Pregenerated sensors for ARL11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043157Ensembl transcript IDs: ENSMUST00000055159.8, ENSMUST00000224727.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGACCTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGTaGCAGTGGCTCCTGCCCAGAGCCCAGCAGGAAGAGTTGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: QTCPSLLSAQLSVQK*QWLLPRAQQEELLL Trigger: CAGGAGCAACTCTTCCTGCTGGGCTCTGGGCAGGAGCCACTGTCACTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CCA 90 bp | GAGTTGGAAAGCAGGGGGAATTCTGGGAGGATTCCTGCAGCATCCTaGGAGCAGACCTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: ELESRGNSGRIPAAS*EQTCPSLLSAQLSV Trigger: TACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGATGCTGCAGGAATCCTCCCAGAATTCCCCCTGCTTTCCAACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CCA 90 bp | CACTCAGATGACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTaGAACCTCTTTTCATTTGTGAACTTGGTCAATTACTATGTCACC | + |
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Preference number: 1 (lower is better) Translates to: HSDDSDRPGDTQMQF*NLFSFVNLVNYYVT Trigger: GGTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTCATCTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGCAGCATCCTGGGAGCAGACCTGCCCCTCACTGCTGTCAGCCCAGCTACTCACGGGGTCCGCCTaGCCCTGCTCCCTGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: IPAASWEQTCPSLLSAQLLTGSA*PCSLSC Trigger: GCAGGACAGGGAGCAGGGTCAGGCGGACCCCGTGAG...TAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGATGCTGCAGGAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGTGACAGTGGCTCCTCTCACGGGGTCCGCCTaGCCCTGCTCCCTGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LPLTAVSPAKCTKVTVAPLTGSA*PCSLSC Trigger: GCAGGACAGGGAGCAGGGTCAGGCGGACCCCGTGAG...AGGAGCCACTGTCACTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCATCCTGGGAGCAGACCTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACCCTGCTCCCTGTCCTaGTCCAGCCTGGAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AASWEQTCPSLLSAQLSVPCSLS*SSLESE Trigger: CTCTGACTCCAGGCTGGAGCAGGACAGGGAGCAGGG...TACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGATGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCATCCTGGGAGCAGACCTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTATGTCCTGCTCCAGCCTaGAGTCAGAGGTTACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: AASWEQTCPSLLSAQLSVCPAPA*SQRLLH Trigger: ATGCAGTAACCTCTGACTCCAGGCTGGAGCAGGACA...TACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGATGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGCCCTGCTCCCTGTCCTaGTCCAGCCTGGAGTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLPCSLS*SSLESE Trigger: CTCTGACTCCAGGCTGGAGCAGGACAGGGAGCAGGG...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCCAGCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTTCTCGTGTGGTAAACTaGGCTTCCTTTTCTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: QSPAGRVAPDDSDRPNDTSRVVN*ASFSQG Trigger: ACCTTGAGAAAAGGAAGCTCAGTTTACCACACGAGA...AGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGCTGGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTCAGATGACATCTCGTGTGGTAAACTaGGCTTCCTTTTCTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: AGRVAPDDSDRPNDTQMTSRVVN*ASFSQG Trigger: ACCTTGAGAAAAGGAAGCTCAGTTTACCACACGAGA...TGTCATCTGAGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGTTACCCGGGGTATTGTaGGAATTTTTATATTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLLPGVL*EFLYSL Trigger: GAGGGAATATAAAAATTCTCACAATACCCCGGGTAA...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTTTACCCGGGGTATTGTaGGAATTTTTATATTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: DSDRPGDTQMQFWNLFSFLPGVL*EFLYSL Trigger: GAGGGAATATAAAAATTCTCACAATACCCCGGGTAA...AAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGACTGAGAATAAGTCCTaGGAAGAAAATATACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLTENKS*EENILS Trigger: GGACAGTATATTTTCTTCTCAGGACTTATTCTCAGT...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR GCA 72 bp | TCTGGGAGGATTCCTGCAGCATCCTGGGAGCAGACCTaGCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: SGRIPAASWEQT*PSLLSAQLSVQ Trigger: TTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGATGCTGCAGGAATCCTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGGAGCAGACCTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGGCCCAGCAGGAAGAGTaGCTCCTGATGACAGTGATA | + |
