Pregenerated sensors for ARL15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042348Ensembl transcript IDs: ENSMUST00000091201.7, ENSMUST00000224068.2, ENSMUST00000224858.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCGCTGCAGAGCTCGGACAGCAGGCTGGTTTTCCCGGAGCCCGTaGGACCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: FRCRARTAGWFSRSP*DLCKPSHIQGAQVV Trigger: CACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGGTCTCACGGGCTCCGGGAAAACCAGCCTGCTGTCCGAGCTCTGCAGCGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR GCA 90 bp | GAGAAGCTGTCCTTCAGTGTGTCCACATCATCCAGAGAGCAGGGCTaGAGGATCCAGCGCTTTCCACGGGCCAGTGGTTCAAGTTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: EKLSFSVSTSSREQG*RIQRFPRASGSSSK Trigger: TTTTGAACTTGAACCACTGGCCCGTGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGATGATGTGGACACACTGAAGGACAGCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR CCA 90 bp | GCCCGTGAGACCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAGCGCTCGAAAACAAGTTGTCATCCT | + |
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Preference number: 1 (lower is better) Translates to: ARETYANQVIFRARR*WSLAAKRSKTSCHP Trigger: AGGATGACAACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGGTCTCACGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR GCA 90 bp | CTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAACAAGTTGTCATCCTTGACTTGCGTC | + |
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Preference number: 1 (lower is better) Translates to: LCKPSHIQGAQVVVP*SKALENKLSSLTCV Trigger: GACGCAAGTCAAGGATGACAACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR GCA 90 bp | ATCAAAAAGGGTAAAGTGCATAGCTGTGGGTGCTGGAGAGCGGAGTaGAGTTCGTTCCTAGCAGTTTCTAAGTCATCCTCTGAAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: IKKGKVHSCGCWRAE*SSFLAVSKSSSEEA Trigger: TGCCTCTTCAGAGGATGACTTAGAAACTGCTAGGAACGAACTGCACTCCGCTCTCCAGCACCCACAGCTATGCACTTTACCCTTTTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR TCA 90 bp | CAAGATGAAATCACAAATACTGCATTTGAGCACTGTGCAGGGTTCTaGGGACTCTCCTCTGGAGAGTCACAAGGTTTCCTGTCACCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: QDEITNTAFEHCAGF*GLSSGESQGFLSPC Trigger: ACAGGGTGACAGGAAACCTTGTGACTCTCCAGAGGAGAGTCCTCAGAACCCTGCACAGTGCTCAAATGCAGTATTTGTGATTTCATCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR TCA 90 bp | CAGTTTCTAAGTCATCCTCTGAAGAGGCACTGTCTAATACGAATATaGCCCCTTGAGATCCTTGGTAGTAGCGGCTCCAGTATTTCCGGA | + |
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Preference number: 1 (lower is better) Translates to: QFLSHPLKRHCLIRI*PLEILGSSGSSISG Trigger: TCCGGAAATACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTCATATTCGTATTAGACAGTGCCTCTTCAGAGGATGACTTAGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR CCA 90 bp | CACAAGGTTTCCTGTCACCCTGTGATAAATATGGCCCTAAGTCTGTaGCATCGGGGTATCAGTCTACACTACCTAAAAATGACAGACATG | + |
|
Preference number: 1 (lower is better) Translates to: HKVSCHPVINMALSL*HRGISLHYLKMTDM Trigger: CATGTCTGTCATTTTTAGGTAGTGTAGACTGATACCCCGATGCCACAGACTTAGGGCCATATTTATCACAGGGTGACAGGAAACCTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR CCA 90 bp | AAAGCATCAGGCGTCAGACAGAAACTTGTCAAAAACAGCTGTTGTTaGGTACTGATTGATAATGTTTTCATTCTGACGGCTGCGACGCCT | + |
|
Preference number: 1 (lower is better) Translates to: KASGVRQKLVKNSCC*VLIDNVFILTAATP Trigger: AGGCGTCGCAGCCGTCAGAATGAAAACATTATCAATCAGTACCCAACAACAGCTGTTTTTGACAAGTTTCTGTCTGACGCCTGATGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR GCA 90 bp | CTGATTTCTAGGAAAGGCCGATGCGTATGTTGCAGCTCGGTTTTATaGAGACTAATGACGTTAAAAATATTTGAGGAGTTCAGATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LISRKGRCVCCSSVL*RLMTLKIFEEFRFK Trigger: TTTGAATCTGAACTCCTCAAATATTTTTAACGTCATTAGTCTGCATAAAACCGAGCTGCAACATACGCATCGGCCTTTCCTAGAAATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR GCA 90 bp | TTCATTCAAACATTTCTGATTTCTAGGAAAGGCCGATGCGTATGTTaGAGCTCGGTTTTATGCAGACTAATGACGTTAAAAATATTTGAG | + |
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Preference number: 1 (lower is better) Translates to: FIQTFLISRKGRCVC*SSVLCRLMTLKIFE Trigger: CTCAAATATTTTTAACGTCATTAGTCTGCATAAAACCGAGCTGCAACATACGCATCGGCCTTTCCTAGAAATCAGAAATGTTTGAATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR GCA 90 bp | GCTAAGAAGGTACAAAAATGGGTCACTTCCATAAATATAACAAGATaGTCACTGAGGAAATACACAACAGACTGTTTTCCTATATCTTTG | + |
