Pregenerated sensors for ARL13B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022911Ensembl transcript IDs: ENSMUST00000089289.6, ENSMUST00000232561.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGTAAACCAGAGCATCGATGCCATGACTGCTTACGTGGCCAGATaGTCTTTTCAGCTACTGGTCATTTTGTTTCCTTTCTGCTTTAAC | + |
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Preference number: 1 (lower is better) Translates to: CVNQSIDAMTAYVAR*SFQLLVILFPFCFN Trigger: GTTAAAGCAGAAAGGAAACAAAATGACCAGTAGCTGAAAAGAGCATCTGGCCACGTAAGCAGTCATGGCATCGATGCTCTGGTTTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CCA 90 bp | TTATGGTTGTCTTGCCCATCATCAGCATTCAGGGCTTTTCTGCTTTaGGGAAAGGTCTCAGTTCACCTTGCTGATATAAAAAGGACCAAC | + |
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Preference number: 1 (lower is better) Translates to: LWLSCPSSAFRAFLL*GKVSVHLADIKRTN Trigger: GTTGGTCCTTTTTATATCAGCAAGGTGAACTGAGACCTTTCCCCAAAGCAGAAAAGCCCTGAATGCTGATGATGGGCAAGACAACCATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CCA 90 bp | TATCAGGTCAAGTTCTTGGATATTCTTTCTTCCCTGAAATCATTATaGTTGTCTTGCCCATCATCAGCATTCAGGGCTTTTCTGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: YQVKFLDILSSLKSL*LSCPSSAFRAFLLW Trigger: CCAAAGCAGAAAAGCCCTGAATGCTGATGATGGGCAAGACAACCATAATGATTTCAGGGAAGAAAGAATATCCAAGAACTTGACCTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR TCA 90 bp | AGATTATTAAATAATCAGGTATGTAGAGTCCATTGGCTCAACTTGTaGGGTTTTTCTTCAGGAGTATGTCCAAAAGTCGGGATGTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: RLLNNQVCRVHWLNL*GFSSGVCPKVGMCK Trigger: TTTACACATCCCGACTTTTGGACATACTCCTGAAGAAAAACCTCACAAGTTGAGCCAATGGACTCTACATACCTGATTATTTAATAATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR TCA 90 bp | TATTGTCATCTAAAATTAAGAAGTCATGTTAGAACTAGTGCTTTATaGAAGGACTTGCACCAACATCTTTATTTGTACAGCCATGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: YCHLKLRSHVRTSAL*KDLHQHLYLYSHAG Trigger: GCCAGCATGGCTGTACAAATAAAGATGTTGGTGCAAGTCCTTTCATAAAGCACTAGTTCTAACATGACTTCTTAATTTTAGATGACAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | CATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTAATTTTGCATATATGTGCACAGAGAGGGCCCTaGACTCAGAGAAGGTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: HPVLWFSYVSHLLILHICAQRGP*TQRRSS Trigger: ACTAGACCTTCTCTGAGTTCAGGGCCCTCTCTGTGC...ACATATATGCAAAATTAGCAGGTGGCTCACATAAGAGAACCACAAGACAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAAAGGGCTTTTCTGCTTTaGGGAAAGGTCTCAGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: FGKGPLDREPYQWHSRAERAFLL*GKVSVH Trigger: GTGAACTGAGACCTTTCCCCAAAGCAGAAAAGCCCT...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTCAGTTCACCTTGCTaGTATAAAAAGGACCAACCC | + |
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Preference number: 2 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLLSSPC*YKKDQP Trigger: GGGTTGGTCCTTTTTATATCAGCAAGGTGAACTGAG...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CAA 90 bp | CAGGTCAAGTTCTTGGATATTCTTTCTTCCCTGAAATCATTATGGTaGTCTTGCCCATCATCAGCATTCAGGGCTTTTCTGCTTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QVKFLDILSSLKSLW*SCPSSAFRAFLLWG Trigger: TCCCCAAAGCAGAAAAGCCCTGAATGCTGATGATGGGCAAGACAACCATAATGATTTCAGGGAAGAAAGAATATCCAAGAACTTGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAAAGAACTAGTGCTTTATaGAAGGACTTGCACCAACAT | + |
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Preference number: 2 (lower is better) Translates to: FGKGPLDREPYQWHSRAERTSAL*KDLHQH Trigger: ATGTTGGTGCAAGTCCTTTCATAAAGCACTAGTTCT...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTGTGCCAAGTACAATaGACAAACTCACAGAAACAC | + |
