Pregenerated sensors for ARL2BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031776Ensembl transcript IDs: ENSMUST00000034228.16, ENSMUST00000109527.6
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGCTGGAGGACAGCCCCCAGGTGAGGTGGCCAACCCGGGCCTGTaGCTGAGGAGCCACTCAGAAGCACCTGGAGCAGGGAACATGAGG | + |
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Preference number: 1 (lower is better) Translates to: VAGGQPPGEVANPGL*LRSHSEAPGAGNMR Trigger: CCTCATGTTCCCTGCTCCAGGTGCTTCTGAGTGGCTCCTCAGGCACAGGCCCGGGTTGGCCACCTCACCTGGGGGCTGTCCTCCAGCAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR CCA 90 bp | GGTGGCCAACCCGGGCCTGTGCCTGAGGAGCCACTCAGAAGCACCTaGAGCAGGGAACATGAGGGTAGCGGACTAGGGGAAGGAGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: GGQPGPVPEEPLRST*SREHEGSGLGEGVS Trigger: AGAAACTCCTTCCCCTAGTCCGCTACCCTCATGTTCCCTGCTCCAGGTGCTTCTGAGTGGCTCCTCAGGCACAGGCCCGGGTTGGCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR TCA 90 bp | CCAGCAAGGTCAGTCGTGTTTTCCAGGACTTATCAATACTTCACATaGACAAAGGGCTGTGGCACAGAGGGTCTTTGCAGGATACACCTG | + |
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Preference number: 1 (lower is better) Translates to: PARSVVFSRTYQYFT*TKGCGTEGLCRIHL Trigger: CAGGTGTATCCTGCAAAGACCCTCTGTGCCACAGCCCTTTGTTCATGTGAAGTATTGATAAGTCCTGGAAAACACGACTGACCTTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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| 3UTR-3UTR CCA 90 bp | CTACACTACCATGTTGCTGGAGGACAGCCCCCAGGTGAGGTGGCCAACCCGGGCAGGGGAAGGAGTTTCTaGACAAGGGCCAGCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LHYHVAGGQPPGEVANPGRGRSF*TRASKV Trigger: GACCTTGCTGGCCCTTGTCCAGAAACTCCTTCCCCT...GCCCGGGTTGGCCACCTCACCTGGGGGCTGTCCTCCAGCAACATGGTAGTGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTTCTTCTTCACTTGTGGGTAGAGGGCAGCTCTCTCGGTGGATCCCCACAGCCAACCCGGGCCTGTaGCTGAGGAGCCACTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSSSSLVGRGQLSRWIPTANPGL*LRSHSE Trigger: TTCTGAGTGGCTCCTCAGGCACAGGCCCGGGTTGGC...TGTGGGGATCCACCGAGAGAGCTGCCCTCTACCCACAAGTGAAGAAGAACTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR CAA 90 bp | CACAACAGTGTGGTCTCCACACTGTTGACACACTACACTACCATGTaGCTGGAGGACAGCCCCCAGGTGAGGTGGCCAACCCGGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HNSVVSTLLTHYTTM*LEDSPQVRWPTRAC Trigger: ACAGGCCCGGGTTGGCCACCTCACCTGGGGGCTGTCCTCCAGCAACATGGTAGTGTAGTGTGTCAACAGTGTGGAGACCACACTGTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR-3UTR GCA 90 bp | TCACTGGCCTACACGAAGGACTGCACACAAGCATGCACAAGCACACCTCGCATGGCCTCTTTGTTCTGGTaGCCAGCAAGGAGAACCCGT | + |
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Preference number: 2 (lower is better) Translates to: SLAYTKDCTQACTSTPRMASLFW*PARRTR Trigger: ACGGGTTCTCCTTGCTGGGCACCAGAACAAAGAGGC...CATGCGAGGTGTGCTTGTGCATGCTTGTGTGCAGTCCTTCGTGTAGGCCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR-3UTR CCA 90 bp | TCCACACTGTTGACACACTACACTACCATGTTGCTGGAGGACAGCCCCCAGGTGCCACTCAGAAGCACCTaGAGCAGGGAACATGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: STLLTHYTTMLLEDSPQVPLRST*SREHEG Trigger: ACCCTCATGTTCCCTGCTCCAGGTGCTTCTGAGTGG...CACCTGGGGGCTGTCCTCCAGCAACATGGTAGTGTAGTGTGTCAACAGTGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR-3UTR CCA 90 bp | TCGGGAGTTCTTCTTCACTTGTGGGTAGAGGGCAGCTCTCTCGGTGGATCCCCAATGAACAAAGGGCTGTaGCACAGAGGGTCTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SGVLLHLWVEGSSLGGSPMNKGL*HRGSLQ Trigger: CTGCAAAGACCCTCTGTGCCACAGCCCTTTGTTCAT...TGGGGATCCACCGAGAGAGCTGCCCTCTACCCACAAGTGAAGAAGAACTCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR-3UTR GCA 90 bp | TCGGGAGTTCTTCTTCACTTGTGGGTAGAGGGCAGCTCTCTCGGTGGATCCCCACTCCCTAGATCAACATaGCCAAACAAAAGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: