Pregenerated sensors for ARIH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025234Ensembl transcript IDs: ENSMUST00000026264.12, ENSMUST00000165322.2, ENSMUST00000171856.2, ENSMUST00000171975.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCGAGATGTGATGGGAAGCCTAGAAAGCCTACGGCAGGCAGTGTaGGTGGTGTGGGCACACAGGCTGGAATGGGGGCGTCAAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PRDVMGSLESLRQAV*VVWAHRLEWGRQGH Trigger: GTGGCCTTGACGCCCCCATTCCAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCTTCCCATCACATCTCGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CCA 90 bp | AGCCTACGGCAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGGAATaGGGGCGTCAAGGCCACAGAGGAGTAGGCTGGGATAGGATCATT | + |
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Preference number: 1 (lower is better) Translates to: SLRQAVCVVWAHRLE*GRQGHRGVGWDRII Trigger: AATGATCCTATCCCAGCCTACTCCTCTGTGGCCTTGACGCCCCCATTCCAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR GCA 90 bp | GTGGCACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTaGACCTCGATCCAGGACATGTTGTGCTGCTGCATCTCCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: VARHWQRTSTAFFRN*TSIQDMLCCCISSI Trigger: GATGGAGGAGATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR TCA 90 bp | CAGGACATGTTGTGCTGCTGCATCTCCTCCATCTTCTGTTTCACCTaGGCATACAGCTTATGCTCGAAGCGTAGACTCTGCATGTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: QDMLCCCISSIFCFT*AYSLCSKRRLCMWF Trigger: GAACCACATGCAGAGTCTACGCTTCGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGATGGAGGAGATGCAGCAGCACAACATGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171856.2 |
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| 3UTR GCA 90 bp | ATAAGTGTACATGAGTGTGGCACGACACTGGCAGAGGACATCAACTaGTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ISVHECGTTLAEDIN*FLQELHLDPGHVVL Trigger: CAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACTCATGTACACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR GCA 90 bp | AGAGACTTGGGTAGGTCAAATAGGGAAGCTGTTAACAATATGGCTTaGCTGTCCCAGCTGGGAGCACTGAAGCTAGCTACTGACAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RDLGRSNREAVNNMA*LSQLGALKLATDKG Trigger: GCCTTTGTCAGTAGCTAGCTTCAGTGCTCCCAGCTGGGACAGGCAAGCCATATTGTTAACAGCTTCCCTATTTGACCTACCCAAGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR TCA 90 bp | CAATATGGCTTGCCTGTCCCAGCTGGGAGCACTGAAGCTAGCTACTaGCAAAGGCAGGTAAATTCTGGAAATGCTGTCAGATATGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: QYGLPVPAGSTEASY*QRQVNSGNAVRYGD Trigger: GTCTCCATATCTGACAGCATTTCCAGAATTTACCTGCCTTTGTCAGTAGCTAGCTTCAGTGCTCCCAGCTGGGACAGGCAAGCCATATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR GCA 90 bp | GGCAGGACAATCCTGGATGAAGCAGTAACCCTCTCAAAGGGGCACTaGTGGGCATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GRTILDEAVTLSKGH*WALQLTKNAKSHFF Trigger: GAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAATGCCCAGCAGTGCCCCTTTGAGAGGGTTACTGCTTCATCCAGGATTGTCCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CCA 90 bp | CCTAACTTAGGCAAAAAGCCAGAGGAAAGTGAGCCTACTTCCCAATaGAGTAATAAGATGTACACTGCAAGAGCAGGCACGGCTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PNLGKKPEESEPTSQ*SNKMYTARAGTAAS Trigger: TGAGGCAGCCGTGCCTGCTCTTGCAGTGTACATCTTATTACTCCATTGGGAAGTAGGCTCACTTTCCTCTGGCTTTTTGCCTAAGTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CCA 90 bp | CTCCTACCACACTCTCCAATTGCAGTAATAAATGCTGAGATCCTATaGTTACATGCTAAGCTGGACTTAGTGGCACATGCCTGTCATCCT | + |
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Preference number: 1 (lower is better) Translates to: LLPHSPIAVINAEIL*LHAKLDLVAHACHP Trigger: AGGATGACAGGCATGTGCCACTAAGTCCAGCTTAGCATGTAACCATAGGATCTCAGCATTTATTACTGCAATTGGAGAGTGTGGTAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR GCA 90 bp | CCTACTCAAATGTACTGGATGGGAGTATCATGTTCTAGTGGTGTTTaGCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PTQMYWMGVSCSSGV*LQTEPTATHTSNFS Trigger: ACTGAAATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACCACTAGAACATGATACTCCCATCCAGTACATTTGAGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CCA 90 bp | TGCTGGGCATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTaGTTCTGGATGCTACGTCATTCTGAGACCAGAATAAGAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: CWALQLTKNAKSHFF*FWMLRHSETRIRKL Trigger: CAGTTTTCTTATTCTGGTCTCAGAATGACGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAATGCCCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CCA 90 bp | GCATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTaGATGCTACGTCATTCTGAGACCAGAATAAGAAAACTGTACAGA | + |
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Preference number: 1 (lower is better) Translates to: ALQLTKNAKSHFFWF*MLRHSETRIRKLYR Trigger: TCTGTACAGTTTTCTTATTCTGGTCTCAGAATGACGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR TCA 90 bp | ACAATTCTGGTCGCTTTTCAAAGTCACCAGGAAAAGGAACTTACTTaGGCTTTCTTTGAAATCTCCTTGGTGTTGATAAAGGTCTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: TILVAFQSHQEKELT*AFFEISLVLIKVLR Trigger: TCTTAAGACCTTTATCAACACCAAGGAGATTTCAAAGAAAGCTCAAGTAAGTTCCTTTTCCTGGTGACTTTGAAAAGCGACCAGAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR TCA 90 bp | CACATTGACTTCCAAGTGAGAGCTTCTAGGTTGGTTAATTCAGCTTaGAAAACTAACAGATGCACATTCTTTAAAATATGTACCAACTTC | + |
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Preference number: 1 (lower is better) Translates to: HIDFQVRASRLVNSA*KTNRCTFFKICTNF Trigger: GAAGTTGGTACATATTTTAAAGAATGTGCATCTGTTAGTTTTTCAAGCTGAATTAACCAACCTAGAAGCTCTCACTTGGAAGTCAATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCCTAGAAAGCCTACGGCAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGCATTTGCTTAGAATGTaGCTTCCTGGATCTAGATCC | + |
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Preference number: 2 (lower is better) Translates to: GSLESLRQAVCVVWAHRLHLLRM*LPGSRS Trigger: GGATCTAGATCCAGGAAGTCACATTCTAAGCAAATG...CAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCTGCATCTCCTCCATCATCCAGGACATGTTGTaGTGCTGCATCTCCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: FRNCTSIQDMLCCCISSIIQDML*CCISSI Trigger: GATGGAGGAGATGCAGCAGCACAACATGTCCTGGAT...GATGGAGGAGATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTGGCAGGCAGTGTGCGTaGTGTGGGCACACAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSDMETVVKNLDVAEEPVGRQCA*CGHTGW Trigger: CCAGCCTGTGTGCCCACACCACGCACACTGCCTGCC...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCGGGTATGAGAGAAAGTaGATCCAACTGTGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DFLDLDPEAENSRHEAHGGYERK*IQLCVE Trigger: CTCCACACACAGTTGGATTCACTTTCTCTCATACCC...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAGAAAGCGAAGACATAAGTGTACATGAGTGTGGCACGACACTGGCAGAGAGTGTGGCACGACACTaGCAGAGGACATCAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: EVESEDISVHECGTTLAESVARH*QRTSTA Trigger: AGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACT...CTCTGCCAGTGTCGTGCCACACTCATGTACACTTATGTCTTCGCTTTCTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTGCACACAGGCTGGAATaGGGGCGTCAAGGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LSDMETVVKNLDVAEEPVAHRLE*GRQGHR Trigger: TCTGTGGCCTTGACGCCCCCATTCCAGCCTGTGTGC...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR CCA 90 bp | ATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTACGGCAGTGTGCGTGGTGTaGGCACACAGGCTGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: ITVDKECKKPLLLVLDATAVCVV*AHRLEW Trigger: CCATTCCAGCCTGTGTGCCCACACCACGCACACTGC...CGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCATCATTATTCACTCATaGCCTGAGGGTATGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: DFLDLDPEAENSRHEAHGIIIHS*PEGMRE Trigger: TTCTCTCATACCCTCAGGTCATGAGTGAATAATGAT...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGCTACGGCAGGCAGTGTaGGTGGTGTGGGCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMLRQAV*VVWAHR Trigger: CCTGTGTGCCCACACCACGCACACTGCCTGCCGTAG...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CAA 90 bp | GATGAAGCAGTAACCCTCTCAAAGGGGCACTGCTGGGCATTACAGTaGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTA | + |
