RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARL14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000098207

Ensembl transcript IDs: ENSMUST00000183126.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACTTCCCCCACTTTACATaGGAAATAAAACAGATTTCC +
Preference number: 2 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADFPHFT*EIKQIS
Trigger: GGAAATCTGTTTTATTTCCCATGTAAAGTGGGGGAA...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR GCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACACCGCACAGCAGGGTTaGACATACCAGTTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADTAQQG*TYQFRL
Trigger: CAACCGGAACTGGTATGTGCAACCCTGCTGTGCGGT...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACCCGAGGAGAAGAATGTaGGCTTGCTTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADPRRRM*ACLLWG
Trigger: CCCCCAAAGCAAGCAAGCCCACATTCTTCTCCTCGG...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR GCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACAGTGTGAGACTGCTCTaGAGCTGGACCATTTCCACG +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADSVRLL*SWTIST
Trigger: CGTGGAAATGGTCCAGCTGCAGAGCAGTCTCACACT...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR TCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACACTCGGTTAATTTCCTaGACCCGTCATCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADTRLIS*TRHPAL
Trigger: AAGGGCTGGATGACGGGTTCAGGAAATTAACCGAGT...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR GCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACCATACCAGTTCCGGTTaGTGCACAGCTTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADHTSSG*CTASSP
Trigger: AGGTGAAGAAGCTGTGCAGCAACCGGAACTGGTATG...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR TCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACGATGGTTGGGATGGTTaGGAGAGTCTCAGCAAACTT +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADDGWDG*ESLSKL
Trigger: AAGTTTGCTGAGACTCTCTCAACCATCCCAACCATC...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR TCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACCGACCGGTGTGTTTTTaGTGTGCTCGTTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADRPVCF*CARSSK
Trigger: TTTTGAAGAACGAGCACATCAAAAACACACCGGTCG...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACTGGGCTTGCTTGCTTTaGGGGTTTTTAGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADWACLL*GFLEFS
Trigger: GCTGAATTCTAAAAACCCCCAAAGCAAGCAAGCCCA...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR GCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACAGAAGAATGTGGGCTTaGTTGCTTTGGGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADRRMWA*LLWGFL
Trigger: TAAAAACCCCCAAAGCAAGCAAGCCCACATTCTTCT...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR TCA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACTCTTCAAAATGTGTTTaGACTCTTTGCGAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADSSKCV*TLCESL
Trigger: AAGACTCTCGCAAAGAGTTCAAACACATTTTGAAGA...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS GCA 90 bp CTGAACCCGTCATCCAGCCCTTCTCCAGTGACCGCACAGCAGGGTTaGACATACCAGTTCCGGTTGCTGCACAGCTTCTTCACCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LNPSSSPSPVTAQQG*TYQFRLLHSFFTLN
Trigger: GTTCAAGGTGAAGAAGCTGTGCAGCAACCGGAACTGGTATGTGCAACCCTGCTGTGCGGTCACTGGAGAAGGGCTGGATGACGGGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACGGCAAGTCCTGTTTGTaGGCCAGTATGACGACCGGT +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADGKSCL*ASMTTG
Trigger: ACCGGTCGTCATACTGGCCAACAAACAGGACTTGCC...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACTCTTCCAGTCGCTTTTaGCCTTCGGAACAGTCCACC +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADSSSRF*PSEQST
Trigger: GGTGGACTGTTCCGAAGGCAAAAAGCGACTGGAAGA...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACACATACCAGTTCCGGTaGCTGCACAGCTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADTYQFR*LHSFFT
Trigger: GGTGAAGAAGCTGTGCAGCAACCGGAACTGGTATGT...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACCGATGGTTGGGATGGTaGAGAGAGTCTCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADRWLGW*RESQQT
Trigger: AGTTTGCTGAGACTCTCTCAACCATCCCAACCATCG...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACGAGAAGAATGTGGGCTaGCTTGCTTTGGGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADEKNVG*LALGVF
Trigger: AAAAACCCCCAAAGCAAGCAAGCCCACATTCTTCTC...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACATGTGTTTGAACTCTTaGCGAGAGTCTTCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADMCLNS*RESSSR
