG Trigger: CCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAATGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS-3UTR TCA 90 bp | TTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCGTGCCACTGATCCAGTaGGGGGCCGGGCAGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FAVQSTAPKRMLGCRKGTVPLIQ*GAGQSL Trigger: GAGGCTCTGCCCGGCCCCTCACTGGATCAGTGGCAC...GGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR TCA 90 bp | GCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGGCTGATCTGTGCCACTaGTCCAGTGAGGGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: AVQFAVQSTAPKRMLGCRADLCH*SSEGPG Trigger: GCCCGGCCCCTCACTGGATCAGTGGCACAGATCAGC...CCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR GCA 90 bp | GCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCTGGTCTGGGCCTTGTGCTTaGTTCTCTCCTCAACCCCGG | + |
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Preference number: 4 (lower is better) Translates to: AVQSTAPKRMLGCRKGTWSGPCA*FSPQPR Trigger: CCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGA...CCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CCA 90 bp | AATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCAGCGCTGCCAGCCTTGTaGCCCTGGGATCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLLSNPLHPRGCWAVGKAALPAL*PWDLEA Trigger: AGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGC...TGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR TCA 90 bp | TCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCTGGACCTATTGTCCTCCCCAGCTaGTCTGTGCCACTGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: SNPLHPRGCWAVGKAPGPIVLPS*SVPLIQ Trigger: CTGGATCAGTGGCACAGATCAGCTGGGGAGGACAAT...AGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR GCA 90 bp | GTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCTGGACCTCCCCTCGGGTGGCTTaGTTGTTGATCTCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VQSTAPKRMLGCRKGTWTSPRVA*LLISLC Trigger: ACACAGAGAGATCAACAAGCAAGCCACCCGAGGGGA...GGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CCA 90 bp | CTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTATCTTCCGGCCATCACTaGAGGATGAGGACGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSNLLSNPLHPRGCWAVSSGHH*RMRTRR Trigger: CCGCCTCGTCCTCATCCTCCAGTGATGGCCGGAAGA...TACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR GCA 90 bp | AATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACACTACGGGACCGACTaGGACTTCTCGAGCGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NLLSNPLHPRGCWAVGKAHYGTD*DFSSAF Trigger: GAAAGCGCTCGAGAAGTCGCAGTCGGTCCCGTAGTG...TGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR GCA 90 bp | TCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTCTGGTGCACCGCCACTaGCTTCTCCTTGACTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SAVQFAVQSTAPKRMLGCLVHRH*LLLDSL Trigger: AAGAGAGTCAAGGAGAAGGCAGTGGCGGTGCACCAG...ACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR GCA 90 bp | TCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCTGGACCTTGGATACGAGACTTCTaGTCATCTGTCAGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: SNPLHPRGCWAVGKAPGPWIRDF*SSVRTG Trigger: CCCAGTCCTGACAGATGAGCAGAAGTCTCGTATCCA...AGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CCA 90 bp | ACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTTGTGCGTCCTGTCTCTaGGTCCACCACCTTTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: TLLSNLLSNPLHPRGCWACASCL*VHHLSN Trigger: ATTCGAAAGGTGGTGGACCCAGAGACAGGACGCACA...AGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCTGGATGGCAACCTTGTTaGTCTCTCTGTGTCGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLSNPLHPRGCWAVGKAPGWQPC*SLCVVL Trigger: AAGAACGACACAGAGAGATCAACAAGGTTGCCATCC...AGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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| CDS-3UTR CCA 90 bp | CACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCATGGGTTTCATGGCCTaGATACGAGACTTCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HSAVQFAVQSTAPKRMLGMGFMA*IRDFCS Trigger: TGAGCAGAAGTCTCGTATCCAGGCCATGAAACCCAT...GCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CCA 90 bp | TCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCTGGACCTCTCTGTGTCGTTCTTTaGTTACGATTTCCTCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: SNPLHPRGCWAVGKAPGPLCVVL*LRFPLK Trigger: