Pregenerated sensors for ARL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022722Ensembl transcript IDs: ENSMUST00000023405.16, ENSMUST00000099646.10, ENSMUST00000118438.8, ENSMUST00000149797.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAATAAATTGATTCCCGTGAAGGCAAGGGATGCATTACATGTATaGCCTGATCACCACCCAGACCTTCACAGTTGTGAACAACACGCA | + |
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Preference number: 1 (lower is better) Translates to: LNKLIPVKARDALHV*PDHHPDLHSCEQHA Trigger: TGCGTGTTGTTCACAACTGTGAAGGTCTGGGTGGTGATCAGGTCATACATGTAATGCATCCCTTGCCTTCACGGGAATCAATTTATTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGGTTGCAGATTCCATTCATTaGAAAATCACTGAGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LKPLKRSSRVHQSKQNVVADSIH*KITEVS Trigger: GGAGACCTCAGTGATTTTTCAATGAATGGAATCTGC...AACCACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAAGCAGATTCCATTCATTaGAAAATCACTGAGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SSPKALKTFFQSPPKQAEADSIH*KITEVS Trigger: GGAGACCTCAGTGATTTTTCAATGAATGGAATCTGC...TTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGCAGATTCCATTCATTaGAAAATCACTGAGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPKALKTFFQSPPKQAECADSIH*KITEVS Trigger: GGAGACCTCAGTGATTTTTCAATGAATGGAATCTGC...ACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| 3UTR TCA 72 bp | AACAACACGCACACATGCAGGTGTCAGGGCAAGGCCTaGGCAGAAAGGACAGAACCCTTCATCAGGCACCGA | + |
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Preference number: 3 (lower is better) Translates to: NNTHTCRCQGKA*AERTEPFIRHR Trigger: TCGGTGCCTGATGAAGGGTTCTGTCCTTTCTGCTCAGGCCTTGCCCTGACACCTGCATGTGTGCGTGTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| 3UTR TCA 72 bp | TTGATTCCCGTGAAGGCAAGGGATGCATTACATGTATaGCCTGATCACCACCCAGACCTTCACAGTTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: LIPVKARDALHV*PDHHPDLHSCE Trigger: TTCACAACTGTGAAGGTCTGGGTGGTGATCAGGTCATACATGTAATGCATCCCTTGCCTTCACGGGAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| 3UTR TCA 72 bp | AGAAAGGACAGAACCCTTCATCAGGCACCGAGGAAATaGATTCAGTTTAGTTGGCCTTGGAAAATATTTGGC | + |
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Preference number: 3 (lower is better) Translates to: RKDRTLHQAPRK*IQFSWPWKIFG Trigger: GCCAAATATTTTCCAAGGCCAACTAAACTGAATTCATTTCCTCGGTGCCTGATGAAGGGTTCTGTCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| CDS-3UTR TCA 90 bp | GTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGCAGGCCAAGCAAACCTaGAAGTCTGTCCAGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLKRSSRVHQSKQNVQAKQT*KSVQQA Trigger: GGCTTGCTGGACAGACTTTCAGGTTTGCTTGGCCTG...CACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | ATCACCACCCAGACCTTCACAGTTGTGAACAACACGCACACATGCAGGTGTCAGTCTAAGCACAGCAACTaGGACACTTTCACAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: ITTQTFTVVNNTHTCRCQSKHSN*DTFTEV Trigger: GACCTCTGTGAAAGTGTCTCAGTTGCTGTGCTTAGA...CTGACACCTGCATGTGTGCGTGTTGTTCACAACTGTGAAGGTCTGGGTGGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| CDS-3UTR TCA 90 bp | AGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTCAGGCCAAGCAAACCTaGAAGTCTGTCCAGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPKALKTFFQSPPKQAECQAKQT*KSVQQA Trigger: GGCTTGCTGGACAGACTTTCAGGTTTGCTTGGCCTG...ACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR GCA 90 bp | GTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCCAGTCCACGCCTTCCTaGAGGCCTTCTCCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VMARLTMSQVLKPLKRSSQSTPS*RPSPLM Trigger: CATCAAAGGAGAAGGCCTGCAGGAAGGCGTGGACTG...GGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | TACATGTATGACCTGATCACCACCCAGACCTTCACAGTTGTGAACAACACGCACTTTCACAGAGGTCACTaGGTCTCTAAGGTCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: YMYDLITTQTFTVVNNTHFHRGH*VSKVHF Trigger: AAAATGGACCTTAGAGACTCAGTGACCTCTGTGAAA...GTGCGTGTTGTTCACAACTGTGAAGGTCTGGGTGGTGATCAGGTCATACATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| CDS-3UTR TCA 90 bp | AGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTTCTAAGCACAGCAACTaGGACACTTTCACAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPKALKTFFQSPPKQAECSKHSN*DTFTEV Trigger: GACCTCTGTGAAAGTGTCTCAGTTGCTGTGCTTAGA...ACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR GCA 90 bp | AGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGTCCACGCCTTCCTaGAGGCCTTCTCCTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SNGQINNVSSPKALKTFFQSTPS*RPSPLM Trigger: CATCAAAGGAGAAGGCCTGCAGGAAGGCGTGGACTG...GAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | CTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGGTTTTCCTGTACCTTCCTTaGCCTGACATGTCAAACACT | + |
