Pregenerated sensors for ARL13A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052549Ensembl transcript IDs: ENSMUST00000064476.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAGTGTGCGTGAACTTGTATGTGGGCTGTAGAGGTGTTATCCAGTaGGAAACAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCC | + |
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Preference number: 1 (lower is better) Translates to: LVCVNLYVGCRGVIQ*ETKTGCFCCFWRCA Trigger: GGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTGTTTCTCACTGGATAACACCTCTACAGCCCACATACAAGTTCACGCACACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR CCA 90 bp | GCATCTCAGTACAAATGGGAAGTCTTTTGCTCTTCTTCGTTCAGGTaGAAAGTCCATGACTTCCCGGGGCTCTTGATGAGTATGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: ASQYKWEVFCSSSFR*KVHDFPGLLMSMDE Trigger: TTCATCCATACTCATCAAGAGCCCCGGGAAGTCATGGACTTTCCACCTGAACGAAGAAGAGCAAAAGACTTCCCATTTGTACTGAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTATCTTCTTCGTTCAGGTaGAAAGTCCATGACTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: YFASPFIPENLKEKRVILSSSFR*KVHDFP Trigger: CGGGAAGTCATGGACTTTCCACCTGAACGAAGAAGA...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTACTACCACACTGGTGTTaGAGAAACAGTGGTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: YFASPFIPENLKEKRVILLPHWC*RNSGSQ Trigger: TTGAGAACCACTGTTTCTGCAACACCAGTGTGGTAG...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR-3UTR CCA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTAGTGAGAAACAAAGACTaGGTGTTTCTGCTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YFASPFIPENLKEKRVILVRNKD*VFLLLL Trigger: CAGAAGCAGCAGAAACACCCAGTCTTTGTTTCTCAC...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTAAAATGGGAAGTCTTTTaGTCTTCTTCGTTCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: YFASPFIPENLKEKRVILKWEVF*SSSFRW Trigger: CCACCTGAACGAAGAAGAGCAAAAGACTTCCCATTT...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR TCA 72 bp | GTGAACTTGTATGTGGGCTGTAGAGGTGTTATCCAGTaGGAAACAAAGACTGGGTGTTTCTGCTGCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VNLYVGCRGVIQ*ETKTGCFCCFW Trigger: CCAGAAGCAGCAGAAACACCCAGTCTTTGTTTCTCACTGGATAACACCTCTACAGCCCACATACAAGTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR CCA 72 bp | TACAAATGGGAAGTCTTTTGCTCTTCTTCGTTCAGGTaGAAAGTCCATGACTTCCCGGGGCTCTTGATGAGT | + |
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Preference number: 3 (lower is better) Translates to: YKWEVFCSSSFR*KVHDFPGLLMS Trigger: ACTCATCAAGAGCCCCGGGAAGTCATGGACTTTCCACCTGAACGAAGAAGAGCAAAAGACTTCCCATTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR GCA 72 bp | GCAGAAACAGTGGTTCTCAAGGATGTGATGTTAGTGTaGGTGAACTTGTATGTGGGCTGTAGAGGTGTTATC | + |
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Preference number: 3 (lower is better) Translates to: AETVVLKDVMLV*VNLYVGCRGVI Trigger: GATAACACCTCTACAGCCCACATACAAGTTCACGCACACTAACATCACATCCTTGAGAACCACTGTTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR GCA 72 bp | TTGTCAGGAGCATCTCAGTACAAATGGGAAGTCTTTTaGTCTTCTTCGTTCAGGTGGAAAGTCCATGACTTC | + |
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Preference number: 3 (lower is better) Translates to: LSGASQYKWEVF*SSSFRWKVHDF Trigger: GAAGTCATGGACTTTCCACCTGAACGAAGAAGAGCAAAAGACTTCCCATTTGTACTGAGATGCTCCTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| 3UTR CAA 72 bp | TCGTTCAGGTGGAAAGTCCATGACTTCCCGGGGCTCTaGATGAGTATGGATGAACTTGCTGGCTACCACACT | + |