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Preference number: 2 (lower is better) Translates to: DEAVTLSKGHCWALQ*TKNAKSHFFWFWML Trigger: TAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAATGCCCAGCAGTGCCCCTTTGAGAGGGTTACTGCTTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTCCCACAGATCTGCAGAGGACATCAACTaGTTTCTTCAGGAACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: RVHFMQGQSQSSMYSHRSAEDIN*FLQELH Trigger: GTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGC...AGATCTGTGGGAGTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| 3UTR-3UTR CCA 90 bp | GGTAAAGTTTTCAGAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACAGTGTGGCACGACACTaGCAGAGGACATCAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: GKVFRVHFMQGQSQSSMYSVARH*QRTSTA Trigger: AGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACT...GTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTCTGAAAACTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| 3UTR-3UTR TCA 90 bp | TCATGCACATGCTGTAACAAAACCCTTCGTCGACTCTCACAGTATCTGTACTTAAGACATAAGTGTACATaGGTGTGGCACGACACTGGC | + |
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Preference number: 2 (lower is better) Translates to: SCTCCNKTLRRLSQYLYLRHKCT*VWHDTG Trigger: GCCAGTGTCGTGCCACACTCATGTACACTTATGTCT...TAAGTACAGATACTGTGAGAGTCGACGAAGGGTTTTGTTACAGCATGTGCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTAAGAGCAGGCACGGCTaGCTCACAAATGGTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: LSDMETVVKNLDVAEEPVKSRHG*LTNGKH Trigger: GTGTTTACCATTTGTGAGGCAGCCGTGCCTGCTCTT...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | AAATATCTCGTTCAAGGTAGCCCGAAAGCACCTCTGTGGCATTTTCTAGATCTGATCTTCTGTTTCACCTaGGCATACAGCTTATGCTCG | + |
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Preference number: 2 (lower is better) Translates to: KYLVQGSPKAPLWHFLDLIFCFT*AYSLCS Trigger: CGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGAT...CAGATCTAGAAAATGCCACAGAGGTGCTTTCGGGCTACCTTGAACGAGATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATTTGCTTAGAATGTGACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTCATGACCTGAGGGTATaGGAGAAAGTGAATCCAACT | + |
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Preference number: 2 (lower is better) Translates to: GICLECDFLDLDPEAENSHDLRV*EKVNPT Trigger: AGTTGGATTCACTTTCTCTCATACCCTCAGGTCATG...AGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTCACATTCTAAGCAAATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR CAA 90 bp | TCTGTACTTATCTTGGACTTTCTGCTTTATATCTTGCAGAGAATCTaGGGAAATATCTCGTTCAAGGTAGCCCGAAAGCACCTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SVLILDFLLYILQRI*GNISFKVARKHLCG Trigger: GCCACAGAGGTGCTTTCGGGCTACCTTGAACGAGATATTTCCCAAGATTCTCTGCAAGATATAAAGCAGAAAGTCCAAGATAAGTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| 3UTR-3UTR TCA 90 bp | GGTAAAGTTTTCAGAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACATCTTCTGTTTCACCTaGGCATACAGCTTATGCTCG | + |
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Preference number: 2 (lower is better) Translates to: GKVFRVHFMQGQSQSSMYIFCFT*AYSLCS Trigger: CGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGAT...GTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTCTGAAAACTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| 3UTR-3UTR TCA 90 bp | ATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTACGTTGCAGGGCAGAGCATaGAGAGAACTTATGACACTC | + |
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Preference number: 2 (lower is better) Translates to: ITVDKECKKPLLLVLDATLQGRA*RELMTL Trigger: GAGTGTCATAAGTTCTCTTCATGCTCTGCCCTGCAA...CGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGACTGGTTATTCTTTTTGAGGTAGAAAGCGAAGACATAAGTGTACATGAGAGACATAAGTGTACATaGGTGTGGCACGACACTGGC | + |
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Preference number: 2 (lower is better) Translates to: NGLVILFEVESEDISVHERHKCT*VWHDTG Trigger: GCCAGTGTCGTGCCACACTCATGTACACTTATGTCT...CTCATGTACACTTATGTCTTCGCTTTCTACCTCAAAAAGAATAACCAGTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTCGTTCAAGGTAGCCCGAAAGCACCTCTGTGGCATTTTCTAGATCTGCTTACTGGTTATTCTTTTTaGGGTAGAAAGCGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: YLVQGSPKAPLWHFLDLLTGYSF*GRKRRH Trigger: ATGTCTTCGCTTTCTACCTCAAAAAGAATAACCAGT...AAGCAGATCTAGAAAATGCCACAGAGGTGCTTTCGGGCTACCTTGAACGAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGGGGATGCTGACCTGTTaGAAAATACCACAGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLGMLTC*KIPQAE Trigger: TTCTGCCTGTGGTATTTTTCAACAGGTCAGCATCCC...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR GCA 90 bp | AATGGACTGGTTATTCTTTTTGAGGTAGAAAGCGAAGACATAAGTGTACATGAGGCTTTCTTCAGGAACTaGACCTCGATCCAGGACATG | + |
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Preference number: 2 (lower is better) Translates to: NGLVILFEVESEDISVHEAFFRN*TSIQDM Trigger: CATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGC...CTCATGTACACTTATGTCTTCGCTTTCTACCTCAAAAAGAATAACCAGTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTCACACAAATTGTGAGTaGAATATCCTCAGGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSDMETVVKNLDVAEEPVHTNCE*NILRSH Trigger: ATGGGACCTGAGGATATTGCACTCACAATTTGTGTG...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR CCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGGAATCCAACTGTGTGTaGAGGTGTGTATGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMESNCV*RCVCAG Trigger: CCCTGCACATACACACCTCCACACACAGTTGGATTC...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGAGGAAAGCTCTAAATTaGAGGTCAGCCTGGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLRKALN*RSAWAT Trigger: TGTAGCCCAGGCTGACCTCCAATTTAGAGCTTTCCT...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTACATTCACTGATTTCTaGTGGGAAAAGAACAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSDMETVVKNLDVAEEPVTFTDF*WEKNSC Trigger: GCAACTGTTCTTTTCCCATCAGAAATCAGTGAATGT...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTCTCAAATGTACTGGATaGGAGTATCATGTTCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSDMETVVKNLDVAEEPVLKCTG*EYHVLV Trigger: CACTAGAACATGATACTCCCATCCAGTACATTTGAG...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR CCA 90 bp | ATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTACGCCTACTCAAATGTACTaGATGGGAGTATCATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ITVDKECKKPLLLVLDATPTQMY*MGVSCS Trigger: AGAACATGATACTCCCATCCAGTACATTTGAGTAGG...CGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGGATGCTACGTCATTCTaGGACCAGAATAAGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLDATSF*DQNKKT Trigger: AGTTTTCTTATTCTGGTCTCAGAATGACGTAGCATC...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAACAATTTAAAGTCAATGTTCAAGAGGCAGAAACCAGAAAGCTTTCAGTGTTCTAGTGGTGTTTaGCTTCAAACTGAACCCACC | + |