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Preference number: 1 (lower is better) Translates to: AKKVQKWVTSINITR*SLRKYTTDCFPISL Trigger: CAAAGATATAGGAAAACAGTCTGTTGTGTATTTCCTCAGTGAGCATCTTGTTATATTTATGGAAGTGACCCATTTTTGTACCTTCTTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCCTACAAGGGCGCGCAGGTGGTaGTCCCTTGCAGCAAAGCGC | + |
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Preference number: 2 (lower is better) Translates to: AREDDWVKFWAAIFTQPTRARRW*SLAAKR Trigger: GCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCT...TGTAGGCTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGTCCACATCATCCAGAGAGCAGGGCTGCAGGATCCAGCGCTTTCCACGGTGCTGGAGAGCGGAGTaGAGTTCGTTCCTAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SVSTSSREQGCRIQRFPRCWRAE*SSFLAV Trigger: AACTGCTAGGAACGAACTGCACTCCGCTCTCCAGCA...CCGTGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGATGATGTGGACACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR CAA 90 bp | CCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTGGTCCCTaGCAGCAAAGCGCTCGAAAACAAGTTGTCATCCTTGACTTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: PMQTKSYSGRAGGGP*QQSARKQVVILDLR Trigger: ACGCAAGTCAAGGATGACAACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCCTACACCACATGAGCCTTTCTaGGGTCTTCAGAACGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: AREDDWVKFWAAIFTQPTPHEPF*GLQNGS Trigger: AGACCCGTTCTGAAGACCTCAGAAAGGCTCATGTGG...TGTAGGCTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCCTCAGAGCCAGAGAAGATaGCTGGGTGAAGTTTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RAREDDWVKFWAAIFTQPQSQRR*LGEVLG Trigger: GCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCTG...AGGCTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR CCA 90 bp | CACATCATCCAGAGAGCAGGGCTGCAGGATCCAGCGCTTTCCACGGGCCAGTGGGCTTGTCTTGATGATTaGCCAATATCAAAAAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: HIIQRAGLQDPALSTGQWACLDD*PISKRV Trigger: TACCCTTTTTGATATTGGCCAATCATCAAGACAAGC...CCACTGGCCCGTGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGATGATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGCCTTTCTTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QNLLIPSPEKLVKPHEPFFRARR*WSLAAK Trigger: CTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAA...GAAAGGCTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGACATAGCTGTGGGTGCTaGAGAGCGGAGTGCAGTTCG | + |
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Preference number: 2 (lower is better) Translates to: FRTGLVSVSSIHFSTKQRHSCGC*RAECSS Trigger: CGAACTGCACTCCGCTCTCCAGCACCCACAGCTATG...TCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCGGGTCTCGTTTCTGTaGGTTCCATCCACTTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FRAREDDWVKFWAAIFTQRVSFL*VPSTLA Trigger: TGCTAAAGTGGATGGAACTCACAGAAACGAGACCCG...CTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR GCA 90 bp | ACGGGGTTCCTCTTTGAGCTTCATCAAACCCATGCCAGCTTAAGTCCTAACCGTAGTGGTGCCTGTTCTTaGCTAAACTGGTTCCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TGFLFELHQTHASLSPNRSGACS*LNWFPL Trigger: GAGTGGGAACCAGTTTAGGCAAGAACAGGCACCACT...ACGGTTAGGACTTAAGCTGGCATGGGTTTGATGAAGCTCAAAGAGGAACCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGATGCCAAGAAGAAGCAGTAAGACAGCGAGCTGCGACCTGCTAGACAAATCAGACAGAATCTTCTaGTCCCAAGTCCAGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: SRMPRRSSKTASCDLLDKSDRIF*SQVQRS Trigger: ACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGA...TTTGTCTAGCAGGTCGCAGCTCGCTGTCTTACTGCTTCTTCTTGGCATCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR-3UTR TCA 90 bp | AGACAAAGAAAGAGCCTTATTGACAGTTGTAAAGCATCAGGCGTCAGACAGAAACACTGTGCAGGGTTCTaGGGACTCTCCTCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RQRKSLIDSCKASGVRQKHCAGF*GLSSGE Trigger: CTCTCCAGAGGAGAGTCCTCAGAACCCTGCACAGTG...TTTCTGTCTGACGCCTGATGCTTTACAACTGTCAATAAGGCTCTTTCTTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCTTCTAACAAGTTTATaGGCTGGGAGAAGCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: FRAREDDWVKFWAAIFTQLLTSL*AGRSCP Trigger: AGGACAGCTTCTCCCAGCTCATAAACTTGTTAGAAG...CTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCCTACAGATTCAAATCAGTGGTaGCTGTTCTTGCCTAAACTG | + |