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Preference number: 2 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLLCQVQ*TNSQKH Trigger: GTGTTTCTGTGAGTTTGTTCATTGTACTTGGCACAG...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR GCA 90 bp | CATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTAATTTTGCATATATGTCATTCAGGGCTTTTCTaGTTTGGGGAAAGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HPVLWFSYVSHLLILHICHSGLF*FGERSQ Trigger: CTGAGACCTTTCCCCAAAGCAGAAAAGCCCTGAATG...ACATATATGCAAAATTAGCAGGTGGCTCACATAAGAGAACCACAAGACAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CAA 90 bp | ATGACTGCTTACGTGGCCAGATGCTCTTTTCAGCTACTGGTCATTTaGTTTCCTTTCTGCTTTAACCACAGAAGATGGAGAAGTACATTA | + |
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Preference number: 2 (lower is better) Translates to: MTAYVARCSFQLLVI*FPFCFNHRRWRSTL Trigger: TAATGTACTTCTCCATCTTCTGTGGTTAAAGCAGAAAGGAAACAAAATGACCAGTAGCTGAAAAGAGCATCTGGCCACGTAAGCAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | TTAATTTCAAGGCATGGACGAAAGAAAACAACCCAAGCAGTCAATGAAGCTGCTCATTGGCTCAACTTGTaGGGTTTTTCTTCAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: LISRHGRKKTTQAVNEAAHWLNL*GFSSGV Trigger: TACTCCTGAAGAAAAACCTCACAAGTTGAGCCAATG...AGCAGCTTCATTGACTGCTTGGGTTGTTTTCTTTCGTCCATGCCTTGAAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | CATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTAATTTTGCATATATGTCATCACCAAGGAAAATaGACAGCAACAACAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: HPVLWFSYVSHLLILHICHHQGK*TATTEL Trigger: CAGTTCTGTTGTTGCTGTTCATTTTCCTTGGTGATG...ACATATATGCAAAATTAGCAGGTGGCTCACATAAGAGAACCACAAGACAGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGAGGCATGCCTCCAATTaGATATTACCTTATAAATCC | + |
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Preference number: 2 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLRHASN*ILPYKS Trigger: GGATTTATAAGGTAATATTCAATTGGAGGCATGCCT...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGGCTCTTTTCAGCTACTaGTCATTTTGTTTCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLALFSY*SFCFLS Trigger: AGAAAGGAAACAAAATGACCAGTAGCTGAAAAGAGC...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR TCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAATTGTTATTTTCACCTTaGCTTAAAGGCATGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKLLFSP*LKGMPP Trigger: TGGAGGCATGCCTTTAAGTCAAGGTGAAAATAACAA...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTTCATTATGGTTGTCTTaGCCATCATCAGCATTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALTTEDGEVHYQVKFLDISLWLS*PSSAFR Trigger: CCTGAATGCTGATGATGGGCAAGACAACCATAATGA...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR GCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAAATTTTGTTTCCTTTCTaGTTTAACCACAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKILFPF*FNHRRW Trigger: CCATCTTCTGTGGTTAAAGCAGAAAGGAAACAAAAT...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTTCCCTGAAATCATTATaGTTGTCTTGCCCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: ALTTEDGEVHYQVKFLDISLKSL*LSCPSS Trigger: TGATGATGGGCAAGACAACCATAATGATTTCAGGGA...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CCA 90 bp | TTAATTTCAAGGCATGGACGAAAGAAAACAACCCAAGCAGTCAATGAAGCTGCTTTTAACCACAGAAGATaGAGAAGTACATTATCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LISRHGRKKTTQAVNEAAFNHRR*RSTLSG Trigger: ACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAA...AGCAGCTTCATTGACTGCTTGGGTTGTTTTCTTTCGTCCATGCCTTGAAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACTGAAATCATTATGGTaGTCTTGCCCATCATCAGCA | + |
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Preference number: 3 (lower is better) Translates to: FGKGPLDREPYQWHSRAELKSLW*SCPSSA Trigger: TGCTGATGATGGGCAAGACAACCATAATGATTTCAG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CAA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGTTTGGTAAAGGGCCGTaGGACAGAGAACCTTATCAA | + |