TTTTAGAGGAAATCGTAACCAAAGAACGACACAGAG...AGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS-3UTR GCA 90 bp | TTTAATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGACTCTTCTTCTCCTTGTaGTTCGCTCGCTTCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FNSDTLLSNLLSNPLHPRLFFSL*FARFFR Trigger: CCGGAAGAAGCGAGCGAAGCACAAGGAGAAGAAGAG...TCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CCA 90 bp | TTTAATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGATGTGCGTCCTGTCTCTaGGTCCACCACCTTTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: FNSDTLLSNLLSNPLHPRCASCL*VHHLSN Trigger: ATTCGAAAGGTGGTGGACCCAGAGACAGGACGCACA...TCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS-3UTR TCA 90 bp | TCATTTAATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAGGGTGGCTTGCTTGTTaGTCTCTCTGTGTCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFNSDTLLSNLLSNPLHPGWLAC*SLCVVL Trigger: AAGAACGACACAGAGAGATCAACAAGCAAGCCACCC...TGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| 3UTR CAA 72 bp | CCAAGATCATTTAATAGTGACACTCTGCTGTCCAATTaGCTGTCCAATCCACTGCACCCAAGAGGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PRSFNSDTLLSN*LSNPLHPRGCW Trigger: CCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAATGATCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS-3UTR CCA 90 bp | GATCATTTAATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCTCTGTGTCGTTCTTTaGTTACGATTTCCTCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: DHLIVTLCCPICCPIHCTLCVVL*LRFPLK Trigger: TTTTAGAGGAAATCGTAACCAAAGAACGACACAGAG...GGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAATGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS TCA 90 bp | GTCAGGACTGGGCCATCATTGTCCTCCCCAGCTGATCTGTGCCACTaGTCCAGTGAGGGGCCGGGCAGAGCCTCGGCCTGGTGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: VRTGPSLSSPADLCH*SSEGPGRASAWCTA Trigger: GGCGGTGCACCAGGCCGAGGCTCTGCCCGGCCCCTCACTGGATCAGTGGCACAGATCAGCTGGGGAGGACAATGATGGCCCAGTCCTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS CCA 90 bp | TCTCCTCAACCCCGGAGGCGCTGCCAGCCTTGTGGCCCTGGGATCTaGAGGCTGAACAGTTCCTCGAGGCATCCTTGCTACTCCTCTTAC | + |
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Preference number: 5 (lower is better) Translates to: SPQPRRRCQPCGPGI*RLNSSSRHPCYSSY Trigger: GTAAGAGGAGTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CCA 90 bp | TTGCTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCCTTGTGGCCCTaGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCCTTGCTACTC | + |
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Preference number: 5 (lower is better) Translates to: LLLSSTPEALPALWP*DLEAEQFLEASLLL Trigger: GAGTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CCA 90 bp | TTGTGCTTGCTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCCTTGTaGCCCTGGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LCLLLSSTPEALPAL*PWDLEAEQFLEASL Trigger: CAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAAGCACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS TCA 90 bp | TCGCGATGTCCTCTGGGCCTTGTGCTTGCTTCTCTTTCGCTTTTCTaGCCCTCGCCGACCACTACGGGACCGACTGCGACTTCTCGAGCG | + |
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Preference number: 5 (lower is better) Translates to: SRCPLGLVLASLSLF*PSPTTTGPTATSRA Trigger: CGCTCGAGAAGTCGCAGTCGGTCCCGTAGTGGTCGGCGAGGGTCAGAAAAGCGAAAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122394.8 |
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| CDS CCA 90 bp | GAAGAACTGGAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTaGGCCTTGTGCTTGCTTCTCTCCTCAACCCCGGAGGCGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: EELEEEEVELDRDVL*ALCLLLSSTPEALP Trigger: TGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTCCAGTTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS TCA 90 bp | ACAGTTCCTCGAGGCATCCTTGCTACTCCTCTTACTTCGCTTTTCTaGCCCTCGCCGACCACTACGGGACCGACTGCGACTTCTCGAGCG | + |
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Preference number: 5 (lower is better) Translates to: TVPRGILATPLTSLF*PSPTTTGPTATSRA Trigger: CGCTCGAGAAGTCGCAGTCGGTCCCGTAGTGGTCGGCGAGGGTCAGAAAAGCGAAGTAAGAGGAGTAGCAAGGATGCCTCGAGGAACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS GCA 90 bp | TGTGGCCCTGGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCCTTaGTACTCCTCTTACTTCGCTTTTCTGACCCTCGCCGACCACTAC | + |