SGVLLHLWVEGSSLGGSPLPRST*PNKSPI Trigger: AATGGGGCTTTTGTTTGGGCATGTTGATCTAGGGAG...TGGGGATCCACCGAGAGAGCTGCCCTCTACCCACAAGTGAAGAAGAACTCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR CAA 90 bp | TTATCAATACTTCACATGAACAAAGGGCTGTGGCACAGAGGGTCTTaGCAGGATACACCTGTCATCATTAGCCCATGTTTCTCGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSILHMNKGLWHRGS*QDTPVIISPCFSEP Trigger: AGGCTCCGAGAAACATGGGCTAATGATGACAGGTGTATCCTGCAAAGACCCTCTGTGCCACAGCCCTTTGTTCATGTGAAGTATTGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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| 3UTR GCA 72 bp | GGACAGCCCCCAGGTGAGGTGGCCAACCCGGGCCTGTaGCTGAGGAGCCACTCAGAAGCACCTGGAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GQPPGEVANPGL*LRSHSEAPGAG Trigger: CCCTGCTCCAGGTGCTTCTGAGTGGCTCCTCAGGCACAGGCCCGGGTTGGCCACCTCACCTGGGGGCTGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR TCA 72 bp | AGCCCCCAGGTGAGGTGGCCAACCCGGGCCTGTGCCTaGGGAGCCACTCAGAAGCACCTGGAGCAGGGAACA | + |
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Preference number: 3 (lower is better) Translates to: SPQVRWPTRACA*GATQKHLEQGT Trigger: TGTTCCCTGCTCCAGGTGCTTCTGAGTGGCTCCTCAGGCACAGGCCCGGGTTGGCCACCTCACCTGGGGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR TCA 72 bp | ACTACACTACCATGTTGCTGGAGGACAGCCCCCAGGTaGGGTGGCCAACCCGGGCCTGTGCCTGAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TTLPCCWRTAPR*GGQPGPVPEEP Trigger: TGGCTCCTCAGGCACAGGCCCGGGTTGGCCACCTCACCTGGGGGCTGTCCTCCAGCAACATGGTAGTGTAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR CCA 72 bp | CCCGGGCCTGTGCCTGAGGAGCCACTCAGAAGCACCTaGAGCAGGGAACATGAGGGTAGCGGACTAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: PGPVPEEPLRST*SREHEGSGLGE Trigger: TTCCCCTAGTCCGCTACCCTCATGTTCCCTGCTCCAGGTGCTTCTGAGTGGCTCCTCAGGCACAGGCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR-3UTR CAA 90 bp | CACGAAGGACTGCACACAAGCATGCACAAGCACACCTCGCATGCTGTCCTGACACAAACAAAAGCCCCATaGAGGCTGAGGCCTGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: HEGLHTSMHKHTSHAVLTQTKAP*RLRPEG Trigger: CCCTTCAGGCCTCAGCCTCAATGGGGCTTTTGTTTG...TGTCAGGACAGCATGCGAGGTGTGCTTGTGCATGCTTGTGTGCAGTCCTTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR CCA 72 bp | TCTTCTTCACTTGTGGGTAGAGGGCAGCTCTCTCGGTaGATCCCCACAGCCAATCAAGCTGTAATCGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SSSLVGRGQLSR*IPTANQAVIAG Trigger: TCCTGCGATTACAGCTTGATTGGCTGTGGGGATCCACCGAGAGAGCTGCCCTCTACCCACAAGTGAAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR TCA 72 bp | GATGAAGGGCTCACAACAGTGTGGTCTCCACACTGTTaGCACACTACACTACCATGTTGCTGGAGGACAGCC | + |
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Preference number: 3 (lower is better) Translates to: DEGLTTVWSPHC*HTTLPCCWRTA Trigger: GGCTGTCCTCCAGCAACATGGTAGTGTAGTGTGTCAACAGTGTGGAGACCACACTGTTGTGAGCCCTTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR TCA 72 bp | ACACATGCTTTCTGTTTGGTGGCAGTCCACCAAAGATaGCAGAGGACCAGAAATCTGTGTCCTGCCCCCACC | + |
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Preference number: 3 (lower is better) Translates to: THAFCLVAVHQR*QRTRNLCPAPT Trigger: GGTGGGGGCAGGACACAGATTTCTGGTCCTCTGTCATCTTTGGTGGACTGCCACCAAACAGAAAGCATGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR TCA 72 bp | AACTGGGAGAACATAGACTCACTAAAGCCTGCAGGATaGAGGGCTCACAACAGTGTGGTCTCCACACTGTTG | + |
