Pregenerated sensors for ARIH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064145Ensembl transcript IDs: ENSMUST00000013338.14, ENSMUST00000193190.6, ENSMUST00000193552.6, ENSMUST00000194073.6
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGATGAGACGCCACCAGCTACAGGTTGGCAGAGCCTCCTGCAGTaGCAATGGTCAGGGTCACAGCTGAGGAGTGGAGGATGGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TDETPPATGWQSLLQ*QWSGSQLRSGGWQL Trigger: CAGCTGCCATCCTCCACTCCTCAGCTGTGACCCTGACCATTGGCACTGCAGGAGGCTCTGCCAACCTGTAGCTGGTGGCGTCTCATCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR GCA 90 bp | GGATGGCAGCTGTGCAGTTCAGAAAGTACCAAGGGGGAGTTAGGCTaGAGAGCTGCAACTCTGGTGCTGTGTCACGGCAGTGCCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: GWQLCSSESTKGELG*RAATLVLCHGSATG Trigger: GCCAGTGGCACTGCCGTGACACAGCACCAGAGTTGCAGCTCTGCAGCCTAACTCCCCCTTGGTACTTTCTGAACTGCACAGCTGCCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR TCA 90 bp | GCTGCAACTCTGGTGCTGTGTCACGGCAGTGCCACTGGCAGGACTTaGTGGAAAGGTCTGTGTGCTAACAGAGCATCACAGCCACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AATLVLCHGSATGRT*WKGLCANRASQPPW Trigger: CCAGGGTGGCTGTGATGCTCTGTTAGCACACAGACCTTTCCATCAAGTCCTGCCAGTGGCACTGCCGTGACACAGCACCAGAGTTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR TCA 90 bp | CTCCCAACCTCACTTGTCAGGGATGACATGAAGAGACAAAACACCTaGGGAGGTGGGAGAGGACGTGCAGCTCCATGTACCCCAGGCGTC | + |
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Preference number: 1 (lower is better) Translates to: LPTSLVRDDMKRQNT*GGGRGRAAPCTPGV Trigger: GACGCCTGGGGTACATGGAGCTGCACGTCCTCTCCCACCTCCTCAGGTGTTTTGTCTCTTCATGTCATCCCTGACAAGTGAGGTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR GCA 90 bp | GTGTGCTCCATCCTATTATGCAGGCCAACTCAGTTTCCTACTCTCTaGCACCCGTGCACCTTCCCCAGGACTCCGGCTCCAGTCAAACAT | + |
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Preference number: 1 (lower is better) Translates to: VCSILLCRPTQFPTL*HPCTFPRTPAPVKH Trigger: ATGTTTGACTGGAGCCGGAGTCCTGGGGAAGGTGCACGGGTGGCAGAGAGTAGGAAACTGAGTTGGCCTGCATAATAGGATGGAGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR CCA 90 bp | GCAAAAACAAAGGTTTCCACAGATGAGACGCCACCAGCTACAGGTTaGCAGAGCCTCCTGCAGTGCCAATGGTCAGGGTCACAGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: AKTKVSTDETPPATG*QSLLQCQWSGSQLR Trigger: CCTCAGCTGTGACCCTGACCATTGGCACTGCAGGAGGCTCTGCCAACCTGTAGCTGGTGGCGTCTCATCTGTGGAAACCTTTGTTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR CCA 90 bp | GCCTGTTCCCTTGCACTTGACTGTGCAAGAACTGGTCCTTTCTTCTaGCCAGCCCCTTCTAGTACAGGAACTGAGACCACAAACCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: ACSLALDCARTGPFF*PAPSSTGTETTNQG Trigger: TCCCTGGTTTGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR CCA 90 bp | GTCCAGAGGTGTGGTAGCCCACCTCTGCTGTGGTGCTGGTCTGGATaGCCTGACTTAGCGAAAAACCTCACATTCAAGACTAAAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VQRCGSPPLLWCWSG*PDLAKNLTFKTKSK Trigger: CTTGCTTTTAGTCTTGAATGTGAGGTTTTTCGCTAAGTCAGGCCATCCAGACCAGCACCACAGCAGAGGTGGGCTACCACACCTCTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR GCA 90 bp | TCTAAGAAACATTACCACAACTCCAAGCACCCATTGCTAGCTCAATaGAAGCACGTCTGGGGAGGAGTGTCTCACTTAAATGTGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SKKHYHNSKHPLLAQ*KHVWGGVSHLNVAG Trigger: ACCTGCCACATTTAAGTGAGACACTCCTCCCCAGACGTGCTTGCATTGAGCTAGCAATGGGTGCTTGGAGTTGTGGTAATGTTTCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR TCA 90 bp | GACAATCCTGAGCCATACATGAGATTCCTACACCAACACCATCTTTaGCAAGCACTGAGCAATGCTGTTCCCAACAGCTTCGGCAAAACT | + |
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Preference number: 1 (lower is better) Translates to: DNPEPYMRFLHQHHL*QALSNAVPNSFGKT Trigger: AGTTTTGCCGAAGCTGTTGGGAACAGCATTGCTCAGTGCTTGTCAAAGATGGTGTTGGTGTAGGAATCTCATGTATGGCTCAGGATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTCCAGAGGTGTGGTAGCCCACCTCTGCTGTGGTGCTGGTCTGGATGGCCTGTGGGGCCCTGGCTGTTaGCTGGGTGGTGAAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KSRGVVAHLCCGAGLDGLWGPGC*LGGERQ Trigger: CTGCCTTTCACCACCCAGGCAACAGCCAGGGCCCCA...CAGGCCATCCAGACCAGCACCACAGCAGAGGTGGGCTACCACACCTCTGGACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGGAGTTAGGCTGCAGAGCTGCAACTCTGGTGCTGTGTCACGGCAGTGCGCATCACAGCCACCCTaGGCCTGCAGCAGGGACACT | + |
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Preference number: 2 (lower is better) Translates to: QGGVRLQSCNSGAVSRQCASQPP*ACSRDT Trigger: AGTGTCCCTGCTGCAGGCCCAGGGTGGCTGTGATGC...GCACTGCCGTGACACAGCACCAGAGTTGCAGCTCTGCAGCCTAACTCCCCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGCAGGACTTGATGGAAAGGTCTGTGTGCTAACAGAGCATCACAGCCACGCAGAGCCTACAGCCTaGAGGAGGGCAGCCGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: PLAGLDGKVCVLTEHHSHAEPTA*RRAAGR Trigger: CCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTCTGC...GTGGCTGTGATGCTCTGTTAGCACACAGACCTTTCCATCAAGTCCTGCCAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCGCAGAGCCTACAGCCTaGAGGAGGGCAGCCGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: IQGKCKVLIRGQLNAASTAEPTA*RRAAGR Trigger: CCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTCTGC...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 ENSMUST00000194073.