|
Preference number: 2 (lower is better) Translates to: TNNNLKSMFKRQKPESFQCSSGV*LQTEPT Trigger: GGTGGGTTCAGTTTGAAGGCAAACACCACTAGAACA...CTGAAAGCTTTCTGGTTTCTGCCTCTTGAACATTGACTTTAAATTGTTGTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGCAAAAGATTAGCAGCTaGTCTGTGCATTTTCAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMQKISS*SVHFQR Trigger: TCGCTGAAAATGCACAGAGCAGCTGCTAATCTTTTG...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGAGCCAAACTAAATGTTaGGAATGGTCTCATTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLSQTKC*EWSHSQ Trigger: CTGTGAATGAGACCATTCCCAACATTTAGTTTGGCT...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGCCACATATATCTATGTaGCAATTCTGGTCGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMPHISM*QFWSLF Trigger: GAAAAGCGACCAGAATTGTCACATAGATATATGTGG...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGAATAGTTTTACCTCTTaGTCTAGTTGCCTAGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMNSFTS*SSCLVH Trigger: GTGAACTAGGCAACTAGATCAAGAGGTAAAACTATT...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGCTATGGTATGTCTCCTaGGCTTTGGATCAAAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMLWYVS*ALDQNF Trigger: AAAATTTTGATCCAAAGCTCAGGAGACATACCATAG...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAACAACAATTTAAAGTCAATGTTCAAGAGGCAGAAACCAGAAAGCTTTCAGTCAGCAAACATTCACTaGTTTCTGATGGGAAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TNNNLKSMFKRQKPESFQSANIH*FLMGKE Trigger: TTCTTTTCCCATCAGAAATCAGTGAATGTTTGCTGA...CTGAAAGCTTTCTGGTTTCTGCCTCTTGAACATTGACTTTAAATTGTTGTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR CCA 72 bp | AGCCTAGAAAGCCTACGGCAGGCAGTGTGCGTGGTGTaGGCACACAGGCTGGAATGGGGGCGTCAAGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLESLRQAVCVV*AHRLEWGRQGH Trigger: GTGGCCTTGACGCCCCCATTCCAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR GCA 72 bp | GTGATGGGAAGCCTAGAAAGCCTACGGCAGGCAGTGTaGGTGGTGTGGGCACACAGGCTGGAATGGGGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: VMGSLESLRQAV*VVWAHRLEWGR Trigger: ACGCCCCCATTCCAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCTTCCCATCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | AAGGCTGGTTTCTCGGAGAGGCAGGACAATCCTGGATaGAGCAGTAACCCTCTCAAAGGGGCACTGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KAGFSERQDNPG*SSNPLKGALLG Trigger: GCCCAGCAGTGCCCCTTTGAGAGGGTTACTGCTTCATCCAGGATTGTCCTGCCTCTCCGAGAAACCAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCTGCATCTCCTCCATCTCGATCCAGGACATGTaGTGCTGCTGCATCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FRNCTSIQDMLCCCISSISIQDM*CCCISS Trigger: GGAGGAGATGCAGCAGCACAACATGTCCTGGATCGA...GATGGAGGAGATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
||
| 3UTR GCA 72 bp | CACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTaGACCTCGATCCAGGACATGTTGTGCTGCTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: HWQRTSTAFFRN*TSIQDMLCCCI Trigger: GATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
||
| 3UTR GCA 72 bp | CATGAGTGTGGCACGACACTGGCAGAGGACATCAACTaGTTTCTTCAGGAACTGCACCTCGATCCAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: HECGTTLAEDIN*FLQELHLDPGH Trigger: ATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
||
| 3UTR CCA 72 bp | CTGGAATGGGGGCGTCAAGGCCACAGAGGAGTAGGCTaGGATAGGATCATTCATGAACTGAAGCAACTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LEWGRQGHRGVG*DRIIHELKQLN Trigger: GTTTAGTTGCTTCAGTTCATGAATGATCCTATCCCAGCCTACTCCTCTGTGGCCTTGACGCCCCCATTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | TTGTGCTGCTGCATCTCCTCCATCTTCTGTTTCACCTaGGCATACAGCTTATGCTCGAAGCGTAGACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LCCCISSIFCFT*AYSLCSKRRLC Trigger: GCAGAGTCTACGCTTCGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGATGGAGGAGATGCAGCAGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171856.2 |
||
| 3UTR TCA 72 bp | TTGCCTGTCCCAGCTGGGAGCACTGAAGCTAGCTACTaGCAAAGGCAGGTAAATTCTGGAAATGCTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPVPAGSTEASY*QRQVNSGNAVR Trigger: TCTGACAGCATTTCCAGAATTTACCTGCCTTTGTCAGTAGCTAGCTTCAGTGCTCCCAGCTGGGACAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR GCA 72 bp | GGTAGGTCAAATAGGGAAGCTGTTAACAATATGGCTTaGCTGTCCCAGCTGGGAGCACTGAAGCTAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: GRSNREAVNNMA*LSQLGALKLAT Trigger: AGTAGCTAGCTTCAGTGCTCCCAGCTGGGACAGGCAAGCCATATTGTTAACAGCTTCCCTATTTGACCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR CCA 72 bp | GGCAAAAAGCCAGAGGAAAGTGAGCCTACTTCCCAATaGAGTAATAAGATGTACACTGCAAGAGCAGGCACG | + |
|
Preference number: 3 (lower is better) Translates to: GKKPEESEPTSQ*SNKMYTARAGT Trigger: CGTGCCTGCTCTTGCAGTGTACATCTTATTACTCCATTGGGAAGTAGGCTCACTTTCCTCTGGCTTTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR GCA 72 bp | AAGAGCCAGTTCCCCTTGATCCACACAAATTGTGAGTaGAATATCCTCAGGTCCCATGTGGGACTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSQFPLIHTNCE*NILRSHVGLES Trigger: ACTTTCTAGTCCCACATGGGACCTGAGGATATTGCACTCACAATTTGTGTGGATCAAGGGGAACTGGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR GCA 72 bp | ATCCTGGATGAAGCAGTAACCCTCTCAAAGGGGCACTaGTGGGCATTACAGTTGACAAAGAATGCAAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILDEAVTLSKGH*WALQLTKNAKS Trigger: GCTTTTTGCATTCTTTGTCAACTGTAATGCCCAGCAGTGCCCCTTTGAGAGGGTTACTGCTTCATCCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | AAACCCTTTAACAGGCCGAGGCATTTGCTTAGAATGTaGCTTCCTGGATCTAGATCCAGAAGCGGAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: KPFNRPRHLLRM*LPGSRSRSGEF Trigger: GAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTCACATTCTAAGCAAATGCCTCGGCCTGTTAAAGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | GACGCTTGTTGCAGGGCAGAGCATGAAGAGAACTTATaGCACTCAGACCTAGATACTGTGAAGTCAACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DACCRAEHEENL*HSDLDTVKSTL Trigger: AAGAGTTGACTTCACAGTATCTAGGTCTGAGTGTCATAAGTTCTCTTCATGCTCTGCCCTGCAACAAGCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR GCA 72 bp | ATGTACTGGATGGGAGTATCATGTTCTAGTGGTGTTTaGCTTCAAACTGAACCCACCGCAACACACACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MYWMGVSCSSGV*LQTEPTATHTS Trigger: ACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACCACTAGAACATGATACTCCCATCCAGTACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGGAGGAAAGCTCTAAATaGGAGGTCAGCCTGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLEESSK*EVSLGY Trigger: GTAGCCCAGGCTGACCTCCAATTTAGAGCTTTCCTC...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATTTGCTTAGAATGTGACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTCGGCCTAGAATACTGTaGTACAATGGTTTATCTACC | + |
|