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Preference number: 2 (lower is better) Translates to: AREDDWVKFWAAIFTQPTDSNQW*LFLPKL Trigger: CAGTTTAGGCAAGAACAGGCACCACTGATTTGAATC...TGTAGGCTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGAGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTCAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NRRKRHAVKIISGNQRISQVVVP*SKALEN Trigger: GTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTG...ACTGATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCTCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGAGCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGGTCTCACATTCTCACTaGCTCGTGGTCTTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FRAREDDWVKFWAAIFTQVSHSH*LVVFFF Trigger: GAAGAAAAAGACCACGAGGCAGTGAGAATGTGAGAC...CTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCCTACAACGTTAGCAGAGAGATaGAAGTCTGAAATAGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: AREDDWVKFWAAIFTQPTTLAER*KSEIAR Trigger: TCTAGCTATTTCAGACTTTCATCTCTCTGCTAACGT...TGTAGGCTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGCCTTTCCGGGTCTCGTTTCTGTaGGTTCCATCCACTTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: QNLLIPSPEKLVKPHEPFRVSFL*VPSTLA Trigger: TGCTAAAGTGGATGGAACTCACAGAAACGAGACCCG...GAAAGGCTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 ENSMUST00000224858.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGTGTCTAATACGAATATaGCCCCTTGAGATCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: FRAREDDWVKFWAAIFTQCLIRI*PLEILG Trigger: ACCAAGGATCTCAAGGGGTCATATTCGTATTAGACA...CTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCGCCATTTTCACTCAGCCTACAAAGTCAATATCCTCACACACACAAGAAAGGCGTATCCATCGTGTaGAGTCTCAGACAGAATCTT | + |
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Preference number: 2 (lower is better) Translates to: GPPFSLSLQSQYPHTHKKGVSIV*SLRQNL Trigger: AAGATTCTGTCTGAGACTCCACACGATGGATACGCC...TTTCTTGTGTGTGTGAGGATATTGACTTTGTAGGCTGAGTGAAAATGGCGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAGATTTCAAAACGGCATTCTaGAATGGCACTGCCTTTATA | + |
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Preference number: 2 (lower is better) Translates to: TGLVSVSSIHFSTKQRRDFKTAF*NGTAFI Trigger: TATAAAGGCAGTGCCATTCCAGAATGCCGTTTTGAA...ATCTCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR CAA 90 bp | AGATGCTCACTGAGGAAATACACAACAGACTGTTTTCCTATATCTTaGAATATGCAAACCAAGACACCTGTGGCACCTCACACAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: RCSLRKYTTDCFPIS*NMQTKTPVAPHTKV Trigger: TACTTTTGTGTGAGGTGCCACAGGTGTCTTGGTTTGCATATTCAAAGATATAGGAAAACAGTCTGTTGTGTATTTCCTCAGTGAGCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR CAA 90 bp | TTTTTATTAAAATCCATTTACAAGATGAAATCACAAATACTGCATTaGAGCACTGTGCAGGGTTCTGAGGACTCTCCTCTGGAGAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: FLLKSIYKMKSQILH*STVQGSEDSPLESH Trigger: GTGACTCTCCAGAGGAGAGTCCTCAGAACCCTGCACAGTGCTCAAATGCAGTATTTGTGATTTCATCTTGTAAATGGATTTTAATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| 3UTR GCA 72 bp | AACCTGTGGTCGACACAACGTTCTCCGGGCTTTCGCTaGAGAGCTCGGACAGCAGGCTGGTTTTCCCGGAGC | + |
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Preference number: 3 (lower is better) Translates to: NLWSTQRSPGFR*RARTAGWFSRS Trigger: GCTCCGGGAAAACCAGCCTGCTGTCCGAGCTCTGCAGCGAAAGCCCGGAGAACGTTGTGTCGACCACAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR TCA 72 bp | AGAGCTCGGACAGCAGGCTGGTTTTCCCGGAGCCCGTaGGACCTATGCAAACCAAGTCATATTCAGGGCGCG | + |
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Preference number: 3 (lower is better) Translates to: RARTAGWFSRSP*DLCKPSHIQGA Trigger: CGCGCCCTGAATATGACTTGGTTTGCATAGGTCTCACGGGCTCCGGGAAAACCAGCCTGCTGTCCGAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGTCCACATCATCCAGAGAGCAGGGCTGCAGGATCCAGCGCTTTCCACGGTACGAATATGACCCCTaGAGATCCTTGGTAGTAGCG | + |
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Preference number: 3 (lower is better) Translates to: SVSTSSREQGCRIQRFPRYEYDP*RSLVVA Trigger: CGCTACTACCAAGGATCTCAAGGGGTCATATTCGTA...CCGTGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGATGATGTGGACACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAGAGCAGGGCTGCAGGATCCAGCGCTTTCCACGGGCCAGTGGTTCAAGTAGCTGCTGGCTTGTCTaGATGATTGGCCAATATCAA | + |
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Preference number: 3 (lower is better) Translates to: SREQGCRIQRFPRASGSSSCWLV*MIGQYQ Trigger: TTGATATTGGCCAATCATCAAGACAAGCCAGCAGCT...ACTTGAACCACTGGCCCGTGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR GCA 72 bp | CCAAGTCATATTCAGGGCGCGCAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAACAAGTTGTCATCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PSHIQGAQVVVP*SKALENKLSSL Trigger: CAAGGATGACAACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR CCA 72 bp | ACCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAGCGCTCGAAAACAAGT | + |