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Preference number: 3 (lower is better) Translates to: SWEQTCPSLLSAQLSVQKAQQEE*LLMTVI Trigger: TATCACTGTCATCAGGAGCAACTCTTCCTGCTGGGC...CTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CCA 72 bp | GAAAAGTTAGTTGGAGTTGGAAAGCAGGGGGAATTCTaGGAGGATTCCTGCAGCATCCTGGGAGCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: EKLVGVGKQGEF*EDSCSILGADL Trigger: CAGGTCTGCTCCCAGGATGCTGCAGGAATCCTCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCCCAGCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTTTACTTGAAGAACAGTaGATTTTCAGCATAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: QSPAGRVAPDDSDRPNDTLLEEQ*IFSITA Trigger: GGCAGTTATGCTGAAAATCAACTGTTCTTCAAGTAA...AGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGCTGGGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CCA 72 bp | ACATATGATGTAGGGCAGAGAAAAGTTAGTTGGAGTTaGAAAGCAGGGGGAATTCTGGGAGGATTCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TYDVGQRKVSWS*KAGGILGGFLQ Trigger: CTGCAGGAATCCTCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTCTCTGCCCTACATCATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTCAGATGACACACTCAGATGCAGTTTaGGAACCTCTTTTCATTTGT | + |
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Preference number: 3 (lower is better) Translates to: AGRVAPDDSDRPNDTQMTHSDAV*EPLFIC Trigger: ACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTG...TGTCATCTGAGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGACCAACTTTGTTACATaGGCACTTTGTAGTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLTNFVT*ALCSGL Trigger: CAGCCCACTACAAAGTGCCAATGTAACAAAGTTGGT...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CAA 90 bp | GACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTACCAACTTTGTTACATaGGCACTTTGTAGTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DSDRPGDTQMQFWNLFSFTNFVT*ALCSGL Trigger: CAGCCCACTACAAAGTGCCAATGTAACAAAGTTGGT...AAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CCA 72 bp | ACTTGGTCAATTACTATGTCACCAACTTTGTTACATTaGCACTTTGTAGTGGGCTGTTACCCGGGGTATTGT | + |
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Preference number: 3 (lower is better) Translates to: TWSITMSPTLLH*HFVVGCYPGYC Trigger: ACAATACCCCGGGTAACAGCCCACTACAAAGTGCCAATGTAACAAAGTTGGTGACATAGTAATTGACCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CCA 72 bp | TTTACAACATATGATGTAGGGCAGAGAAAAGTTAGTTaGAGTTGGAAAGCAGGGGGAATTCTGGGAGGATTC | + |
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Preference number: 3 (lower is better) Translates to: FTTYDVGQRKVS*SWKAGGILGGF Trigger: GAATCCTCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTCTCTGCCCTACATCATATGTTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGTTACTTGAAGAACAGTaGATTTTCAGCATAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLLLEEQ*IFSITA Trigger: GGCAGTTATGCTGAAAATCAACTGTTCTTCAAGTAA...