Pregenerated sensors for ARID4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048118Ensembl transcript IDs: ENSMUST00000046305.12, ENSMUST00000125125.2, ENSMUST00000135709.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATACAATCCTGGAAACTATACAGGAAGGATATACTTAGCCGGCTaGGTGCTTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTC | + |
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Preference number: 1 (lower is better) Translates to: RYNPGNYTGRIYLAG*VLSVVVFQGLGIYV Trigger: GACATAAATCCCCAAACCCTGAAATACAACCACAGAAAGCACTCAGCCGGCTAAGTATATCCTTCCTGTATAGTTTCCAGGATTGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTGGGGATTTATGTCCATaGCAGCAAACTGCTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPVCCVRLSMISRTLESFGDLCP*QQTAVG Trigger: CCCCACAGCAGTTTGCTGCCATGGACATAAATCCCC...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| 3UTR TCA 72 bp | CCTGGAAACTATACAGGAAGGATATACTTAGCCGGCTaGGTGCTTTCTGTGGTTGTATTTCAGGGTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: PGNYTGRIYLAG*VLSVVVFQGLG Trigger: CCCCAAACCCTGAAATACAACCACAGAAAGCACTCAGCCGGCTAAGTATATCCTTCCTGTATAGTTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| 3UTR CCA 72 bp | ACTTTTAAACCTGGGCACACTGCTGCACATATACTTTaGCAGTTCTACATAGCAAGTGCTTCCACAAAATTG | + |
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Preference number: 3 (lower is better) Translates to: TFKPGHTAAHIL*QFYIASASTKL Trigger: CAATTTTGTGGAAGCACTTGCTATGTAGAACTGCCAAAGTATATGTGCAGCAGTGTGCCCAGGTTTAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCAAGATCTTCACCCCCTaGGCTCTTCTCCAGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFKIFTP*ALLQLV Trigger: GACCAGCTGGAGAAGAGCTCAGGGGGTGAAGATCTT...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCTCCACTTGTATGTCCTaGGGGAGGAGTTCGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFSTCMS*GRSSDA Trigger: AGCATCCGAACTCCTCCCCCAGGACATACAAGTGGA...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCTCTGCATCTTTGATGTaGGGCGAGGTTCTTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFSASLM*GEVLAG Trigger: TCCTGCAAGAACCTCGCCTCACATCAAAGATGCAGA...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCACTGGCGTCCCAAAATaGTCTGGGTTTGTTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFTGVPK*SGFVRG Trigger: TCCTCTAACAAACCCAGAGCATTTTGGGACGCCAGT...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCGTGCTTCTCCTTCTCTaGATCTTTGATGTGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFVLLLL*IFDVRR Trigger: TCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCAC...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTTGCTCTTCGCAGCCCTaGCCTAGCACAGAGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: FCGCISGFGDLCPWQQTACSSQP*PSTELR Trigger: TCTGAGCTCTGTGCTAGGCCAGGGCTGCGAAGAGCA...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCCACCAGAGGCAACACTaGCTTCAAACCCGTTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCHQRQH*LQTRSP Trigger: CGGCGAACGGGTTTGAAGCCAGTGTTGCCTCTGGTG...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCGCTTCAGAAGTACCTTaGCTTTCACCAGCCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFASEVP*LSPAFS Trigger: TGAAAAGGCTGGTGAAAGTCAAGGTACTTCTGAAGC...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCTCTTCCTCTTCATCTaGGTCTCTCTCAGAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGLFLFI*VSLRVL Trigger: GAGGACTCTGAGAGAGACTCAGATGAAGAGGAAGAG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCCCCGTTTGGACTTCTaGCTCTCTTCATCCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGPRLDF*LSSSLF Trigger: AAAGAGGGATGAAGAGAGGCAGAAGTCCAAACGGGG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCCTTCTGTTTCAAAGTaGTGTTCCACGTGTGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGPSVSK*CSTCAP Trigger: AGGCGCACACGTGGAACAGCACTTTGAAACAGAAGG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGCTCTCTCGCTCGTGTaGAATTATACTACAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGALSLV*NYTTGT Trigger: GGTGCCTGTAGTATAATTGCACACGAGCGAGAGAGC...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACGGCGCTTCACTGGGGTaGAGTTACTGGAGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYGASLG*SYWSCP Trigger: TGGACAGCTCCAGTAACTGCACCCCAGTGAAGCGCC...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGATGCTTCTCTCGGTaGTTCTCCTTCTCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGGCFSR*FSFSAS Trigger: AGATGCAGAGAAGGAGAAGCACCGAGAGAAGCATCC...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTGGTCTTCTTTGCAATaGCTGGCGTCCCAAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGWSSLQ*LASQNA Trigger: AGCATTTTGGGACGCCAGTCATTGCAAAGAAGACCA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCCACAGTCTTGATCTTTaGCTCACAGAAGGCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCHSLDL*LTEGPS Trigger: CGAGGGGCCTTCTGTGAGGCAAAGATCAAGACTGTG...