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Preference number: 5 (lower is better) Translates to: CGPGIWRLNSSSRHP*YSSYFAFLTLADHY Trigger: GTAGTGGTCGGCGAGGGTCAGAAAAGCGAAGTAAGAGGAGTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS-3UTR CAA 90 bp | AATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGAGAGGCGCTGCCAGCCTaGTGGCCCTGGGATCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: NSDTLLSNLLSNPLHPRGEALPA*WPWDLE Trigger: CTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTC...TCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | GCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAGGACTGGGCCATCATaGTCCTCCCCAGCTGATCTG | + |
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Preference number: 5 (lower is better) Translates to: AVQFAVQSTAPKRMLGCRRTGPS*SSPADL Trigger: CAGATCAGCTGGGGAGGACAATGATGGCCCAGTCCT...CCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | TTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCACCCCTCGGGTGGCTTGCTaGTTGATCTCTCTGTGTCGT | + |
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Preference number: 5 (lower is better) Translates to: FAVQSTAPKRMLGCRKGTPRVAC*LISLCR Trigger: ACGACACAGAGAGATCAACAAGCAAGCCACCCGAGG...GGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS TCA 90 bp | AACTGGATCGCGATGTCCTCTGGGCCTTGTGCTTGCTTCTCTCTGTaGTGCAGGGAGAAGGTAAGGCCTTTGTGCCCTGCTCTAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: NWIAMSSGPCACFSL*CREKVRPLCPALVV Trigger: TACCACTAGAGCAGGGCACAAAGGCCTTACCTTCTCCCTGCATCACAGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS GCA 90 bp | TTGCTTCTCTCTGTGATGCAGGGAGAAGGTAAGGCCTTTGTGCCCTaGTCTAGTGGTAGGGACCCTCCCAATGGGCTCTCCAAGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: LLLSVMQGEGKAFVP*SSGRDPPNGLSKRT Trigger: TGTTCTCTTGGAGAGCCCATTGGGAGGGTCCCTACCACTAGAGCAGGGCACAAAGGCCTTACCTTCTCCCTGCATCACAGAGAGAAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS GCA 90 bp | GAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTTGTaGTTGCTTCTCTCTGTGATGCAGGGAGAAGGTAAGGCCTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: EEEEVELDRDVLWAL*LLLSVMQGEGKAFV Trigger: CACAAAGGCCTTACCTTCTCCCTGCATCACAGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS CCA 90 bp | CTCTGTCGGGCATCCCACTCCTCCTTTGTCATGGGTTTCATGGCCTaGATACGAGACTTCTGCTCATCTGTCAGGACTGGGCCATCATTG | + |
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Preference number: 5 (lower is better) Translates to: LCRASHSSFVMGFMA*IRDFCSSVRTGPSL Trigger: CAATGATGGCCCAGTCCTGACAGATGAGCAGAAGTCTCGTATCCAGGCCATGAAACCCATGACAAAGGAGGAGTGGGATGCCCGACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS-3UTR CAA 90 bp | GCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGCGGGTGGCTTGCTTGTaGATCTCTCTGTGTCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: AVQFAVQSTAPKRMLGCRRVACL*ISLCRS Trigger: AGAACGACACAGAGAGATCAACAAGCAAGCCACCCG...CCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | GCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGCCTGGGATGGCAACCTaGTTGATCTCTCTGTGTCGT | + |
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Preference number: 5 (lower is better) Translates to: AVQFAVQSTAPKRMLGCRPGMAT*LISLCR Trigger: ACGACACAGAGAGATCAACAAGGTTGCCATCCCAGG...CCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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| CDS CCA 90 bp | GAAGAACTGGAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTaGGCCTTGTGCTTGCTTCTCTCTGTGATGCAGGGAGAAGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: EELEEEEVELDRDVL*ALCLLLSVMQGEGK Trigger: CTTACCTTCTCCCTGCATCACAGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTCCAGTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTTTCCTCTTCTTCTCCTaGTGCTTCGCTCGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SAVQFAVQSTAPKRMLGCFLFFS*CFARFF Trigger: GAAGAAGCGAGCGAAGCACAAGGAGAAGAAGAGGAA...ACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | AATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGAGATGTCCTCTGGGCCTaGTGCTTGCTTCTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: NSDTLLSNLLSNPLHPRGDVLWA*CLLLSS Trigger: TGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATC...TCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | AATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTAGGAAAGGCAGGGATGGCAACCTTGTaGATCTCTCTGTGTCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: NLLSNPLHPRGCWAVGKAGMATL*ISLCRS Trigger: AGAACGACACAGAGAGATCAACAAGGTTGCCATCCC...TGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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| CDS-3UTR CAA 90 bp | ATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATCATCCCACTCCTCCTTaGTCATGGGTTTCATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IVTLCCPICCPIHCTQEDHPTPP*SWVSWP Trigger: AGGCCATGAAACCCATGACAAAGGAGGAGTGGGATG...ATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | CTCTGCTGTCCAATTTGCTGTCCAATCCACTGCACCCAAGAGGATGCTGGGCTGTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: LCCPICCPIHCTQEDAGLSLCRS*VTISSK Trigger: TTTAGAGGAAATCGTAACCAAAGAACGACACAGAGA...CAGCCCAGCATCCTCTTGGGTGCAGTGGATTGGACAGCAAATTGGACAGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS-3UTR CAA 90 bp | CCAAGATCATTTAATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGTGGAAGAGGAGGAGGTaGAACTGGATCGCGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: PRSFNSDTLLSNLLSNPLWKRRR*NWIAMS Trigger: GGACATCGCGATCCAGTTCAACCTCCTCCTCTTCCA...CAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAATGATCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031351.11 |
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| CDS-3UTR CAA 90 bp | CAAGATCATTTAATAGTGACACTCTGCTGTCCAATTTGCTGTCCAATCCACTGCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: QDHLIVTLCCPICCPIHCSLCRS*VTISSK Trigger: TTTAGAGGAAATCGTAACCAAAGAACGACACAGAGA...GCAGTGGATTGGACAGCAAATTGGACAGCAGAGTGTCACTATTAAATGATCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000196401.2 |
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| CDS CCA 72 bp | CCCCGGAGGCGCTGCCAGCCTTGTGGCCCTGGGATCTaGAGGCTGAACAGTTCCTCGAGGCATCCTTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: PRRRCQPCGPGI*RLNSSSRHPCY Trigger: GTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CCA 72 bp | CTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCCTTGTaGCCCTGGGATCTGGAGGCTGAACAGTTCCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLSSTPEALPAL*PWDLEAEQFLE Trigger: CTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 90 bp | GCCTTGTGCTTGCTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCCTaGTGGCCCTGGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: ALCLLLSSTPEALPA*WPWDLEAEQFLEAS Trigger: GGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAAGCACAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 72 bp | TTGCTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCCTaGTGGCCCTGGGATCTGGAGGCTGAACAGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLLSSTPEALPA*WPWDLEAEQFL Trigger: GAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 72 bp | GTTGAACTGGATCGCGATGTCCTCTGGGCCTTGTGCTaGCTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VELDRDVLWALC*LLSSTPEALPA Trigger: GGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 90 bp | CTGGAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTaGTGCTTGCTTCTCTCCTCAACCCCGGAGGCGCTGCCAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LEEEEVELDRDVLWA*CLLLSSTPEALPAL Trigger: CAAGGCTGGCAGCGCCTCCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS GCA 72 bp | GCTTTTCTGACCCTCGCCGACCACTACGGGACCGACTaGGACTTCTCGAGCGCTTTCGAGAGCCAACGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFLTLADHYGTD*DFSSAFESQRE Trigger: CTCACGTTGGCTCTCGAAAGCGCTCGAGAAGTCGCAGTCGGTCCCGTAGTGGTCGGCGAGGGTCAGAAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000149835.2 |
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| CDS GCA 72 bp | GGGGCCGGGCAGAGCCTCGGCCTGGTGCACCGCCACTaGCTTCTCCTTGACTCTCTTCTTCAACTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GAGQSLGLVHRH*LLLDSLLQLLL Trigger: AAGAAGAAGTTGAAGAAGAGAGTCAAGGAGAAGGCAGTGGCGGTGCACCAGGCCGAGGCTCTGCCCGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS CAA 72 bp | GAGGAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTaGTGCTTGCTTCTCTCCTCAACCCCGGAGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: EEVELDRDVLWA*CLLLSSTPEAL Trigger: CAGCGCCTCCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS TCA 72 bp | CCTCTGGGCCTTGTGCTTGCTTCTCTTTCGCTTTTCTaGCCCTCGCCGACCACTACGGGACCGACTGCGACT | + |
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Preference number: 6 (lower is better) Translates to: PLGLVLASLSLF*PSPTTTGPTAT Trigger: AGTCGCAGTCGGTCCCGTAGTGGTCGGCGAGGGTCAGAAAAGCGAAAGAGAAGCAAGCACAAGGCCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122394.8 |
