Pregenerated sensors for ARL5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017418Ensembl transcript IDs: ENSMUST00000017562.13, ENSMUST00000069870.11, ENSMUST00000128682.9, ENSMUST00000129509.3, ENSMUST00000193883.2, ENSMUST00000239125.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCTACGGCAATCCCAGCACTGGGATGGGGAAGCAGGAGCATCCTaGCCTGGTGCTGCTGCTCACCTTGGCTACCTGAAGCTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: CLRQSQHWDGEAGAS*PGAAAHLGYLKLCL Trigger: GAGACAGAGCTTCAGGTAGCCAAGGTGAGCAGCAGCACCAGGCCAGGATGCTCCTGCTTCCCCATCCCAGTGCTGGGATTGCCGTAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CCA 90 bp | GGATGGGGAAGCAGGAGCATCCTGGCCTGGTGCTGCTGCTCACCTTaGCTACCTGAAGCTCTGTCTCCAGACACTCCCCATGTTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: GWGSRSILAWCCCSP*LPEALSPDTPHVTK Trigger: TTTTGTAACATGGGGAGTGTCTGGAGACAGAGCTTCAGGTAGCCAAGGTGAGCAGCAGCACCAGGCCAGGATGCTCCTGCTTCCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CCA 90 bp | AAATTATATTCAATCAAAATGCCTACGGCAATCCCAGCACTGGGATaGGGAAGCAGGAGCATCCTGGCCTGGTGCTGCTGCTCACCTTGG | + |
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Preference number: 1 (lower is better) Translates to: KLYSIKMPTAIPALG*GSRSILAWCCCSPW Trigger: CCAAGGTGAGCAGCAGCACCAGGCCAGGATGCTCCTGCTTCCCCATCCCAGTGCTGGGATTGCCGTAGGCATTTTGATTGAATATAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR GCA 90 bp | GTCTGTAACACACTGATGTCCTGGCTGATGATACTCTTTCAGCACTaGCAAGCCAAGTGTTTAGGATGCCTTAGAAGCAGTGAACACACA | + |
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Preference number: 1 (lower is better) Translates to: VCNTLMSWLMILFQH*QAKCLGCLRSSEHT Trigger: TGTGTGTTCACTGCTTCTAAGGCATCCTAAACACTTGGCTTGGCAGTGCTGAAAGAGTATCATCAGCCAGGACATCAGTGTGTTACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CCA 90 bp | ATTTTCACAGCCAAGTGGGCTTCAGTCTGTAACACACTGATGTCCTaGCTGATGATACTCTTTCAGCACTGCCAAGCCAAGTGTTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: IFTAKWASVCNTLMS*LMILFQHCQAKCLG Trigger: TCCTAAACACTTGGCTTGGCAGTGCTGAAAGAGTATCATCAGCCAGGACATCAGTGTGTTACAGACTGAAGCCCACTTGGCTGTGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR TCA 90 bp | TGGCCAGGCTTGGTAGCGTCAGGGAATATTGTTTACAGCATTGTCTaGATCCCTCATTCTTTCCACAGGGAAAACCAACTGTTTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: WPGLVASGNIVYSIV*IPHSFHRENQLFPL Trigger: AAGAGGAAACAGTTGGTTTTCCCTGTGGAAAGAATGAGGGATTCAGACAATGCTGTAAACAATATTCCCTGACGCTACCAAGCCTGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CCA 90 bp | ATTCACCATGAGACTGAAAGTTTACTCCAAGAGAATAAACGGAGGTaGGGGAAGGAAGGCTCAGTCTCCCTGAATTTCCTGAGGGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: IHHETESLLQENKRR*GKEGSVSLNFLREN Trigger: ATTTTCCCTCAGGAAATTCAGGGAGACTGAGCCTTCCTTCCCCCACCTCCGTTTATTCTCTTGGAGTAAACTTTCAGTCTCATGGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR GCA 90 bp | ACTGCAGACCTTTCCTCTCCTTTCTGTAAGGAATTAAATACTGGGTaGTTTGCTCAAGTGTACCTGGTCACCTTCTTGCTGGGAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: TADLSSPFCKELNTG*FAQVYLVTFLLGNK Trigger: TTTGTTTCCCAGCAAGAAGGTGACCAGGTACACTTGAGCAAAGCACCCAGTATTTAATTCCTTACAGAAAGGAGAGGAAAGGTCTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR TCA 90 bp | AACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAATTTaGAGCCTCTTTCACATCATCCACAGCCACATTTATGGAAAGACC | + |
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Preference number: 1 (lower is better) Translates to: NNSTYTETGGGAKRI*SLFHIIHSHIYGKT Trigger: GGTCTTTCCATAAATGTGGCTGTGGATGATGTGAAAGAGGCTTCAAATTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR CCA 90 bp | ATACAAAACCAAAGACTTAAAACCTCCTCTTCAAAGAGTTCTTGGTaGCCAGGCTTGGTAGCGTCAGGGAATATTGTTTACAGCATTGTC | + |
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Preference number: 1 (lower is better) Translates to: IQNQRLKTSSSKSSW*PGLVASGNIVYSIV Trigger: GACAATGCTGTAAACAATATTCCCTGACGCTACCAAGCCTGGCCACCAAGAACTCTTTGAAGAGGAGGTTTTAAGTCTTTGGTTTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CCA 90 bp | GAGATACAAAACCAAAGACTTAAAACCTCCTCTTCAAAGAGTTCTTaGTGGCCAGGCTTGGTAGCGTCAGGGAATATTGTTTACAGCATT | + |
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Preference number: 1 (lower is better) Translates to: EIQNQRLKTSSSKSS*WPGLVASGNIVYSI Trigger: AATGCTGTAAACAATATTCCCTGACGCTACCAAGCCTGGCCACCAAGAACTCTTTGAAGAGGAGGTTTTAAGTCTTTGGTTTTGTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR TCA 90 bp | ATTCTGTCAAACCAGTATCTCGGAAAGAGCATGGTGGCCAAGAGGTaGAAGAAACTGGTTATAAAGGACATAACGAAACTTCAGATGTCA | + |
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Preference number: 1 (lower is better) Translates to: ILSNQYLGKSMVAKR*KKLVIKDITKLQMS Trigger: TGACATCTGAAGTTTCGTTATGTCCTTTATAACCAGTTTCTTTCACCTCTTGGCCACCATGCTCTTTCCGAGATACTGGTTTGACAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR CCA 90 bp | AGCTCTGTCTCCAGACACTCCCCATGTTACAAAACACTATTCCTATaGGAGTTATGTAAAGCTAGTCCTTTCAAGAATGAAATGTATATG | + |