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTGCAACTAGGCAAAGAGAAACACACCCCACCCTGGAGCAGCTTCTGGCCAGTGCGACCTTGCTCTaGTCTGTGCCCTGGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: AAATRQRETHPTLEQLLASATLL*SVPWLS Trigger: GGACAGCCAGGGCACAGAGCAGAGCAAGGTCGCACT...GGCCAGAAGCTGCTCCAGGGTGGGGTGTGTTTCTCTTTGCCTAGTTGCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGGAGTTAGGCTGCAGAGCTGCAACTCTGGTGCTGTGTCACGGCAGTGCAAACACCTGAGGAGGTaGGAGAGGACGTGCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QGGVRLQSCNSGAVSRQCKHLRR*ERTCSS Trigger: GGAGCTGCACGTCCTCTCCCACCTCCTCAGGTGTTT...GCACTGCCGTGACACAGCACCAGAGTTGCAGCTCTGCAGCCTAACTCCCCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGAGCCTGCTGGTATTCAAACTGTATGGGCAGAGCAGGAGGGTCAAAAGGTGGGGCCCTGGCTGTTaGCTGGGTGGTGAAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QLSLLVFKLYGQSRRVKRWGPGC*LGGERQ Trigger: CTGCCTTTCACCACCCAGGCAACAGCCAGGGCCCCA...CCTTTTGACCCTCCTGCTCTGCCCATACAGTTTGAATACCAGCAGGCTCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194073.6 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCAGAGGTGTGGTAGCCCACCTCTGCTGTGGTGCTGGTCTGGATGGCCTGCACGCTGAGGCTCAGTaGCTGGGCAGTATCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: KSRGVVAHLCCGAGLDGLHAEAQ*LGSIKL Trigger: TAACTTGATACTGCCCAGCCACTGAGCCTCAGCGTG...CAGGCCATCCAGACCAGCACCACAGCAGAGGTGGGCTACCACACCTCTGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTTGACTGTGCAAGAACTCTGTTGCCTGGGTGGTaGAAGGCAGAGCCTACAGCC | + |
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Preference number: 2 (lower is better) Translates to: RKDTRQAACSLALDCARTLLPGW*KAEPTA Trigger: GGCTGTAGGCTCTGCCTTTCACCACCCAGGCAACAG...AGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | GAGCCATTTCCGGATTGTGGCGCAGTCTGTGGGGGCGTGATACATCTGTCGACACAGCTTCGGCAAAACTaGTGTTGGCAGGCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EPFPDCGAVCGGVIHLSTQLRQN*CWQARE Trigger: CTCTCTGGCCTGCCAACATCAGTTTTGCCGAAGCTG...TGTCGACAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR-3UTR GCA 90 bp | AGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTTGACTGTGCAAGAACTGGTCGTGGTAGCCCACCTCTaGTGTGGTGCTGGTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: RTPGKLPVPLHLTVQELVVVAHL*CGAGLD Trigger: ATCCAGACCAGCACCACAGCAGAGGTGGGCTACCAC...GACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGCAGGACTTGATGGAAAGGTCTGTGTGCTAACAGAGCATCACAGCCACAGGTGGGAGAGGACGTaGAGCTCCATGTACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLAGLDGKVCVLTEHHSHRWERT*SSMYPR Trigger: CCTGGGGTACATGGAGCTGCACGTCCTCTCCCACCT...GTGGCTGTGATGCTCTGTTAGCACACAGACCTTTCCATCAAGTCCTGCCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTACAGCCTGCAGGAGGGCAGCCGGGCGGCCTCACAGCTACATCTTCCTCGGATTCCATGTAGTATaGATATGGATAGGTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: EPTACRRAAGRPHSYIFLGFHVV*IWIGVL Trigger: CAGTACACCTATCCATATGCATACTACATGGAATCC...GAGGAAGATGTAGCTGTGAGGCCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193190.6 ENSMUST00000194073.6 |
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| 3UTR CAA 90 bp | ACCAGGTTCAAGATAGGAAGGACACCAGGCAAGCTGCCTGTTCCCTaGCACTTGACTGTGCAAGAACTGGTCCTTTCTTCTGGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TRFKIGRTPGKLPVP*HLTVQELVLSSGQP Trigger: GGGCTGGCCAGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTCCTATCTTGAACCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATGGCTCCAGTCAAACATaGTGCTGGAAAGCAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VKYRQLCQSQRGGTEQSHGSSQT*CWKAGA Trigger: GGCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCC...ATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCAGAACAAGTACTTCTTaGGGGCCTCCCTGGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IQGKCKVLIRGQLNAASTRTSTS*GPPWPV Trigger: CACAGGCCAGGGAGGCCCTCAAGAAGTACTTGTTCT...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
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| 3UTR-3UTR GCA 90 bp | ATGGATAGGTGTACTGCAGGGTATATCGACACTTGGCTAAGAGCTTGGCAGCATTGGGGCCCTGGCTGTTaGCTGGGTGGTGAAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MDRCTAGYIDTWLRAWQHWGPGC*LGGERQ Trigger: CTGCCTTTCACCACCCAGGCAACAGCCAGGGCCCCA...ATGCTGCCAAGCTCTTAGCCAAGTGTCGATATACCCTGCAGTACACCTATCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193190.6 ENSMUST00000194073.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATGGACCTTGCTCTGCTCTGTaGCCTGGCTGTCCAGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: KYRQLCQSQRGGTEQSHGPCSAL*PGCPAK Trigger: CTTAGCTGGACAGCCAGGGCACAGAGCAGAGCAAGG...TCCATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCTCCCTGGCCTGTGCTTaGTGGCTCTGGTTGACAATG | + |
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Preference number: 2 (lower is better) Translates to: IQGKCKVLIRGQLNAASTSLACA*WLWLTM Trigger: CATTGTCAACCAGAGCCAGCAAGCACAGGCCAGGGA...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
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| 3UTR-3UTR GCA 90 bp | GAGCCATTTCCGGATTGTGGCGCAGTCTGTGGGGGCGTGATACATCTGTCGACAACAAGCACTGAGCAATaGTGTTCCCAACAGCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: EPFPDCGAVCGGVIHLSTTSTEQ*CSQQLR Trigger: CCGAAGCTGTTGGGAACAGCATTGCTCAGTGCTTGT...TGTCGACAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR-3UTR TCA 90 bp | TGCCACCCGTGCACCTTCCCCAGGACTCCGGCTCCAGTCAAACATGATGCTGGACAAATAGCTAAAGGGTaGAGCACTCCAATGCCAATT | + |