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Preference number: 3 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLFGKGP*DREPYQ Trigger: TTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CCA 72 bp | TCTTGCCCATCATCAGCATTCAGGGCTTTTCTGCTTTaGGGAAAGGTCTCAGTTCACCTTGCTGATATAAAA | + |
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Preference number: 3 (lower is better) Translates to: SCPSSAFRAFLL*GKVSVHLADIK Trigger: TTTTATATCAGCAAGGTGAACTGAGACCTTTCCCCAAAGCAGAAAAGCCCTGAATGCTGATGATGGGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTCAGGGCTTTTCTGCTTaGGGGAAAGGTCTCAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: ALTTEDGEVHYQVKFLDIQGFSA*GKGLSS Trigger: TGAACTGAGACCTTTCCCCAAAGCAGAAAAGCCCTG...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CAA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGACAAAGCATACATGCTaGTACACTTCAAGTGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLTKHTC*YTSSVY Trigger: GTACACACTTGAAGTGTACAAGCATGTATGCTTTGT...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR TCA 72 bp | AATAATCAGGTATGTAGAGTCCATTGGCTCAACTTGTaGGGTTTTTCTTCAGGAGTATGTCCAAAAGTCGGG | + |
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Preference number: 3 (lower is better) Translates to: NNQVCRVHWLNL*GFSSGVCPKVG Trigger: CCCGACTTTTGGACATACTCCTGAAGAAAAACCTCACAAGTTGAGCCAATGGACTCTACATACCTGATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CCA 72 bp | ACTAAAATATCTCTACAAGTTTTGGTAAAGGGCCGTTaGACAGAGAACCTTATCAATGGCACTCAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TKISLQVLVKGR*TENLINGTQEQ Trigger: CTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAAACTTGTAGAGATATTTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR-3UTR CAA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAATATCAGGTCAAGTTCTaGGATATTCTTTCTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKYQVKF*DILSSL Trigger: CAGGGAAGAAAGAATATCCAAGAACTTGACCTGATA...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| 3UTR CCA 72 bp | TTTAAAAGGCAAATGATCAGATCAATCTACCTTAGGTaGACTTACATTCAGAAACCAGTGTATGTTCATTGC | + |
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Preference number: 3 (lower is better) Translates to: FKRQMIRSIYLR*TYIQKPVYVHC Trigger: GCAATGAACATACACTGGTTTCTGAATGTAAGTCCACCTAAGGTAGATTGATCTGATCATTTGCCTTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR TCA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACGCAAGAACTGGTCCTaGGTCAATCTCAGCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: FGKGPLDREPYQWHSRAERKNWS*VNLSQT Trigger: GGTCTGGCTGAGATTGACTCAGGACCAGTTCTTGCG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR GCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAAGACCCTCGCTGGTCCTaGTCATCCTCACTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKDPRWS*SSSLSS Trigger: GCTGGACAGTGAGGATGAGCAGGACCAGCGAGGGTC...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR GCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAATTGGAGGCAGCAATCTaGCTCACTCTGAGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKLEAAI*LTLRRC Trigger: GCAGCGCCTCAGAGTGAGGCAGATTGCTGCCTCCAA...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR GCA 90 bp | TTAATTTCAAGGCATGGACGAAAGAAAACAACCCAAGCAGTCAATGAAGCTGCTGCCCCCTCCTTGTCTTaGTTGTTGGCCAGCACCAAT | + |
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Preference number: 4 (lower is better) Translates to: LISRHGRKKTTQAVNEAAAPSLS*LLASTN Trigger: ATTGGTGCTGGCCAACAAGCAAGACAAGGAGGGGGC...AGCAGCTTCATTGACTGCTTGGGTTGTTTTCTTTCGTCCATGCCTTGAAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGTCAGGATGCTCTCCTTaGATTCCCTTTGCTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLSGCSP*IPFAVA Trigger: AGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGA...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTACAGGAGGGGGAGGTTaGGGAGGCGTGGGACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: ALTTEDGEVHYQVKFLDITGGGG*GGVGLF Trigger: AAAGAGTCCCACGCCTCCCCAACCTCCCCCTCCTGT...