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Preference number: 1 (lower is better) Translates to: SSVSRHSPCYKTLFL*ELCKASPFKNEMYM Trigger: CATATACATTTCATTCTTGAAAGGACTAGCTTTACATAACTCCCATAGGAATAGTGTTTTGTAACATGGGGAGTGTCTGGAGACAGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGCTCAAGTGTACCTGGTCACCTTCTTGCTGGGAAACAAAGAAAACAAAACTGGCCTGGTGCTGCTaGTCACCTTGGCTACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: ALLKCTWSPSCWETKKTKLAWCC*SPWLPE Trigger: TTCAGGTAGCCAAGGTGAGCAGCAGCACCAGGCCAG...TTTTGTTTTCTTTGTTTCCCAGCAAGAAGGTGACCAGGTACACTTGAGCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTTGCTGGGAAACAAAGAAAACAAAAATCCGGCCCAGCACTCACACTGCCTCGGAAAGAGCATGGTaGCCAAGAGGTGAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PSCWETKKTKIRPSTHTASERAW*PRGERN Trigger: GTTTCTTTCACCTCTTGGCCACCATGCTCTTTCCGA...GGCAGTGTGAGTGCTGGGCCGGATTTTTGTTTTCTTTGTTTCCCAGCAAGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR TCA 90 bp | AACAGCAAGGCTGATGAAAAGCCCCTGCAAAGGTCTCACAGGAACTTCCCAAGGATGCACCATACACACTaGTTTATATCTGCTTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NSKADEKPLQRSHRNFPRMHHTH*FISAFL Trigger: GAGAAAAGCAGATATAAATCAGTGTGTATGGTGCAT...CCTTGGGAAGTTCCTGTGAGACCTTTGCAGGGGCTTTTCATCAGCCTTGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCGTAATAGCCAGGCGTTCCCTGTCAATGCTATCCACAACAAGAATGATGATAGGTGTTCCAGGATaGCCTCAGAGATTCTTGACC | + |
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Preference number: 2 (lower is better) Translates to: SFVIARRSLSMLSTTRMMIGVPG*PQRFLT Trigger: GGTCAAGAATCTCTGAGGTCATCCTGGAACACCTAT...CATCATTCTTGTTGTGGATAGCATTGACAGGGAACGCCTGGCTATTACGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR CAA 90 bp | TATGTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTaGTGTTGTCATAAATTAAACATGCTGCTGCCTCAGCAGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: YVPVQWHLIQASLGG*CCHKLNMLLPQQPK Trigger: CTTTGGCTGCTGAGGCAGCAGCATGTTTAATTTATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000128682.9 ENSMUST00000129509.3 ENSMUST00000239125.2 |
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| 3UTR CAA 90 bp | ATGAAAGACACTGTTTCCTCCTCTGTGAACACCAGAGGGCCCACCTaGATCCTATTAATAATATGGTCTTTTGAACCAAGCTGCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: MKDTVSSSVNTRGPT*ILLIIWSFEPSCLA Trigger: TGCCAAGCAGCTTGGTTCAAAAGACCATATTATTAATAGGATCAAGGTGGGCCCTCTGGTGTTCACAGAGGAGGAAACAGTGTCTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATTTTCAGCTGCTGTCATaGACCCTTTCATATCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: VPVQWHLIQASLGGLCCHFQLLS*TLSYPV Trigger: AACAGGATATGAAAGGGTGCATGACAGCAGCTGAAA...ATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATTATGTTCCAGTACAGTaGCACTTGATTCAAGCGTCA | + |
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Preference number: 2 (lower is better) Translates to: VPVQWHLIQASLGGLCCHYVPVQ*HLIQAS Trigger: TGACGCTTGAATCAAGTGCCACTGTACTGGAACATA...ATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000128682.9 ENSMUST00000129509.3 ENSMUST00000239125.2 |
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| 3UTR CAA 90 bp | GAACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAATTaGAAGCCTCTTTCACATCATCCACAGCCACATTTATGGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: EQFYLHRDRRWGKKN*KPLSHHPQPHLWKD Trigger: GTCTTTCCATAAATGTGGCTGTGGATGATGTGAAAGAGGCTTCAAATTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR-3UTR TCA 90 bp | AACAAGGCAGTCACTGAAGAGTTAGAATACAGTCAGAAGAGTCCGGCTTCTACAATGGTGGCCAAGAGGTaGAAGAAACTGGTTATAAAG | + |
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Preference number: 2 (lower is better) Translates to: NKAVTEELEYSQKSPASTMVAKR*KKLVIK Trigger: CTTTATAACCAGTTTCTTTCACCTCTTGGCCACCAT...TGTAGAAGCCGGACTCTTCTGACTGTATTCTAACTCTTCAGTGACTGCCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTGCCAGGAGCTTGCTCTTTCCTTATCTTAAACTATGTTCTGAGAAAGAGATCGGAAAGAGCATGGTaGCCAAGAGGTGAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ELPGACSFLILNYVLRKRSERAW*PRGERN Trigger: GTTTCTTTCACCTCTTGGCCACCATGCTCTTTCCGA...TCTCTTTCTCAGAACATAGTTTAAGATAAGGAAAGAGCAAGCTCCTGGCAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR TCA 90 bp | AATAGCCAGGCGTTCCCTGTCAATGCTATCCACAACAAGAATGATGAACTCTGTTCCCACATAAGGAAATaGGTGTTCTTCACAACGATT | + |
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Preference number: 2 (lower is better) Translates to: NSQAFPVNAIHNKNDELCSHIRK*VFFTTI Trigger: AATCGTTGTGAAGAACACTCATTTCCTTATGTGGGA...ACAGAGTTCATCATTCTTGTTGTGGATAGCATTGACAGGGAACGCCTGGCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR TCA 90 bp | AATTCTTCTTTCGTAATAGCCAGGCGTTCCCTGTCAATGCTATCCACAACAAGAGATGAACTCTGTGTTTaGGTAATAGGTGTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: NSSFVIARRSLSMLSTTRDELCV*VIGVPG Trigger: TCCTGGAACACCTATTACTCAAACACAGAGTTCATC...TCTTGTTGTGGATAGCATTGACAGGGAACGCCTGGCTATTACGAAAGAAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGCTCAAGTGTACCTGGTCACCTTCTTGCTGGGAAACAAAGAAAACAAAAATACTCTTTCAGCACTaGCAAGCCAAGTGTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALLKCTWSPSCWETKKTKILFQH*QAKCLG Trigger: TCCTAAACACTTGGCTTGGCAGTGCTGAAAGAGTAT...TTTTGTTTTCTTTGTTTCCCAGCAAGAAGGTGACCAGGTACACTTGAGCAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGAAACAGAAAATGATCTCATAATTGGAAAATGCCATAATCGTCACTGTGAGAATAAACGGAGGTaGGGGAAGGAAGGCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: HGETENDLIIGKCHNRHCENKRR*GKEGSV Trigger: GACTGAGCCTTCCTTCCCCCACCTCCGTTTATTCTC...ACAGTGACGATTATGGCATTTTCCAATTATGAGATCATTTTCTGTTTCTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGCTCAAGTGTACCTGGTCACCTTCTTGCTGGGAAACAAAGAAAACAAAAAAAACACATGGGTGCTaGTTAGAAGCAATTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: ALLKCTWSPSCWETKKTKKTHGC*LEAILS Trigger: GCTTAGAATTGCTTCTAAGCAGCACCCATGTGTTTT...TTTTGTTTTCTTTGTTTCCCAGCAAGAAGGTGACCAGGTACACTTGAGCAAAGC 41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR GCA 90 bp | CATCTTTATGTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGCATATCCTGTTTATTTaGAAAGATAAGGACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HLYVPVQWHLIQASLGGLHILFI*KDKDCS Trigger: GCTGCAGTCCTTATCTTTGCAAATAAACAGGATATG...CAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAACATAAAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCACTACTACAAACCTAAGAAAGCAAAAGAACTGTCTATGCTAAGTCTGCTGTATGTTCCAGTACAGTaGCACTTGATTCAAGCGTCA | + |