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| CDS CCA 72 bp | GCCGTCTCCCTTGATGAGCCTTGTGCGTCCTGTCTCTaGGTCCACCACCTTTCGAATAACGCTCTGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: AVSLDEPCASCL*VHHLSNNALSG Trigger: GCCCGACAGAGCGTTATTCGAAAGGTGGTGGACCCAGAGACAGGACGCACAAGGCTCATCAAGGGAGACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 ENSMUST00000196401.2 |
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| CDS TCA 72 bp | GTGCTTCGCTCGCTTCTTCCGGCCATCACTGGAGGATaGGGACGAGGCGGAGCTAGAAGAACTGGAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VLRSLLPAITGG*GRGGARRTGRG Trigger: TCCTCTTCCAGTTCTTCTAGCTCCGCCTCGTCCTCATCCTCCAGTGATGGCCGGAAGAAGCGAGCGAAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 ENSMUST00000149835.2 |
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| CDS GCA 72 bp | TCTGTGATGCAGGGAGAAGGTAAGGCCTTTGTGCCCTaGTCTAGTGGTAGGGACCCTCCCAATGGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SVMQGEGKAFVP*SSGRDPPNGLS Trigger: GGAGAGCCCATTGGGAGGGTCCCTACCACTAGAGCAGGGCACAAAGGCCTTACCTTCTCCCTGCATCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS CCA 72 bp | GAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTaGGCCTTGTGCTTGCTTCTCTCCTCAACCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: EEEEVELDRDVL*ALCLLLSSTPE Trigger: CTCCGGGGTTGAGGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 90 bp | TTGTGGCCCTGGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCCTaGCTACTCCTCTTACTTCGCTTTTCTGACCCTCGCCGACCACTA | + |
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Preference number: 6 (lower is better) Translates to: LWPWDLEAEQFLEAS*LLLLLRFSDPRRPL Trigger: TAGTGGTCGGCGAGGGTCAGAAAAGCGAAGTAAGAGGAGTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 90 bp | CTGGAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTaGTGCTTGCTTCTCTTTCGCTTTTCTGACCCTCGCCGACCACTA | + |
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Preference number: 6 (lower is better) Translates to: LEEEEVELDRDVLWA*CLLLFRFSDPRRPL Trigger: TAGTGGTCGGCGAGGGTCAGAAAAGCGAAAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122394.8 |
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| CDS GCA 72 bp | GGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCCTTaGTACTCCTCTTACTTCGCTTTTCTGACCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: GIWRLNSSSRHP*YSSYFAFLTLA Trigger: GGCGAGGGTCAGAAAAGCGAAGTAAGAGGAGTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS GCA 72 bp | GAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTTGTaGTTGCTTCTCTTTCGCTTTTCTGACCCTCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: EVELDRDVLWAL*LLLFRFSDPRR Trigger: TCGGCGAGGGTCAGAAAAGCGAAAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122394.8 |
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| CDS CCA 72 bp | GAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTaGGCCTTGTGCTTGCTTCTCTCTGTGATGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: EEEEVELDRDVL*ALCLLLSVMQG Trigger: TCCCTGCATCACAGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS CAA 72 bp | GAGGAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTaGTGCTTGCTTCTCTTTCGCTTTTCTGACCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: EEVELDRDVLWA*CLLLFRFSDPR Trigger: GCGAGGGTCAGAAAAGCGAAAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122394.8 |
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| CDS CAA 90 bp | CTGGAAGAGGAGGAGGTTGAACTGGATCGCGATGTCCTCTGGGCCTaGTGCTTGCTTCTCTCTGTGATGCAGGGAGAAGGTAAGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LEEEEVELDRDVLWA*CLLLSVMQGEGKAF Trigger: AAAGGCCTTACCTTCTCCCTGCATCACAGAGAGAAGCAAGCACAAGGCCCAGAGGACATCGCGATCCAGTTCAACCTCCTCCTCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS CCA 72 bp | GCATCCCACTCCTCCTTTGTCATGGGTTTCATGGCCTaGATACGAGACTTCTGCTCATCTGTCAGGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASHSSFVMGFMA*IRDFCSSVRTG Trigger: CCCAGTCCTGACAGATGAGCAGAAGTCTCGTATCCAGGCCATGAAACCCATGACAAAGGAGGAGTGGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS CCA 72 bp | GTCGGGCATCCCACTCCTCCTTTGTCATGGGTTTCATaGCCTGGATACGAGACTTCTGCTCATCTGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VGHPTPPLSWVS*PGYETSAHLSG Trigger: TCCTGACAGATGAGCAGAAGTCTCGTATCCAGGCCATGAAACCCATGACAAAGGAGGAGTGGGATGCCCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS CAA 72 bp | TGGGATCTGGAGGCTGAACAGTTCCTCGAGGCATCCTaGCTACTCCTCTTACTTCGCTTTTCTGACCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: WDLEAEQFLEAS*LLLLLRFSDPR Trigger: GCGAGGGTCAGAAAAGCGAAGTAAGAGGAGTAGCAAGGATGCCTCGAGGAACTGTTCAGCCTCCAGATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031351.11 ENSMUST00000149835.2 |