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR TCA 72 bp | TTGATTTTCAGCATAACTGCCACTGAGAATAAGTCCTaGGAAGAAAATATACTGTCCAAGAGAATTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: LIFSITATENKS*EENILSKRIVV Trigger: AACCACAATTCTCTTGGACAGTATATTTTCTTCTCAGGACTTATTCTCAGTGGCAGTTATGCTGAAAATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR TCA 72 bp | ACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTaGACTTGGTCAATTACTATGTCACCAACTTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: TLRCSFGTSFHL*TWSITMSPTLL Trigger: TAACAAAGTTGGTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | TCCTGGGAGCAGACCTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGCGGGACTTCAGCAAATaGAGCAGGCTCTGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SWEQTCPSLLSAQLSVQKRDFSK*SRLCRA Trigger: AGCCCTGCAGAGCCTGCTGCATTTGCTGAAGTCCCG...CTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAGGTCTGCTCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGTGACAGTGGCTCCTGTCCCAGAGAGTCAGTaGCACATGTCCAGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPLTAVSPAKCTKVTVAPVPESQ*HMSRSL Trigger: GAGGCTCCTGGACATGTGTCACTGACTCTCTGGGAC...AGGAGCCACTGTCACTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCCCAGCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTAAATGCAGCAGGCTCTaGAGGGCTTCCTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QSPAGRVAPDDSDRPNDTKCSRL*RASCSP Trigger: GGGGCTGCAGGAAGCCCTGCAGAGCCTGCTGCATTT...AGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGCTGGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGTGACAGTGGCTCCTCGGGACTTCAGCAAATaGAGCAGGCTCTGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPLTAVSPAKCTKVTVAPRDFSK*SRLCRA Trigger: AGCCCTGCAGAGCCTGCTGCATTTGCTGAAGTCCCG...AGGAGCCACTGTCACTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCCTCACTGCTGTCAGCCCAGCTAAGTGTACAAAAGTGACAGTGGCTCCTACACAAGGAGGTCGATaGCTTCCAGGTAGTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPLTAVSPAKCTKVTVAPTQGGR*LPGSPS Trigger: GGAAGGACTACCTGGAAGGCATCGACCTCCTTGTGT...AGGAGCCACTGTCACTTTTGTACACTTAGCTGGGCTGACAGCAGTGAGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CCA 90 bp | GCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTCAGATGACAGGACGCCGGCCATGTTaGGGTCTTCCAGGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AGRVAPDDSDRPNDTQMTGRRPC*GLPGLP Trigger: AGGAAGTCCTGGAAGACCCCAACATGGCCGGCGTCC...TGTCATCTGAGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR TCA 90 bp | GCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTCAGATGACACTTCCAGGACTTCCTTaGGCTCAGCCACTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGRVAPDDSDRPNDTQMTLPGLP*AQPLPQ Trigger: CTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAG...TGTCATCTGAGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | GCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTCAGATGACAGCACCAGGAGCCTCCTaGTTGTTGGCCAGTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: AGRVAPDDSDRPNDTQMTAPGAS*LLASTK Trigger: CTTGGTACTGGCCAACAAGCAGGAGGCTCCTGGTGC...TGTCATCTGAGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR TCA 90 bp | GATGTAGGGCAGAGAAAAGTTAGTTGGAGTTGGAAAGCAGGGGGAATTCTGGGAGTCCCAGAGAGTCAGTaGCACATGTCCAGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DVGQRKVSWSWKAGGILGVPESQ*HMSRSL Trigger: GAGGCTCCTGGACATGTGTCACTGACTCTCTGGGAC...TCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTCTCTGCCCTACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR TCA 90 bp | GATGTAGGGCAGAGAAAAGTTAGTTGGAGTTGGAAAGCAGGGGGAATTCTGGGACTTCCAGGACTTCCTTaGGCTCAGCCACTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DVGQRKVSWSWKAGGILGLPGLP*AQPLPQ Trigger: CTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAG...TCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTCTCTGCCCTACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | GCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTCAGATGACAACACAAGGAGGTCGATaGCTTCCAGGTAGTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGRVAPDDSDRPNDTQMTTQGGR*LPGSPS Trigger: GGAAGGACTACCTGGAAGGCATCGACCTCCTTGTGT...TGTCATCTGAGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | GACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTCTTGAGCTCAGCCACTaGCTCAGGCAAGCGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DSDRPGDTQMQFWNLFSFLELSH*LRQAGF Trigger: GAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAG...AAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGCTTGAGCTCAGCCACTaGCTCAGGCAAGCGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLLELSH*LRQAGF Trigger: GAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAG...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CCA 90 bp | TCAGATGACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTCAGGTAGCTCTGAGCTaGGTCTGTCCCCCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: SDDSDRPGDTQMQFWNLFQVALS*VCPPMS Trigger: GGACATTGGGGGACAGACCCAGCTCAGAGCTACCTG...AAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTCATCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR TCA 90 bp | CAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGGTCAATTACTATGTCGCAGCCCCTGTCCTGTaGGAGCGCTGCAAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: QMQFWNLFSFVNLVNYYVAAPVL*ERCKPA Trigger: TGCGGGCTTGCAGCGCTCTCACAGGACAGGGGCTGC...GACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGCAGGTAGCTCTGAGCTaGGTCTGTCCCCCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLQVALS*VCPPMS Trigger: GGACATTGGGGGACAGACCCAGCTCAGAGCTACCTG...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | TCAGATGACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTACAGAATTGTGGTCTTaGCAGCAGAGTCGAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SDDSDRPGDTQMQFWNLFTELWS*QQSRGP Trigger: TGGGCCTCGACTCTGCTGGCAAGACCACAATTCTGT...AAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTCATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGACAGAATTGTGGTCTTaGCAGCAGAGTCGAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLTELWS*QQSRGP Trigger: TGGGCCTCGACTCTGCTGGCAAGACCACAATTCTGT...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | GACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTAGCGGGCTTCATCTGTaGTGTCCAGCACGTACACAA | + |
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Preference number: 4 (lower is better) Translates to: DSDRPGDTQMQFWNLFSFSGLHL*CPARTQ Trigger: TTGTGTACGTGCTGGACAGCACAGATGAAGCCCGCT...AAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | GATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGGTCAATTACTATGTCACAAATGCAGCAGGCTCTaGAGGGCTTCCTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: DAVLEPLFICELGQLLCHKCSRL*RASCSP Trigger: GGGGCTGCAGGAAGCCCTGCAGAGCCTGCTGCATTT...GTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CCA 90 bp | GATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGGTCAATTACTATGTCACGGACGCCGGCCATGTTaGGGTCTTCCAGGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DAVLEPLFICELGQLLCHGRRPC*GLPGLP Trigger: AGGAAGTCCTGGAAGACCCCAACATGGCCGGCGTCC...GTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR GCA 90 bp | GATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGGTCAATTACTATGTCACGCACCAGGAGCCTCCTaGTTGTTGGCCAGTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: DAVLEPLFICELGQLLCHAPGAS*LLASTK Trigger: CTTGGTACTGGCCAACAAGCAGGAGGCTCCTGGTGC...GTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CAA 72 bp | AACTTGGTCAATTACTATGTCACCAACTTTGTTACATaGGCACTTTGTAGTGGGCTGTTACCCGGGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: NLVNYYVTNFVT*ALCSGLLPGVL Trigger: CAATACCCCGGGTAACAGCCCACTACAAAGTGCCAATGTAACAAAGTTGGTGACATAGTAATTGACCAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| 3UTR CAA 72 bp | CAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTaGGTCAATTACTATGTCACCAACTTTGTTACATTG | + |
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Preference number: 4 (lower is better) Translates to: QMQFWNLFSFVN*VNYYVTNFVTL Trigger: CAATGTAACAAAGTTGGTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS TCA 90 bp | CCAAGAAGGGGACGCCGGCCATGTTGGGGTCTTCCAGGACTTCCTTaGGCTCAGCCACTGCCTCAGGCAAGCGGGCTTCATCTGTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PRRGRRPCWGLPGLP*AQPLPQASGLHLCC Trigger: ACAGCACAGATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAGACCCCAACATGGCCGGCGTCCCCTTCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS GCA 90 bp | GCCGGCCATGTTGGGGTCTTCCAGGACTTCCTTGAGCTCAGCCACTaGCTCAGGCAAGCGGGCTTCATCTGTGCTGTCCAGCACGTACAC | + |