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Preference number: 2 (lower is better) Translates to: CHPCTFPRTPAPVKHDAGQIAKG*STPMPI Trigger: AATTGGCATTGGAGTGCTTCACCCTTTAGCTATTTG...TCCAGCATCATGTTTGACTGGAGCCGGAGTCCTGGGGAAGGTGCACGGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | CCACTGGCAGGACTTGATGGAAAGGTCTGTGTGCTAACAGAGCATCACAGCCACCTGTTCCCTTGCACTTaGCTGTGCAAGAACTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PLAGLDGKVCVLTEHHSHLFPCT*LCKNWS Trigger: GGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAG...GTGGCTGTGATGCTCTGTTAGCACACAGACCTTTCCATCAAGTCCTGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATTTCCGGATTGTGGCGCAGTCTGTGGGGGCGTGATACATCTGTCGACACTCTGGTGTTCGAAGTaGACAATCCTGAGCCATACA | + |
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Preference number: 2 (lower is better) Translates to: EPFPDCGAVCGGVIHLSTLWCSK*TILSHT Trigger: TGTATGGCTCAGGATTGTCCACTTCGAACACCAGAG...TGTCGACAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR CAA 90 bp | TTCAAGATAGGAAGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTaGACTGTGCAAGAACTGGTCCTTTCTTCTGGCCAGCCCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: FKIGRTPGKLPVPLH*TVQELVLSSGQPLL Trigger: TAGAAGGGGCTGGCCAGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTCCTATCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTTGACTGTGCAAGAACTAAGAACACAAGACAGTaGCCCAGGTCAGAGTACACC | + |
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Preference number: 2 (lower is better) Translates to: RKDTRQAACSLALDCARTKNTRQ*PRSEYT Trigger: GGTGTACTCTGACCTGGGTCACTGTCTTGTGTTCTT...AGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | GAGCCATTTCCGGATTGTGGCGCAGTCTGTGGGGGCGTGATACATCTGTCGACAATCTTTGACAAGCACTaGGCAATGCTGTTCCCAACA | + |
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Preference number: 2 (lower is better) Translates to: EPFPDCGAVCGGVIHLSTIFDKH*AMLFPT Trigger: TGTTGGGAACAGCATTGCTCAGTGCTTGTCAAAGAT...TGTCGACAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATGAGCCACAAGACCCATaGCCTTGGTCTAAGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VKYRQLCQSQRGGTEQSHEPQDP*PWSKSH Trigger: ATGGCTCTTAGACCAAGGGCATGGGTCTTGTGGCTC...ATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAACGCTCAACTTTCCATaGAAGGTTTTCGATCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PHPGTATAQFRCRENPLATLNFP*KVFDLS Trigger: GCTGAGATCGAAAACCTTTCATGGAAAGTTGAGCGT...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000193190.6 ENSMUST00000194073.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGCAACTAGGCAAAGAGAAACACACCCCACCCTGGAGCAGCTTCTGGCCAAAAAGAAACTCATCTaGGGAACAACTCCTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: AAATRQRETHPTLEQLLAKKKLI*GTTPLK Trigger: TTTGAGAGGAGTTGTTCCCCAGATGAGTTTCTTTTT...GGCCAGAAGCTGCTCCAGGGTGGGGTGTGTTTCTCTTTGCCTAGTTGCAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCACATGTAGTATGCATATaGATAGGTGTACTGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PHPGTATAQFRCRENPLAHVVCI*IGVLQG Trigger: ACCCTGCAGTACACCTATCCATATGCATACTACATG...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193190.6 ENSMUST00000194073.6 |
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| 3UTR CAA 90 bp | CATCAGCTCGGTTCTAAGAAACATTACCACAACTCCAAGCACCCATaGCTAGCTCAATGCAAGCACGTCTGGGGAGGAGTGTCTCACTTA | + |
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Preference number: 2 (lower is better) Translates to: HQLGSKKHYHNSKHP*LAQCKHVWGGVSHL Trigger: TAAGTGAGACACTCCTCCCCAGACGTGCTTGCATTGAGCTAGCAATGGGTGCTTGGAGTTGTGGTAATGTTTCTTAGAACCGAGCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| 3UTR-3UTR GCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAGGATTCCATGTAGTATaGATATGGATAGGTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: PHPGTATAQFRCRENPLAGFHVV*IWIGVL Trigger: CAGTACACCTATCCATATGCATACTACATGGAATCC...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193190.6 ENSMUST00000194073.6 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTTTCTTCTGGCCAGCCCCTTCTAGTACAGGAACTGAGACCACAAACCAGGGTGAAGCACTCCAATaGCAATTTATTTTAATCGGG | + |
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Preference number: 2 (lower is better) Translates to: GPFFWPAPSSTGTETTNQGEALQ*QFILIG Trigger: CCCGATTAAAATAAATTGGCATTGGAGTGCTTCACC...CTGGTTTGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCATGTACCCCAGGCGTCACAGCTGTCACCTGGCTTCAAGAATAATTCAATGCTCCATCCTATTATaGAGGCCAACTCAGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSMYPRRHSCHLASRIIQCSILL*RPTQFP Trigger: AGGAAACTGAGTTGGCCTGCATAATAGGATGGAGCA...TTGAATTATTCTTGAAGCCAGGTGACAGCTGTGACGCCTGGGGTACATGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAACTGTTGCCTGGGTGGTaGAAGGCAGAGCCTACAGCC | + |
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Preference number: 2 (lower is better) Translates to: ALCYLCFASFLYNRTTFELLPGW*KAEPTA Trigger: GGCTGTAGGCTCTGCCTTTCACCACCCAGGCAACAG...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAACGCTGCTCTGCTATGTaGATCTGGTTTTCTAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ALCYLCFASFLYNRTTFERCSAM*IWFSKS Trigger: GGACTTAGAAAACCAGATGCACATAGCAGAGCAGCG...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
||