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Preference number: 4 (lower is better) Translates to: LKPLKRSSRVHQSKQNVVFLYLP*PDMSNT Trigger: AGTGTTTGACATGTCAGGTCAAGGAAGGTACAGGAA...AACCACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | GTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGTGCTTAATATCTGGGTaGTTCAGAAGGGTATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VLKPLKRSSRVHQSKQNVCLISG*FRRVSS Trigger: GCTTGATACCCTTCTGAATCACCCAGATATTAAGCA...CACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | AGATTTTGTATAGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTACAGGCCAAGCAAACCTaGAAGTCTGTCCAGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RFCIVMARLTMSQVLKPLQAKQT*KSVQQA Trigger: GGCTTGCTGGACAGACTTTCAGGTTTGCTTGGCCTG...TAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACTATACAAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | CTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGGTTTGCTTAATATCTGGGTaGTTCAGAAGGGTATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LKPLKRSSRVHQSKQNVVCLISG*FRRVSS Trigger: GCTTGATACCCTTCTGAATCACCCAGATATTAAGCA...AACCACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | AATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGTCTAAGCACAGCAACTaGGACACTTTCACAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NGQINNVSSPKALKTFFQSKHSN*DTFTEV Trigger: GACCTCTGTGAAAGTGTCTCAGTTGCTGTGCTTAGA...CTGGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR GCA 90 bp | GTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGTCACTAGCACAAATATaGCACGGCTTGTCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLKRSSRVHQSKQNVSLAQI*HGLSLM Trigger: CATTAAAGACAAGCCGTGGCATATTTGTGCTAGTGA...CACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTTCACTAGCACAAATATaGCACGGCTTGTCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: SPKALKTFFQSPPKQAECSLAQI*HGLSLM Trigger: CATTAAAGACAAGCCGTGGCATATTTGTGCTAGTGA...ACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CCA 90 bp | GTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGTGCAAAGAACAAGATTaGAATTCGACGGTGCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: VLKPLKRSSRVHQSKQNVCKEQD*NSTVLN Trigger: ATTAAGCACCGTCGAATTCCAATCTTGTTCTTTGCA...CACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | TTCATCAGGCACCGAGGAAATGAATTCAGTTTAGTTGGCCTTGGAAAATATTTGTTCCTGTACCTTCCTTaGCCTGACATGTCAAACACT | + |
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Preference number: 4 (lower is better) Translates to: FIRHRGNEFSLVGLGKYLFLYLP*PDMSNT Trigger: AGTGTTTGACATGTCAGGTCAAGGAAGGTACAGGAA...CAAATATTTTCCAAGGCCAACTAAACTGAATTCATTTCCTCGGTGCCTGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| CDS-3UTR TCA 90 bp | AGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCTTTCACAGAGGTCACTaGGTCTCTAAGGTCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: SNGQINNVSSPKALKTFFFHRGH*VSKVHF Trigger: AAAATGGACCTTAGAGACTCAGTGACCTCTGTGAAA...GAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CCA 90 bp | CCCTTCATCAGGCACCGAGGAAATGAATTCAGTTTAGTTGGCCTTGGAAAATATTATCAAGCTCTTCTTTaGCCACAACCATTCTTAACT | + |
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Preference number: 4 (lower is better) Translates to: PFIRHRGNEFSLVGLGKYYQALL*PQPFLT Trigger: AGTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATA...ATATTTTCCAAGGCCAACTAAACTGAATTCATTTCCTCGGTGCCTGATGAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| CDS-3UTR GCA 90 bp | AGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCTCACTAGCACAAATATaGCACGGCTTGTCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: SNGQINNVSSPKALKTFFSLAQI*HGLSLM Trigger: CATTAAAGACAAGCCGTGGCATATTTGTGCTAGTGA...GAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CCA 90 bp | GTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCTATCAAGCTCTTCTTTaGCCACAACCATTCTTAACT | + |