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Preference number: 5 (lower is better) Translates to: AGHVGVFQDFLELSH*LRQAGFICAVQHVH Trigger: GTGTACGTGCTGGACAGCACAGATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAGACCCCAACATGGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS GCA 90 bp | AGCCCCTGTCCTGTGAGAGCGCTGCAAGCCCGCAGCTCCCAGCAATaGTTTTGGAACCCTTCCAGGCCCAGCCTGTTTCTGATTTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: SPCPVRALQARSSQQ*FWNPSRPSLFLISS Trigger: GCTTGAAATCAGAAACAGGCTGGGCCTGGAAGGGTTCCAAAAGCATTGCTGGGAGCTGCGGGCTTGCAGCGCTCTCACAGGACAGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS CCA 90 bp | TGTCCTGTGAGAGCGCTGCAAGCCCGCAGCTCCCAGCAATGCTTTTaGAACCCTTCCAGGCCCAGCCTGTTTCTGATTTCAAGCAACGGC | + |
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Preference number: 5 (lower is better) Translates to: CPVRALQARSSQQCF*NPSRPSLFLISSNG Trigger: GCCGTTGCTTGAAATCAGAAACAGGCTGGGCCTGGAAGGGTTCCAAAAGCATTGCTGGGAGCTGCGGGCTTGCAGCGCTCTCACAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS TCA 90 bp | GCTCCCAGCAATGCTTTTGGAACCCTTCCAGGCCCAGCCTGTTTCTaGTTTCAAGCAACGGCAGAGCACCAGGAGCCTCCTGCTTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: APSNAFGTLPGPACF*FQATAEHQEPPACW Trigger: CCAACAAGCAGGAGGCTCCTGGTGCTCTGCCGTTGCTTGAAATCAGAAACAGGCTGGGCCTGGAAGGGTTCCAAAAGCATTGCTGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCCCAGCAGGAAGAGTTGCTCCTGATGACAGTGATAGGCCCAATGACACTTACAGAATTGTGGTCTaGCCAGCAGAGTCGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QSPAGRVAPDDSDRPNDTYRIVV*PAESRP Trigger: GGGCCTCGACTCTGCTGGCAAGACCACAATTCTGTA...AGTGTCATTGGGCCTATCACTGTCATCAGGAGCAACTCTTCCTGCTGGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS TCA 90 bp | GGTAGCTCTGAGCTGGGTCTGTCCCCCAATGTCCCAGAGAGTCAGTaGCACATGTCCAGGAGCCTCAAGAGGCTCTACATTAAAACCAAC | + |
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Preference number: 5 (lower is better) Translates to: GSSELGLSPNVPESQ*HMSRSLKRLYIKTN Trigger: GTTGGTTTTAATGTAGAGCCTCTTGAGGCTCCTGGACATGTGTCACTGACTCTCTGGGACATTGGGGGACAGACCCAGCTCAGAGCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | GATGTAGGGCAGAGAAAAGTTAGTTGGAGTTGGAAAGCAGGGGGAATTCTGGGAGGAGCCTCCTGCTTGTaGGCCAGTACCAAGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: DVGQRKVSWSWKAGGILGGASCL*ASTKKG Trigger: CCCCTTCTTGGTACTGGCCAACAAGCAGGAGGCTCC...TCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTCTCTGCCCTACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGGGAGCCTCCTGCTTGTaGGCCAGTACCAAGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLGASCL*ASTKKG Trigger: CCCCTTCTTGGTACTGGCCAACAAGCAGGAGGCTCC...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | TCAGATGACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTCTCCCAGCAATGCTTTaGGAACCCTTCCAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SDDSDRPGDTQMQFWNLFLPAML*EPFQAQ Trigger: CTGGGCCTGGAAGGGTTCCAAAAGCATTGCTGGGAG...AAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTCATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | GACAGTGATAGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTCTCCCAGCAATGCTTTaGGAACCCTTCCAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: DSDRPGDTQMQFWNLFSFLPAML*EPFQAQ Trigger: CTGGGCCTGGAAGGGTTCCAAAAGCATTGCTGGGAG...AAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCTATCACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | AGGCCAGGTGACACTCAGATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGTACAGAATTGTGGTCTaGCCAGCAGAGTCGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RPGDTQMQFWNLFSFVNLYRIVV*PAESRP Trigger: GGGCCTCGACTCTGCTGGCAAGACCACAATTCTGTA...CAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATCTGAGTGTCACCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS-3UTR CAA 90 bp | GATGCAGTTTTGGAACCTCTTTTCATTTGTGAACTTGGTCAATTACTATGTCACCCAGGAGCCTCCTGCTaGTTGGCCAGTACCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: DAVLEPLFICELGQLLCHPGASC*LASTKK Trigger: CTTCTTGGTACTGGCCAACAAGCAGGAGGCTCCTGG...GTGACATAGTAATTGACCAAGTTCACAAATGAAAAGAGGTTCCAAAACTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS TCA 72 bp | GGACGCCGGCCATGTTGGGGTCTTCCAGGACTTCCTTaGGCTCAGCCACTGCCTCAGGCAAGCGGGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GRRPCWGLPGLP*AQPLPQASGLH Trigger: ATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAGACCCCAACATGGCCGGCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS CAA 90 bp | ACCAAGAAGGGGACGCCGGCCATGTTGGGGTCTTCCAGGACTTCCTaGAGCTCAGCCACTGCCTCAGGCAAGCGGGCTTCATCTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TKKGTPAMLGSSRTS*SSATASGKRASSVL Trigger: CAGCACAGATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAGACCCCAACATGGCCGGCGTCCCCTTCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS GCA 72 bp | CCTGTGAGAGCGCTGCAAGCCCGCAGCTCCCAGCAATaGTTTTGGAACCCTTCCAGGCCCAGCCTGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVRALQARSSQQ*FWNPSRPSLFL Trigger: CAGAAACAGGCTGGGCCTGGAAGGGTTCCAAAAGCATTGCTGGGAGCTGCGGGCTTGCAGCGCTCTCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS CAA 72 bp | TCAAGCAACGGCAGAGCACCAGGAGCCTCCTGCTTGTaGGCCAGTACCAAGAAGGGGACGCCGGCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSNGRAPGASCL*ASTKKGTPAML Trigger: CAACATGGCCGGCGTCCCCTTCTTGGTACTGGCCAACAAGCAGGAGGCTCCTGGTGCTCTGCCGTTGCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS GCA 72 bp | GCTCAGCCACTGCCTCAGGCAAGCGGGCTTCATCTGTaGTGTCCAGCACGTACACAAGGAGGTCGATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AQPLPQASGLHL*CPARTQGGRCL Trigger: AAGGCATCGACCTCCTTGTGTACGTGCTGGACAGCACAGATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS GCA 72 bp | GTTGGGGTCTTCCAGGACTTCCTTGAGCTCAGCCACTaGCTCAGGCAAGCGGGCTTCATCTGTGCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VGVFQDFLELSH*LRQAGFICAVQ Trigger: CTGGACAGCACAGATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGCTCAAGGAAGTCCTGGAAGACCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS CAA 72 bp | ATTTCAAGCAACGGCAGAGCACCAGGAGCCTCCTGCTaGTTGGCCAGTACCAAGAAGGGGACGCCGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: ISSNGRAPGASC*LASTKKGTPAM Trigger: CATGGCCGGCGTCCCCTTCTTGGTACTGGCCAACAAGCAGGAGGCTCCTGGTGCTCTGCCGTTGCTTGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS CAA 90 bp | TTTCTGATTTCAAGCAACGGCAGAGCACCAGGAGCCTCCTGCTTGTaGGCCAGTACCAAGAAGGGGACGCCGGCCATGTTGGGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLISSNGRAPGASCL*ASTKKGTPAMLGSS Trigger: GGAAGACCCCAACATGGCCGGCGTCCCCTTCTTGGTACTGGCCAACAAGCAGGAGGCTCCTGGTGCTCTGCCGTTGCTTGAAATCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS CAA 90 bp | CTGTTTCTGATTTCAAGCAACGGCAGAGCACCAGGAGCCTCCTGCTaGTTGGCCAGTACCAAGAAGGGGACGCCGGCCATGTTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LFLISSNGRAPGASC*LASTKKGTPAMLGS Trigger: AGACCCCAACATGGCCGGCGTCCCCTTCTTGGTACTGGCCAACAAGCAGGAGGCTCCTGGTGCTCTGCCGTTGCTTGAAATCAGAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS TCA 72 bp | GAGCTGGGTCTGTCCCCCAATGTCCCAGAGAGTCAGTaGCACATGTCCAGGAGCCTCAAGAGGCTCTACATT | + |
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Preference number: 6 (lower is better) Translates to: ELGLSPNVPESQ*HMSRSLKRLYI Trigger: AATGTAGAGCCTCTTGAGGCTCCTGGACATGTGTCACTGACTCTCTGGGACATTGGGGGACAGACCCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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| CDS TCA 72 bp | AATGCTTTTGGAACCCTTCCAGGCCCAGCCTGTTTCTaGTTTCAAGCAACGGCAGAGCACCAGGAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: NAFGTLPGPACF*FQATAEHQEPP Trigger: AGGAGGCTCCTGGTGCTCTGCCGTTGCTTGAAATCAGAAACAGGCTGGGCCTGGAAGGGTTCCAAAAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055159.8 ENSMUST00000224727.2 |
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