| 3UTR GCA 72 bp | GCTGGAAAGCAGGGGCCGTCCCAGGGCCCCCGGCAGTaGAGACACGCTGAGGCTCAGTGGCTGGGCAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: AGKQGPSQGPRQ*RHAEAQWLGSI Trigger: GATACTGCCCAGCCACTGAGCCTCAGCGTGTCTGCACTGCCGGGGGCCCTGGGACGGCCCCTGCTTTCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR TCA 72 bp | GGGGCCGTCCCAGGGCCCCCGGCAGTGCAGACACGCTaGGGCTCAGTGGCTGGGCAGTATCAAGTTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: GAVPGPPAVQTR*GSVAGQYQVTF Trigger: GAATGTAACTTGATACTGCCCAGCCACTGAGCCTCAGCGTGTCTGCACTGCCGGGGGCCCTGGGACGGCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR GCA 72 bp | TGCAGGCCAACTCAGTTTCCTACTCTCTGCCACCCGTaGACCTTCCCCAGGACTCCGGCTCCAGTCAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: CRPTQFPTLCHP*TFPRTPAPVKH Trigger: ATGTTTGACTGGAGCCGGAGTCCTGGGGAAGGTGCACGGGTGGCAGAGAGTAGGAAACTGAGTTGGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR GCA 72 bp | ATCCTATTATGCAGGCCAACTCAGTTTCCTACTCTCTaGCACCCGTGCACCTTCCCCAGGACTCCGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILLCRPTQFPTL*HPCTFPRTPAP Trigger: TGGAGCCGGAGTCCTGGGGAAGGTGCACGGGTGGCAGAGAGTAGGAAACTGAGTTGGCCTGCATAATAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR CCA 72 bp | AAAGGTCTGTGTGCTAACAGAGCATCACAGCCACCCTaGGCCTGCAGCAGGGACACTCCTGGGTCACAATCA | + |
|
Preference number: 3 (lower is better) Translates to: KGLCANRASQPP*ACSRDTPGSQS Trigger: TGATTGTGACCCAGGAGTGTCCCTGCTGCAGGCCCAGGGTGGCTGTGATGCTCTGTTAGCACACAGACCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR CCA 72 bp | AAGGTTTCCACAGATGAGACGCCACCAGCTACAGGTTaGCAGAGCCTCCTGCAGTGCCAATGGTCAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KVSTDETPPATG*QSLLQCQWSGS Trigger: TGACCCTGACCATTGGCACTGCAGGAGGCTCTGCCAACCTGTAGCTGGTGGCGTCTCATCTGTGGAAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAGCAGGGACACTCCTGGGTCACAATCAGCTCCCATTGGTGTTAGGGTTCCCTGTTCCCTTGCACTaGACTGTGCAAGAACTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PAAGTLLGHNQLPLVLGFPVPLH*TVQELV Trigger: GACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGG...GAACCCTAACACCAATGGGAGCTGATTGTGACCCAGGAGTGTCCCTGCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR TCA 72 bp | GAAGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTTaGCTGTGCAAGAACTGGTCCTTTCTTCTGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGHQASCLFPCT*LCKNWSFLLAS Trigger: GCTGGCCAGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR TCA 72 bp | CTGGTGCTGTGTCACGGCAGTGCCACTGGCAGGACTTaGTGGAAAGGTCTGTGTGCTAACAGAGCATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LVLCHGSATGRT*WKGLCANRASQ Trigger: CTGTGATGCTCTGTTAGCACACAGACCTTTCCATCAAGTCCTGCCAGTGGCACTGCCGTGACACAGCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR GCA 72 bp | CTGTGCAGTTCAGAAAGTACCAAGGGGGAGTTAGGCTaGAGAGCTGCAACTCTGGTGCTGTGTCACGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCSSESTKGELG*RAATLVLCHGS Trigger: ACTGCCGTGACACAGCACCAGAGTTGCAGCTCTGCAGCCTAACTCCCCCTTGGTACTTTCTGAACTGCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAGGGAGGGTATATCGACACTaGGCTAAGAGCTTGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HPGTATAQFRCRENPLAGRVYRH*AKSLAA Trigger: TGCTGCCAAGCTCTTAGCCAAGTGTCGATATACCCT...CCCTGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193190.6 ENSMUST00000194073.6 |
||
| 3UTR CCA 72 bp | GCCCCCGGCAGTGCAGACACGCTGAGGCTCAGTGGCTaGGCAGTATCAAGTTACATTCTAAGTCAAATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: APGSADTLRLSG*AVSSYILSQIA Trigger: AGCTATTTGACTTAGAATGTAACTTGATACTGCCCAGCCACTGAGCCTCAGCGTGTCTGCACTGCCGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR CCA 72 bp | GGCCTTAGACTCCCAGACCATAGAGATGGGGACTTCTaGCAGCTGCAACTAGGCAAAGAGAAACACACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLRLPDHRDGDF*QLQLGKEKHTP Trigger: TGGGGTGTGTTTCTCTTTGCCTAGTTGCAGCTGCCAGAAGTCCCCATCTCTATGGTCTGGGAGTCTAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATTTCCGGATTGTGGCGCAGTCTGTGGGGGCGTGATACATCTGTCGACAACACCAACACCATCTTaGACAAGCACTGAGCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: EPFPDCGAVCGGVIHLSTTPTPS*TSTEQC Trigger: GCATTGCTCAGTGCTTGTCAAAGATGGTGTTGGTGT...TGTCGACAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
||
| 3UTR TCA 72 bp | TCACTTGTCAGGGATGACATGAAGAGACAAAACACCTaGGGAGGTGGGAGAGGACGTGCAGCTCCATGTACC | + |
|
Preference number: 3 (lower is better) Translates to: SLVRDDMKRQNT*GGGRGRAAPCT Trigger: GGTACATGGAGCTGCACGTCCTCTCCCACCTCCTCAGGTGTTTTGTCTCTTCATGTCATCCCTGACAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR GCA 72 bp | GTGAGCACTAATGTAGTTAGCCGTTTCGGAGTCGTCTaGACACTTGGTGAGCCATTTCCGGATTGTGGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSTNVVSRFGVV*TLGEPFPDCGA Trigger: TGCGCCACAATCCGGAAATGGCTCACCAAGTGTGCAGACGACTCCGAAACGGCTAACTACATTAGTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
||
| 3UTR CCA 72 bp | TGTGGTAGCCCACCTCTGCTGTGGTGCTGGTCTGGATaGCCTGACTTAGCGAAAAACCTCACATTCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CGSPPLLWCWSG*PDLAKNLTFKT Trigger: AGTCTTGAATGTGAGGTTTTTCGCTAAGTCAGGCCATCCAGACCAGCACCACAGCAGAGGTGGGCTACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR CCA 72 bp | TCCAAGCACCCATTGCTAGCTCAATGCAAGCACGTCTaGGGAGGAGTGTCTCACTTAAATGTGGCAGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SKHPLLAQCKHV*GGVSHLNVAGH Trigger: GTGACCTGCCACATTTAAGTGAGACACTCCTCCCCAGACGTGCTTGCATTGAGCTAGCAATGGGTGCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
||
| 3UTR CCA 72 bp | CTTGCACTTGACTGTGCAAGAACTGGTCCTTTCTTCTaGCCAGCCCCTTCTAGTACAGGAACTGAGACCACA | + |
|