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Preference number: 4 (lower is better) Translates to: SFRWKVHDFPGL*MSMDELAGYHT Trigger: AGTGTGGTAGCCAGCAAGTTCATCCATACTCATCAAGAGCCCCGGGAAGTCATGGACTTTCCACCTGAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR TCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTAAATGCGTTTTATGGTTaGACATGGCTCCACGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVNAFYG*TWLHAA Trigger: TGCCGCGTGGAGCCATGTTCAACCATAAAACGCATT...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR TCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTTTCTCCACAGCCTCTaGTGTTCTTGGAGGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWFLHSL*CSWRLR Trigger: TCTCAACCTCCAAGAACATCAGAGGCTGTGGAGAAA...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGCAGCCCTACAACTATTaGCTTTTGCTGCCTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVQPYNY*LLLPLW Trigger: CCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGCTG...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTATGTATTGATCCCCAATaGCAGCTAGTAGCCATCGCA | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVCIDPQ*QLVAIA Trigger: TGCGATGGCTACTAGCTGCCATTGGGGATCAATACA...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTAAGGCTTACTGATGGTTaGAGCTCCAATCTTCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVRLTDG*SSNLPR Trigger: TCTCGGAAGATTGGAGCTCCAACCATCAGTAAGCCT...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR TCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGATGTTCTTGGAGGTTaGGATGCTCATATTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVDVLGG*DAHIGY Trigger: ATACCCAATATGAGCATCTCAACCTCCAAGAACATC...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGCTGCCTCTTTGGAATaGGTTTTATGGTTGAACATG | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVAASLE*VLWLNM Trigger: CATGTTCAACCATAAAACGCATTCCAAAGAGGCAGC...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTAACAACTATTGGCTTTTaGTGCCTCTTTGGAATGCGT | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVTTIGF*CLFGMR Trigger: ACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGT...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGTTCTCAAAATGCCTTTaGTCCACATGCTGTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVFSKCL*STCCLC Trigger: GCATAGACAGCATGTGGAGCAAAGGCATTTTGAGAA...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTACTAGGAATTAGTCTTTaGAAGGCCTCTATGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVLGISL*KASMRR Trigger: TCGTCTCATAGAGGCCTTCCAAAGACTAATTCCTAG...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGATGATCTTCACTTCCTaGATGCGTGCTATGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWMIFTS*MRAMSL Trigger: TAGTGACATAGCACGCATCCAGGAAGTGAAGATCAT...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGACTGACATCAACAGATaGGTCTGGAGTCTTTGTATC | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVTDINR*VWSLCI Trigger: GATACAAAGACTCCAGACCCATCTGTTGATGTCAGT...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTAACTATTGGCTTTTGCTaGCTCTTTGGAATGCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVTIGFC*LFGMRF Trigger: AAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGT...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGTGTCTTTTCTCAAAATaGCTTTGCTCCACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVCLFSK*LCSTCC Trigger: ACAGCATGTGGAGCAAAGGCATTTTGAGAAAAGACA...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTTTGTTTTTCTTCTGTaGTCTTTTGACGAGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWFVFLL*SFDETS Trigger: GCTGGTCTCGTCAAAAGACCACAGAAGAAAAACAAA...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGGGTCTCATTTCTTTGTaGATCTTGCTAGGAATTAGT | + |