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Preference number: 2 (lower is better) Translates to: SHYYKPKKAKELSMLSLLYVPVQ*HLIQAS Trigger: TGACGCTTGAATCAAGTGCCACTGTACTGGAACATA...CAGCAGACTTAGCATAGACAGTTCTTTTGCTTTCTTAGGTTTGTAGTAGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTAAAGAGTTTTACAATCCAAGCTAAAAGTATAACGAATCCAGGGCCTGTTCTGATGAAAAGCCCCTaGAAAGGTCTCACAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: HLKSFTIQAKSITNPGPVLMKSP*KGLTGT Trigger: AGTTCCTGTGAGACCTTTGCAGGGGCTTTTCATCAG...AACAGGCCCTGGATTCGTTATACTTTTAGCTTGGATTGTAAAACTCTTTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGAAACAGAAAATGATCTCATAATTGGAAAATGCCATAATCGTCACTGTTTGCTCAAGTGTACCTaGTCACCTTCTTGCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HGETENDLIIGKCHNRHCLLKCT*SPSCWE Trigger: TTCCCAGCAAGAAGGTGACCAGGTACACTTGAGCAA...ACAGTGACGATTATGGCATTTTCCAATTATGAGATCATTTTCTGTTTCTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR TCA 90 bp | GAACTGCCAGGAGCTTGCTCTTTCCTTATCTTAAACTATGTTCTGAGAAAGAGAAAACGCAAGTATTTGTaGTGTTTACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: ELPGACSFLILNYVLRKRKRKYL*CLHTHT Trigger: TGTGTGTGTGTGTAAACATCACAAATACTTGCGTTT...TCTCTTTCTCAGAACATAGTTTAAGATAAGGAAAGAGCAAGCTCCTGGCAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR TCA 90 bp | CATGGAGAAACAGAAAATGATCTCATAATTGGAAAATGCCATAATCGTCACTGTTCAAAGACATTTGGGTaGAGGGGGTTTTATGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: HGETENDLIIGKCHNRHCSKTFG*RGFYGS Trigger: GCTTCCATAAAACCCCCTTCACCCAAATGTCTTTGA...ACAGTGACGATTATGGCATTTTCCAATTATGAGATCATTTTCTGTTTCTCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTATTTGGAGATTTCAGCTGCTGTCATGCACCCTTTCATATCCTGTTTATTCCTTAAATCCTCATaGGCCAACATTCTGTATAAT | + |
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Preference number: 2 (lower is better) Translates to: VRYLEISAAVMHPFISCLFLKSS*ANILYN Trigger: ATTATACAGAATGTTGGCCCATGAGGATTTAAGGAA...TAAACAGGATATGAAAGGGTGCATGACAGCAGCTGAAATCTCCAAATACCTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR TCA 90 bp | GCACCATACACACTGATTTATATCTGCTTTTCTCTCTCATCTTTGATTATGAGTATGGTGGCCAAGAGGTaGAAGAAACTGGTTATAAAG | + |
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Preference number: 2 (lower is better) Translates to: APYTLIYICFSLSSLIMSMVAKR*KKLVIK Trigger: CTTTATAACCAGTTTCTTTCACCTCTTGGCCACCAT...ACTCATAATCAAAGATGAGAGAGAAAAGCAGATATAAATCAGTGTGTATGGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAACATGCTGCTGCCTCAGCAGCCAAAGGTATTAGGAAAAATGTTCATATCATTCCTTAAATCCTCATaGGCCAACATTCTGTATAAT | + |
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Preference number: 2 (lower is better) Translates to: LNMLLPQQPKVLGKMFISFLKSS*ANILYN Trigger: ATTATACAGAATGTTGGCCCATGAGGATTTAAGGAA...TGATATGAACATTTTTCCTAATACCTTTGGCTGCTGAGGCAGCAGCATGTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR TCA 90 bp | CATGGAGAAACAGAAAATGATCTCATAATTGGAAAATGCCATAATCGTCACTGTAAACGCAAGTATTTGTaGTGTTTACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: HGETENDLIIGKCHNRHCKRKYL*CLHTHT Trigger: TGTGTGTGTGTGTAAACATCACAAATACTTGCGTTT...ACAGTGACGATTATGGCATTTTCCAATTATGAGATCATTTTCTGTTTCTCCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR GCA 72 bp | GGATGGGGAAGCAGGAGCATCCTGGCCTGGTGCTGCTaGTCACCTTGGCTACCTGAAGCTCTGTCTCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: GWGSRSILAWCC*SPWLPEALSPD Trigger: GTCTGGAGACAGAGCTTCAGGTAGCCAAGGTGAGCAGCAGCACCAGGCCAGGATGCTCCTGCTTCCCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR GCA 72 bp | AACCCTTCTCCTGTGAGCGCACAGCACGACTGGATGTaGCACGGGTGGTCCTTGATTGAACTTAGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: NPSPVSAQHDWM*HGWSLIELRVR Trigger: CCTCACCCTAAGTTCAATCAAGGACCACCCGTGGCACATCCAGTCGTGCTGTGCGCTCACAGGAGAAGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR CCA 72 bp | CCTGTGAGCGCACAGCACGACTGGATGTGCCACGGGTaGTCCTTGATTGAACTTAGGGTGAGGTATTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: PVSAQHDWMCHG*SLIELRVRYLE Trigger: CTCCAAATACCTCACCCTAAGTTCAATCAAGGACCACCCGTGGCACATCCAGTCGTGCTGTGCGCTCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTTGCTGGGAAACAAAGAAAACAAAAATCCGGCCCAGCACTCACACTGCCCTCTTCAAAGAGTTCTaGGTGGCCAGGCTTGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: PSCWETKKTKIRPSTHTALFKEF*VARLGS Trigger: GCTACCAAGCCTGGCCACCAAGAACTCTTTGAAGAG...GGCAGTGTGAGTGCTGGGCCGGATTTTTGTTTTCTTTGTTTCCCAGCAAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CCA 72 bp | GCCAAGTGGGCTTCAGTCTGTAACACACTGATGTCCTaGCTGATGATACTCTTTCAGCACTGCCAAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: AKWASVCNTLMS*LMILFQHCQAK Trigger: CTTGGCTTGGCAGTGCTGAAAGAGTATCATCAGCCAGGACATCAGTGTGTTACAGACTGAAGCCCACTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR-3UTR CAA 90 bp | AAATCCGGCCCAGCACTCACACTGCCTCTAGCAGGGCATTCTGCATATTCAAAGAGCATCCTATGCTTATaGGGGTCCAAACATTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KSGPALTLPLAGHSAYSKSILCL*GSKHSL Trigger: AAGAGAATGTTTGGACCCCAATAAGCATAGGATGCT...CTTTGAATATGCAGAATGCCCTGCTAGAGGCAGTGTGAGTGCTGGGCCGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTGCTGCCTCAGCAGCCAAAGGTATTAGGAAAAATGTTCATATCACCGAACTTAGGGTGAGGTATTaGGAGATTTCAGCTGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HAAASAAKGIRKNVHITELRVRY*EISAAV Trigger: GACAGCAGCTGAAATCTCCAAATACCTCACCCTAAG...TTCGGTGATATGAACATTTTTCCTAATACCTTTGGCTGCTGAGGCAGCAGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