Preference number: 3 (lower is better) Translates to: LALDCARTGPFF*PAPSSTGTETT Trigger: TGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAAGCCTGCAGTGCGACCTaGCTCTGCTCTGTGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALCYLCFASFLYNRTTFEACSAT*LCSVPW Trigger: CCAGGGCACAGAGCAGAGCAAGGTCGCACTGCAGGC...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR GCA 72 bp | CATTACCACAACTCCAAGCACCCATTGCTAGCTCAATaGAAGCACGTCTGGGGAGGAGTGTCTCACTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HYHNSKHPLLAQ*KHVWGGVSHLN Trigger: ATTTAAGTGAGACACTCCTCCCCAGACGTGCTTGCATTGAGCTAGCAATGGGTGCTTGGAGTTGTGGTAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
||
| 3UTR TCA 72 bp | TTTCTTTTCTTTAAGAAACAAAAGGAAGCACCATGCTaGACCAGTCTCCAAGTCCAGAGGTGTGGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLFFKKQKEAPC*TSLQVQRCGSP Trigger: TGGGCTACCACACCTCTGGACTTGGAGACTGGTTCAGCATGGTGCTTCCTTTTGTTTCTTAAAGAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR TCA 72 bp | GTATCAAGTTACATTCTAAGTCAAATAGCTAAAGGGTaGAGCACTCCAATGCCAATTTATTTTAATCGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSSYILSQIAKG*STPMPIYFNRA Trigger: AGCCCGATTAAAATAAATTGGCATTGGAGTGCTTCACCCTTTAGCTATTTGACTTAGAATGTAACTTGATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR CCA 90 bp | CGGCTCCAGTCAAACATGATGCTGGAAAGCAGGGGCCGTCCCAGGGCCCCCGGCTTGTGGCGCAGTCTGTaGGGGCGTGATACATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLQSNMMLESRGRPRAPGLWRSL*GRDTSV Trigger: GACAGATGTATCACGCCCCCACAGACTGCGCCACAA...GCCGGGGGCCCTGGGACGGCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR CCA 90 bp | GAGCCTACAGCCTGCAGGAGGGCAGCCGGGCGGCCTCACAGCTACATCTTCCTCAGACAGAGGCTAAGCTaGTCATATGTTCATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPTACRRAAGRPHSYIFLRQRLS*SYVHGG Trigger: CCCTCCATGAACATATGACCAGCTTAGCCTCTGTCT...GAGGAAGATGTAGCTGTGAGGCCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR CCA 90 bp | GAGCCTACAGCCTGCAGGAGGGCAGCCGGGCGGCCTCACAGCTACATCTTCCTCCTCTGGTGTTCGAAGTaGACAATCCTGAGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: EPTACRRAAGRPHSYIFLLWCSK*TILSHT Trigger: TGTATGGCTCAGGATTGTCCACTTCGAACACCAGAG...GAGGAAGATGTAGCTGTGAGGCCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR TCA 90 bp | GAGCCTACAGCCTGCAGGAGGGCAGCCGGGCGGCCTCACAGCTACATCTTCCTCTTGGAGCATTGCATGTaGTTACAGCCTCCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTACRRAAGRPHSYIFLLEHCM*LQPPFF Trigger: GAAGAATGGAGGCTGTAATCACATGCAATGCTCCAA...GAGGAAGATGTAGCTGTGAGGCCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCGCACCGGGGCACAGCTaGAGCTGGAAATGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTAPGHS*SWKWLS Trigger: GGAGAGCCATTTCCAGCTCCAGCTGTGCCCCGGTGC...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR CCA 90 bp | CGGCTCCAGTCAAACATGATGCTGGAAAGCAGGGGCCGTCCCAGGGCCCCCGGCCATGTAGTATGCATATaGATAGGTGTACTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLQSNMMLESRGRPRAPGHVVCI*IGVLQG Trigger: ACCCTGCAGTACACCTATCCATATGCATACTACATG...GCCGGGGGCCCTGGGACGGCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR TCA 90 bp | CGGCTCCAGTCAAACATGATGCTGGAAAGCAGGGGCCGTCCCAGGGCCCCCGGCTATAGGTCAAGCAAGTaGACTGATACTCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLQSNMMLESRGRPRAPGYRSSK*TDTLQD Trigger: ATCCTGAAGAGTATCAGTTCACTTGCTTGACCTATA...GCCGGGGGCCCTGGGACGGCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR TCA 90 bp | GCACCTTCCCCAGGACTCCGGCTCCAGTCAAACATGATGCTGGAAAGCAGGGGCACATCTGTCGACACTTaGAACAGAAGACCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: APSPGLRLQSNMMLESRGTSVDT*NRRPRC Trigger: GCAGCGAGGTCTTCTGTTTCAAGTGTCGACAGATGT...GCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCCGGAGTCCTGGGGAAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR TCA 90 bp | CACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAGGGCAGTCTGTGGGGGCGTaGTACATCTGTCGACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGTATAQFRCRENPLAGQSVGA*YICRHL Trigger: CAAGTGTCGACAGATGTATCACGCCCCCACAGACTG...CCCTGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCGCCATTTCCGGATTGTaGCGCAGTCTGTGGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTAISGL*RSLWGR Trigger: ACGCCCCCACAGACTGCGCCACAATCCGGAAATGGC...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR CCA 90 bp | GAGCCTACAGCCTGCAGGAGGGCAGCCGGGCGGCCTCACAGCTACATCTTCCTCAGTCGTGCTTACACTTaGAGCATTGCATGTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: EPTACRRAAGRPHSYIFLSRAYT*SIACDY Trigger: GTAATCACATGCAATGCTCCAAGTGTAAGCACGACT...GAGGAAGATGTAGCTGTGAGGCCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR TCA 90 bp | GAGCCTACAGCCTGCAGGAGGGCAGCCGGGCGGCCTCACAGCTACATCTTCCTCTATAGGTCAAGCAAGTaGACTGATACTCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPTACRRAAGRPHSYIFLYRSSK*TDTLQD Trigger: ATCCTGAAGAGTATCAGTTCACTTGCTTGACCTATA...GAGGAAGATGTAGCTGTGAGGCCGCCCGGCTGCCCTCCTGCAGGCTGTAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR CCA 90 bp | AAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATGGAGCCATTTCCGGATTGTaGCGCAGTCTGTGGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KYRQLCQSQRGGTEQSHGAISGL*RSLWGR Trigger: ACGCCCCCACAGACTGCGCCACAATCCGGAAATGGC...TCCATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| 3UTR CAA 72 bp | GGAAGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTaGACTGTGCAAGAACTGGTCCTTTCTTCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRTPGKLPVPLH*TVQELVLSSGQ Trigger: CTGGCCAGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR TCA 90 bp | GTCCTTTCTTCTGGCCAGCCCCTTCTAGTACAGGAACTGAGACCACAAACCAGGCAGCTTCGGCAAAACTaGTGTTGGCAGGCCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSSGQPLLVQELRPQTRQLRQN*CWQARE Trigger: CTCTCTGGCCTGCCAACATCAGTTTTGCCGAAGCTG...CCTGGTTTGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCCAGCTTCGGCAAAACTaGTGTTGGCAGGCCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTQLRQN*CWQARE Trigger: CTCTCTGGCCTGCCAACATCAGTTTTGCCGAAGCTG...