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCTCTGAACTGAATATTTaGAGAACGGCAGTACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFSELNI*RTAVLL Trigger: GAGGAGTACTGCCGTTCTGCAAATATTCAGTTCAGA...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCTTTGTTCTTTGGTGTaGTCTTCCTCCCGAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGLCSLV*SSSRTA Trigger: TGCTGTTCGGGAGGAAGAGCACACCAAAGAACAAAG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCTTTTCAGTTTTGGCTaGAGCACTTGTCCGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGLFSFG*STCPLW Trigger: CCAAAGCGGACAAGTGCTGCAGCCAAAACTGAAAAG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTAAACAGGTGGTTTGTTaGTCGGAGTACCTCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGKQVVC*SEYLCL Trigger: AAGACAGAGGTACTCCGATCAACAAACCACCTGTTT...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTTCCTCGTCCGTACTTaGCCTTCACTTTGGTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYFLVRT*PSLWFP Trigger: CGGGAACCAAAGTGAAGGTCAAGTACGGACGAGGAA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTCTGACCCTTCTCTCTaGTCTCTCGCTCGTGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYSDPSL*SLARVQ Trigger: TTGCACACGAGCGAGAGAGCAGAGAGAAGGGTCAGA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTATAGCCCAAAACAGGTaGTTTGTTGATCGGAGTACC | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGIAQNR*FVDRST Trigger: GGTACTCCGATCAACAAACCACCTGTTTTGGGCTAT...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCGCCTTCCCTTCCCTTTaGGAGACTTTTCCACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCAFPSL*ETFPPV Trigger: AACAGGTGGAAAAGTCTCCCAAAGGGAAGGGAAGGC...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCCCACATCCTCAATACTaGTCTTATCCTTCTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: GLGIYVHGSKLLWGGELFPHPQY*SYPSHL Trigger: TAGATGAGAAGGATAAGACCAGTATTGAGGATGTGG...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTCCTCCTTCTGTCGATaGTTGCAACTTCAGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGSSFCR*LQLQTS Trigger: TGAAGTCTGAAGTTGCAACCATCGACAGAAGGAGGA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTCTCGGTACTTGGCACTaGCATCAGTTCCCACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SPVCCVRLSMISRTLESFLGTWH*HQFPLS Trigger: TGACAGTGGGAACTGATGTCAGTGCCAAGTACCGAG...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTTTTGTTAGAGGAAGCTaGTCCAGAGTCTCACTCTCG | + |
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Preference number: 4 (lower is better) Translates to: FCGCISGFGDLCPWQQTAFVRGS*SRVSLS Trigger: CGAGAGTGAGACTCTGGATCAGCTTCCTCTAACAAA...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTTCGCTTGGCCTTTTCTaGCCCTTCTCTCTGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SPVCCVRLSMISRTLESFSLGLF*PFSLLS Trigger: AGAGAGCAGAGAGAAGGGTCAGAAAAGGCCAAGCGA...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACATTGACGCTCCTGCGTaGGACACTTCTCTGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYIDAPA*DTSLSF Trigger: GAAAGACAGAGAAGTGTCTCACGCAGGAGCGTCAAT...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTAAAGGTCTTTTGTCTTaGTGCGCCTTCCCTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: FCGCISGFGDLCPWQQTAKGLLS*CAFPSL Trigger: AAGGGAAGGGAAGGCGCAGCAAGACAAAAGACCTTT...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCAGTGCTCTCTGCTGTaGAGGCCACACTTACAACTT | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYQCSLL*RPHLQL Trigger: AAGTTGTAAGTGTGGCCTCCACAGCAGAGAGCACTG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTCCAGGTCTACCTCATaGCAAACCAAGGTTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYSRSTS*QTKVSG Trigger: GCCTGAAACCTTGGTTTGCCATGAGGTAGACCTGGA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTTGGCTGAGAGTGAGTaGGGAAGCTACGGAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCLAESE*GSYGKV Trigger: AACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAA...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACGCCTTTTCACAGTCTTaGTCTTTGCCTCACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYAFSQS*SLPHRR Trigger: CCTTCTGTGAGGCAAAGATCAAGACTGTGAAAAGGC...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR TCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTTCTGAGGGCTGTGCCTaGGTCCTGTCGTTTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SPVCCVRLSMISRTLESFSEGCA*VLSFSF Trigger: AAAAGAAAACGACAGGACTCAGGCACAGCCCTCAGA...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTCGTCAGACCTCTCTTaGGACACTCCAGTTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYSSDLS*DTPVVI Trigger: AATGACAACTGGAGTGTCCCAAGAGAGGTCTGACGA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTACTATTTCCATCGCTTaGCCTTTTCTGACCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FCGCISGFGDLCPWQQTATISIA*PFLTLL Trigger: GAGAAGGGTCAGAAAAGGCCAAGCGATGGAAATAGT...