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Preference number: 3 (lower is better) Translates to: TYANQVIFRARR*WSLAAKRSKTS Trigger: ACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR CCA 72 bp | TATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTaGTCCCTTGCAGCAAAGCGCTCGAAAACAAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: YANQVIFRARRW*SLAAKRSKTSC Trigger: ACAACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGACAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGGCAGGTGGTGGTCCCTaGCAGCAAAGCGCTCGAAAA | + |
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Preference number: 3 (lower is better) Translates to: LRQNLLIPSPEKLVKPHEAGGGP*QQSARK Trigger: TTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGC...CTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAGACCCCTTGAGATCCTaGGTAGTAGCGGCTCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: FRTGLVSVSSIHFSTKQRDPLRS*VVAAPV Trigger: TACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTC...TCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR GCA 72 bp | GCCAATATCAAAAAGGGTAAAGTGCATAGCTGTGGGTaGTGGAGAGCGGAGTGCAGTTCGTTCCTAGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ANIKKGKVHSCG*WRAECSSFLAV Trigger: AACTGCTAGGAACGAACTGCACTCCGCTCTCCAGCACCCACAGCTATGCACTTTACCCTTTTTGATATTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| 3UTR TCA 72 bp | AGTCATCCTCTGAAGAGGCACTGTCTAATACGAATATaGCCCCTTGAGATCCTTGGTAGTAGCGGCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SHPLKRHCLIRI*PLEILGSSGSS Trigger: ACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTCATATTCGTATTAGACAGTGCCTCTTCAGAGGATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTAGACAAAGAAAGAGCCTTATTGACAGTTGTAAAGCATCAGGCGTCAGACTGCATTTAATGAACTaGCAGGGAGAGCAAAGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PARQRKSLIDSCKASGVRLHLMN*QGEQSP Trigger: CGGGCTTTGCTCTCCCTGCAAGTTCATTAAATGCAG...TCTGACGCCTGATGCTTTACAACTGTCAATAAGGCTCTTTCTTTGTCTAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| 3UTR GCA 72 bp | TGTCTTGATGATTGGCCAATATCAAAAAGGGTAAAGTaGATAGCTGTGGGTGCTGGAGAGCGGAGTGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLDDWPISKRVK*IAVGAGERSAV Trigger: AACTGCACTCCGCTCTCCAGCACCCACAGCTATGCACTTTACCCTTTTTGATATTGGCCAATCATCAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| 3UTR CCA 72 bp | AATATCAAAAAGGGTAAAGTGCATAGCTGTGGGTGCTaGAGAGCGGAGTGCAGTTCGTTCCTAGCAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NIKKGKVHSCGC*RAECSSFLAVS Trigger: AGAAACTGCTAGGAACGAACTGCACTCCGCTCTCCAGCACCCACAGCTATGCACTTTACCCTTTTTGATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| 3UTR CCA 72 bp | CTTGTACTGAGCGAGCTGCTGGCTTGTCTTGATGATTaGCCAATATCAAAAAGGGTAAAGTGCATAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLSELLACLDD*PISKRVKCIAV Trigger: CACAGCTATGCACTTTACCCTTTTTGATATTGGCCAATCATCAAGACAAGCCAGCAGCTCGCTCAGTACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATATGACCCCTTGAGATCCTTGGTAGTAGCGGCTCCAGTATTTCCGGATATTCTCAGTAGTGTGTACTaGACGTTAATGCCGATGATA | + |
|
Preference number: 3 (lower is better) Translates to: EYDPLRSLVVAAPVFPDILSSVY*TLMPMI Trigger: TATCATCGGCATTAACGTCAAGTACACACTACTGAG...AATATCCGGAAATACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTCATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| 3UTR GCA 72 bp | AGGAAAGGCCGATGCGTATGTTGCAGCTCGGTTTTATaGAGACTAATGACGTTAAAAATATTTGAGGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RKGRCVCCSSVL*RLMTLKIFEEF Trigger: GAACTCCTCAAATATTTTTAACGTCATTAGTCTGCATAAAACCGAGCTGCAACATACGCATCGGCCTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
||
| 3UTR CCA 72 bp | GGCGTCAGACAGAAACTTGTCAAAAACAGCTGTTGTTaGGTACTGATTGATAATGTTTTCATTCTGACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVRQKLVKNSCC*VLIDNVFILTA Trigger: AGCCGTCAGAATGAAAACATTATCAATCAGTACCCAACAACAGCTGTTTTTGACAAGTTTCTGTCTGACGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| 3UTR CCA 72 bp | AAAGAGGCAACCGCTTTAGCTAAGAAGGTACAAAAATaGGTCACTTCCATAAATATAACAAGATGCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: KEATALAKKVQK*VTSINITRCSL Trigger: CAGTGAGCATCTTGTTATATTTATGGAAGTGACCCATTTTTGTACCTTCTTAGCTAAAGCGGTTGCCTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR CCA 90 bp | AGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAAGGGCGCGCAGGTGGTaGTCCCTTGCAGCAAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGLVSVSSIHFSTKQRRRARRW*SLAAKR Trigger: GCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCT...TCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTCAGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGTTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFRTGLVSVSSIHFSTKQFRARR*WSLAAK Trigger: CTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAA...CTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCTGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| 3UTR CAA 72 bp | ACCAAGTCATATTCAGGGCGCGCAGGTGGTGGTCCCTaGCAGCAAAGCGCTCGAAAACAAGTTGTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKSYSGRAGGGP*QQSARKQVVIL Trigger: AAGGATGACAACTTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAATCAGTTCTCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAAGGGCGCGCAGGTGGTaGTCCCTTGCAGCAAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PENQFSLSSVYLTLMPMIRARRW*SLAAKR Trigger: GCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCT...TATCATCGGCATTAACGTCAAGTACACACTACTGAGAGAGAACTGATTCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGACAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRTGLVSVSSIHFSTKQRQVVVP*SKALEN Trigger: GTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTG...TCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR GCA 90 bp | ACCAACAGGAGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCCAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNRRKRHAVKIISGNQRIQVVVP*SKALEN Trigger: GTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTG...GATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCTCCTGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGATGCTGGAGAGCGGAGTaGAGTTCGTTCCTAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRTGLVSVSSIHFSTKQRCWRAE*SSFLAV Trigger: AACTGCTAGGAACGAACTGCACTCCGCTCTCCAGCA...TCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTTCTCTCCATAGCTGTGGGTGCTaGAGAGCGGAGTGCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKRHAVKIISGNQRISSLHSCGC*RAECSS Trigger: CGAACTGCACTCCGCTCTCCAGCACCCACAGCTATG...GAGAGAACTGATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| 3UTR CAA 72 bp | GCGAGCTGCGACCTGCTAGACAAAGAAAGAGCCTTATaGACAGTTGTAAAGCATCAGGCGTCAGACAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASCDLLDKERAL*TVVKHQASDRN Trigger: GTTTCTGTCTGACGCCTGATGCTTTACAACTGTCAATAAGGCTCTTTCTTTGTCTAGCAGGTCGCAGCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR TCA 90 bp | ACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAGATTTTGATCTCTTGTACTaGGCGAGCTGCTGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLVSVSSIHFSTKQRRDFDLLY*ASCWLV Trigger: GACAAGCCAGCAGCTCGCTCAGTACAAGAGATCAAA...ATCTCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGACAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGTGCTGGAGAGCGGAGTaGAGTTCGTTCCTAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQNLLIPSPEKLVKPHECWRAE*SSFLAV Trigger: AACTGCTAGGAACGAACTGCACTCCGCTCTCCAGCA...CTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR GCA 90 bp | AGACAAAGAAAGAGCCTTATTGACAGTTGTAAAGCATCAGGCGTCAGACAGAAATCCAGAGAGCAGGGCTaGAGGATCCAGCGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQRKSLIDSCKASGVRQKSREQG*RIQRFP Trigger: TGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGA...TTTCTGTCTGACGCCTGATGCTTTACAACTGTCAATAAGGCTCTTTCTTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR GCA 90 bp | AATCAGTTCTCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACTCCAGAGAGCAGGGCTaGAGGATCCAGCGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQFSLSSVYLTLMPMIIHSREQG*RIQRFP Trigger: TGGAAAGCGCTGGATCCTGCAGCCCTGCTCTCTGGA...GTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGAGAACTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGTTCTCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACCATAGCTGTGGGTGCTaGAGAGCGGAGTGCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NQFSLSSVYLTLMPMIIHHSCGC*RAECSS Trigger: CGAACTGCACTCCGCTCTCCAGCACCCACAGCTATG...GTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGAGAACTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTTAGTATTTTAATGAGTGGTCAAGTGTCTACAAGATATGCCAAAGAATTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPLSILMSGQVSTRYAKEFRARR*WSLAAK Trigger: CTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAA...TTCTTTGGCATATCTTGTAGACACTTGACCACTCATTAAAATACTAAGTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| 3UTR CAA 72 bp | TTGAGGAGTTCAGATTCAAATCAGTGGTGCCTGTTCTaGCCTAAACTGGTTCCCACTCCCTTAGCTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRSSDSNQWCLF*PKLVPTPLARM Trigger: CATCCTAGCTAAGGGAGTGGGAACCAGTTTAGGCAAGAACAGGCACCACTGATTTGAATCTGAACTCCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224858.2 |