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Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWGLISL*ILLGIS Trigger: ACTAATTCCTAGCAAGATGCACAAAGAAATGAGACC...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTCTTGGAGGTTGAGATaGTCATATTGGGTATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWSWRLR*SYWVFV Trigger: AACAAATACCCAATATGAGCATCTCAACCTCCAAGA...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR GCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTGTCTTTTATCAAAATaGTGTCTGTTGCTGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWCLLSK*CLLLCL Trigger: CAGACACAGCAACAGACAGCATTTTGATAAAAGACA...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGATCAACAGATGGGTCTaGAGTCTTTGTATCATAACA | + |
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Preference number: 4 (lower is better) Translates to: KDWVFLLLLEMCPVTIRWINRWV*SLCIIT Trigger: TGTTATGATACAAAGACTCCAGACCCATCTGTTGAT...CCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGTTGAGATGCTCATATTaGGTATTTGTTGTCGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: QRLGVSAASGDVPSYHKVLRCSY*VFVVEY Trigger: ATACTCGACAACAAATACCCAATATGAGCATCTCAA...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTACTGACATATTCTTTTTaGGCCTTATTCGAAAACCAT | + |
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Preference number: 4 (lower is better) Translates to: RLGVSAASGDVPSYHKVVLTYSF*ALFENH Trigger: ATGGTTTTCGAATAAGGCCCAAAAAGAATATGTCAG...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR TCA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTATTATGCGAGTTAAGATaGTCTTCACTTCCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: YFASPFIPENLKEKRVILLCELR*SSLPGC Trigger: GCATCCAGGAAGTGAAGATCATCTTAACTCGCATAA...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CCA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTAAAGCGTTGTTTGTGTTaGTCTCATTTCTTTGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: YFASPFIPENLKEKRVILKRCLC*SHFFVH Trigger: ATGCACAAAGAAATGAGACCAACACAAACAACGCTT...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS GCA 90 bp | GCCATCGCAGCCCTACAACTATTGGCTTTTGCTGCCTCTTTGGAATaGGTTTTATGGTTGAACATGGCTCCACGCGGCACATGGATCTCG | + |
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Preference number: 5 (lower is better) Translates to: AIAALQLLAFAASLE*VLWLNMAPRGTWIS Trigger: CGAGATCCATGTGCCGCGTGGAGCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGCTGCGATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS GCA 90 bp | ATGGCAGCTAGTAGCCATCGCAGCCCTACAACTATTGGCTTTTGCTaGCTCTTTGGAATGCGTTTTATGGTTGAACATGGCTCCACGCGG | + |
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Preference number: 5 (lower is better) Translates to: MAASSHRSPTTIGFC*LFGMRFMVEHGSTR Trigger: CCGCGTGGAGCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGCTGCGATGGCTACTAGCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS GCA 90 bp | CCAATGGCAGCTAGTAGCCATCGCAGCCCTACAACTATTGGCTTTTaGTGCCTCTTTGGAATGCGTTTTATGGTTGAACATGGCTCCACG | + |
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Preference number: 5 (lower is better) Translates to: PMAASSHRSPTTIGF*CLFGMRFMVEHGST Trigger: CGTGGAGCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGCTGCGATGGCTACTAGCTGCCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGCAGCCTCTGATGTTCTaGGAGGTTGAGATGCTCATA | + |