||
| 3UTR TCA 72 bp | GTGTGCCTAGACAAGACTAGAAGCTGTATCTTGAGGTaGCCCCTGACAGAAGATAAAGGACCTTCAAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: VCLDKTRSCILR*PLTEDKGPSKL Trigger: TAGTTTTGAAGGTCCTTTATCTTCTGTCAGGGGTCACCTCAAGATACAGCTTCTAGTCTTGTCTAGGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR TCA 72 bp | GCATCAGTTTCTTCCTTAGGGTTCCGAAGCAGTATGTaGTATGAAAGACACTGTTTCCTCCTCTGTGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: ASVSSLGFRSSM*YERHCFLLCEH Trigger: GTGTTCACAGAGGAGGAAACAGTGTCTTTCATATCACATACTGCTTCGGAACCCTAAGGAAGAAACTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| 3UTR GCA 72 bp | CTTTCCTCTCCTTTCTGTAAGGAATTAAATACTGGGTaGTTTGCTCAAGTGTACCTGGTCACCTTCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSPFCKELNTG*FAQVYLVTFLL Trigger: CAGCAAGAAGGTGACCAGGTACACTTGAGCAAAGCACCCAGTATTTAATTCCTTACAGAAAGGAGAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR CCA 72 bp | AACCAAAGACTTAAAACCTCCTCTTCAAAGAGTTCTTaGTGGCCAGGCTTGGTAGCGTCAGGGAATATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NQRLKTSSSKSS*WPGLVASGNIV Trigger: AACAATATTCCCTGACGCTACCAAGCCTGGCCACCAAGAACTCTTTGAAGAGGAGGTTTTAAGTCTTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR CCA 72 bp | AACAACCTCATAATCAAACAAGTTTGGAAGCATGTGTaGGGCGTGAGGGTGCGAAATGCTTTTGGTATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NNLIIKQVWKHV*GVRVRNAFGIC Trigger: GCAAATACCAAAAGCATTTCGCACCCTCACGCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| 3UTR TCA 72 bp | AGGGCCCACCTTGATCCTATTAATAATATGGTCTTTTaGACCAAGCTGCTTGGCAAAGATACTGTCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: RAHLDPINNMVF*TKLLGKDTVRP Trigger: TGGTCTGACAGTATCTTTGCCAAGCAGCTTGGTTCAAAAGACCATATTATTAATAGGATCAAGGTGGGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR CCA 72 bp | AACACCAGAGGGCCCACCTTGATCCTATTAATAATATaGTCTTTTGAACCAAGCTGCTTGGCAAAGATACTG | + |
|
Preference number: 3 (lower is better) Translates to: NTRGPTLILLII*SFEPSCLAKIL Trigger: CAGTATCTTTGCCAAGCAGCTTGGTTCAAAAGACCATATTATTAATAGGATCAAGGTGGGCCCTCTGGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| 3UTR CCA 72 bp | TGCGAAATGCTTTTGGTATTTGCTTTGACAGTTTCTTaGTTAGCACTTAAGTATCAGAGCAATGGCGCACGC | + |
|
Preference number: 3 (lower is better) Translates to: CEMLLVFALTVS*LALKYQSNGAR Trigger: GCGTGCGCCATTGCTCTGATACTTAAGTGCTAACCAAGAAACTGTCAAAGCAAATACCAAAAGCATTTCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| 3UTR CCA 72 bp | ACATTTTCTTTCAACAACCTCATAATCAAACAAGTTTaGAAGCATGTGTGGGGCGTGAGGGTGCGAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: TFSFNNLIIKQV*KHVWGVRVRNA Trigger: AGCATTTCGCACCCTCACGCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTTGAAAGAAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| 3UTR TCA 72 bp | AACCAGTATCTCGGAAAGAGCATGGTGGCCAAGAGGTaGAAGAAACTGGTTATAAAGGACATAACGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: NQYLGKSMVAKR*KKLVIKDITKL Trigger: AAGTTTCGTTATGTCCTTTATAACCAGTTTCTTTCACCTCTTGGCCACCATGCTCTTTCCGAGATACTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| 3UTR TCA 72 bp | TGCATTCCCTTACAAAAGCAAGTGCTACATCTACAGTaGTTCTCAAATGTGCTTCTAGGTGACAACATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CIPLQKQVLHLQ*FSNVLLGDNML Trigger: GAGCATGTTGTCACCTAGAAGCACATTTGAGAATCACTGTAGATGTAGCACTTGCTTTTGTAAGGGAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR CCA 72 bp | AGGGTTCATTCTTACTTTCATCTTAGACAACTGCTTTaGGAACCATTAACACTGCCCAGTAAGTCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RVHSYFHLRQLL*EPLTLPSKSDF Trigger: GAAGTCAGACTTACTGGGCAGTGTTAATGGTTCCCAAAGCAGTTGTCTAAGATGAAAGTAAGAATGAACCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| 3UTR GCA 72 bp | TTGATCCTATTAATAATATGGTCTTTTGAACCAAGCTaGTTGGCAAAGATACTGTCAGACCACTTGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LILLIIWSFEPS*LAKILSDHLQS Trigger: GCTCTGCAAGTGGTCTGACAGTATCTTTGCCAAGCAGCTTGGTTCAAAAGACCATATTATTAATAGGATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR TCA 72 bp | CCTATCCAATCAACAGCACAACATCTACTTGAATGCTaGTTCCATTTCCAAATAACTAACAGCAGTTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PIQSTAQHLLEC*FHFQITNSSCF Trigger: GAAGCAACTGCTGTTAGTTATTTGGAAATGGAATCAGCATTCAAGTAGATGTTGTGCTGTTGATTGGATAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| 3UTR GCA 72 bp | ATAGCAAATGTTCAAGTGAAACTCTCTAGCATCCTATaGTTATTGGGGTCCAAACATTCTCTTGGAGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IANVQVKLSSIL*LLGSKHSLGVK Trigger: CTTTACTCCAAGAGAATGTTTGGACCCCAATAAGCATAGGATGCTAGAGAGTTTCACTTGAACATTTGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| 3UTR CCA 72 bp | TCCAGACACTCCCCATGTTACAAAACACTATTCCTATaGGAGTTATGTAAAGCTAGTCCTTTCAAGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRHSPCYKTLFL*ELCKASPFKNE Trigger: TTCATTCTTGAAAGGACTAGCTTTACATAACTCCCATAGGAATAGTGTTTTGTAACATGGGGAGTGTCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR CCA 72 bp | AAAACATACTCCAAGTGTCCTGGCTCTAATTTACATTaGTGTGTTTTTACAAATTCTGCCAGTTACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KTYSKCPGSNLH*CVFTNSASYTH Trigger: GTGTGTGTAACTGGCAGAATTTGTAAAAACACACCAATGTAAATTAGAGCCAGGACACTTGGAGTATGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| 3UTR TCA 72 bp | AAACAGCAGCTAAGCTCTTTCAAGATGAAATTTGGATaGAAAACATTCACCATGAGACTGAAAGTTTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: KQQLSSFKMKFG*KTFTMRLKVYS Trigger: GGAGTAAACTTTCAGTCTCATGGTGAATGTTTTTCATCCAAATTTCATCTTGAAAGAGCTTAGCTGCTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| 3UTR CAA 72 bp | AGCGCACAGCACGACTGGATGTGCCACGGGTGGTCCTaGATTGAACTTAGGGTGAGGTATTTGGAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAQHDWMCHGWS*IELRVRYLEIS Trigger: TGAAATCTCCAAATACCTCACCCTAAGTTCAATCAAGGACCACCCGTGGCACATCCAGTCGTGCTGTGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