||
| CDS-3UTR CCA 90 bp | AGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAAACAAGTTTATGAGCTaGGAGAAGCTGTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTGLVSVSSIHFSTKQRRNKFMS*EKLSFS Trigger: ACTGAAGGACAGCTTCTCCCAGCTCATAAACTTGTT...TCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGCCTTTCTGTCTAATACGAATATaGCCCCTTGAGATCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNLLIPSPEKLVKPHEPFCLIRI*PLEILG Trigger: ACCAAGGATCTCAAGGGGTCATATTCGTATTAGACA...GAAAGGCTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTTCTCTCCTTCTAACAAGTTTATaGGCTGGGAGAAGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRHAVKIISGNQRISSLLLTSL*AGRSCP Trigger: AGGACAGCTTCTCCCAGCTCATAAACTTGTTAGAAG...GAGAGAACTGATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | AATCAGTTCTCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACTGGTTTTCAGCTGGGTaGAAATTCTCCAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NQFSLSSVYLTLMPMIIHWFSAG*KFSSHQ Trigger: TTGGTGGCTGGAGAATTTTCACCCAGCTGAAAACCA...GTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGAGAACTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGACAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGCTTTCCACGGGCCAGTaGTTCAAGTTCAAAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: LRQNLLIPSPEKLVKPHELSTGQ*FKFKIL Trigger: AAGTATTTTGAACTTGAACCACTGGCCCGTGGAAAG...CTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | ACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAGATATTCTCACTGCCTCGTaGTCTTTTTCTTCTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLVSVSSIHFSTKQRRDILTAS*SFSSNK Trigger: CTTGTTAGAAGAAAAAGACCACGAGGCAGTGAGAAT...ATCTCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAATCAGTTCTCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATATGTCTAATACGAATATaGCCCCTTGAGATCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PENQFSLSSVYLTLMPMICLIRI*PLEILG Trigger: ACCAAGGATCTCAAGGGGTCATATTCGTATTAGACA...TATCATCGGCATTAACGTCAAGTACACACTACTGAGAGAGAACTGATTCTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | AGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAGTTCAAAATACTTTTTaGTCTCTTGTACTGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGLVSVSSIHFSTKQRRVQNTF*SLVLSE Trigger: CTCGCTCAGTACAAGAGATCAAAAAGTATTTTGAAC...TCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | ATCCATCGTGTGGAGTCTCAGACAGAATCTTCTGATCCCAAGTCCAGAGAAGTTGTTCAAAATACTTTTTaGTCTCTTGTACTGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHRVESQTESSDPKSREVVQNTF*SLVLSE Trigger: CTCGCTCAGTACAAGAGATCAAAAAGTATTTTGAAC...AACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGAGACTCCACACGATGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACCTGACTTATCTTCTAACAAGTTTATaGGCTGGGAGAAGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSVYLTLMPMIIHLTYLLTSL*AGRSCP Trigger: AGGACAGCTTCTCCCAGCTCATAAACTTGTTAGAAG...ATAAGTCAGGTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCGCCATTTTCACTCAGCCTACAAAGTCAATATCCTCACACACACAAGAAAGCTTGTCTTGATGATTaGCCAATATCAAAAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPPFSLSLQSQYPHTHKKACLDD*PISKRV Trigger: TACCCTTTTTGATATTGGCCAATCATCAAGACAAGC...TTTCTTGTGTGTGTGAGGATATTGACTTTGTAGGCTGAGTGAAAATGGCGGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR CCA 90 bp | ACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGAGAAGAGATGCTTGTCTTGATGATTaGCCAATATCAAAAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGLVSVSSIHFSTKQRRDACLDD*PISKRV Trigger: TACCCTTTTTGATATTGGCCAATCATCAAGACAAGC...ATCTCTTCTCTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTTCTCTCCTTTCCACGGGCCAGTaGTTCAAGTTCAAAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRHAVKIISGNQRISSLLSTGQ*FKFKIL Trigger: AAGTATTTTGAACTTGAACCACTGGCCCGTGGAAAG...GAGAGAACTGATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGAGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTTTGATGGTTTTCAGCTaGGTGAAAATTCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRRKRHAVKIISGNQRISLMVFS*VKILQP Trigger: TGGCTGGAGAATTTTCACCCAGCTGAAAACCATCAA...ACTGATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCTCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| 3UTR CAA 72 bp | AAATCCATTTACAAGATGAAATCACAAATACTGCATTaGAGCACTGTGCAGGGTTCTGAGGACTCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSIYKMKSQILH*STVQGSEDSPL