Preference number: 3 (lower is better) Translates to: GICLECDFLDLDPEAENSRPRIL*YNGLST Trigger: GGTAGATAAACCATTGTACAACAGTATTCTAGGCCG...AGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTCACATTCTAAGCAAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | ATGGAAAAGCAGACACTTGACTTCAGATTTGCCACCTaGGGTGACAAGGAAAGGGAAGAAAAAGATACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MEKQTLDFRFAT*GDKEREEKDTS Trigger: ACTTGTATCTTTTTCTTCCCTTTCCTTGTCACCTCAGGTGGCAAATCTGAAGTCAAGTGTCTGCTTTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGTGGAAAAGCAGACACTaGACTTCAGATTTGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMWKSRH*TSDLPP Trigger: AGGTGGCAAATCTGAAGTCAAGTGTCTGCTTTTCCA...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR CCA 72 bp | TCTGAGACCAGAATAAGAAAACTGTACAGAGGTAGTTaGATATCACTCTGGTCTCAGATAGAAGACATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SETRIRKLYRGS*ISLWSQIEDIV Trigger: CACAATGTCTTCTATCTGAGACCAGAGTGATATCCAACTACCTCTGTACAGTTTTCTTATTCTGGTCTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR CCA 72 bp | TTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTaGTTCTGGATGCTACGTCATTCTGAGACCAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: LQLTKNAKSHFF*FWMLRHSETRI Trigger: TATTCTGGTCTCAGAATGACGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | TGGAAAGGGACAGGCCAACAACTGCAAATACCCTATTaGATTACACCAAGCTATTTATTTTCGAGTGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: WKGTGQQLQIPY*ITPSYLFSSVT Trigger: AGTTACACTCGAAAATAAATAGCTTGGTGTAATTCAATAGGGTATTTGCAGTTGTTGGCCTGTCCCTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR CCA 72 bp | TTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTaGATGCTACGTCATTCTGAGACCAGAATAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTKNAKSHFFWF*MLRHSETRIRK Trigger: TTTTCTTATTCTGGTCTCAGAATGACGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | AAAAGATACAAGTTGATCCTAAAGCGACAAGTGGTTTaGGGAAGCAGCATAATATACTCAGCAAACATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KRYKLILKRQVV*GSSIIYSANIH Trigger: GTGAATGTTTGCTGAGTATATTATGCTGCTTCCTCAAACCACTTGTCGCTTTAGGATCAACTTGTATCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAACAACAATTTAAAGTCAATGTTCAAGAGGCAGAAACCAGAAAGCTTTCAGCAGTCTTGGATCTATTaGTGTGTATGTATACACGTG | + |
|
Preference number: 3 (lower is better) Translates to: TNNNLKSMFKRQKPESFQQSWIY*CVCIHV Trigger: CACGTGTATACATACACACAAATAGATCCAAGACTG...CTGAAAGCTTTCTGGTTTCTGCCTCTTGAACATTGACTTTAAATTGTTGTTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | TCTTCTTGTTCTAAATTTCAAGTCCTACTTAACAGGTaGACCACACATTACACTGCAGATTCAACCATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSCSKFQVLLNR*TTHYTADSTIS Trigger: TGAAATGGTTGAATCTGCAGTGTAATGTGTGGTTCACCTGTTAAGTAGGACTTGAAATTTAGAACAAGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | AATTCAGCTAATAGGTGCAGTCTAACCCTATTTACCTaGCTTGTATATATGCTTTTGAGTTTGGTATCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: NSANRCSLTLFT*LVYMLLSLVSL Trigger: TAGGGATACCAAACTCAAAAGCATATATACAAGTCAGGTAAATAGGGTTAGACTGCACCTATTAGCTGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR TCA 72 bp | AAGTTGTCTTTATTCTTAGTCACATTGACTTCCAAGTaGGAGCTTCTAGGTTGGTTAATTCAGCTTGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLSLFLVTLTSK*ELLGWLIQLEK Trigger: TTTTTCAAGCTGAATTAACCAACCTAGAAGCTCTCACTTGGAAGTCAATGTGACTAAGAATAAAGACAACTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGGAATGGGGGCGTCAAGGCCACGGACACGAAATAGTCTaGCCCATGCCTTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QAVCVVWAHRLEWGRQGHGHEIV*PMPSSI Trigger: AATGGAGGAAGGCATGGGGCAGACTATTTCGTGTCC...GTGGCCTTGACGCCCCCATTCCAGCCTGTGTGCCCACACCACGCACACTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGGAATGGGGGCGTCAAGGCCACATAGTTGCTGGATTCTaGATGACCTCGTTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAVCVVWAHRLEWGRQGHIVAGF*MTSLTS Trigger: GGAGGTCAACGAGGTCATCCAGAATCCAGCAACTAT...GTGGCCTTGACGCCCCCATTCCAGCCTGTGTGCCCACACCACGCACACTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCTAGAAAGCCTACGGCAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGGCTTTCTTCAGGAACTaGACCTCGATCCAGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: GSLESLRQAVCVVWAHRLAFFRN*TSIQDM Trigger: CATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGC...CAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCTGCATCTCCTCCTCGCAGGCAGATCCATaGGGTTCCCAAGGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFRNCTSIQDMLCCCISSSQADP*GSQGPR Trigger: TCTTGGCCCTTGGGAACCGCATGGATCTGCCTGCGA...GGAGGAGATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171856.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCTAGAAAGCCTACGGCAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGACATTTGCAGCGAACTaGTTTTGCATCAGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLESLRQAVCVVWAHRLTFAAN*FCIRIL Trigger: CAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGT...CAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCTGCATCCATTCCACCATGTGCTaGAGGATCTGTTCGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAFFRNCTSIQDMLCCCIHSTMC*RICSAV Trigger: CACGGCCGAACAGATCCTGCAGCACATGGTGGAATG...GATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | ACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCATACCAGGCAGATCCATaGGGTTCCCAAGGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTLAEDINCFLQELHLDPYQADP*GSQGPR Trigger: TCTTGGCCCTTGGGAACCGCATGGATCTGCCTGGTA...TGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | TGGCACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTGCACCTCGAATACATTCCACCATGTaGTGCAGGATCTGTTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WHDTGRGHQLLSSGTAPRIHSTM*CRICSA Trigger: GGCCGAACAGATCCTGCAGCACATGGTGGAATGTAT...TCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCATACATTCCACCATGTaGTGCAGGATCTGTTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFLDLDPEAENSRHEAHGIHSTM*CRICSA Trigger: GGCCGAACAGATCCTGCAGCACATGGTGGAATGTAT...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTCCCACAGATCTTGGATCTGTTCGGCCGTaGGCACCTCGTAGCGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EFILCRASLSPQCTPTDLGSVRP*APRSGN Trigger: ATTACCGCTACGAGGTGCTCACGGCCGAACAGATCC...AAGATCTGTGGGAGTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCTTACGACAGACCATGTaGTTACAACCGCCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFLDLDPEAENSRHEAHGLRQTM*LQPPSF Trigger: GAAGGATGGCGGTTGTAATCACATGGTCTGTCGTAA...