||
| CDS-3UTR CCA 90 bp | CAACAACCTCATAATCAAACAAGTTTGGAAGCATGTGTGGGGCGTGAGGGTGCGATCCACTCTAGACCTTaGCACAACCCTTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQPHNQTSLEACVGREGAIHSRP*HNPSPV Trigger: CACAGGAGAAGGGTTGTGCCAAGGTCTAGAGTGGAT...CGCACCCTCACGCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| CDS-3UTR TCA 90 bp | CAACAACCTCATAATCAAACAAGTTTGGAAGCATGTGTGGGGCGTGAGGGTGCGATAGGTGTTCCAGGATaGCCTCAGAGATTCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QQPHNQTSLEACVGREGAIGVPG*PQRFLT Trigger: GGTCAAGAATCTCTGAGGTCATCCTGGAACACCTAT...CGCACCCTCACGCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| CDS-3UTR CCA 90 bp | GTCTACCTAGTGAGTTCCAGGGCAAGGACTCCTGAGGGAAACCCTATCAAAACAATCTCACACCAATCCTaGAGGTCATCCACTCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYLVSSRARTPEGNPIKTISHQS*RSSTLD Trigger: GTCTAGAGTGGATGACCTCCAGGATTGGTGTGAGAT...TGTTTTGATAGGGTTTCCCTCAGGAGTCCTTGCCCTGGAACTCACTAGGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| 3UTR CAA 72 bp | ACTGGGTGCTTTGCTCAAGTGTACCTGGTCACCTTCTaGCTGGGAAACAAAGAAAACAAAAATCCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGCFAQVYLVTF*LGNKENKNPAQ Trigger: CTGGGCCGGATTTTTGTTTTCTTTGTTTCCCAGCAAGAAGGTGACCAGGTACACTTGAGCAAAGCACCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| CDS-3UTR CCA 90 bp | AAATCCGGCCCAGCACTCACACTGCCTCTAGCAGGGCATTCTGCATATTCAAAGAGAACTGATACAGAATaGTGGTTTTCCCCGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSGPALTLPLAGHSAYSKRTDTE*WFSPRY Trigger: ATAACGCGGGGAAAACCACCATTCTGTATCAGTTCT...CTTTGAATATGCAGAATGCCCTGCTAGAGGCAGTGTGAGTGCTGGGCCGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAATTTGAAGCCTCTATCCACTCTAGACCTTaGCACAACCCTTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TILPTQRQEVGQKEFEASIHSRP*HNPSPV Trigger: CACAGGAGAAGGGTTGTGCCAAGGTCTAGAGTGGAT...AGAGGCTTCAAATTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR CCA 90 bp | GTGAACACCAGAGGGCCCACCTTGATCCTATTAATAATATGGTCTTTTGAACCAGCAGAGCACCAATCCTaGAGGTCATCCACTCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VNTRGPTLILLIIWSFEPAEHQS*RSSTLD Trigger: GTCTAGAGTGGATGACCTCCAGGATTGGTGCTCTGC...TGGTTCAAAAGACCATATTATTAATAGGATCAAGGTGGGCCCTCTGGTGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193883.2 |
||
| 3UTR CAA 72 bp | CACGGGTGGTCCTTGATTGAACTTAGGGTGAGGTATTaGGAGATTTCAGCTGCTGTCATGCACCCTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HGWSLIELRVRY*EISAAVMHPFI Trigger: TATGAAAGGGTGCATGACAGCAGCTGAAATCTCCAAATACCTCACCCTAAGTTCAATCAAGGACCACCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128682.9 ENSMUST00000129509.3 |
||
| CDS-3UTR TCA 90 bp | CATCTTTATGTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGATAGGTGTTCCAGGATaGCCTCAGAGATTCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HLYVPVQWHLIQASLGGLIGVPG*PQRFLT Trigger: GGTCAAGAATCTCTGAGGTCATCCTGGAACACCTAT...CAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAACATAAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR TCA 90 bp | GCACCCTATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGGAGGTGGGGGATGAACTCTGTGTTTaGGTAATAGGTGTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: APYKSLGTILPTQRQEVGDELCV*VIGVPG Trigger: TCCTGGAACACCTATTACTCAAACACAGAGTTCATC...CCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAATTTGAAGCCTCTATCTCACACCAATCCTaGAGGTCATCCACTCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TILPTQRQEVGQKEFEASISHQS*RSSTLD Trigger: GTCTAGAGTGGATGACCTCCAGGATTGGTGTGAGAT...AGAGGCTTCAAATTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCCTCCTCTGTGAACACCAGAGGGCCCACCTTGATCCTATTAATAATATGTTTCAGCTGCTGTCATaGACCCTTTCATATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CFLLCEHQRAHLDPINNMFQLLS*TLSYPV Trigger: AACAGGATATGAAAGGGTGCATGACAGCAGCTGAAA...CATATTATTAATAGGATCAAGGTGGGCCCTCTGGTGTTCACAGAGGAGGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTTCTTTCAACAACCTCATAATCAAACAAGTTTGGAAGCATGTGTGGGGCATCCACTCTAGACCTTaGCACAACCCTTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSFNNLIIKQVWKHVWGIHSRP*HNPSPV Trigger: CACAGGAGAAGGGTTGTGCCAAGGTCTAGAGTGGAT...GCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTTGAAAGAAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGTCTCATAGGAACATTCTAAAGCTAGGAATAGATTCAGAGCACCCTATAATCCACTCTAGACCTTaGCACAACCCTTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TESHRNILKLGIDSEHPIIHSRP*HNPSPV Trigger: CACAGGAGAAGGGTTGTGCCAAGGTCTAGAGTGGAT...TATAGGGTGCTCTGAATCTATTCCTAGCTTTAGAATGTTCCTATGAGACTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTAGGAACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAAGATGAACTCTGTGTTTaGGTAATAGGTGTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLGTILPTQRQEVGQKEDELCV*VIGVPG Trigger: TCCTGGAACACCTATTACTCAAACACAGAGTTCATC...TTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR GCA 90 bp | CATCTTTATGTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGCGATTTCTTCAACATTaGTTCCTATGGTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLYVPVQWHLIQASLGGLRFLQH*FLWLEK Trigger: CTTCTCCAACCATAGGAAGCAATGTTGAAGAAATCG...CAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAACATAAAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR GCA 90 bp | ACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAATTTGAAGCCTCTCGATTTCTTCAACATTaGTTCCTATGGTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TILPTQRQEVGQKEFEASRFLQH*FLWLEK Trigger: CTTCTCCAACCATAGGAAGCAATGTTGAAGAAATCG...AGAGGCTTCAAATTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACACCAGAGGGCCCACCTTGATCCTATTAATAATATGGTCTTTTGAACCATTTCAGCTGCTGTCATaGACCCTTTCATATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNTRGPTLILLIIWSFEPFQLLS*TLSYPV Trigger: AACAGGATATGAAAGGGTGCATGACAGCAGCTGAAA...TGGTTCAAAAGACCATATTATTAATAGGATCAAGGTGGGCCCTCTGGTGTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATATTGCTTCCTATGGTTaGAGAAGTATGAACTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVQWHLIQASLGGLCCHIASYG*RSMNYF Trigger: GAAGTAGTTCATACTTCTCCAACCATAGGAAGCAAT...ATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR CCA 90 bp | GCACCCTATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGGAGGTGGGGTTCCTTAAATCCTCATaGGCCAACATTCTGTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: APYKSLGTILPTQRQEVGFLKSS*ANILYN Trigger: ATTATACAGAATGTTGGCCCATGAGGATTTAAGGAA...CCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGTCTCATAGGAACATTCTAAAGCTAGGAATAGATTCAGAGCACCCTATAATCTCACACCAATCCTaGAGGTCATCCACTCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TESHRNILKLGIDSEHPIISHQS*RSSTLD Trigger: GTCTAGAGTGGATGACCTCCAGGATTGGTGTGAGAT...TATAGGGTGCTCTGAATCTATTCCTAGCTTTAGAATGTTCCTATGAGACTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGGTATTTGGAGATTTCAGCTGCTGTCATGCACCCTTTCATATCCTGTTTATCAACTGATACAGAATaGTGGTTTTCCCCGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRYLEISAAVMHPFISCLSTDTE*WFSPRY Trigger: ATAACGCGGGGAAAACCACCATTCTGTATCAGTTGA...TAAACAGGATATGAAAGGGTGCATGACAGCAGCTGAAATCTCCAAATACCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128682.9 |
||
| CDS-3UTR CCA 90 bp | TGGATGTGCCACGGGTGGTCCTTGATTGAACTTAGGGTGAGGTATTTGGAGATTATTGCTTCCTATGGTTaGAGAAGTATGAAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WMCHGWSLIELRVRYLEIIASYG*RSMKTD Trigger: ATCAGTTTTCATACTTCTCCAACCATAGGAAGCAAT...AATCTCCAAATACCTCACCCTAAGTTCAATCAAGGACCACCCGTGGCACATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129509.3 |
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| 3UTR CAA 72 bp | ATCCTATTAATAATATGGTCTTTTGAACCAAGCTGCTaGGCAAAGATACTGTCAGACCACTTGCAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ILLIIWSFEPSC*AKILSDHLQSL Trigger: CAGGCTCTGCAAGTGGTCTGACAGTATCTTTGCCAAGCAGCTTGGTTCAAAAGACCATATTATTAATAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| CDS-3UTR TCA 90 bp | AGTACATACACACTTTATCCCTTTCATAAGGCAGATGAGCCAGATGACACAGATGATGAACTCTGTGTTTaGGTAATAGGTGTTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: STYTLYPFHKADEPDDTDDELCV*VIGVPG Trigger: TCCTGGAACACCTATTACTCAAACACAGAGTTCATC...ATCTGTGTCATCTGGCTCATCTGCCTTATGAAAGGGATAAAGTGTGTATGTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR TCA 90 bp | AACAAGGCAGTCACTGAAGAGTTAGAATACAGTCAGAAGAGTCCGGCTTCTACAGAGAAGTATGAAAACTaGTACAGAATGGTGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NKAVTEELEYSQKSPASTEKYEN*YRMVVF Trigger: GAAAACCACCATTCTGTATCAGTTTTCATACTTCTC...TGTAGAAGCCGGACTCTTCTGACTGTATTCTAACTCTTCAGTGACTGCCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129509.3 |
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| CDS-3UTR TCA 90 bp | TCTTTCGTAATAGCCAGGCGTTCCCTGTCAATGCTATCCACAACAAGAATGATGATGGTTGGAGAAGTATaGAAACTGATACAGAATGGT | + |
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Preference number: 4 (lower is better) Translates to: SFVIARRSLSMLSTTRMMMVGEV*KLIQNG Trigger: ACCATTCTGTATCAGTTTTCATACTTCTCCAACCAT...CATCATTCTTGTTGTGGATAGCATTGACAGGGAACGCCTGGCTATTACGAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129509.3 |
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| CDS-3UTR CCA 90 bp | TATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAAGAACTGATACAGAATaGTGGTTTTCCCCGCGTTAT | + |
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Preference number: 4 (lower is better) Translates to: YKSLGTILPTQRQEVGQKRTDTE*WFSPRY Trigger: ATAACGCGGGGAAAACCACCATTCTGTATCAGTTCT...TTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATAAATTAAACAGAACTGATACAGAATaGTGGTTTTCCCCGCGTTAT | + |
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Preference number: 4 (lower is better) Translates to: QWHLIQASLGGLCCHKLNRTDTE*WFSPRY Trigger: ATAACGCGGGGAAAACCACCATTCTGTATCAGTTCT...GTTTAATTTATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | CAATTCTACCTACACAGAGACAGGAGGTGGGGCAAAAAGAATTTGAAGCCTCTTCAACATTGCTTCCTATaGTTGGAGAAGTATGAACTA | + |
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Preference number: 4 (lower is better) Translates to: QFYLHRDRRWGKKNLKPLQHCFL*LEKYEL Trigger: TAGTTCATACTTCTCCAACCATAGGAAGCAATGTTG...AAGAGGCTTCAAATTCTTTTTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR TCA 90 bp | AAGAAAACATCTTTATGTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGTCCCACATAAGGAAATaGGTGTTCTTCACAACGATT | + |