Trigger: CAGAGGAGAGTCCTCAGAACCCTGCACAGTGCTCAAATGCAGTATTTGTGATTTCATCTTGTAAATGGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTTCTCTCTCAGTAGTGTGTAACGGCATTCTGGAATaGCACTGCCTTTATACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVKIISGNQRISSLSVVCNGILE*HCLYTK Trigger: TTTAGTATAAAGGCAGTGCCATTCCAGAATGCCGTT...ACACACTACTGAGAGAGAACTGATTCTCTGGTTACCACTAATTATCTTCACCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR CCA 90 bp | CCGATGATAATCCACCTGACTTATCAGAATAGTCACGTTAGCAGAGAGATGAAAAACAAGTTTATGAGCTaGGAGAAGCTGTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PMIIHLTYQNSHVSREMKNKFMS*EKLSFS Trigger: ACTGAAGGACAGCTTCTCCCAGCTCATAAACTTGTT...TTTCATCTCTCTGCTAACGTGACTATTCTGATAAGTCAGGTGGATTATCATCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACCTGACTTATAGCATGGAGTCTAAATaGTTGATGGTTTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSVYLTLMPMIIHLTYSMESK*LMVFSW Trigger: CCAGCTGAAAACCATCAACCATTTAGACTCCATGCT...ATAAGTCAGGTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACCTGACTTATTTCAAAACGGCATTCTaGAATGGCACTGCCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SLSSVYLTLMPMIIHLTYFKTAF*NGTAFI Trigger: TATAAAGGCAGTGCCATTCCAGAATGCCGTTTTGAA...ATAAGTCAGGTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACCTGACTTATATTCTCACTGCCTCGTaGTCTTTTTCTTCTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSVYLTLMPMIIHLTYILTAS*SFSSNK Trigger: CTTGTTAGAAGAAAAAGACCACGAGGCAGTGAGAAT...ATAAGTCAGGTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
||
| CDS-3UTR GCA 90 bp | AATCAGTTCTCTCTCAGTAGTGTGTACTTGACGTTAATGCCGATGATAATCCACATTCTGGAATGGCACTaGCTTTATACTAAAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQFSLSSVYLTLMPMIIHILEWH*LYTKTC Trigger: ACAGGTTTTAGTATAAAGGCAGTGCCATTCCAGAAT...GTGGATTATCATCGGCATTAACGTCAAGTACACACTACTGAGAGAGAACTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| CDS CCA 90 bp | CTTGGTAGTAGCGGCTCCAGTATTTCCGGATATTGTCAGCTCCTGTaGTCGACACAACGTTCTCCGGGCTTTCGCTGCAGAGCTCGGACA | + |
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Preference number: 5 (lower is better) Translates to: LGSSGSSISGYCQLL*STQRSPGFRCRART Trigger: TGTCCGAGCTCTGCAGCGAAAGCCCGGAGAACGTTGTGTCGACCACAGGAGCTGACAATATCCGGAAATACTGGAGCCGCTACTACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224068.2 |
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| CDS CCA 90 bp | GCCCGTGAGACCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAGCGCTCGAAAACACAGATAATCCAT | + |
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Preference number: 5 (lower is better) Translates to: ARETYANQVIFRARR*WSLAAKRSKTQIIH Trigger: ATGGATTATCTGTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGGTCTCACGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS-3UTR CAA 90 bp | AGAGCCAGAGAAGATGACTGGGTGAAGTTTTGGGCCGCCATTTTCACTCAGCCTGACCCCTTGAGATCCTaGGTAGTAGCGGCTCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RAREDDWVKFWAAIFTQPDPLRS*VVAAPV Trigger: TACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTC...AGGCTGAGTGAAAATGGCGGCCCAAAACTTCACCCAGTCATCTTCTCTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| CDS-3UTR CAA 90 bp | GTCTTCAGAACGGGTCTCGTTTCTGTGAGTTCCATCCACTTTAGCACAAAGCAGGCAGGTGGTGGTCCCTaGCAGCAAAGCGCTCGAAAA | + |
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Preference number: 5 (lower is better) Translates to: VFRTGLVSVSSIHFSTKQAGGGP*QQSARK Trigger: TTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGC...CTGCTTTGTGCTAAAGTGGATGGAACTCACAGAAACGAGACCCGTTCTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS CCA 90 bp | CGTGAGACCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTaGTCCCTTGCAGCAAAGCGCTCGAAAACACAGATAATCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: RETYANQVIFRARRW*SLAAKRSKTQIIHV Trigger: TACATGGATTATCTGTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGGTCTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS GCA 90 bp | CTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAACACAGATAATCCATGTACAGAAACG | + |
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Preference number: 5 (lower is better) Translates to: LCKPSHIQGAQVVVP*SKALENTDNPCTET Trigger: CGTTTCTGTACATGGATTATCTGTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGTTCTCTCGACCCCTTGAGATCCTaGGTAGTAGCGGCTCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RKRHAVKIISGNQRISSLDPLRS*VVAAPV Trigger: TACTGGAGCCGCTACTACCAAGGATCTCAAGGGGTC...GAGAGAACTGATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS-3UTR CAA 90 bp | TCCATTTACAAGATGAAATCACAAATACTGCATTTGAGCACTGTGCAGGGTTCTGCAGGTGGTGGTCCCTaGCAGCAAAGCGCTCGAAAA | + |