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Preference number: 3 (lower is better) Translates to: NWENIDSLKPAG*RAHNSVVSTLL Trigger: CAACAGTGTGGAGACCACACTGTTGTGAGCCCTTCATCCTGCAGGCTTTAGTGAGTCTATGTTCTCCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| CDS-3UTR GCA 90 bp | CCCGGGCCTGTGCCTGAGGAGCCACTCAGAAGCACCTGGAGCAGGGAACATGAGTCACAACCAAGCCGCTaGTTAAGTCCAGTCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: PGPVPEEPLRSTWSREHESQPSR*LSPVLG Trigger: GCCGAGGACTGGACTTAAGCAGCGGCTTGGTTGTGA...CTCATGTTCCCTGCTCCAGGTGCTTCTGAGTGGCTCCTCAGGCACAGGCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| 3UTR CAA 72 bp | GTGGTCTCCACACTGTTGACACACTACACTACCATGTaGCTGGAGGACAGCCCCCAGGTGAGGTGGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: VVSTLLTHYTTM*LEDSPQVRWPT Trigger: GGTTGGCCACCTCACCTGGGGGCTGTCCTCCAGCAACATGGTAGTGTAGTGTGTCAACAGTGTGGAGACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| CDS-3UTR GCA 90 bp | CTACACTACCATGTTGCTGGAGGACAGCCCCCAGGTGAGGTGGCCAACCCGGGCATACGCTCCAGCAACTaGTCTTCAATGTACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LHYHVAGGQPPGEVANPGIRSSN*SSMYFS Trigger: AGAGAAGTACATTGAAGAGCAGTTGCTGGAGCGTAT...GCCCGGGTTGGCCACCTCACCTGGGGGCTGTCCTCCAGCAACATGGTAGTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| CDS-3UTR GCA 90 bp | AGACTCACTAAAGCCTGCAGGATGAAGGGCTCACAACAGTGTGGTCTCCACACTACCTCATCTTTGTGGTaGTGCAGCGTGGTTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RLTKACRMKGSQQCGLHTTSSLW*CSVVVK Trigger: CTTCACAACCACGCTGCAGCACCACAAAGATGAGGT...AGTGTGGAGACCACACTGTTGTGAGCCCTTCATCCTGCAGGCTTTAGTGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| CDS-3UTR CCA 90 bp | TGTTTTCCAGGACTTATCAATACTTCACATGAACAAAGGGCTGTGGCACAGAGGTGCCGCAGGTTGTTCTaGGAAGCTGGCGTAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: CFPGLINTSHEQRAVAQRCRRLF*EAGVED Trigger: ATCTTCTACGCCAGCTTCCCAGAACAACCTGCGGCA...CCTCTGTGCCACAGCCCTTTGTTCATGTGAAGTATTGATAAGTCCTGGAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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| CDS-3UTR CCA 90 bp | TCGTGTTTTCCAGGACTTATCAATACTTCACATGAACAAAGGGCTGTGGCACAGTGCCGCAGGTTGTTCTaGGAAGCTGGCGTAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SCFPGLINTSHEQRAVAQCRRLF*EAGVED Trigger: ATCTTCTACGCCAGCTTCCCAGAACAACCTGCGGCA...CTGTGCCACAGCCCTTTGTTCATGTGAAGTATTGATAAGTCCTGGAAAACACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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| CDS-3UTR TCA 90 bp | ATGCTTAGAGTCATAGAGAACAGTAGGGCTACATCAAGACCAGCAGGACTCACTAGCTGGCGTAGAAGATaGCTTACACAGAGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: MLRVIENSRATSRPAGLTSWRRR*LTQRSH Trigger: GTGACTTCTCTGTGTAAGTCATCTTCTACGCCAGCT...AGTGAGTCCTGCTGGTCTTGATGTAGCCCTACTGTTCTCTATGACTCTAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034228.16 |
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| CDS-3UTR TCA 90 bp | CAGGACTTATCAATACTTCACATGAACAAAGGGCTGTGGCACAGAGGGTCTTTGAGCTGGCGTAGAAGATaGCTTACACAGAGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QDLSILHMNKGLWHRGSLSWRRR*LTQRSH Trigger: GTGACTTCTCTGTGTAAGTCATCTTCTACGCCAGCT...CAAAGACCCTCTGTGCCACAGCCCTTTGTTCATGTGAAGTATTGATAAGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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| CDS-3UTR GCA 90 bp | CAGTCGTGTTTTCCAGGACTTATCAATACTTCACATGAACAAAGGGCTGTGGCAACCTCATCTTTGTGGTaGTGCAGCGTGGTTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QSCFPGLINTSHEQRAVATSSLW*CSVVVK Trigger: CTTCACAACCACGCTGCAGCACCACAAAGATGAGGT...TGCCACAGCCCTTTGTTCATGTGAAGTATTGATAAGTCCTGGAAAACACGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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| CDS-3UTR GCA 90 bp | CAGGACTTATCAATACTTCACATGAACAAAGGGCTGTGGCACAGAGGGTCTTTGATACGCTCCAGCAACTaGTCTTCAATGTACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QDLSILHMNKGLWHRGSLIRSSN*SSMYFS Trigger: AGAGAAGTACATTGAAGAGCAGTTGCTGGAGCGTAT...CAAAGACCCTCTGTGCCACAGCCCTTTGTTCATGTGAAGTATTGATAAGTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034228.16 ENSMUST00000109527.6 |
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