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Preference number: 4 (lower is better) Translates to: KKTSLCSSTVALDSSVTWSHIRK*VFFTTI Trigger: AATCGTTGTGAAGAACACTCATTTCCTTATGTGGGA...CCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAACATAAAGATGTTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR TCA 90 bp | AGATTCAGAGCACCCTATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGTCCCACATAAGGAAATaGGTGTTCTTCACAACGATT | + |
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Preference number: 4 (lower is better) Translates to: RFRAPYKSLGTILPTQRQSHIRK*VFFTTI Trigger: AATCGTTGTGAAGAACACTCATTTCCTTATGTGGGA...CTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGGTGCTCTGAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR GCA 90 bp | AGTACATACACACTTTATCCCTTTCATAAGGCAGATGAGCCAGATGACACAGATCGATTTCTTCAACATTaGTTCCTATGGTTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: STYTLYPFHKADEPDDTDRFLQH*FLWLEK Trigger: CTTCTCCAACCATAGGAAGCAATGTTGAAGAAATCG...ATCTGTGTCATCTGGCTCATCTGCCTTATGAAAGGGATAAAGTGTGTATGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR GCA 90 bp | AGGAATAGATTCAGAGCACCCTATAAGAGTTTAGGAACAATTCTACCTACACAGTTTCAGCTGCTGTCATaGACCCTTTCATATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RNRFRAPYKSLGTILPTQFQLLS*TLSYPV Trigger: AACAGGATATGAAAGGGTGCATGACAGCAGCTGAAA...CTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGGTGCTCTGAATCTATTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | AACAAGGCAGTCACTGAAGAGTTAGAATACAGTCAGAAGAGTCCGGCTTCTACATTCCTTAAATCCTCATaGGCCAACATTCTGTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKAVTEELEYSQKSPASTFLKSS*ANILYN Trigger: ATTATACAGAATGTTGGCCCATGAGGATTTAAGGAA...TGTAGAAGCCGGACTCTTCTGACTGTATTCTAACTCTTCAGTGACTGCCTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR CAA 72 bp | GTAAGAAAACATCTTTATGTTCCAGTACAGTGGCACTaGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VRKHLYVPVQWH*IQASLGGLCCH Trigger: ATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAACATAAAGATGTTTTCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000128682.9 ENSMUST00000129509.3 ENSMUST00000239125.2 |
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| 3UTR CAA 72 bp | AATGTTCAAGTGAAACTCTCTAGCATCCTATGCTTATaGGGGTCCAAACATTCTCTTGGAGTAAAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVQVKLSSILCL*GSKHSLGVKHS Trigger: GCTATGCTTTACTCCAAGAGAATGTTTGGACCCCAATAAGCATAGGATGCTAGAGAGTTTCACTTGAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| 3UTR CAA 72 bp | CAGATTAACAGTCCAGAGCAAACTGCATCTTTTTCCTaGGGTAAGTTGGCATGCACACAATTCATTAGAACA | + |
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Preference number: 4 (lower is better) Translates to: QINSPEQTASFS*GKLACTQFIRT Trigger: TGTTCTAATGAATTGTGTGCATGCCAACTTACCCAAGGAAAAAGATGCAGTTTGCTCTGGACTGTTAATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
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| CDS-3UTR GCA 90 bp | TCTCATAGGAACATTCTAAAGCTAGGAATAGATTCAGAGCACCCTATAAGAGTTTTTCAGCTGCTGTCATaGACCCTTTCATATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHRNILKLGIDSEHPIRVFQLLS*TLSYPV Trigger: AACAGGATATGAAAGGGTGCATGACAGCAGCTGAAA...AACTCTTATAGGGTGCTCTGAATCTATTCCTAGCTTTAGAATGTTCCTATGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | ATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATAAATTAAACATGCTGCTGCCTCAACATTGCTTCCTATaGTTGGAGAAGTATGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQASLGGLCCHKLNMLLPQHCFL*LEKYEN Trigger: GTTTTCATACTTCTCCAACCATAGGAAGCAATGTTG...AGGCAGCAGCATGTTTAATTTATGACAACACAAACCTCCAAGTGACGCTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129509.3 |
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| CDS-3UTR GCA 90 bp | ATTTTCTTTCAACAACCTCATAATCAAACAAGTTTGGAAGCATGTGTGGGGCGTCATATCCTGTTTATTTaGAAAGATAAGGACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFFQQPHNQTSLEACVGRHILFI*KDKDCS Trigger: GCTGCAGTCCTTATCTTTGCAAATAAACAGGATATG...ACGCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTTGAAAGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| 3UTR CAA 72 bp | TGCGTAAGGCTTCAGAATATTAAACAGAACACATATTaGAGGCTTGGCTTATTTAAAAGGTCCTCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVRLQNIKQNTY*RLGLFKRSSLW Trigger: CCAAAGTGAGGACCTTTTAAATAAGCCAAGCCTCAAATATGTGTTCTGTTTAATATTCTGAAGCCTTACGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| CDS-3UTR TCA 90 bp | GCACCATACACACTGATTTATATCTGCTTTTCTCTCTCATCTTTGATTATGAGTTCCCACATAAGGAAATaGGTGTTCTTCACAACGATT | + |
|
Preference number: 4 (lower is better) Translates to: APYTLIYICFSLSSLIMSSHIRK*VFFTTI Trigger: AATCGTTGTGAAGAACACTCATTTCCTTATGTGGGA...ACTCATAATCAAAGATGAGAGAGAAAAGCAGATATAAATCAGTGTGTATGGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR GCA 90 bp | CAGCAGTTGCTTCTAGTCCAAATGAATCATGTGCCTTTAAAAAGGATTTACAAGCATATCCTGTTTATTTaGAAAGATAAGGACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QQLLLVQMNHVPLKRIYKHILFI*KDKDCS Trigger: GCTGCAGTCCTTATCTTTGCAAATAAACAGGATATG...CTTGTAAATCCTTTTTAAAGGCACATGATTCATTTGGACTAGAAGCAACTGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGTTGCTTCTAGTCCAAATGAATCATGTGCCTTTAAAAAGGATTTACAAGATTGCTTCCTATGGTTaGAGAAGTATGAACTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQLLLVQMNHVPLKRIYKIASYG*RSMNYF Trigger: GAAGTAGTTCATACTTCTCCAACCATAGGAAGCAAT...CTTGTAAATCCTTTTTAAAGGCACATGATTCATTTGGACTAGAAGCAACTGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | AAGTGTCCTGGCTCTAATTTACATTGGTGTGTTTTTACAAATTCTGCCAGTTACCAACATTGCTTCCTATaGTTGGAGAAGTATGAACTA | + |