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Preference number: 5 (lower is better) Translates to: SIYKMKSQILHLSTVQGSAGGGP*QQSARK Trigger: TTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGC...AGAACCCTGCACAGTGCTCAAATGCAGTATTTGTGATTTCATCTTGTAAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091201.7 |
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| CDS-3UTR CAA 90 bp | GTGGAGTCTCAGACAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCTACGAATATGACCCCTaGAGATCCTTGGTAGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: VESQTESSDPKSREVSETYEYDP*RSLVVA Trigger: CGCTACTACCAAGGATCTCAAGGGGTCATATTCGTA...GGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGAGACTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS-3UTR CAA 90 bp | CAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCACATGAGCCTTTCCAGTATTTCCGGATATaGTCAGCTCCTGTGGTCGAC | + |
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Preference number: 5 (lower is better) Translates to: QNLLIPSPEKLVKPHEPFQYFRI*SAPVVD Trigger: GTCGACCACAGGAGCTGACAATATCCGGAAATACTG...GAAAGGCTCATGTGGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224068.2 |
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| CDS-3UTR CAA 90 bp | GTGGAGTCTCAGACAGAATCTTCTGATCCCAAGTCCAGAGAAGTTAGTGAAACCATGGAGTCTAAATGGTaGATGGTTTTCAGCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VESQTESSDPKSREVSETMESKW*MVFSWV Trigger: CACCCAGCTGAAAACCATCAACCATTTAGACTCCAT...GGTTTCACTAACTTCTCTGGACTTGGGATCAGAAGATTCTGTCTGAGACTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224858.2 |
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| CDS-3UTR CAA 90 bp | ACCAACAGGAGGAAGAGACATGCGGTGAAGATAATTAGTGGTAACCAGAGAATCAGCTGCTGGCTTGTCTaGATGATTGGCCAATATCAA | + |
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Preference number: 5 (lower is better) Translates to: TNRRKRHAVKIISGNQRISCWLV*MIGQYQ Trigger: TTGATATTGGCCAATCATCAAGACAAGCCAGCAGCT...GATTCTCTGGTTACCACTAATTATCTTCACCGCATGTCTCTTCCTCCTGTTGGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS-3UTR CAA 90 bp | CCGATGATAATCCACCTGACTTATCAGAATAGTCACGTTAGCAGAGAGATGAAAAGCTGCTGGCTTGTCTaGATGATTGGCCAATATCAA | + |
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Preference number: 5 (lower is better) Translates to: PMIIHLTYQNSHVSREMKSCWLV*MIGQYQ Trigger: TTGATATTGGCCAATCATCAAGACAAGCCAGCAGCT...TTTCATCTCTCTGCTAACGTGACTATTCTGATAAGTCAGGTGGATTATCATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS GCA 72 bp | CTCCTGTGGTCGACACAACGTTCTCCGGGCTTTCGCTaGAGAGCTCGGACAGCAGGCTGGTTTTCCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLWSTQRSPGFR*RARTAGWFSRS Trigger: GCTCCGGGAAAACCAGCCTGCTGTCCGAGCTCTGCAGCGAAAGCCCGGAGAACGTTGTGTCGACCACAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224068.2 |
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| CDS CCA 72 bp | AGCGGCTCCAGTATTTCCGGATATTGTCAGCTCCTGTaGTCGACACAACGTTCTCCGGGCTTTCGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGSSISGYCQLL*STQRSPGFRCR Trigger: TCTGCAGCGAAAGCCCGGAGAACGTTGTGTCGACCACAGGAGCTGACAATATCCGGAAATACTGGAGCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224068.2 |
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| CDS CCA 72 bp | ACCTATGCAAACCAAGTCATATTCAGGGCGCGCAGGTaGTGGTCCCTTGCAGCAAAGCGCTCGAAAACACAG | + |
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Preference number: 6 (lower is better) Translates to: TYANQVIFRARR*WSLAAKRSKTQ Trigger: CTGTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS GCA 72 bp | CCAAGTCATATTCAGGGCGCGCAGGTGGTGGTCCCTTaGAGCAAAGCGCTCGAAAACACAGATAATCCATGT | + |
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Preference number: 6 (lower is better) Translates to: PSHIQGAQVVVP*SKALENTDNPC Trigger: ACATGGATTATCTGTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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| CDS CCA 72 bp | TATGCAAACCAAGTCATATTCAGGGCGCGCAGGTGGTaGTCCCTTGCAGCAAAGCGCTCGAAAACACAGATA | + |
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Preference number: 6 (lower is better) Translates to: YANQVIFRARRW*SLAAKRSKTQI Trigger: TATCTGTGTTTTCGAGCGCTTTGCTGCAAGGGACCACCACCTGCGCGCCCTGAATATGACTTGGTTTGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091201.7 ENSMUST00000224068.2 |
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