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR GCA 90 bp | GCACCTTCCCCAGGACTCCGGCTCCAGTCAAACATGATGCTGGAAAGCAGGGGCCATAGTCCTCTTCATTaGTATCTGACCCTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APSPGLRLQSNMMLESRGHSPLH*YLTLGC Trigger: ACAGCCAAGGGTCAGATAGCAATGAAGAGGACTATG...GCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCCGGAGTCCTGGGGAAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR GCA 90 bp | CACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAGGGACAAGCACTGAGCAATaGTGTTCCCAACAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HPGTATAQFRCRENPLAGTSTEQ*CSQQLR Trigger: CCGAAGCTGTTGGGAACAGCATTGCTCAGTGCTTGT...CCCTGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
||
| CDS-3UTR GCA 90 bp | GTGCAGCTCCATGTACCCCAGGCGTCACAGCTGTCACCTGGCTTCAAGAATAATTCCCTGGCCTGTGCTTaGTGGCTCTGGTTGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VQLHVPQASQLSPGFKNNSLACA*WLWLTM Trigger: CATTGTCAACCAGAGCCAGCAAGCACAGGCCAGGGA...ATTATTCTTGAAGCCAGGTGACAGCTGTGACGCCTGGGGTACATGGAGCTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAGCCTGCTGGTATTCAAACTGTATGGGCAGAGCAGGAGGGTCAAAAGGTCCCTGGCCTGTGCTTaGTGGCTCTGGTTGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLSLLVFKLYGQSRRVKRSLACA*WLWLTM Trigger: CATTGTCAACCAGAGCCAGCAAGCACAGGCCAGGGA...CCTTTTGACCCTCCTGCTCTGCCCATACAGTTTGAATACCAGCAGGCTCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194073.6 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAGCCTCAACAAGCAGCTaGGCAGAATTAGACCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPGTATAQFRCRENPLAASTSS*AELDLY Trigger: GTACAGGTCTAATTCTGCTCAGCTGCTTGTTGAGGC...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
||
| CDS-3UTR CCA 90 bp | GAGCCATTTCCGGATTGTGGCGCAGTCTGTGGGGGCGTGATACATCTGTCGACAAGACAGAGGCTAAGCTaGTCATATGTTCATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPFPDCGAVCGGVIHLSTRQRLS*SYVHGG Trigger: CCCTCCATGAACATATGACCAGCTTAGCCTCTGTCT...TGTCGACAGATGTATCACGCCCCCACAGACTGCGCCACAATCCGGAAATGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCACTCTTCATTGCTATCTaGCCCTTGGCTGTTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPGTATAQFRCRENPLALFIAI*PLAVHV Trigger: GACATGAACAGCCAAGGGTCAGATAGCAATGAAGAG...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAATCCTGAGCCATACATaGGATTCCTACACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PHPGTATAQFRCRENPLAILSHT*DSYTNT Trigger: GGTGTTGGTGTAGGAATCTCATGTATGGCTCAGGAT...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
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| CDS-3UTR TCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCACATCTGTCGACACTTaGAACAGAAGACCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTTSVDT*NRRPRC Trigger: GCAGCGAGGTCTTCTGTTTCAAGTGTCGACAGATGT...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTTCTTCCTGGGACCGGATTCCATGTAGTATGCATATGGATAGGTGTAAGAACAAGTACTTCTTaGGGGCCTCCCTGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQLLPGTGFHVVCIWIGVRTSTS*GPPWPV Trigger: CACAGGCCAGGGAGGCCCTCAAGAAGTACTTGTTCT...TACACCTATCCATATGCATACTACATGGAATCCGGTCCCAGGAAGAAGCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194073.6 |
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| CDS-3UTR TCA 90 bp | AGAGACAAAACACCTGAGGAGGTGGGAGAGGACGTGCAGCTCCATGTACCCCAGACGCTCAACTTTCCATaGAAGGTTTTCGATCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDKTPEEVGEDVQLHVPQTLNFP*KVFDLS Trigger: GCTGAGATCGAAAACCTTTCATGGAAAGTTGAGCGT...CTGGGGTACATGGAGCTGCACGTCCTCTCCCACCTCCTCAGGTGTTTTGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR GCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCTCTCCTCCGCTGCTCTaGTATGTGCATCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTSPPLL*YVHLVF Trigger: GAAAACCAGATGCACATAGCAGAGCAGCGGAGGAGA...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | AGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTTGACTGTGCAAGAACTGGTCGGGTATATCGACACTTaGCTAAGAGCTTGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTPGKLPVPLHLTVQELVGYIDT*LRAWQH Trigger: ATGCTGCCAAGCTCTTAGCCAAGTGTCGATATACCC...GACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | GACGTGCAGCTCCATGTACCCCAGGCGTCACAGCTGTCACCTGGCTTCAAGAATTCTGCTATGTGCATCTaGTTTTCTAAGTCCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DVQLHVPQASQLSPGFKNSAMCI*FSKSPL Trigger: CAGAGGGGACTTAGAAAACCAGATGCACATAGCAGA...ATTCTTGAAGCCAGGTGACAGCTGTGACGCCTGGGGTACATGGAGCTGCACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | GTCCTTTCTTCTGGCCAGCCCCTTCTAGTACAGGAACTGAGACCACAAACCAGGCTCTTCATTGCTATCTaGCCCTTGGCTGTTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLSSGQPLLVQELRPQTRLFIAI*PLAVHV Trigger: GACATGAACAGCCAAGGGTCAGATAGCAATGAAGAG...CCTGGTTTGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAATCTTTGACAAGCACTaGGCAATGCTGTTCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PHPGTATAQFRCRENPLAIFDKH*AMLFPT Trigger: TGTTGGGAACAGCATTGCTCAGTGCTTGTCAAAGAT...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