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Preference number: 4 (lower is better) Translates to: VMARLTMSQVLKPLKRSSYQALL*PQPFLT Trigger: AGTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATA...GGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CCA 90 bp | ATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGATGCAAAGAACAAGATTaGAATTCGACGGTGCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: MARLTMSQVLKPLKRSSRCKEQD*NSTVLN Trigger: ATTAAGCACCGTCGAATTCCAATCTTGTTCTTTGCA...TCTGGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR TCA 90 bp | AGATTTTGTATAGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTATTTCACAGAGGTCACTaGGTCTCTAAGGTCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: RFCIVMARLTMSQVLKPLFHRGH*VSKVHF Trigger: AAAATGGACCTTAGAGACTCAGTGACCTCTGTGAAA...TAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACTATACAAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CCA 90 bp | AGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCTATCAAGCTCTTCTTTaGCCACAACCATTCTTAACT | + |
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Preference number: 4 (lower is better) Translates to: SNGQINNVSSPKALKTFFYQALL*PQPFLT Trigger: AGTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATA...GAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS TCA 90 bp | TACCAAACTGCCCGAATCTCCAGTTCCAGAAGCTCTGACACATTCTaGTGGCTTTTGTGGGCTTCTGCATGCCTGGGTGATTCAGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: YQTARISSSRSSDTF*WLLWASACLGDSEG Trigger: CCCTTCTGAATCACCCAGGCATGCAGAAGCCCACAAAAGCCATCAGAATGTGTCAGAGCTTCTGGAACTGGAGATTCGGGCAGTTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149797.3 |
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| CDS TCA 90 bp | ATGATTGTGGTTTTCCCACTGTTATCCAGCCCCAGGCACAGAACATaGACCTCCTTCTTCTTCAGGCCAAGCAAACCTGAAAGTCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: MIVVFPLLSSPRHRT*TSFFFRPSKPESLS Trigger: GGACAGACTTTCAGGTTTGCTTGGCCTGAAGAAGAAGGAGGTTCATGTTCTGTGCCTGGGGCTGGATAACAGTGGGAAAACCACAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CCA 90 bp | GAAGCTCTGACACATTCTGATGGCTTTTGTGGGCTTCTGCATGCCTaGGTGATTCAGAAGGGTATCAAGCTCTTCTTTGGCCACAACCAT | + |
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Preference number: 5 (lower is better) Translates to: EALTHSDGFCGLLHA*VIQKGIKLFFGHNH Trigger: ATGGTTGTGGCCAAAGAAGAGCTTGATACCCTTCTGAATCACCCAGGCATGCAGAAGCCCACAAAAGCCATCAGAATGTGTCAGAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149797.3 |
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| CDS-3UTR CAA 90 bp | CTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGGTTTGCAGGCCTTCTCCTTaGATGGCGTCACTAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: LKPLKRSSRVHQSKQNVVCRPSP*MASLAQ Trigger: TTGTGCTAGTGACGCCATCAAAGGAGAAGGCCTGCA...AACCACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | AGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTTGCAGGCCTTCTCCTTaGATGGCGTCACTAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: SPKALKTFFQSPPKQAECCRPSP*MASLAQ Trigger: TTGTGCTAGTGACGCCATCAAAGGAGAAGGCCTGCA...ACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | AGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTTCACGTCTTCACAGCTaGGATCTGATCTTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SPKALKTFFQSPPKQAECSRLHS*DLILEP Trigger: TGGCTCCAAGATCAGATCCAAGCTGTGAAGACGTGA...ACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023405.16 |