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| CDS CAA 72 bp | TTGGTTACGATTTCCTCTAAAACCTCGCCGTCTCCCTaGATGAGCCTTGTGCGTCCTGTCTCTGGGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LVTISSKTSPSP*MSLVRPVSGST Trigger: GGTGGACCCAGAGACAGGACGCACAAGGCTCATCAAGGGAGACGGCGAGGTTTTAGAGGAAATCGTAACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 ENSMUST00000196401.2 |
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| CDS CAA 90 bp | GGACCCTCCCAATGGGCTCTCCAAGAGAACATCTGGAACCTTCTTTaGGGTTCTAGAAGTCACTATGTGCCTGGCAGGATCCTGACCACG | + |
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Preference number: 6 (lower is better) Translates to: GPSQWALQENIWNLL*GSRSHYVPGRILTT Trigger: CGTGGTCAGGATCCTGCCAGGCACATAGTGACTTCTAGAACCCAAAAGAAGGTTCCAGATGTTCTCTTGGAGAGCCCATTGGGAGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS CAA 90 bp | CCATCCCCTCGGGTGGCTTGCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAAAACCTCGCCGTCTCCCTTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSPRVACLLISLCRS*VTISSKTSPSPLMS Trigger: GCTCATCAAGGGAGACGGCGAGGTTTTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGCAAGCCACCCGAGGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS GCA 72 bp | TTTGTCATGGGTTTCATGGCCTGGATACGAGACTTCTaGTCATCTGTCAGGACTGGGCCATCATTGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FVMGFMAWIRDF*SSVRTGPSLSS Trigger: GGAGGACAATGATGGCCCAGTCCTGACAGATGAGCAGAAGTCTCGTATCCAGGCCATGAAACCCATGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS CAA 72 bp | CGGGTGGCTTGCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAAAACCTCGCCGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RVACLLISLCRS*VTISSKTSPSP Trigger: GGGAGACGGCGAGGTTTTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGCAAGCCACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031351.11 ENSMUST00000122394.8 ENSMUST00000145667.2 |
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| CDS CAA 90 bp | CACAAACCTGGGATGGCAACCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAAAACCTCGCCGTCTCCCTTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: HKPGMATLLISLCRS*VTISSKTSPSPLMS Trigger: GCTCATCAAGGGAGACGGCGAGGTTTTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTTGCCATCCCAGGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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| CDS CAA 72 bp | CAATGGGCTCTCCAAGAGAACATCTGGAACCTTCTTTaGGGTTCTAGAAGTCACTATGTGCCTGGCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: QWALQENIWNLL*GSRSHYVPGRI Trigger: GATCCTGCCAGGCACATAGTGACTTCTAGAACCCAAAAGAAGGTTCCAGATGTTCTCTTGGAGAGCCCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145667.2 |
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| CDS CAA 72 bp | CCAACAGCAGTTCACAAACCTGGGATGGCAACCTTGTaGATCTCTCTGTGTCGTTCTTTGGTTACGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PTAVHKPGMATL*ISLCRSLVTIS Trigger: GGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTTGCCATCCCAGGTTTGTGAACTGCTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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| CDS TCA 72 bp | CAACAGCAGTTCACAAACCTGGGATGGCAACCTTGTTaGTCTCTCTGTGTCGTTCTTTGGTTACGATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QQQFTNLGWQPC*SLCVVLWLRFP Trigger: AGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTTGCCATCCCAGGTTTGTGAACTGCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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| CDS CAA 72 bp | TCACCAACAGCAGTTCACAAACCTGGGATGGCAACCTaGTTGATCTCTCTGTGTCGTTCTTTGGTTACGATT | + |
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Preference number: 6 (lower is better) Translates to: SPTAVHKPGMAT*LISLCRSLVTI Trigger: AATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTTGCCATCCCAGGTTTGTGAACTGCTGTTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196401.2 |
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