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR TCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAAGAACAAGGTTCGATCTaGCACAGGCACTTGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKEQGSI*HRHLCS Trigger: CGAGCACAAGTGCCTGTGTCAGATCGAACCTTGTTC...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | TTAATTTCAAGGCATGGACGAAAGAAAACAACCCAAGCAGTCAATGAAGCTGCTTCTCAGCCAGACCACTaGTCCCATCAAGTTCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: LISRHGRKKTTQAVNEAASQPDH*SHQVPS Trigger: AGACGGAACTTGATGGGACCAGTGGTCTGGCTGAGA...AGCAGCTTCATTGACTGCTTGGGTTGTTTTCTTTCGTCCATGCCTTGAAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTGACTCTGACCCTCGCTaGTCCTGCTCATCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: ALTTEDGEVHYQVKFLDIDSDPR*SCSSSL Trigger: CAGTGAGGATGAGCAGGACCAGCGAGGGTCAGAGTC...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGAGGCGTGGGACTCTTTaGAGTAGACTCGTCTGTATT | + |
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Preference number: 4 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLRRGTL*SRLVCI Trigger: AATACAGACGAGTCTACTCCAAAGAGTCCCACGCCT...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR TCA 90 bp | TTAATTTCAAGGCATGGACGAAAGAAAACAACCCAAGCAGTCAATGAAGCTGCTTATGAGATCGTGTCCTaGGCATCACCGTTAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LISRHGRKKTTQAVNEAAYEIVS*ASPLGL Trigger: GAGACCTAACGGTGATGCTCAGGACACGATCTCATA...AGCAGCTTCATTGACTGCTTGGGTTGTTTTCTTTCGTCCATGCCTTGAAATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGACAGCTGCAATGGGTTaGAAAGGATTCGCAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLTAAMG*KGFART Trigger: AGTTCTTGCGAATCCTTTCCAACCCATTGCAGCTGT...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTCGCTCGTCAGGGTTTTaGAGGCAGCAATCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ALTTEDGEVHYQVKFLDIRSSGF*RQQSAS Trigger: TGAGGCAGATTGCTGCCTCCAAAACCCTGACGAGCG...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR TCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGACTGGTTCTACCCGATaGCTCCTTTTCATTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLTGSTR*LLFILS Trigger: ACTAAGAATGAAAAGGAGTCATCGGGTAGAACCAGT...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR GCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAACCATCAAGTTCCGTCTaGTCTCGTTCTCTTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKPSSSV*SRSLSS Trigger: GGAAGAAAGAGAACGAGAGCAGACGGAACTTGATGG...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS-3UTR CCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAACTCGTCTGTATTGACTaGTTCTACCCGATGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKLVCID*FYPMTP Trigger: AGGAGTCATCGGGTAGAACCAGTCAATACAGACGAG...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACAAAGTCCTTTGCAATaGTATGCAGTAGCCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGKGPLDREPYQWHSRAEQSPLQ*YAVANK Trigger: TTTATTGGCTACTGCATATCATTGCAAAGGACTTTG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR GCA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGTTGTGTCTTTCTGGATaGGTTCACTTAAGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLLCLSG*VHLRHQ Trigger: TTGATGCCTTAAGTGAACGCATCCAGAAAGACACAA...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR GCA 90 bp | TTAATTTCAAGGCATGGACGAAAGAAAACAACCCAAGCAGTCAATGAAGCTGCTTCCTTCTCCACGGTCTaGTTCTTTTTCTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LISRHGRKKTTQAVNEAASFSTV*FFFSFS Trigger: GGAAAAAGAGAAAAAGAAGCAGACCGTGGAGAAGGA...AGCAGCTTCATTGACTGCTTGGGTTGTTTTCTTTCGTCCATGCCTTGAAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| 3UTR CAA 72 bp | TTCTTGGATATTCTTTCTTCCCTGAAATCATTATGGTaGTCTTGCCCATCATCAGCATTCAGGGCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLDILSSLKSLW*SCPSSAFRAFL Trigger: CAGAAAAGCCCTGAATGCTGATGATGGGCAAGACAACCATAATGATTTCAGGGAAGAAAGAATATCCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR TCA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAATCTTTTCATTCTCAATaGTTACAGCTGCAATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKSFHSQ*LQLQWV Trigger: AACCCATTGCAGCTGTAATCATTGAGAATGAAAAGA...