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | CACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCATAGTTGCTGGATTCTaGATGACCTCGTTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HDTGRGHQLLSSGTAPRSIVAGF*MTSLTS Trigger: GGAGGTCAACGAGGTCATCCAGAATCCAGCAACTAT...GGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CCA 90 bp | AGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCTGCATCTCCTCCATCTTCACTTTAACAACATGGTaGCAATCTGGGGCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RNCTSIQDMLCCCISSIFTLTTW*QSGAGH Trigger: GTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGT...GAAGATGGAGGAGATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CCA 90 bp | GACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGGGGACATTCCAAAACTaGCGGCCACATTTGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: DINCFLQELHLDPGHVVLGTFQN*RPHLQR Trigger: TCGCTGCAAATGTGGCCGCCAGTTTTGGAATGTCCC...CAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR TCA 90 bp | GTTCTAGTGGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTGGATCTGTTCGGCCGTaGGCACCTCGTAGCGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVVFAFKLNPPQHTQVIGSVRP*APRSGN Trigger: ATTACCGCTACGAGGTGCTCACGGCCGAACAGATCC...AATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACCACTAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGGGACACGAAATAGTCTaGCCCATGCCTTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DINCFLQELHLDPGHVVLGHEIV*PMPSSI Trigger: AATGGAGGAAGGCATGGGGCAGACTATTTCGTGTCC...CAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR TCA 90 bp | TGGCACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTGCACCTCGACATCCTTCTCAATTGTaGCATGGCATTTGGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: WHDTGRGHQLLSSGTAPRHPSQL*HGIWDI Trigger: AATGTCCCAAATGCCATGTCACAATTGAGAAGGATG...TCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGTGGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTACCAGGCAGATCCATaGGGTTCCCAAGGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLVVFAFKLNPPQHTQVIYQADP*GSQGPR Trigger: TCTTGGCCCTTGGGAACCGCATGGATCTGCCTGGTA...AATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACCACTAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAATATCTCGTTCAAGGTAGCCCGAAAGCACCTCTGTGGCATTTTCTACATATCCTGTGCCGATaGCCTTGTATTCATCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGKYLVQGSPKAPLWHFLHILCR*PCIHLA Trigger: CGCCAGATGAATACAAGGTCATCGGCACAGGATATG...TAGAAAATGCCACAGAGGTGCTTTCGGGCTACCTTGAACGAGATATTTCCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | ACCTCGATCCAGGACATGTTGTGCTGCTGCATCTCCTCCATCTTCTGTTTCACCAAGATATCACAACCATaGGCAGGACACGAAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSIQDMLCCCISSIFCFTKISQP*AGHEIV Trigger: GACTATTTCGTGTCCTGCGCATGGTTGTGATATCTT...GGTGAAACAGAAGATGGAGGAGATGCAGCAGCACAACATGTCCTGGATCGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGTAGAAAGCGAAGACATAAGTGTACATGAGTGTGGCACGACACTGGCAACTGGCGGCCACATTTaGAGCGAACTGGTTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FEVESEDISVHECGTTLATGGHI*SELVLH Trigger: ATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGT...TGCCAGTGTCGTGCCACACTCATGTACACTTATGTCTTCGCTTTCTACCTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCATCTCCTCCATCTTCTGTTTCACCTGAGCATACAGCTTATGCTCGATTGGGCATCTCTTGCTaGCTTTGCATCATCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: AAASPPSSVSPEHTAYARLGISC*LCIILI Trigger: AATGAGGATGATGCAAAGGCAGCAAGAGATGCCCAA...TCGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGATGGAGGAGATGCAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR TCA 90 bp | GTTCTAGTGGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTAGACATAAGTGTACATaGGTGTGGCACGACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVVFAFKLNPPQHTQVIRHKCT*VWHDTG Trigger: GCCAGTGTCGTGCCACACTCATGTACACTTATGTCT...AATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACCACTAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | ATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTACGCATTCCACCATGTGCTaGAGGATCTGTTCGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITVDKECKKPLLLVLDATHSTMC*RICSAV Trigger: CACGGCCGAACAGATCCTGCAGCACATGGTGGAATG...CGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTCAGTATCCAGGACATGTTGTGCTaGTGCATCTCCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVCLQTEPTATHTSNFSIQDMLC*CISSIF Trigger: GAAGATGGAGGAGATGCAGCAGCACAACATGTCCTG...GATACTGAAATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTCAGTATCATCCAGGACATGTTGTaGTGCTGCATCTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GVCLQTEPTATHTSNFSIIQDML*CCISSI Trigger: GATGGAGGAGATGCAGCAGCACAACATGTCCTGGAT...GATACTGAAATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTCCCACAGATCTTTGGACTTTAACAACATaGTGGCAATCTGGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFILCRASLSPQCTPTDLWTLTT*WQSGAG Trigger: TCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCA...AAGATCTGTGGGAGTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CCA 90 bp | ACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCATTTGCATCAGGATACTaGACTTTAACAACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLAEDINCFLQELHLDPFASGY*TLTTWW Trigger: CCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAA...TGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTCATATCCTGTGCCGATaGCCTTGTATTCATCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSDMETVVKNLDVAEEPVHILCR*PCIHLA Trigger: CGCCAGATGAATACAAGGTCATCGGCACAGGATATG...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTAGCCCGAAAGCACCTCTGTGGCATTTTCTAGATCTGCTTGATTATTCTTTACGACAGACCATGTaGTTACAACCGCCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSPKAPLWHFLDLLDYSLRQTM*LQPPSF Trigger: GAAGGATGGCGGTTGTAATCACATGGTCTGTCGTAA...AGAATAATCAAGCAGATCTAGAAAATGCCACAGAGGTGCTTTCGGGCTACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | GGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTCAGTATCGCAGAGGACATCAACTaGTTTCTTCAGGAACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVCLQTEPTATHTSNFSIAEDIN*FLQELH Trigger: GTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGC...GATACTGAAATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCTTCTGTTTCACCTGAGCATACAGCTTATGCTCGAAGCGTAGACTCTTTATCCCAATTGAAGTaGCTAAGGAGTATTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSVSPEHTAYARSVDSLSQLK*LRSILV Trigger: CACGAGAATACTCCTTAGCCACTTCAATTGGGATAA...AGAGTCTACGCTTCGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGATGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTTGGACTTTAACAACATaGTGGCAATCTGGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSDMETVVKNLDVAEEPVWTLTT*WQSGAG Trigger: TCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCA...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTCAGTTAAAGCAAAACTaGCGGCCACATTTGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSDMETVVKNLDVAEEPVQLKQN*RPHLQR Trigger: TCGCTGCAAATGTGGCCGCCAGTTTTGCTTTAACTG...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGAGTGTGGCACGACACTaGCAGAGGACATCAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLSVARH*QRTSTA Trigger: AGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACT...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGTGGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTAAGATATCACAACCATaGGCAGGACACGAAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVVFAFKLNPPQHTQVIKISQP*AGHEIV Trigger: GACTATTTCGTGTCCTGCGCATGGTTGTGATATCTT...AATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACCACTAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GGCATTTGCTTAGAATGTGACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTATCTCTTGCTGCCTTTaGATCATCCTCATTATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GICLECDFLDLDPEAENSISCCL*IILIIA Trigger: CGCTATAATGAGGATGATGCAAAGGCAGCAAGAGAT...AGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTCACATTCTAAGCAAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCAGAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTCCCACTATTCACTCCAGCACTaGATACAAAACTTATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFRVHFMQGQSQSSMYSHYSLQH*IQNLCP Trigger: TGGACATAAGTTTTGTATGCAGTGCTGGAGTGAATA...GTGGGAGTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTCTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGACTGGCGGCCACATTTaGAGCGAACTGGTTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMTGGHI*SELVLH Trigger: ATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGT...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTCCCACAGATCTTTTTCATATCTCTTGCTGCCTTTaGATCATCCTCATTATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ILCRASLSPQCTPTDLFHISCCL*IILIIA Trigger: CGCTATAATGAGGATGATGCAAAGGCAGCAAGAGAT...ATGAAAAAGATCTGTGGGAGTACATTGAGGACTGAGACTGGCCCTGCATAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CCA 90 bp | GGCATTTGCTTAGAATGTGACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTTTTGCATCAGGATACTaGACTTTAACAACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GICLECDFLDLDPEAENSFASGY*TLTTWW Trigger: CCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAA...AGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTCACATTCTAAGCAAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGTTTTCAGAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACACATTTGCAGCGAACTaGTTTTGCATCAGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GKVFRVHFMQGQSQSSMYTFAAN*FCIRIL Trigger: CAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGT...GTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTCTGAAAACTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR TCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGATCTTCTGTTTCACCTaGGCATACAGCTTATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLIFCFT*AYSLCS Trigger: CGAGCATAAGCTGTATGCTCAGGTGAAACAGAAGAT...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGTTGGGCATCTCTTGCTaGCTTTGCATCATCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLLGISC*LCIILI Trigger: AATGAGGATGATGCAAAGGCAGCAAGAGATGCCCAA...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTCCCACAGATCTTTTTCATGACCTTGTATTCATCTaGCGAGTTCGAGACTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILCRASLSPQCTPTDLFHDLVFI*RVRDFL Trigger: TAAAAAGTCTCGAACTCGCCAGATGAATACAAGGTC...ATGAAAAAGATCTGTGGGAGTACATTGAGGACTGAGACTGGCCCTGCATAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CCA 90 bp | GGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTCAGTATCCCACTTACATTTAACTaGATCATGCCAATTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GVCLQTEPTATHTSNFSIPLTFN*IMPIFT Trigger: GGTGAAAATTGGCATGATCCAGTTAAATGTAAGTGG...GATACTGAAATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR GCA 90 bp | GGCATTTGCTTAGAATGTGACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTTTCCTTTGTGTTAGCTaGAATCCAATTAGAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GICLECDFLDLDPEAENSFLCVS*NPIRSF Trigger: GAAACTTCTAATTGGATTGCAGCTAACACAAAGGAA...AGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTCACATTCTAAGCAAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | ACAAACAACAATTTAAAGTCAATGTTCAAGAGGCAGAAACCAGAAAGCTTTCAGACTTTAACAACATGGTaGCAATCTGGGGCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TNNNLKSMFKRQKPESFQTLTTW*QSGAGH Trigger: GTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGT...CTGAAAGCTTTCTGGTTTCTGCCTCTTGAACATTGACTTTAAATTGTTGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGTTATCCCAATTGAAGTaGCTAAGGAGTATTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLLSQLK*LRSILV Trigger: CACGAGAATACTCCTTAGCCACTTCAATTGGGATAA...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCCACATGGATTCATTTTTAGAGATGCTAAGTGCCAAAGTGACTGATTTGACTGGTTATTCTTTTTaGGGTAGAAAGCGAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHMDSFLEMLSAKVTDLTGYSF*GRKRRH Trigger: ATGTCTTCGCTTTCTACCTCAAAAAGAATAACCAGT...CAAATCAGTCACTTTGGCACTTAGCATCTCTAAAAATGAATCCATGTGGGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| 3UTR CAA 72 bp | AAAAAGATACAAGTTGATCCTAAAGCGACAAGTGGTTaGAGGAAGCAGCATAATATACTCAGCAAACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKIQVDPKATSG*RKQHNILSKHS Trigger: TGAATGTTTGCTGAGTATATTATGCTGCTTCCTCAAACCACTTGTCGCTTTAGGATCAACTTGTATCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS TCA 90 bp | CCTCCCGGATACATTCCACCATGTGCTGCAGGATCTGTTCGGCCGTaGGCACCTCGTAGCGGTAATCCTCCTCCTGCTCGTGTCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGYIPPCAAGSVRP*APRSGNPPPARVPG Trigger: GCCCGGGACACGAGCAGGAGGAGGATTACCGCTACGAGGTGCTCACGGCCGAACAGATCCTGCAGCACATGGTGGAATGTATCCGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171975.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCTAGAAAGCCTACGGCAGGCAGTGTGCGTGGTGTGGGCACACAGGCTGCATCTCTTGCTGCCTTaGCATCATCCTCATTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLESLRQAVCVVWAHRLHLLLP*HHPHYS Trigger: GCTATAATGAGGATGATGCAAAGGCAGCAAGAGATG...CAGCCTGTGTGCCCACACCACGCACACTGCCTGCCGTAGGCTTTCTAGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCTCGATCCAGGACATGTaGTGCTGCTGCATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFLDLDPEAENSRHEAHGSIQDM*CCCISS Trigger: GGAGGAGATGCAGCAGCACAACATGTCCTGGATCGA...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGCACGACACTGGCAGAGGACATCAACTGCTTTCTTCAGGAACTGCACCGCTCTTGGGCATCTCTaGCTGCCTTTGCATCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVARHWQRTSTAFFRNCTALGHL*LPLHHP Trigger: AGGATGATGCAAAGGCAGCAAGAGATGCCCAAGAGC...GGTGCAGTTCCTGAAGAAAGCAGTTGATGTCCTCTGCCAGTGTCGTGCCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CAA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCGCTCTTGGGCATCTCTaGCTGCCTTTGCATCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: DFLDLDPEAENSRHEAHGALGHL*LPLHHP Trigger: AGGATGATGCAAAGGCAGCAAGAGATGCCCAAGAGC...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCTGCATCTTCTGGATGACCTCGTaGACCTCCCGGATACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAFFRNCTSIQDMLCCCIFWMTS*TSRIHS Trigger: GGAATGTATCCGGGAGGTCAACGAGGTCATCCAGAA...GATGCAGCAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGGACATGTTGTGCTGCTGCATCTCCTCCATCTTCTGTTTCACCTGAGCATCCTGTGCCGATGACCTaGTATTCATCTGGCGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRTCCAAASPPSSVSPEHPVPMT*YSSGEF Trigger: GAACTCGCCAGATGAATACAAGGTCATCGGCACAGG...ATGCTCAGGTGAAACAGAAGATGGAGGAGATGCAGCAGCACAACATGTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
||
| CDS CCA 90 bp | AACTGGCGGCCACATTTGCAGCGAACTGGTTTTGCATCAGGATACTaGACTTTAACAACATGGTGGCAATCTGGGGCAGGACACCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: NWRPHLQRTGFASGY*TLTTWWQSGAGHHF Trigger: AAAGTGGTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS GCA 90 bp | CTCTTTATCCCAATTGAAGTGGCTAAGGAGTATTCTCGTGATAGTTaGTGGATTCTCGCCCAGATCCAGGTTATCATCGTCCGGCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: LFIPIEVAKEYSRDS*WILAQIQVIIVRLV Trigger: GACGAGCCGGACGATGATAACCTGGATCTGGGCGAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165322.2 |