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Preference number: 4 (lower is better) Translates to: KCPGSNLHWCVFTNSASYQHCFL*LEKYEL Trigger: TAGTTCATACTTCTCCAACCATAGGAAGCAATGTTG...GTAACTGGCAGAATTTGTAAAAACACACCAATGTAAATTAGAGCCAGGACACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | TGTCATAAATTAAACATGCTGCTGCCTCAGCAGCCAAAGGTATTAGGAAAAATGTTCCTTAAATCCTCATaGGCCAACATTCTGTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CHKLNMLLPQQPKVLGKMFLKSS*ANILYN Trigger: ATTATACAGAATGTTGGCCCATGAGGATTTAAGGAA...CATTTTTCCTAATACCTTTGGCTGCTGAGGCAGCAGCATGTTTAATTTATGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CCA 90 bp | GCACCATACACACTGATTTATATCTGCTTTTCTCTCTCATCTTTGATTATGAGTCAACATTGCTTCCTATaGTTGGAGAAGTATGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: APYTLIYICFSLSSLIMSQHCFL*LEKYEL Trigger: TAGTTCATACTTCTCCAACCATAGGAAGCAATGTTG...ACTCATAATCAAAGATGAGAGAGAAAAGCAGATATAAATCAGTGTGTATGGTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | GTTCCAGTACAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATCTTAGGGTGAGGTATTaGGAGATTTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPVQWHLIQASLGGLCCHLRVRY*EISAAV Trigger: GACAGCAGCTGAAATCTCCAAATACCTCACCCTAAG...ATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTGTACTGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | CCCTATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGGAGGTGGGGCAACTTAGGGTGAGGTATTaGGAGATTTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PYKSLGTILPTQRQEVGQLRVRY*EISAAV Trigger: GACAGCAGCTGAAATCTCCAAATACCTCACCCTAAG...TTGCCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | GTCTACCTAGTGAGTTCCAGGGCAAGGACTCCTGAGGGAAACCCTATCAAAACACATTGCTTCCTATGGTaGGAGAAGTATGAACTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VYLVSSRARTPEGNPIKTHCFLW*EKYELL Trigger: AAGTAGTTCATACTTCTCCAACCATAGGAAGCAATG...TGTTTTGATAGGGTTTCCCTCAGGAGTCCTTGCCCTGGAACTCACTAGGTAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | GCACCCTATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGGAGGTGGGGCATTGCTTCCTATGGTaGGAGAAGTATGAACTACTT | + |
|
Preference number: 5 (lower is better) Translates to: APYKSLGTILPTQRQEVGHCFLW*EKYELL Trigger: AAGTAGTTCATACTTCTCCAACCATAGGAAGCAATG...CCCCACCTCCTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | GTGAACACCAGAGGGCCCACCTTGATCCTATTAATAATATGGTCTTTTGAACCACTTAGGGTGAGGTATTaGGAGATTTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNTRGPTLILLIIWSFEPLRVRY*EISAAV Trigger: GACAGCAGCTGAAATCTCCAAATACCTCACCCTAAG...TGGTTCAAAAGACCATATTATTAATAGGATCAAGGTGGGCCCTCTGGTGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCTTTCAACAACCTCATAATCAAACAAGTTTGGAAGCATGTGTGGGGCGTCTTAGGGTGAGGTATTaGGAGATTTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFFQQPHNQTSLEACVGRLRVRY*EISAAV Trigger: GACAGCAGCTGAAATCTCCAAATACCTCACCCTAAG...ACGCCCCACACATGCTTCCAAACTTGTTTGATTATGAGGTTGTTGAAAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000193883.2 |
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| CDS-3UTR CAA 90 bp | AGCCACTACTACAAACCTAAGAAAGCAAAAGAACTGTCTATGCTAAGTCTGCTGCATTGCTTCCTATGGTaGGAGAAGTATGAACTACTT | + |
|
Preference number: 5 (lower is better) Translates to: SHYYKPKKAKELSMLSLLHCFLW*EKYELL Trigger: AAGTAGTTCATACTTCTCCAACCATAGGAAGCAATG...CAGCAGACTTAGCATAGACAGTTCTTTTGCTTTCTTAGGTTTGTAGTAGTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | AACCTCTCTAACAGATTAACAGTCCAGAGCAAACTGCATCTTTTTCCTTGGGTAACGATTTCTTCAACATaGCTTCCTATGGTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLSNRLTVQSKLHLFPWVTISST*LPMVGE Trigger: TTCTCCAACCATAGGAAGCAATGTTGAAGAAATCGT...TACCCAAGGAAAAAGATGCAGTTTGCTCTGGACTGTTAATCTGTTAGAGAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| CDS-3UTR CAA 90 bp | GAACTGCCAGGAGCTTGCTCTTTCCTTATCTTAAACTATGTTCTGAGAAAGAGAACGATTTCTTCAACATaGCTTCCTATGGTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELPGACSFLILNYVLRKRTISST*LPMVGE Trigger: TTCTCCAACCATAGGAAGCAATGTTGAAGAAATCGT...TCTCTTTCTCAGAACATAGTTTAAGATAAGGAAAGAGCAAGCTCCTGGCAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017562.13 ENSMUST00000069870.11 |
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| CDS-3UTR CAA 90 bp | GTGAGGTATTTGGAGATTTCAGCTGCTGTCATGCACCCTTTCATATCCTGTTTACCCACAATGATTACTTaGTGCTCTTGGTTACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VRYLEISAAVMHPFISCLPTMIT*CSWLQK Trigger: TTTTTGTAACCAAGAGCACAAAGTAATCATTGTGGG...TAAACAGGATATGAAAGGGTGCATGACAGCAGCTGAAATCTCCAAATACCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128682.9 |
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| CDS-3UTR CAA 90 bp | CAGTGGCACTTGATTCAAGCGTCACTTGGAGGTTTGTGTTGTCATAAATTAAACCCCACAATGATTACTTaGTGCTCTTGGTTACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QWHLIQASLGGLCCHKLNPTMIT*CSWLQK Trigger: TTTTTGTAACCAAGAGCACAAAGTAATCATTGTGGG...GTTTAATTTATGACAACACAAACCTCCAAGTGACGCTTGAATCAAGTGCCACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069870.11 ENSMUST00000128682.9 ENSMUST00000239125.2 |
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| CDS-3UTR CAA 90 bp | AGATTCAGAGCACCCTATAAGAGTTTAGGAACAATTCTACCTACACAGAGACAGCCCACAATGATTACTTaGTGCTCTTGGTTACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RFRAPYKSLGTILPTQRQPTMIT*CSWLQK Trigger: TTTTTGTAACCAAGAGCACAAAGTAATCATTGTGGG...CTGTCTCTGTGTAGGTAGAATTGTTCCTAAACTCTTATAGGGTGCTCTGAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069870.11 ENSMUST00000239125.2 |
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