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| CDS-3UTR TCA 90 bp | CATGAGATTCCTACACCAACACCATCTTTGACAAGCACTGAGCAATGCTGTTCCCGCAGCCGATGGCAGTaGGCATCAACGGCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HEIPTPTPSLTSTEQCCSRSRWQ*ASTAFK Trigger: CTTAAAGGCCGTTGATGCTCACTGCCATCGGCTGCG...GGAACAGCATTGCTCAGTGCTTGTCAAAGATGGTGTTGGTGTAGGAATCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193552.6 |
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| CDS-3UTR CCA 90 bp | GTCCTTTCTTCTGGCCAGCCCCTTCTAGTACAGGAACTGAGACCACAAACCAGGAGACAGAGGCTAAGCTaGTCATATGTTCATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSSGQPLLVQELRPQTRRQRLS*SYVHGG Trigger: CCCTCCATGAACATATGACCAGCTTAGCCTCTGTCT...CCTGGTTTGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | AGGGGAGGCACTGAACAAAGCCATGGAAACCCCAGAGATCACAGATCTAACTTTGAGGGGGATGGGCTGTaGGGACATGTTTGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGGTEQSHGNPRDHRSNFEGDGL*GHVWMD Trigger: ATCCATCCAAACATGTCCCCACAGCCCATCCCCCTC...AAAGTTAGATCTGTGATCTCTGGGGTTTCCATGGCTTTGTTCAGTGCCTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | AACAACCAAGGAAAAAGAAACTCATCTGGGGAACAACTCCTCTCAAAGGTGGATGCACCGGGGCACAGCTaGAGCTGGAAATGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNQGKRNSSGEQLLSKVDAPGHS*SWKWLS Trigger: GGAGAGCCATTTCCAGCTCCAGCTGTGCCCCGGTGC...ATCCACCTTTGAGAGGAGTTGTTCCCCAGATGAGTTTCTTTTTCCTTGGTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | GTCAAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATCCTGTCCAGAATCTCTaGGACTTGCCAGTGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: VKYRQLCQSQRGGTEQSHPVQNL*DLPVEI Trigger: AATTTCCACTGGCAAGTCTCAGAGATTCTGGACAGG...ATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCATCTTTGACAAGCACTaGGCAATGCTGTTCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTIFDKH*AMLFPT Trigger: TGTTGGGAACAGCATTGCTCAGTGCTTGTCAAAGAT...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| CDS-3UTR GCA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCCATAGTCCTCTTCATTaGTATCTGACCCTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQGKCKVLIRGQLNAASTHSPLH*YLTLGC Trigger: ACAGCCAAGGGTCAGATAGCAATGAAGAGGACTATG...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| CDS-3UTR GCA 90 bp | AAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATGGAATCCAGCAGAAGTCGTaGTTACACTTGGAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYRQLCQSQRGGTEQSHGIQQKS*LHLEHC Trigger: GCAATGCTCCAAGTGTAAGCACGACTTCTGCTGGAT...TCCATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | CACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAGGGAAATACAAAGTCCTCTaGTGTTCGAAGTGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: HPGTATAQFRCRENPLAGKYKVL*CSKWTI Trigger: GATTGTCCACTTCGAACACCAGAGGACTTTGTATTT...CCCTGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
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| 3UTR CAA 72 bp | AAGATAGGAAGGACACCAGGCAAGCTGCCTGTTCCCTaGCACTTGACTGTGCAAGAACTGGTCCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIGRTPGKLPVP*HLTVQELVLSS Trigger: AGAAGAAAGGACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCTTCCTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | GAACACAAGACAGTGACCCAGGTCAGAGTACACCACTTGAATACTGGATCAAAACAGTCTGTGGGGGCGTaGTACATCTGTCGACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EHKTVTQVRVHHLNTGSKQSVGA*YICRHL Trigger: CAAGTGTCGACAGATGTATCACGCCCCCACAGACTG...TTTTGATCCAGTATTCAAGTGGTGTACTCTGACCTGGGTCACTGTCTTGTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR GCA 90 bp | ACGTGCAGCTCCATGTACCCCAGGCGTCACAGCTGTCACCTGGCTTCAAGAATAGGATTCCATGTAGTATaGATATGGATAGGTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSSMYPRRHSCHLASRIGFHVV*IWIGVL Trigger: CAGTACACCTATCCATATGCATACTACATGGAATCC...TATTCTTGAAGCCAGGTGACAGCTGTGACGCCTGGGGTACATGGAGCTGCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | TTAGCGAAAAACCTCACATTCAAGACTAAAAGCAAGCCTGCAGTGCGACCTTGCGCCTCAACAAGCAGCTaGGCAGAATTAGACCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAKNLTFKTKSKPAVRPCASTSS*AELDLY Trigger: GTACAGGTCTAATTCTGCTCAGCTGCTTGTTGAGGC...GCAAGGTCGCACTGCAGGCTTGCTTTTAGTCTTGAATGTGAGGTTTTTCGCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR GCA 90 bp | ACTATACTATTACTCCCAATCCACCTCCCAACCTCACTTGTCAGGGATGACATGCGTTTCGGAGTCGTCTaGACACTTGGTGAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TILLLPIHLPTSLVRDDMRFGVV*TLGEPF Trigger: AAATGGCTCACCAAGTGTGCAGACGACTCCGAAACG...CATGTCATCCCTGACAAGTGAGGTTGGGAGGTGGATTGGGAGTAATAGTATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR GCA 90 bp | AGGGGAGGCACTGAACAAAGCCATGGAAACCCCAGAGATCACAGATCTAACTTTCGCTGCTCTGCTATGTaGATCTGGTTTTCTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGGTEQSHGNPRDHRSNFRCSAM*IWFSKS Trigger: GGACTTAGAAAACCAGATGCACATAGCAGAGCAGCG...AAAGTTAGATCTGTGATCTCTGGGGTTTCCATGGCTTTGTTCAGTGCCTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTAAGAAACAAAAGGAAGCACCATGCTGAACCAGTCTCCAAGTCCAGAAGAACAAGTACTTCTTaGGGGCCTCCCTGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLRNKRKHHAEPVSKSRRTSTS*GPPWPV Trigger: CACAGGCCAGGGAGGCCCTCAAGAAGTACTTGTTCT...TCTGGACTTGGAGACTGGTTCAGCATGGTGCTTCCTTTTGTTTCTTAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | GTCAAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATAAATACAAAGTCCTCTaGTGTTCGAAGTGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VKYRQLCQSQRGGTEQSHKYKVL*CSKWTI Trigger: GATTGTCCACTTCGAACACCAGAGGACTTTGTATTT...ATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | CCATACTCTACTATACTATTACTCCCAATCCACCTCCCAACCTCACTTGTCAGGCAAACAGCTTCTTCCTaGGACCGGATTCCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PYSTILLLPIHLPTSLVRQTASS*DRIPCS Trigger: ACTACATGGAATCCGGTCCCAGGAAGAAGCTGTTTG...CCTGACAAGTGAGGTTGGGAGGTGGATTGGGAGTAATAGTATAGTAGAGTATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR CAA 72 bp | ATCTGGTCAGGTCATGGAAACACCTTTCTCTACCCTTaGCAGGGTAAAAACACCAAGCCAAACCCTACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWSGHGNTFLYP*QGKNTKPNPTS Trigger: AGAGGTAGGGTTTGGCTTGGTGTTTTTACCCTGCAAAGGGTAGAGAAAGGTGTTTCCATGACCTGACCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAAGAGGGGGATGGGCTGTaGGGACATGTTTGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALCYLCFASFLYNRTTFEEGDGL*GHVWMD Trigger: ATCCATCCAAACATGTCCCCACAGCCCATCCCCCTC...