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Preference number: 5 (lower is better) Translates to: QRLGVSAASGDVPSYHKVQPLMF*EVEMLI Trigger: TATGAGCATCTCAACCTCCAAGAACATCAGAGGCTG...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 90 bp | GGTCTGGAGTCTTTGTATCATAACACTGACTACTGCAAGGCTTACTaGTGGTTGGAGCTCCAATCTTCCGAGAACATTCACCTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GLESLYHNTDYCKAY*WLELQSSENIHLPP Trigger: TGGAGGAAGGTGAATGTTCTCGGAAGATTGGAGCTCCAACCATCAGTAAGCCTTGCAGTAGTCAGTGTTATGATACAAAGACTCCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGAAGCGTTGTTTGTGTaGGTCTCATTTCTTTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: QRLGVSAASGDVPSYHKVEALFV*VSFLCA Trigger: TGCACAAAGAAATGAGACCAACACAAACAACGCTTC...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTATTCCCTGAGACCCTTTaGTCAAACATTATGCGAGTT | + |
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Preference number: 5 (lower is better) Translates to: RLGVSAASGDVPSYHKVVFPETL*SNIMRV Trigger: AACTCGCATAATGTTTGACAAAAGGGTCTCAGGGAA...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGTCAAAATGCTGTCTGTaGCTGTGTCTGACTCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: QRLGVSAASGDVPSYHKVSKCCL*LCLTLL Trigger: TAACAGAGTCAGACACAGCAACAGACAGCATTTTGA...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTATTAAGCGCTGTCTaGCCTCAAAATGCTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QRLGVSAASGDVPSYHKVVLSAV*PQNAVF Trigger: AAAGACAGCATTTTGAGGCAAGACAGCGCTTAATAC...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTTGGTCTCATTTCTTaGTGCATCTTGCTAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: QRLGVSAASGDVPSYHKVVGLIS*CILLGI Trigger: AATTCCTAGCAAGATGCACAAAGAAATGAGACCAAC...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGTCTTGTCTTGTTTGTTaGCCAGGATTAAGATGGGTT | + |
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Preference number: 5 (lower is better) Translates to: QRLGVSAASGDVPSYHKVSCLVC*PGLRWV Trigger: AACCCATCTTAATCCTGGCAAACAAACAAGACAAGA...CACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | AGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAGGTGGTACATATTGGGTATTTGTaGTCGAGTATACAGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: RLGVSAASGDVPSYHKVVHIGYL*SSIQLT Trigger: AGTGAGCTGTATACTCGACAACAAATACCCAATATG...TACCACCTTATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | AGAAACAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAAAAAGAGCGTTCTTCTaGTCTTGTTTGTTTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RNKDWVFLLLLEMCPVTIKRAFF*SCLFAR Trigger: CCTGGCAAACAAACAAGACAAGAAGAACGCTCTTTT...TATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTGTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | AGAAACAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATAGCTCATATTGGGTATTaGTTGTCGAGTATACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RNKDWVFLLLLEMCPVTIAHIGY*LSSIQL Trigger: GAGCTGTATACTCGACAACAAATACCCAATATGAGC...TATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 90 bp | ACCCTTTTGTCAAACATTATGCGAGTTAAGATGATCTTCACTTCCTaGATGCGTGCTATGTCACTAGAATCCACCACGAAAATAAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TLLSNIMRVKMIFTS*MRAMSLESTTKISP Trigger: TGGGCTTATTTTCGTGGTGGATTCTAGTGACATAGCACGCATCCAGGAAGTGAAGATCATCTTAACTCGCATAATGTTTGACAAAAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTATTCTTCTGTGGTCTTTaGACGAGACCAGCAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: YFASPFIPENLKEKRVILFFCGL*TRPAGS Trigger: ACTGCCTGCTGGTCTCGTCAAAAGACCACAGAAGAA...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | AGAAACAAAGACTGGGTGTTTCTGCTGCTTCTGGAGATGTGCCCAGTTACCATATTCTTCTTGTCTTGTTaGTTTGCCAGGATTAAGATG | + |