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| CDS-3UTR CAA 90 bp | ATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGATGCAGGCCTTCTCCTTaGATGGCGTCACTAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: MARLTMSQVLKPLKRSSRCRPSP*MASLAQ Trigger: TTGTGCTAGTGACGCCATCAAAGGAGAAGGCCTGCA...TCTGGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | GTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGAACTATATCTTGAGATaGAGCGTTGGAAGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: VLKPLKRSSRVHQSKQNVNYILR*SVGRLQ Trigger: CTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTT...CACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | CTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAATGTGGTTAACTATATCTTGAGATaGAGCGTTGGAAGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LKPLKRSSRVHQSKQNVVNYILR*SVGRLQ Trigger: CTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTT...AACCACATTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAAGTATCAAGCTCTTCTTaGGCCACAACCATTCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: SSPKALKTFFQSPPKQAEVSSSS*ATTILN Trigger: GTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATAC...TTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAACAAATATGCCACGGCTaGTCTTTAATGCTCTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSPKALKTFFQSPPKQAEQICHG*SLMLSK Trigger: CTTAGAGAGCATTAAAGACAAGCCGTGGCATATTTG...TTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | GTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAACTATATCTTGAGATaGAGCGTTGGAAGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: VMARLTMSQVLKPLKRSSNYILR*SVGRLQ Trigger: CTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTT...GGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGAGTCCACCAAAGCAAGCAGAAGACAAACTGGAGGACTaGAATTTCTCTATGCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: SSPKALKTFFQSPPKQAEDKLED*NFSMLN Trigger: ATTTAGCATAGAGAAATTCAAGTCCTCCAGTTTGTC...TTCTGCTTGCTTTGGTGGACTCTGGAAGAACGTTTTAAGGGCTTTAGGACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | GTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCGTATCAAGCTCTTCTTaGGCCACAACCATTCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: VMARLTMSQVLKPLKRSSVSSSS*ATTILN Trigger: GTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATAC...GGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | GTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCCAAATATGCCACGGCTaGTCTTTAATGCTCTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: VMARLTMSQVLKPLKRSSQICHG*SLMLSK Trigger: CTTAGAGAGCATTAAAGACAAGCCGTGGCATATTTG...GGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS CCA 90 bp | AGACAAACTGGAGGACTTGAATTTCTCTATGCTAAATCCTATGGTTaGAACTATATCTTGAGATTGAGCGTTGGAAGGCTTCAGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: RQTGGLEFLYAKSYG*NYILRLSVGRLQLV Trigger: AACAAGCTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTTCCAACCATAGGATTTAGCATAGAGAAATTCAAGTCCTCCAGTTTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS-3UTR CAA 90 bp | AGTAATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAAATATGCCACGGCTaGTCTTTAATGCTCTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: SNGQINNVSSPKALKTFFQICHG*SLMLSK Trigger: CTTAGAGAGCATTAAAGACAAGCCGTGGCATATTTG...GAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS-3UTR CAA 90 bp | AATGGCCAGATTAACAATGTCTCAAGTCCTAAAGCCCTTAAAACGTTCTTCCAGGACAAACTGGAGGACTaGAATTTCTCTATGCTAAAT | + |
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Preference number: 5 (lower is better) Translates to: NGQINNVSSPKALKTFFQDKLED*NFSMLN Trigger: ATTTAGCATAGAGAAATTCAAGTCCTCCAGTTTGTC...CTGGAAGAACGTTTTAAGGGCTTTAGGACTTGAGACATTGTTAATCTGGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS TCA 72 bp | GTTTTCCCACTGTTATCCAGCCCCAGGCACAGAACATaGACCTCCTTCTTCTTCAGGCCAAGCAAACCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VFPLLSSPRHRT*TSFFFRPSKPE Trigger: TTCAGGTTTGCTTGGCCTGAAGAAGAAGGAGGTTCATGTTCTGTGCCTGGGGCTGGATAACAGTGGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS TCA 72 bp | ATTCTGATGGCTTTTGTGGGCTTCTGCATGCCTGGGTaGTTCAGAAGGGTATCAAGCTCTTCTTTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ILMAFVGFCMPG*FRRVSSSSLAT Trigger: TGTGGCCAAAGAAGAGCTTGATACCCTTCTGAATCACCCAGGCATGCAGAAGCCCACAAAAGCCATCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149797.3 |