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAATTGTGGCGCAGTCTGTaGGGGCGTGATACATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALCYLCFASFLYNRTTFELWRSL*GRDTSV Trigger: GACAGATGTATCACGCCCCCACAGACTGCGCCACAA...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTAAGAAACAAAAGGAAGCACCATGCTGAACCAGTCTCCAAGTCCAGACTCTGGTGTTCGAAGTaGACAATCCTGAGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: FSLRNKRKHHAEPVSKSRLWCSK*TILSHT Trigger: TGTATGGCTCAGGATTGTCCACTTCGAACACCAGAG...TCTGGACTTGGAGACTGGTTCAGCATGGTGCTTCCTTTTGTTTCTTAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| 3UTR CAA 72 bp | GAACACAAGACAGTGACCCAGGTCAGAGTACACCACTaGAATACTGGATCAAAAGGAACAACCAAGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EHKTVTQVRVHH*NTGSKGTTKEK Trigger: TTTTTCCTTGGTTGTTCCTTTTGATCCAGTATTCAAGTGGTGTACTCTGACCTGGGTCACTGTCTTGTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR GCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAAACAAGCACTGAGCAATaGTGTTCCCAACAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALCYLCFASFLYNRTTFETSTEQ*CSQQLR Trigger: CCGAAGCTGTTGGGAACAGCATTGCTCAGTGCTTGT...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
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| CDS-3UTR TCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAAATCCTGAGCCATACATaGGATTCCTACACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ALCYLCFASFLYNRTTFEILSHT*DSYTNT Trigger: GGTGTTGGTGTAGGAATCTCATGTATGGCTCAGGAT...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR TCA 90 bp | GCTCTGTGTTATCTATGCTTTGCCTCTTTCCTTTATAATCGTACAACCTTTGAACCAGCAGAAGTCATGTaGTTACAGCCTCCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALCYLCFASFLYNRTTFEPAEVM*LQPPFF Trigger: GAAGAATGGAGGCTGTAATCACATGACTTCTGCTGG...TTCAAAGGTTGTACGATTATAAAGGAAAGAGGCAAAGCATAGATAACACAGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
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| CDS-3UTR CAA 90 bp | GCACCTTCCCCAGGACTCCGGCTCCAGTCAAACATGATGCTGGAAAGCAGGGGCCCTCTTCCTCACAGTTaGGGTCATAGTCCTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: APSPGLRLQSNMMLESRGPLPHS*GHSPLH Trigger: ATGAAGAGGACTATGACCCAAACTGTGAGGAAGAGG...GCCCCTGCTTTCCAGCATCATGTTTGACTGGAGCCGGAGTCCTGGGGAAGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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| CDS-3UTR CAA 90 bp | AGGACACCAGGCAAGCTGCCTGTTCCCTTGCACTTGACTGTGCAAGAACTGGTCAGGGTATATCGACACTaGGCTAAGAGCTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTPGKLPVPLHLTVQELVRVYRH*AKSLAA Trigger: TGCTGCCAAGCTCTTAGCCAAGTGTCGATATACCCT...GACCAGTTCTTGCACAGTCAAGTGCAAGGGAACAGGCAGCTTGCCTGGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR CAA 90 bp | CCTCACCCCGGCACAGCCACAGCCCAGTTTAGGTGTCGTGAAAATCCTTTAGCAACACCAACACCATCTTaGACAAGCACTGAGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPGTATAQFRCRENPLATPTPS*TSTEQC Trigger: GCATTGCTCAGTGCTTGTCAAAGATGGTGTTGGTGT...TGCTAAAGGATTTTCACGACACCTAAACTGGGCTGTGGCTGTGCCGGGGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193190.6 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGGGAAATGTAAAGTCCTCATTAGAGGCCAGCTCAACGCGGCCTCTACCCCTCTTCCTCACAGTTaGGGTCATAGTCCTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQGKCKVLIRGQLNAASTPLPHS*GHSPLH Trigger: ATGAAGAGGACTATGACCCAAACTGTGAGGAAGAGG...GGTAGAGGCCGCGTTGAGCTGGCCTCTAATGAGGACTTTACATTTCCCCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013338.14 ENSMUST00000193190.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTCTTCTGGCCAGCCCCTTCTAGTACAGGAACTGAGACCACAAACCAGGTACATCTGTCGACACTaGAAACAGAAGACCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLSSGQPLLVQELRPQTRYICRH*KQKTSL Trigger: CAGCGAGGTCTTCTGTTTCAAGTGTCGACAGATGTA...CCTGGTTTGTGGTCTCAGTTCCTGTACTAGAAGGGGCTGGCCAGAAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR CAA 90 bp | CCACTGGCAGGACTTGATGGAAAGGTCTGTGTGCTAACAGAGCATCACAGCCACCTTACACTTGGAGCATaGCATGTGATTACAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLAGLDGKVCVLTEHHSHLTLGA*HVITAS Trigger: GGAGGCTGTAATCACATGCAATGCTCCAAGTGTAAG...GTGGCTGTGATGCTCTGTTAGCACACAGACCTTTCCATCAAGTCCTGCCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
||
| CDS-3UTR CAA 90 bp | GTCAAGTATAGACAGCTCTGCCAGTCTCAGAGGGGAGGCACTGAACAAAGCCATACACCAACACCATCTTaGACAAGCACTGAGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VKYRQLCQSQRGGTEQSHTPTPS*TSTEQC Trigger: GCATTGCTCAGTGCTTGTCAAAGATGGTGTTGGTGT...ATGGCTTTGTTCAGTGCCTCCCCTCTGAGACTGGCAGAGCTGTCTATACTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013338.14 |
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