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR GCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTCTCAATGATTACAGCTaGAATGGGTTGGAAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALTTEDGEVHYQVKFLDILNDYS*NGLERI Trigger: AATCCTTTCCAACCCATTGCAGCTGTAATCATTGAG...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CCA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTTCAAAGATGGTAACTTaGAACTTTCCTTGTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALTTEDGEVHYQVKFLDISKMVT*NFPCLR Trigger: TCTGAGACAAGGAAAGTTCCAAGTTACCATCTTTGA...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| 3UTR CAA 72 bp | ACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTaGGATATTCTTTCTTCCCTGAAATCATTATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEDGEVHYQVKF*DILSSLKSLWL Trigger: CAACCATAATGATTTCAGGGAAGAAAGAATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| 3UTR CAA 72 bp | CCTTATAAATCCATTACTAAAATATCTCTACAAGTTTaGGTAAAGGGCCGTTGGACAGAGAACCTTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PYKSITKISLQV*VKGRWTENLIN Trigger: ATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAAACTTGTAGAGATATTTTAGTAATGGATTTATAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS TCA 90 bp | AGACTGCTGAACAAGGTTCGATCTGACACAGGCACTTGTGCTCGTTaGCCAGCTTCTCCAGCGAGAGACACTCAATCACATCCGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLNKVRSDTGTCAR*PASPARDTQSHPLR Trigger: GCGAAGCGGATGTGATTGAGTGTCTCTCGCTGGAGAAGCTGGTCAACGAGCACAAGTGCCTGTGTCAGATCGAACCTTGTTCAGCAGTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
||
| CDS GCA 90 bp | AGACACTCAATCACATCCGCTTCGCCTAAAGCCCCCTCCTTGTCTTaGTTGTTGGCCAGCACCAATATAGGCTTTCCTGATATCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHSITSASPKAPSLS*LLASTNIGFPDILG Trigger: CCCGAGGATATCAGGAAAGCCTATATTGGTGCTGGCCAACAAGCAAGACAAGGAGGGGGCTTTAGGCGAAGCGGATGTGATTGAGTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
||
| CDS TCA 90 bp | GATTACAGCTGCAATGGGTTGGAAAGGATTCGCAAGAACTGGTCCTaGGTCAATCTCAGCCAGACCACTGGTCCCATCAAGTTCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DYSCNGLERIRKNWS*VNLSQTTGPIKFRL Trigger: CAGACGGAACTTGATGGGACCAGTGGTCTGGCTGAGATTGACTCAGGACCAGTTCTTGCGAATCCTTTCCAACCCATTGCAGCTGTAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAAAGGCACTTGTGCTCGTaGACCAGCTTCTCCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FGKGPLDREPYQWHSRAERHLCS*TSFSSE Trigger: CTCGCTGGAGAAGCTGGTCAACGAGCACAAGTGCCT...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS GCA 90 bp | AACAGTGGGAGCTACGTCTTCAGGATGCTCTCCTTGGATTCCCTTTaGTGTGGCTGTTTTACCAGCATTATCAAGGCCGACCATCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSGSYVFRMLSLDSL*CGCFTSIIKADHHK Trigger: CTTGTGATGGTCGGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTCCCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CCA 90 bp | TGGGAGCTACGTCTTCAGGATGCTCTCCTTGGATTCCCTTTGCTGTaGCTGTTTTACCAGCATTATCAAGGCCGACCATCACAAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WELRLQDALLGFPLL*LFYQHYQGRPSQVS Trigger: TGACACTTGTGATGGTCGGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CCA 90 bp | AAGGATTCGCAAGAACTGGTCCTGAGTCAATCTCAGCCAGACCACTaGTCCCATCAAGTTCCGTCTGCTCTCGTTCTCTTTCTTCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KDSQELVLSQSQPDH*SHQVPSALVLFLPL Trigger: TAAGGGAAGAAAGAGAACGAGAGCAGACGGAACTTGATGGGACCAGTGGTCTGGCTGAGATTGACTCAGGACCAGTTCTTGCGAATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | CATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTAATTTTGCATATATGTAACAGGAGGGGGAGGTaGGGGAGGCGTGGGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HPVLWFSYVSHLLILHICNRRGR*GRRGTL Trigger: AAGAGTCCCACGCCTCCCCAACCTCCCCCTCCTGTT...ACATATATGCAAAATTAGCAGGTGGCTCACATAAGAGAACCACAAGACAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CCA 90 bp | TTAGAAAAGCCAACAGTGGGAGCTACGTCTTCAGGATGCTCTCCTTaGATTCCCTTTGCTGTGGCTGTTTTACCAGCATTATCAAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LEKPTVGATSSGCSP*IPFAVAVLPALSRP Trigger: CGGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTCCCACTGTTGGCTTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACACCGCTTGAACAAGTaGCAGCAGTTGGCCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGKGPLDREPYQWHSRAEHRLNK*QQLAIR Trigger: TCTGATGGCCAACTGCTGCAACTTGTTCAAGCGGTG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | CATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTAATTTTGCATATATGTGGCTCCCGCCACCGCTaGAACAAGTTGCAGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HPVLWFSYVSHLLILHICGSRHR*NKLQQL Trigger: CAACTGCTGCAACTTGTTCAAGCGGTGGCGGGAGCC...ACATATATGCAAAATTAGCAGGTGGCTCACATAAGAGAACCACAAGACAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACCTCTCACGTTTCTCTaGTTCCTCAAGAGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FGKGPLDREPYQWHSRAEPLTFL*FLKSSL Trigger: CAGCGAGCTCTTGAGGAACAAGAGAAACGTGAGAGG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACTCCTTGGATTCCCTTaGCTGTGGCTGTTTTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FGKGPLDREPYQWHSRAELLGFP*LWLFYQ Trigger: CTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAACCCTCCTTGTCTTGCTaGTTGGCCAGCACCAATATA | + |
|
Preference number: 5 (lower is better) Translates to: FGKGPLDREPYQWHSRAEPSLSC*LASTNI Trigger: TATATTGGTGCTGGCCAACAAGCAAGACAAGGAGGG...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAAGGGCCGTTGGACAGAGAACCTTATCAATGGCACTCAAGAGCAGAATACAGCTGCAATGGGTaGGAAAGGATTCGCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FGKGPLDREPYQWHSRAEYSCNG*ERIRKN Trigger: GTTCTTGCGAATCCTTTCCAACCCATTGCAGCTGTA...TTCTGCTCTTGAGTGCCATTGATAAGGTTCTCTGTCCAACGGCCCTTTACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | GACCTGACTGATCCGGGTCCAAGGAGCTCAAATATGAACACAATACATTATAAATTCAGGATGCTCTCCTaGGATTCCCTTTGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLTDPGPRSSNMNTIHYKFRMLS*DSLCCG Trigger: GCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAA...TTTATAATGTATTGTGTTCATATTTGAGCTCCTTGGACCCGGATCAGTCAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTAGCCCCCTCCTTGTCTaGCTTGTTGGCCAGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALTTEDGEVHYQVKFLDISPLLV*LVGQHQ Trigger: TTGGTGCTGGCCAACAAGCAAGACAAGGAGGGGGCT...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | CATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGCTAATTTTGCATATATGTGAGCTCGCTGTTCAGTaGTGTCTTTCTGGATGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HPVLWFSYVSHLLILHICELAVQ*CLSGCV Trigger: AACGCATCCAGAAAGACACAACTGAACAGCGAGCTC...ACATATATGCAAAATTAGCAGGTGGCTCACATAAGAGAACCACAAGACAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTGGAAGTCTAGTGACTTaGGGGGTTCCCCAGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ALTTEDGEVHYQVKFLDIGSLVT*GVPQPT Trigger: TGTTGGCTGGGGAACCCCCAAAGTCACTAGACTTCC...