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Preference number: 5 (lower is better) Translates to: RNKDWVFLLLLEMCPVTIFFLSC*FARIKM Trigger: CATCTTAATCCTGGCAAACAAACAAGACAAGAAGAA...TATGGTAACTGGGCACATCTCCAGAAGCAGCAGAAACACCCAGTCTTTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 90 bp | GCAAAAGAGCGTTCTTCTTGTCTTGTTTGTTTGCCAGGATTAAGATaGGTTTCCCTGAGACCCTTTTGTCAAACATTATGCGAGTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: AKERSSCLVCLPGLR*VSLRPFCQTLCELR Trigger: TCTTAACTCGCATAATGTTTGACAAAAGGGTCTCAGGGAAACCCATCTTAATCCTGGCAAACAAACAAGACAAGAAGAACGCTCTTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 90 bp | TTTGGGCTTATGAGCTTTGAAAAGACTGACATCAACAGATGGGTCTaGAGTCTTTGTATCATAACACTGACTACTGCAAGGCTTACTGAT | + |
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Preference number: 5 (lower is better) Translates to: FGLMSFEKTDINRWV*SLCIITLTTARLTD Trigger: ATCAGTAAGCCTTGCAGTAGTCAGTGTTATGATACAAAGACTCCAGACCCATCTGTTGATGTCAGTCTTTTCAAAGCTCATAAGCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 90 bp | TCTCTTTTTGGGCTTATGAGCTTTGAAAAGACTGACATCAACAGATaGGTCTGGAGTCTTTGTATCATAACACTGACTACTGCAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLFGLMSFEKTDINR*VWSLCIITLTTARL Trigger: AAGCCTTGCAGTAGTCAGTGTTATGATACAAAGACTCCAGACCCATCTGTTGATGTCAGTCTTTTCAAAGCTCATAAGCCCAAAAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 90 bp | TGGATCTCGTCTCATTCACGAGCCTTTCCAGAAGTAGATATTCAATaGTATCACAAGGCAAAAGAGCGTTCTTCTTGTCTTGTTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WISSHSRAFPEVDIQ*YHKAKERSSCLVCL Trigger: CAAACAAACAAGACAAGAAGAACGCTCTTTTGCCTTGTGATATCATTGAATATCTACTTCTGGAAAGGCTCGTGAATGAGACGAGATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 90 bp | AACATTTCTTCAGTGTCCCAGGTTTCTATTCTCTTTTTGGGCTTATaGGCTTTGAAAAGACTGACATCAACAGATGGGTCTGGAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NISSVSQVSILFLGL*ALKRLTSTDGSGVF Trigger: AAAGACTCCAGACCCATCTGTTGATGTCAGTCTTTTCAAAGCTCATAAGCCCAAAAAGAGAATAGAAACCTGGGACACTGAAGAAATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTAGCTTTTGCTGCCTCTTaGGAATGCGTTTTATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFASPFIPENLKEKRVILAFAAS*ECVLWL Trigger: CAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGC...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTAATTTCTTTGTGCATCTaGCTAGGAATTAGTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YFASPFIPENLKEKRVILISLCI*LGISLW Trigger: CCAAAGACTAATTCCTAGCAAGATGCACAAAGAAAT...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS-3UTR CAA 90 bp | TATTTTGCCAGTCCCTTTATACCTGAGAACCTTAAAGAGAAACGTGTGATTCTATCTATGCTCCATGTGTaGTCTTTTATCAAAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFASPFIPENLKEKRVILSMLHV*SFIKML Trigger: CAGCATTTTGATAAAAGACAACACATGGAGCATAGA...TAGAATCACACGTTTCTCTTTAAGGTTCTCAGGTATAAAGGGACTGGCAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 72 bp | TGGCTTTTGCTGCCTCTTTGGAATGCGTTTTATGGTTaGACATGGCTCCACGCGGCACATGGATCTCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLLLPLWNAFYG*TWLHAAHGSRL Trigger: GAGACGAGATCCATGTGCCGCGTGGAGCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS GCA 72 bp | GCCCTACAACTATTGGCTTTTGCTGCCTCTTTGGAATaGGTTTTATGGTTGAACATGGCTCCACGCGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ALQLLAFAASLE*VLWLNMAPRGT Trigger: TGTGCCGCGTGGAGCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | CTATTGGCTTTTGCTGCCTCTTTGGAATGCGTTTTATaGTTGAACATGGCTCCACGCGGCACATGGATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLAFAASLECVL*LNMAPRGTWIS Trigger: CGAGATCCATGTGCCGCGTGGAGCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | GTTGTCGAGTATACAGCTCACTGTATTGATCCCCAATaGCAGCTAGTAGCCATCGCAGCCCTACAACTATTG | + |