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| CDS CCA 90 bp | CAGCGAACTGGTTTTGCATCAGGATACTGGACTTTAACAACATGGTaGCAATCTGGGGCAGGACACCACTTTAACAGTCGGTTGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: QRTGFASGYWTLTTW*QSGAGHHFNSRLHS Trigger: AGAGTGCAACCGACTGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 90 bp | TTGCAGCGAACTGGTTTTGCATCAGGATACTGGACTTTAACAACATaGTGGCAATCTGGGGCAGGACACCACTTTAACAGTCGGTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LQRTGFASGYWTLTT*WQSGAGHHFNSRLH Trigger: GTGCAACCGACTGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 90 bp | TTTATCCCAATTGAAGTGGCTAAGGAGTATTCTCGTGATAGTTGCTaGATTCTCGCCCAGATCCAGGTTATCATCGTCCGGCTCGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: FIPIEVAKEYSRDSC*ILAQIQVIIVRLVL Trigger: GAGGACGAGCCGGACGATGATAACCTGGATCTGGGCGAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165322.2 |
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| CDS-3UTR CAA 90 bp | GACTTCCTGGATCTAGATCCAGAAGCGGAGAATTCTAGGCATGAGGCCCATGGCAGGCGCATAACTGTGTaGTCATCCACTAAGATATCA | + |
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Preference number: 5 (lower is better) Translates to: DFLDLDPEAENSRHEAHGRRITV*SSTKIS Trigger: TGATATCTTAGTGGATGACAACACAGTTATGCGCCT...GCCATGGGCCTCATGCCTAGAATTCTCCGCTTCTGGATCTAGATCCAGGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| CDS CCA 90 bp | GGCATTTGGGACATTCCAAAACTGGCGGCCACATTTGCAGCGAACTaGTTTTGCATCAGGATACTGGACTTTAACAACATGGTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: GIWDIPKLAATFAAN*FCIRILDFNNMVAI Trigger: GATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGGAATGTCCCAAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS-3UTR CAA 90 bp | GACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGATTGTGACATGGCATTaGGGACATTCCAAAACTGGC | + |
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Preference number: 5 (lower is better) Translates to: DINCFLQELHLDPGHVVLIVTWH*GHSKTG Trigger: GCCAGTTTTGGAATGTCCCAAATGCCATGTCACAAT...CAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS-3UTR CAA 90 bp | GACATCAACTGCTTTCTTCAGGAACTGCACCTCGATCCAGGACATGTTGTGCTGCATCTCTTGCTGCCTTaGCATCATCCTCATTATAGC | + |
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Preference number: 5 (lower is better) Translates to: DINCFLQELHLDPGHVVLHLLLP*HHPHYS Trigger: GCTATAATGAGGATGATGCAAAGGCAGCAAGAGATG...CAGCACAACATGTCCTGGATCGAGGTGCAGTTCCTGAAGAAAGCAGTTGATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS GCA 90 bp | ATCAGGCGCATAACTGTGTTGTCATCCACTAAGATATCACAACCATaGGCAGGACACGAAATAGTCTGCCCCATGCCTTCCTCCATTATT | + |
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Preference number: 5 (lower is better) Translates to: IRRITVLSSTKISQP*AGHEIVCPMPSSII Trigger: AATAATGGAGGAAGGCATGGGGCAGACTATTTCGTGTCCTGCGCATGGTTGTGATATCTTAGTGGATGACAACACAGTTATGCGCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | TATCTCGTTCAAGGTAGCCCGAAAGCACCTCTGTGGCATTTTCTAGATCTGCTTTGCAGCGAACTGGTTTaGCATCAGGATACTGGACTT | + |
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Preference number: 5 (lower is better) Translates to: YLVQGSPKAPLWHFLDLLCSELV*HQDTGL Trigger: AAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCA...AAGCAGATCTAGAAAATGCCACAGAGGTGCTTTCGGGCTACCTTGAACGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS TCA 90 bp | AGGGTAGTTCAAGTAGCAGATCTGACACGGCATATCCTGTGCCGATaGCCTTGTATTCATCTGGCGAGTTCGAGACTTTTTACTTGGATT | + |
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Preference number: 5 (lower is better) Translates to: RVVQVADLTRHILCR*PCIHLASSRLFTWI Trigger: AATCCAAGTAAAAAGTCTCGAACTCGCCAGATGAATACAAGGTCATCGGCACAGGATATGCCGTGTCAGATCTGCTACTTGAACTACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 90 bp | TTCACCACAGTTAAAGCAAAACTGGCGGCCACATTTGCAGCGAACTaGTTTTGCATCAGGATACTGGACTTTAACAACATGGTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: FTTVKAKLAATFAAN*FCIRILDFNNMVAI Trigger: GATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGCTTTAACTGTGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | ATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTACGTTCTGGATGACCTCGTaGACCTCCCGGATACATTCC | + |
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Preference number: 5 (lower is better) Translates to: ITVDKECKKPLLLVLDATFWMTS*TSRIHS Trigger: GGAATGTATCCGGGAGGTCAACGAGGTCATCCAGAA...CGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | CTCGTTCAAGGTAGCCCGAAAGCACCTCTGTGGCATTTTCTAGATCTGCTTGATAGGCGCATAACTGTGTaGTCATCCACTAAGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: LVQGSPKAPLWHFLDLLDRRITV*SSTKIS Trigger: TGATATCTTAGTGGATGACAACACAGTTATGCGCCT...ATCAAGCAGATCTAGAAAATGCCACAGAGGTGCTTTCGGGCTACCTTGAACGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS TCA 90 bp | ACCCAGCAAAATTCTGCTTTACAGTTCTGGTTACGACAGACCATGTaGTTACAACCGCCATCCTTCTCAATTGTGACATGGCATTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQQNSALQFWLRQTM*LQPPSFSIVTWHLG Trigger: TCCCAAATGCCATGTCACAATTGAGAAGGATGGCGGTTGTAATCACATGGTCTGTCGTAACCAGAACTGTAAAGCAGAATTTTGCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | CTGTCAGATATGGAGACGGTTGTTAAAAACTTGGATGTAGCAGAAGAGCCAGTTTGCAGCGAACTGGTTTaGCATCAGGATACTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LSDMETVVKNLDVAEEPVCSELV*HQDTGL Trigger: AAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCA...AACTGGCTCTTCTGCTACATCCAAGTTTTTAACAACCGTCTCCATATCTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| CDS CCA 90 bp | CCATCAAAGTACCTTTCCATTAGCTTCTCTTTATCCCAATTGAAGTaGCTAAGGAGTATTCTCGTGATAGTTGCTGGATTCTCGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSKYLSISFSLSQLK*LRSILVIVAGFSPR Trigger: TCTGGGCGAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTACTTTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165322.2 |
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| CDS CCA 90 bp | CCATCAAAGTACCTTTCCATTAGCTTCTCTTTATCCCAATTGAAGTaGCTAAGGAGTATTCTCGTGATAGTTGCTGGATTCTGGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PSKYLSISFSLSQLK*LRSILVIVAGFWMT Trigger: GGTCATCCAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTACTTTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | GGTGTTTGCCTTCAAACTGAACCCACCGCAACACACACAAGTAATTTCAGTATCATCTTGCAGAGAATCTaGGGAAATATCTCGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVCLQTEPTATHTSNFSIILQRI*GNISFK Trigger: CTTGAACGAGATATTTCCCAAGATTCTCTGCAAGAT...GATACTGAAATTACTTGTGTGTGTTGCGGTGGGTTCAGTTTGAAGGCAAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | GGTAAAGTTTTCAGAGTTCATTTTATGCAGGGCCAGTCTCAGTCCTCAATGTACTTCTCTTTATCCCAATaGAAGTGGCTAAGGAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GKVFRVHFMQGQSQSSMYFSLSQ*KWLRSI Trigger: AATACTCCTTAGCCACTTCAATTGGGATAAAGAGAA...GTACATTGAGGACTGAGACTGGCCCTGCATAAAATGAACTCTGAAAACTTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS-3UTR CAA 90 bp | ATTACAGTTGACAAAGAATGCAAAAAGCCACTTCTTCTGGTTCTGGATGCTACGATTGTGACATGGCATTaGGGACATTCCTTTGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ITVDKECKKPLLLVLDATIVTWH*GHSFVL Trigger: TAACACAAAGGAATGTCCCAAATGCCATGTCACAAT...CGTAGCATCCAGAACCAGAAGAAGTGGCTTTTTGCATTCTTTGTCAACTGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| CDS-3UTR CAA 90 bp | TATGCTTTTGAGTTTGGTATCCCTAGATCCCACATGGATTCATTTTTAGAGATGTTCTCTTTATCCCAATaGAAGTGGCTAAGGAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: YAFEFGIPRSHMDSFLEMFSLSQ*KWLRSI Trigger: AATACTCCTTAGCCACTTCAATTGGGATAAAGAGAA...CATCTCTAAAAATGAATCCATGTGGGATCTAGGGATACCAAACTCAAAAGCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171975.8 |