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CCA 90 bp | TTTTCCTGCTTCTTTTCATTCTCAATGATTACAGCTGCAATGGGTTaGAAAGGATTCGCAAGAACTGGTCCTGAGTCAATCTCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSCFFSFSMITAAMG*KGFARTGPESISAR Trigger: TCTGGCTGAGATTGACTCAGGACCAGTTCTTGCGAATCCTTTCCAACCCATTGCAGCTGTAATCATTGAGAATGAAAAGAAGCAGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | AATCCAGTTCAGAATGTACATCCTGTCTTGTGGTTCTCTTATGTGAGCCACCTGTTAGCACTTCGGACATaGTCTCCTTTGTTTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NPVQNVHPVLWFSYVSHLLALRT*SPLFLP Trigger: TGGAAGAAACAAAGGAGACAATGTCCGAAGTGCTAA...CAGGTGGCTCACATAAGAGAACCACAAGACAGGATGTACATTCTGAACTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTAACCACAGAAGATGGAGAAGTACATTATCAGGTCAAGTTCTTGGATATTTCCTTGTCTTGCTTGTaGGCCAGCACCAATATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALTTEDGEVHYQVKFLDISLSCL*ASTNIG Trigger: GCCTATATTGGTGCTGGCCAACAAGCAAGACAAGGA...AATATCCAAGAACTTGACCTGATAATGTACTTCTCCATCTTCTGTGGTTAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS GCA 72 bp | CACCACTCGCTCGTCAGGGTTTTGGAGGCAGCAATCTaGCTCACTCTGAGGCGCTGCTTGCTCTGGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HHSLVRVLEAAI*LTLRRCLLWLH Trigger: GTGGAGCCAGAGCAAGCAGCGCCTCAGAGTGAGGCAGATTGCTGCCTCCAAAACCCTGACGAGCGAGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CAA 90 bp | CGACAGTGCCTCCCTGTAACTGTCCACCACTCGCTCGTCAGGGTTTaGGAGGCAGCAATCTGCCTCACTCTGAGGCGCTGCTTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RQCLPVTVHHSLVRV*EAAICLTLRRCLLW Trigger: CCAGAGCAAGCAGCGCCTCAGAGTGAGGCAGATTGCTGCCTCCAAAACCCTGACGAGCGAGTGGTGGACAGTTACAGGGAGGCACTGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS GCA 72 bp | TTACTGTTTTCCCCGGACTCTGACCCTCGCTGGTCCTaGTCATCCTCACTGTCCAGCTGCTGCGACAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLFSPDSDPRWS*SSSLSSCCDSA Trigger: GGCACTGTCGCAGCAGCTGGACAGTGAGGATGAGCAGGACCAGCGAGGGTCAGAGTCCGGGGAAAACAGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CAA 72 bp | CTCCCTGTAACTGTCCACCACTCGCTCGTCAGGGTTTaGGAGGCAGCAATCTGCCTCACTCTGAGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPVTVHHSLVRV*EAAICLTLRRC Trigger: GCAGCGCCTCAGAGTGAGGCAGATTGCTGCCTCCAAAACCCTGACGAGCGAGTGGTGGACAGTTACAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CCA 72 bp | AACAGGAGGGGGAGGTTGGGGAGGCGTGGGACTCTTTaGAGTAGACTCGTCTGTATTGACTGGTTCTACCCG | + |
|
Preference number: 6 (lower is better) Translates to: NRRGRLGRRGTL*SRLVCIDWFYP Trigger: CGGGTAGAACCAGTCAATACAGACGAGTCTACTCCAAAGAGTCCCACGCCTCCCCAACCTCCCCCTCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS TCA 72 bp | TCGTCAGGGTTTTGGAGGCAGCAATCTGCCTCACTCTaGGGCGCTGCTTGCTCTGGCTCCACTTTATGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGFWRQQSASL*GAACSGSTLCS Trigger: AGAACATAAAGTGGAGCCAGAGCAAGCAGCGCCTCAGAGTGAGGCAGATTGCTGCCTCCAAAACCCTGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CAA 72 bp | ACAAGTGTCACCTTTCTGACAGGCTCCCGCCACCGCTaGAACAAGTTGCAGCAGTTGGCCATCAGACTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSVTFLTGSRHR*NKLQQLAIRLN Trigger: GTTCAGTCTGATGGCCAACTGCTGCAACTTGTTCAAGCGGTGGCGGGAGCCTGTCAGAAAGGTGACACTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CAA 72 bp | TCCGCTTCGCCTAAAGCCCCCTCCTTGTCTTGCTTGTaGGCCAGCACCAATATAGGCTTTCCTGATATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SASPKAPSLSCL*ASTNIGFPDIL Trigger: GAGGATATCAGGAAAGCCTATATTGGTGCTGGCCAACAAGCAAGACAAGGAGGGGGCTTTAGGCGAAGCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
||
| CDS CAA 90 bp | TCAATCACATCCGCTTCGCCTAAAGCCCCCTCCTTGTCTTGCTTGTaGGCCAGCACCAATATAGGCTTTCCTGATATCCTCGGGTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SITSASPKAPSLSCL*ASTNIGFPDILGCL Trigger: AAGACACCCGAGGATATCAGGAAAGCCTATATTGGTGCTGGCCAACAAGCAAGACAAGGAGGGGGCTTTAGGCGAAGCGGATGTGATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
||
| CDS TCA 72 bp | TGCAATGGGTTGGAAAGGATTCGCAAGAACTGGTCCTaGGTCAATCTCAGCCAGACCACTGGTCCCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CNGLERIRKNWS*VNLSQTTGPIK Trigger: CTTGATGGGACCAGTGGTCTGGCTGAGATTGACTCAGGACCAGTTCTTGCGAATCCTTTCCAACCCATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CCA 72 bp | CAAGAACTGGTCCTGAGTCAATCTCAGCCAGACCACTaGTCCCATCAAGTTCCGTCTGCTCTCGTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QELVLSQSQPDH*SHQVPSALVLF Trigger: AAAGAGAACGAGAGCAGACGGAACTTGATGGGACCAGTGGTCTGGCTGAGATTGACTCAGGACCAGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS CAA 72 bp | ACATCCGCTTCGCCTAAAGCCCCCTCCTTGTCTTGCTaGTTGGCCAGCACCAATATAGGCTTTCCTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: TSASPKAPSLSC*LASTNIGFPDI Trigger: GATATCAGGAAAGCCTATATTGGTGCTGGCCAACAAGCAAGACAAGGAGGGGGCTTTAGGCGAAGCGGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