|
Preference number: 6 (lower is better) Translates to: VVEYTAHCIDPQ*QLVAIAALQLL Trigger: CAATAGTTGTAGGGCTGCGATGGCTACTAGCTGCCATTGGGGATCAATACAGTGAGCTGTATACTCGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS GCA 72 bp | AGTAGCCATCGCAGCCCTACAACTATTGGCTTTTGCTaGCTCTTTGGAATGCGTTTTATGGTTGAACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSHRSPTTIGFC*LFGMRFMVEHG Trigger: GCCATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGCTGCGATGGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS GCA 72 bp | GCTAGTAGCCATCGCAGCCCTACAACTATTGGCTTTTaGTGCCTCTTTGGAATGCGTTTTATGGTTGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: ASSHRSPTTIGF*CLFGMRFMVEH Trigger: ATGTTCAACCATAAAACGCATTCCAAAGAGGCAGCAAAAGCCAATAGTTGTAGGGCTGCGATGGCTACTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | ATCATAACACTGACTACTGCAAGGCTTACTGATGGTTaGAGCTCCAATCTTCCGAGAACATTCACCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IITLTTARLTDG*SSNLPRTFTFL Trigger: GAGGAAGGTGAATGTTCTCGGAAGATTGGAGCTCCAACCATCAGTAAGCCTTGCAGTAGTCAGTGTTATGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 72 bp | GTAAGCTGTCTGATAAGCATCTTTCTCCACAGCCTCTaGTGTTCTTGGAGGTTGAGATGCTCATATTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSCLISIFLHSL*CSWRLRCSYWV Trigger: TACCCAATATGAGCATCTCAACCTCCAAGAACATCAGAGGCTGTGGAGAAAGATGCTTATCAGACAGCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | GGTAAGCTGTCTGATAAGCATCTTTCTCCACAGCCTCTGATGTTCTaGGAGGTTGAGATGCTCATATTGGGTATTTGTTGTCGAGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: GKLSDKHLSPQPLMF*EVEMLILGICCRVY Trigger: GTATACTCGACAACAAATACCCAATATGAGCATCTCAACCTCCAAGAACATCAGAGGCTGTGGAGAAAGATGCTTATCAGACAGCTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 72 bp | GCATCTTTCTCCACAGCCTCTGATGTTCTTGGAGGTTaGGATGCTCATATTGGGTATTTGTTGTCGAGTATA | + |
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Preference number: 6 (lower is better) Translates to: ASFSTASDVLGG*DAHIGYLLSSI Trigger: TATACTCGACAACAAATACCCAATATGAGCATCTCAACCTCCAAGAACATCAGAGGCTGTGGAGAAAGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | CTCATTTCTTTGTGCATCTTGCTAGGAATTAGTCTTTaGAAGGCCTCTATGAGACGACTTTTGCCAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LISLCILLGISL*KASMRRLLPEL Trigger: CAACTCTGGCAAAAGTCGTCTCATAGAGGCCTTCCAAAGACTAATTCCTAGCAAGATGCACAAAGAAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 72 bp | ATATCACAAGGCAAAAGAGCGTTCTTCTTGTCTTGTTaGTTTGCCAGGATTAAGATGGGTTTCCCTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: ISQGKRAFFLSC*FARIKMGFPET Trigger: GGTCTCAGGGAAACCCATCTTAATCCTGGCAAACAAACAAGACAAGAAGAACGCTCTTTTGCCTTGTGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS TCA 72 bp | TCAGTGTCCCAGGTTTCTATTCTCTTTTTGGGCTTATaGGCTTTGAAAAGACTGACATCAACAGATGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSQVSILFLGL*ALKRLTSTDGS Trigger: AGACCCATCTGTTGATGTCAGTCTTTTCAAAGCTCATAAGCCCAAAAAGAGAATAGAAACCTGGGACACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | TCAAACATTATGCGAGTTAAGATGATCTTCACTTCCTaGATGCGTGCTATGTCACTAGAATCCACCACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SNIMRVKMIFTS*MRAMSLESTTK Trigger: TTTCGTGGTGGATTCTAGTGACATAGCACGCATCCAGGAAGTGAAGATCATCTTAACTCGCATAATGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | CGTTCTTCTTGTCTTGTTTGTTTGCCAGGATTAAGATaGGTTTCCCTGAGACCCTTTTGTCAAACATTATGC | + |