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| CDS GCA 72 bp | AGGCCTTCTCCTTTGATGGCGTCACTAGCACAAATATaGCACGGCTTGTCTTTAATGCTCTCTAAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: RPSPLMASLAQI*HGLSLMLSKHS Trigger: GCTGTGCTTAGAGAGCATTAAAGACAAGCCGTGGCATATTTGTGCTAGTGACGCCATCAAAGGAGAAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS CCA 72 bp | ACACATTCTGATGGCTTTTGTGGGCTTCTGCATGCCTaGGTGATTCAGAAGGGTATCAAGCTCTTCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: THSDGFCGLLHA*VIQKGIKLFFG Trigger: GCCAAAGAAGAGCTTGATACCCTTCTGAATCACCCAGGCATGCAGAAGCCCACAAAAGCCATCAGAATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149797.3 |
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| CDS TCA 72 bp | CACGGCTTGTCTTTAATGCTCTCTAAGCACAGCAACTaGGACACTTTCACAGAGGTCACTGAGTCTCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: HGLSLMLSKHSN*DTFTEVTESLR Trigger: CCTTAGAGACTCAGTGACCTCTGTGAAAGTGTCTCAGTTGCTGTGCTTAGAGAGCATTAAAGACAAGCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CAA 72 bp | ACTTTCACAGAGGTCACTGAGTCTCTAAGGTCCATTTaGTTTGCAAAGAACAAGATTGGAATTCGACGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TFTEVTESLRSI*FAKNKIGIRRC Trigger: GCACCGTCGAATTCCAATCTTGTTCTTTGCAAACAAAATGGACCTTAGAGACTCAGTGACCTCTGTGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CCA 72 bp | TGCCTGGGTGATTCAGAAGGGTATCAAGCTCTTCTTTaGCCACAACCATTCTTAACTTATCACTACTATCAA | + |
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Preference number: 6 (lower is better) Translates to: CLGDSEGYQALL*PQPFLTYHYYQ Trigger: TTGATAGTAGTGATAAGTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATACCCTTCTGAATCACCCAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149797.3 |
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| CDS CCA 72 bp | GGAGGACTTGAATTTCTCTATGCTAAATCCTATGGTTaGAACTATATCTTGAGATTGAGCGTTGGAAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGLEFLYAKSYG*NYILRLSVGRL Trigger: AAGCCTTCCAACGCTCAATCTCAAGATATAGTTCCAACCATAGGATTTAGCATAGAGAAATTCAAGTCCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CAA 90 bp | GAATTTCTCTATGCTAAATCCTATGGTTGGAACTATATCTTGAGATaGAGCGTTGGAAGGCTTCAGCTTGTTAATGATTGTGGTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: EFLYAKSYGWNYILR*SVGRLQLVNDCGFP Trigger: GGGAAAACCACAATCATTAACAAGCTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTTCCAACCATAGGATTTAGCATAGAGAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CAA 90 bp | GGACTTGAATTTCTCTATGCTAAATCCTATGGTTGGAACTATATCTaGAGATTGAGCGTTGGAAGGCTTCAGCTTGTTAATGATTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GLEFLYAKSYGWNYI*RLSVGRLQLVNDCG Trigger: ACCACAATCATTAACAAGCTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTTCCAACCATAGGATTTAGCATAGAGAAATTCAAGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CCA 72 bp | TATCTGGGTGATTCAGAAGGGTATCAAGCTCTTCTTTaGCCACAACCATTCTTAACTTATCACTACTATCAA | + |
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Preference number: 6 (lower is better) Translates to: YLGDSEGYQALL*PQPFLTYHYYQ Trigger: TTGATAGTAGTGATAAGTTAAGAATGGTTGTGGCCAAAGAAGAGCTTGATACCCTTCTGAATCACCCAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 |
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| CDS CAA 72 bp | TATGCTAAATCCTATGGTTGGAACTATATCTTGAGATaGAGCGTTGGAAGGCTTCAGCTTGTTAATGATTGT | + |
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Preference number: 6 (lower is better) Translates to: YAKSYGWNYILR*SVGRLQLVNDC Trigger: ACAATCATTAACAAGCTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTTCCAACCATAGGATTTAGCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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| CDS CAA 72 bp | TTTCTCTATGCTAAATCCTATGGTTGGAACTATATCTaGAGATTGAGCGTTGGAAGGCTTCAGCTTGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: FLYAKSYGWNYI*RLSVGRLQLVN Trigger: ATTAACAAGCTGAAGCCTTCCAACGCTCAATCTCAAGATATAGTTCCAACCATAGGATTTAGCATAGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023405.16 ENSMUST00000099646.10 ENSMUST00000118438.8 ENSMUST00000149797.3 |
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