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| CDS CAA 72 bp | ATTCTCGTGATAGTTGCTGGATTCTGGATGACCTCGTaGACCTCCCGGATACATTCCACCATGTGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILVIVAGFWMTS*TSRIHSTMCCR Trigger: CCTGCAGCACATGGTGGAATGTATCCGGGAGGTCAACGAGGTCATCCAGAATCCAGCAACTATCACGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171975.8 |
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| CDS GCA 72 bp | CGCCCTAGATCGCTCTTGGGCATCTCTTGCTGCCTTTaGATCATCCTCATTATAGCGGTTACAGTTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: RPRSLLGISCCL*IILIIAVTVVP Trigger: TGGTACAACTGTAACCGCTATAATGAGGATGATGCAAAGGCAGCAAGAGATGCCCAAGAGCGATCTAGGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS GCA 72 bp | CCAAAACTGGCGGCCACATTTGCAGCGAACTGGTTTTaGATCAGGATACTGGACTTTAACAACATGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PKLAATFAANWF*IRILDFNNMVA Trigger: TGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS GCA 72 bp | TGGCATTTGGGACATTCCAAAACTGGCGGCCACATTTaGAGCGAACTGGTTTTGCATCAGGATACTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: WHLGHSKTGGHI*SELVLHQDTGL Trigger: AAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGGAATGTCCCAAATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS GCA 72 bp | GCAAAACTGGCGGCCACATTTGCAGCGAACTGGTTTTaGATCAGGATACTGGACTTTAACAACATGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AKLAATFAANWF*IRILDFNNMVA Trigger: TGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | GGTTTTGCATCAGGATACTGGACTTTAACAACATGGTaGCAATCTGGGGCAGGACACCACTTTAACAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GFASGYWTLTTW*QSGAGHHFNSR Trigger: CCGACTGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | CCACATTTGCAGCGAACTGGTTTTGCATCAGGATACTaGACTTTAACAACATGGTGGCAATCTGGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PHLQRTGFASGY*TLTTWWQSGAG Trigger: TCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | ATTGAAGTGGCTAAGGAGTATTCTCGTGATAGTTGCTaGATTCTCGCCCAGATCCAGGTTATCATCGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: IEVAKEYSRDSC*ILAQIQVIIVR Trigger: CCGGACGATGATAACCTGGATCTGGGCGAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165322.2 |
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| CDS CAA 72 bp | TTACAACCGCCATCCTTCTCAATTGTGACATGGCATTaGGGACATTCCAAAACTGGCGGCCACATTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQPPSFSIVTWH*GHSKTGGHICS Trigger: GCTGCAAATGTGGCCGCCAGTTTTGGAATGTCCCAAATGCCATGTCACAATTGAGAAGGATGGCGGTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS TCA 72 bp | CAAGTAGCAGATCTGACACGGCATATCCTGTGCCGATaGCCTTGTATTCATCTGGCGAGTTCGAGACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QVADLTRHILCR*PCIHLASSRLF Trigger: AAAAAGTCTCGAACTCGCCAGATGAATACAAGGTCATCGGCACAGGATATGCCGTGTCAGATCTGCTACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS GCA 72 bp | CCAATTGAAGTGGCTAAGGAGTATTCTCGTGATAGTTaGTGGATTCTCGCCCAGATCCAGGTTATCATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PIEVAKEYSRDS*WILAQIQVIIV Trigger: GACGATGATAACCTGGATCTGGGCGAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165322.2 |
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| CDS CAA 72 bp | AGCAGATCTGACACGGCATATCCTGTGCCGATGACCTaGTATTCATCTGGCGAGTTCGAGACTTTTTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSDTAYPVPMT*YSSGEFETFYL Trigger: CAAGTAAAAAGTCTCGAACTCGCCAGATGAATACAAGGTCATCGGCACAGGATATGCCGTGTCAGATCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | ACTGGTTTTGCATCAGGATACTGGACTTTAACAACATaGTGGCAATCTGGGGCAGGACACCACTTTAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TGFASGYWTLTT*WQSGAGHHFNS Trigger: ACTGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | GACATTCCAAAACTGGCGGCCACATTTGCAGCGAACTaGTTTTGCATCAGGATACTGGACTTTAACAACATG | + |
|
Preference number: 6 (lower is better) Translates to: DIPKLAATFAAN*FCIRILDFNNM Trigger: CATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGGAATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026264.12 |
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| CDS CCA 72 bp | GTTAAAGCAAAACTGGCGGCCACATTTGCAGCGAACTaGTTTTGCATCAGGATACTGGACTTTAACAACATG | + |
|
Preference number: 6 (lower is better) Translates to: VKAKLAATFAAN*FCIRILDFNNM Trigger: CATGTTGTTAAAGTCCAGTATCCTGATGCAAAACCAGTTCGCTGCAAATGTGGCCGCCAGTTTTGCTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS TCA 72 bp | AATTCTGCTTTACAGTTCTGGTTACGACAGACCATGTaGTTACAACCGCCATCCTTCTCAATTGTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: NSALQFWLRQTM*LQPPSFSIVTW Trigger: CCATGTCACAATTGAGAAGGATGGCGGTTGTAATCACATGGTCTGTCGTAACCAGAACTGTAAAGCAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | CACGGCATATCCTGTGCCGATGACCTTGTATTCATCTaGCGAGTTCGAGACTTTTTACTTGGATTAATTACA | + |
|
Preference number: 6 (lower is better) Translates to: HGISCADDLVFI*RVRDFLLGLIT Trigger: TGTAATTAATCCAAGTAAAAAGTCTCGAACTCGCCAGATGAATACAAGGTCATCGGCACAGGATATGCCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CAA 72 bp | TTACAACCGCCATCCTTCTCAATTGTGACATGGCATTaGGGACATTCCTTTGTGTTAGCTGCAATCCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: LQPPSFSIVTWH*GHSFVLAAIQL Trigger: TAATTGGATTGCAGCTAACACAAAGGAATGTCCCAAATGCCATGTCACAATTGAGAAGGATGGCGGTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CAA 90 bp | AGGTTTCCATCAAAGTACCTTTCCATTAGCTTCTCTTTATCCCAATaGAAGTGGCTAAGGAGTATTCTCGTGATAGTTGCTGGATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RFPSKYLSISFSLSQ*KWLRSILVIVAGFW Trigger: CCAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTACTTTGATGGAAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026264.12 ENSMUST00000171975.8 |
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| CDS CAA 90 bp | AGGTTTCCATCAAAGTACCTTTCCATTAGCTTCTCTTTATCCCAATaGAAGTGGCTAAGGAGTATTCTCGTGATAGTTGCTGGATTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RFPSKYLSISFSLSQ*KWLRSILVIVAGFS Trigger: CGAGAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTACTTTGATGGAAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165322.2 |
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| CDS CCA 72 bp | TACCTTTCCATTAGCTTCTCTTTATCCCAATTGAAGTaGCTAAGGAGTATTCTCGTGATAGTTGCTGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: YLSISFSLSQLK*LRSILVIVAGF Trigger: GAATCCAGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CCA 72 bp | CCTTGTATTCATCTGGCGAGTTCGAGACTTTTTACTTaGATTAATTACATGACACTCAGCAAAGAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PCIHLASSRLFT*INYMTLSKELL Trigger: GAGAAGCTCTTTGCTGAGTGTCATGTAATTAATCCAAGTAAAAAGTCTCGAACTCGCCAGATGAATACAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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| CDS CAA 72 bp | TCAAAGTACCTTTCCATTAGCTTCTCTTTATCCCAATaGAAGTGGCTAAGGAGTATTCTCGTGATAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKYLSISFSLSQ*KWLRSILVIVA Trigger: AGCAACTATCACGAGAATACTCCTTAGCCACTTCAATTGGGATAAAGAGAAGCTAATGGAAAGGTACTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026264.12 ENSMUST00000165322.2 ENSMUST00000171975.8 |
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