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Preference number: 6 (lower is better) Translates to: RSSCLVCLPGLR*VSLRPFCQTLC Trigger: GCATAATGTTTGACAAAAGGGTCTCAGGGAAACCCATCTTAATCCTGGCAAACAAACAAGACAAGAAGAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CCA 72 bp | ATGAGCTTTGAAAAGACTGACATCAACAGATGGGTCTaGAGTCTTTGTATCATAACACTGACTACTGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MSFEKTDINRWV*SLCIITLTTAR Trigger: CCTTGCAGTAGTCAGTGTTATGATACAAAGACTCCAGACCCATCTGTTGATGTCAGTCTTTTCAAAGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 72 bp | CTTTGGAAGGCCTCTATGAGACGACTTTTGCCAGAGTaGTCCAAACCAATAACAATGATAGTCACATTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWKASMRRLLPE*SKPITMIVTFL Trigger: AAGGAATGTGACTATCATTGTTATTGGTTTGGACAACTCTGGCAAAAGTCGTCTCATAGAGGCCTTCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 72 bp | GGAATTAGTCTTTGGAAGGCCTCTATGAGACGACTTTaGCCAGAGTTGTCCAAACCAATAACAATGATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GISLWKASMRRL*PELSKPITMIV Trigger: GACTATCATTGTTATTGGTTTGGACAACTCTGGCAAAAGTCGTCTCATAGAGGCCTTCCAAAGACTAATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 72 bp | AGCGTTGTTTGTGTTGGTCTCATTTCTTTGTGCATCTaGCTAGGAATTAGTCTTTGGAAGGCCTCTATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVVCVGLISLCI*LGISLWKASMR Trigger: TCTCATAGAGGCCTTCCAAAGACTAATTCCTAGCAAGATGCACAAAGAAATGAGACCAACACAAACAACGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | TCTAGTAGAAGCGTTGTTTGTGTTGGTCTCATTTCTTTGTGCATCTaGCTAGGAATTAGTCTTTGGAAGGCCTCTATGAGACGACTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRSVVCVGLISLCI*LGISLWKASMRRLL Trigger: CAAAAGTCGTCTCATAGAGGCCTTCCAAAGACTAATTCCTAGCAAGATGCACAAAGAAATGAGACCAACACAAACAACGCTTCTACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | TCTTGTTTGTTTGCCAGGATTAAGATGGGTTTCCCTGAGACCCTTTaGTCAAACATTATGCGAGTTAAGATGATCTTCACTTCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SCLFARIKMGFPETL*SNIMRVKMIFTSWM Trigger: CATCCAGGAAGTGAAGATCATCTTAACTCGCATAATGTTTGACAAAAGGGTCTCAGGGAAACCCATCTTAATCCTGGCAAACAAACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | TGCTGTCTATGCTCCATGTGTTGTCTTTTATCAAAATGCTGTCTGTaGCTGTGTCTGACTCTGTTAGGTAAGCTGTCTGATAAGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: CCLCSMCCLLSKCCL*LCLTLLGKLSDKHL Trigger: AAGATGCTTATCAGACAGCTTACCTAACAGAGTCAGACACAGCAACAGACAGCATTTTGATAAAAGACAACACATGGAGCATAGACAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | ATCTTGCTAGGAATTAGTCTTTGGAAGGCCTCTATGAGACGACTTTaGCCAGAGTTGTCCAAACCAATAACAATGATAGTCACATTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILLGISLWKASMRRL*PELSKPITMIVTFL Trigger: AAGGAATGTGACTATCATTGTTATTGGTTTGGACAACTCTGGCAAAAGTCGTCTCATAGAGGCCTTCCAAAGACTAATTCCTAGCAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | AGAAGTAGATATTCAATGATATCACAAGGCAAAAGAGCGTTCTTCTaGTCTTGTTTGTTTGCCAGGATTAAGATGGGTTTCCCTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSRYSMISQGKRAFF*SCLFARIKMGFPET Trigger: GGTCTCAGGGAAACCCATCTTAATCCTGGCAAACAAACAAGACAAGAAGAACGCTCTTTTGCCTTGTGATATCATTGAATATCTACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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| CDS CAA 90 bp | TCCTCCATGATGACATCTAGAGCAAATGTTACTGACATATTCTTTTaGGGCCTTATTCGAAAACCATCTTTCTGTAGAATTGGCTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSMMTSRANVTDIFF*GLIRKPSFCRIGFR Trigger: CCTAAAGCCAATTCTACAGAAAGATGGTTTTCGAATAAGGCCCAAAAAGAATATGTCAGTAACATTTGCTCTAGATGTCATCATGGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064476.5 |
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