||
| CDS CAA 90 bp | CAACAGTGGGAGCTACGTCTTCAGGATGCTCTCCTTGGATTCCCTTaGCTGTGGCTGTTTTACCAGCATTATCAAGGCCGACCATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: QQWELRLQDALLGFP*LWLFYQHYQGRPSQ Trigger: TTGTGATGGTCGGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTCCCACTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
||
| CDS TCA 72 bp | AACAAGGTTCGATCTGACACAGGCACTTGTGCTCGTTaGCCAGCTTCTCCAGCGAGAGACACTCAATCACAT | + |
|
Preference number: 6 (lower is better) Translates to: NKVRSDTGTCAR*PASPARDTQSH Trigger: ATGTGATTGAGTGTCTCTCGCTGGAGAAGCTGGTCAACGAGCACAAGTGCCTGTGTCAGATCGAACCTTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
||
| CDS TCA 72 bp | TTTCCATATCCCAAGACTGCTGAACAAGGTTCGATCTaGCACAGGCACTTGTGCTCGTTGACCAGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPYPKTAEQGSI*HRHLCSLTSFS Trigger: GGAGAAGCTGGTCAACGAGCACAAGTGCCTGTGTCAGATCGAACCTTGTTCAGCAGTCTTGGGATATGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
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| CDS GCA 72 bp | AGCTACGTCTTCAGGATGCTCTCCTTGGATTCCCTTTaGTGTGGCTGTTTTACCAGCATTATCAAGGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: SYVFRMLSLDSL*CGCFTSIIKAD Trigger: GTCGGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS CCA 72 bp | CCAACAGTGGGAGCTACGTCTTCAGGATGCTCTCCTTaGATTCCCTTTGCTGTGGCTGTTTTACCAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: PTVGATSSGCSP*IPFAVAVLPAL Trigger: TAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTCCCACTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS CAA 72 bp | GAGCTACGTCTTCAGGATGCTCTCCTTGGATTCCCTTaGCTGTGGCTGTTTTACCAGCATTATCAAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ELRLQDALLGFP*LWLFYQHYQGR Trigger: TCGGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS CAA 90 bp | TTTAGAAAAGCCAACAGTGGGAGCTACGTCTTCAGGATGCTCTCCTaGGATTCCCTTTGCTGTGGCTGTTTTACCAGCATTATCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: FRKANSGSYVFRMLS*DSLCCGCFTSIIKA Trigger: GGCCTTGATAATGCTGGTAAAACAGCCACAGCAAAGGGAATCCAAGGAGAGCATCCTGAAGACGTAGCTCCCACTGTTGGCTTTTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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| CDS CAA 90 bp | CAGCCCTCTCACGTTTCTCTTGTTCCTCAAGAGCTCGCTGTTCAGTaGTGTCTTTCTGGATGCGTTCACTTAAGGCATCAAAGTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: QPSHVSLVPQELAVQ*CLSGCVHLRHQSPL Trigger: CAAAGGACTTTGATGCCTTAAGTGAACGCATCCAGAAAGACACAACTGAACAGCGAGCTCTTGAGGAACAAGAGAAACGTGAGAGGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
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| CDS CAA 72 bp | CACGTTTCTCTTGTTCCTCAAGAGCTCGCTGTTCAGTaGTGTCTTTCTGGATGCGTTCACTTAAGGCATCAA | + |
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Preference number: 6 (lower is better) Translates to: HVSLVPQELAVQ*CLSGCVHLRHQ Trigger: TTGATGCCTTAAGTGAACGCATCCAGAAAGACACAACTGAACAGCGAGCTCTTGAGGAACAAGAGAAACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089289.6 ENSMUST00000232561.2 |
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| CDS CCA 72 bp | TTCTTTTCATTCTCAATGATTACAGCTGCAATGGGTTaGAAAGGATTCGCAAGAACTGGTCCTGAGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: FFSFSMITAAMG*KGFARTGPESI Trigger: GATTGACTCAGGACCAGTTCTTGCGAATCCTTTCCAACCCATTGCAGCTGTAATCATTGAGAATGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089289.6 |
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