Trigger: GCGACTGGAAGACTCTCGCAAAGAGTTCAAACACAT...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACCACAGCTTCTTCACCTaGAACATCCTGGTGATGTCT +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADHSFFT*NILVMS
Trigger: AGACATCACCAGGATGTTCAAGGTGAAGAAGCTGTG...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACTTGCTAAGGTCTCTCTaGTCCTTCGGTAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADLLRSL*SFGSFS
Trigger: TGAAAAGCTACCGAAGGACAAGAGAGACCTTAGCAA...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS-3UTR CAA 90 bp AAAGTTCCTTCTTTAGCTGAGCAGGGTGGAAACCACCCCCAAAAGTTTGCCGACTTCTTCAAAATGTGTTaGAACTCTTTGCGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: KVPSLAEQGGNHPQKFADFFKMC*NSLRES
Trigger: AGACTCTCGCAAAGAGTTCAAACACATTTTGAAGAA...GTCGGCAAACTTTTGGGGGTGGTTTCCACCCTGCTCAGCTAAAGAAGGAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 90 bp CAGGGTTGCACATACCAGTTCCGGTTGCTGCACAGCTTCTTCACCTaGAACATCCTGGTGATGTCTTCGGCGCTCAGAGCTCCCGGCAAG +
Preference number: 6 (lower is better)
Translates to: QGCTYQFRLLHSFFT*NILVMSSALRAPGK
Trigger: CTTGCCGGGAGCTCTGAGCGCCGAAGACATCACCAGGATGTTCAAGGTGAAGAAGCTGTGCAGCAACCGGAACTGGTATGTGCAACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS GCA 72 bp CCTCCAACATCCCACACGGTGAGTGTGAGACTGCTCTaGAGCTGGACCATTTCCACGTTGAAGCCGATGGTT +
Preference number: 6 (lower is better)
Translates to: PPTSHTVSVRLL*SWTISTLKPMV
Trigger: AACCATCGGCTTCAACGTGGAAATGGTCCAGCTGCAGAGCAGTCTCACACTCACCGTGTGGGATGTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CCA 72 bp ACATCCCACACGGTGAGTGTGAGACTGCTCTGCAGCTaGACCATTTCCACGTTGAAGCCGATGGTTGGGATG +
Preference number: 6 (lower is better)
Translates to: TSHTVSVRLLCS*TISTLKPMVGM
Trigger: CATCCCAACCATCGGCTTCAACGTGGAAATGGTCCAGCTGCAGAGCAGTCTCACACTCACCGTGTGGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 90 bp CTGGTGATGTCTTCGGCGCTCAGAGCTCCCGGCAAGTCCTGTTTGTaGGCCAGTATGACGACCGGTGTGTTTTTGATGTGCTCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LVMSSALRAPGKSCL*ASMTTGVFLMCSFF
Trigger: GAAGAACGAGCACATCAAAAACACACCGGTCGTCATACTGGCCAACAAACAGGACTTGCCGGGAGCTCTGAGCGCCGAAGACATCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 90 bp ATCCTGGTGATGTCTTCGGCGCTCAGAGCTCCCGGCAAGTCCTGTTaGTTGGCCAGTATGACGACCGGTGTGTTTTTGATGTGCTCGTTC +
Preference number: 6 (lower is better)
Translates to: ILVMSSALRAPGKSC*LASMTTGVFLMCSF
Trigger: GAACGAGCACATCAAAAACACACCGGTCGTCATACTGGCCAACAAACAGGACTTGCCGGGAGCTCTGAGCGCCGAAGACATCACCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 72 bp TTTGCCTTCGGAACAGTCCACCACGTACATCAGCCCTaGAGCGTTCTCACAGTAGCAGTCCCAGACTGTTCG +
Preference number: 6 (lower is better)
Translates to: FAFGTVHHVHQP*SVLTVAVPDCS
Trigger: CGAACAGTCTGGGACTGCTACTGTGAGAACGCTCAAGGGCTGATGTACGTGGTGGACTGTTCCGAAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 72 bp AGTGTGAGACTGCTCTGCAGCTGGACCATTTCCACGTaGAAGCCGATGGTTGGGATGGTTGAGAGAGTCTCA +
Preference number: 6 (lower is better)
Translates to: SVRLLCSWTIST*KPMVGMVERVS
Trigger: TGAGACTCTCTCAACCATCCCAACCATCGGCTTCAACGTGGAAATGGTCCAGCTGCAGAGCAGTCTCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 72 bp TGTTTGAACTCTTTGCGAGAGTCTTCCAGTCGCTTTTaGCCTTCGGAACAGTCCACCACGTACATCAGCCCT +
Preference number: 6 (lower is better)
Translates to: CLNSLRESSSRF*PSEQSTTYISP
Trigger: AGGGCTGATGTACGTGGTGGACTGTTCCGAAGGCAAAAAGCGACTGGAAGACTCTCGCAAAGAGTTCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 90 bp CCCGGCAAGTCCTGTTTGTTGGCCAGTATGACGACCGGTGTGTTTTaGATGTGCTCGTTCTTCAAAATGTGTTTGAACTCTTTGCGAGAG +
Preference number: 6 (lower is better)
Translates to: PGKSCLLASMTTGVF*MCSFFKMCLNSLRE
Trigger: CTCTCGCAAAGAGTTCAAACACATTTTGAAGAACGAGCACATCAAAAACACACCGGTCGTCATACTGGCCAACAAACAGGACTTGCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 72 bp TTGATGTGCTCGTTCTTCAAAATGTGTTTGAACTCTTaGCGAGAGTCTTCCAGTCGCTTTTTGCCTTCGGAA +
Preference number: 6 (lower is better)
Translates to: LMCSFFKMCLNS*RESSSRFLPSE
Trigger: TTCCGAAGGCAAAAAGCGACTGGAAGACTCTCGCAAAGAGTTCAAACACATTTTGAAGAACGAGCACATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2
CDS CAA 72 bp TCCTGTTTGTTGGCCAGTATGACGACCGGTGTGTTTTaGATGTGCTCGTTCTTCAAAATGTGTTTGAACTCT +
Preference number: 6 (lower is better)
Translates to: SCLLASMTTGVF*MCSFFKMCLNS
Trigger: AGAGTTCAAACACATTTTGAAGAACGAGCACATCAAAAACACACCGGTCGTCATACTGGCCAACAAACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183126.2