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCGTTCTTTTCAGTTTTaGCTGCAGCACTTGTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYRSFQF*LQHLSA Trigger: AGCGGACAAGTGCTGCAGCCAAAACTGAAAAGAACG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACGCTACGGAAAAGTTATaGTGTGCTACAGGAGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYATEKL*CATGGK Trigger: CTTACCTCCTGTAGCACAGCATAACTTTTCCGTAGC...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR GCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACGTCACTGCTCTGTCCTaGTCCGTTCTTTTCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYVTALS*SVLFSF Trigger: AAAACTGAAAAGAACGGAGCAGGACAGAGCAGTGAC...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTCTTCGTCATCACTGCTaGAGGACTCAAGGATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCCVRLSMISRTLESFLRHHC*RTQGFH Trigger: GTGAAATCCTTGAGTCCTCCAGCAGTGATGACGAAG...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR TCA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTATTGTAGGAAGCAGCTaGATTCAAAATTGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCGCISGFGDLCPWQQTAIVGSS*IQNWNA Trigger: GGCATTCCAATTTTGAATTCAGCTGCTTCCTACAAT...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR TCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCCATCTCCGTGCTTTTaGTGCTGGCTTCATAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYPSPCF*CWLHKF Trigger: AAATTTATGAAGCCAGCATCAAAAGCACGGAGATGG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTTCCTCTTTTACTTTTaGTTCATGGTGGTGAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGFLFYF*FMVVNS Trigger: ACTATTCACCACCATGAACCAAAAGTAAAAGAGGAA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CCA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTTTTTCTTTCTCATATaGGTCGATGTCATCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGFFFLI*VDVIFS Trigger: ACTGAAGATGACATCGACCCATATGAGAAAGAAAAA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTCTAATTCATTGAGCTaGAAGCTCCACTTGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCSNSLS*KLHLYV Trigger: GACATACAAGTGGAGCTTCCAGCTCAATGAATTAGA...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTATTATCTAATTCATTaGGCTGGAAGCTCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCYYLIH*AGSSTC Trigger: ACAAGTGGAGCTTCCAGCTCAATGAATTAGATAATA...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTTTACTTGGTCATCTTaGACCAACTGTGTTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLWLYFRVWGFMSMAANCFTWSS*TNCVVL Trigger: TAACACAACACAGTTGGTGCAAGATGACCAAGTAAA...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTATTCTTCGTCATCACTaGTGGAGGACTCAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCCVRLSMISRTLESFILRHH*WRTQGF Trigger: AAATCCTTGAGTCCTCCAGCAGTGATGACGAAGAAT...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCTGATAATAGCTTCCTaGATAGATCCATCAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KERGGSRYNPGNYTGRIYLIIAS*IDPSDV Trigger: GACATCTGATGGATCTATCCAGGAAGCTATTATCAG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTTGTGTTGTGTTATCCTaGTTCAGAAGTACCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCCVRLSMISRTLESFCVVLS*FRSTLT Trigger: AGTCAAGGTACTTCTGAAGCAGGATAACACAACACA...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 90 bp | CGATGGCATCCCTTCACCTTCTGTTTCAAAGTGCTGTTCCACGTGTaGGCCTTTCATGCCCTCGGCTCCCGCGCCATCGTCAGACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RWHPFTFCFKVLFHV*AFHALGSRAIVRPL Trigger: GAGAGGTCTGACGATGGCGCGGGAGCCGAGGGCATGAAAGGCGCACACGTGGAACAGCACTTTGAAACAGAAGGTGAAGGGATGCCATCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 90 bp | CCTGGGGGAGGAGTTCGGATGCTTCTCTCGGTGCTTCTCCTTCTCTaGATCTTTGATGTGAGGCGAGGTTCTTGCAGGAGACCGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGGGVRMLLSVLLLL*IFDVRRGSCRRPWQ Trigger: CTGCCACGGTCTCCTGCAAGAACCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCGAGAGAAGCATCCGAACTCCTCCCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | GGTTCTTCTTCGGCTGGACTGTCCGATTTCTCACTAGTCAGTTCTTaGAGGCCCTGGTCGGGCTCGGCTGTCAGCGATGGCATCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSSAGLSDFSLVSS*RPWSGSAVSDGIPS Trigger: TGAAGGGATGCCATCGCTGACAGCCGAGCCCGACCAGGGCCTTCAAGAACTGACTAGTGAGAAATCGGACAGTCCAGCCGAAGAAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | CCAAGGTTTCAGGCCCGATCAGAGGCATCGCATCCTCCTCTTCTTTaGGTGGCGTGTGCACCGGTTCTTCTTCGGCTGGACTGTCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: PRFQARSEASHPPLL*VACAPVLLRLDCPI Trigger: AATCGGACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGGCCTGAAACCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | TTTGATGTGAGGCGAGGTTCTTGCAGGAGACCGTGGCAGCTTCTGTaGCTTGGGCAGGGTAAGGCGCTTCACTGGGGTGCAGTTACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FDVRRGSCRRPWQLL*LGQGKALHWGAVTG Trigger: TCCAGTAACTGCACCCCAGTGAAGCGCCTTACCCTGCCCAAGTCACAGAAGCTGCCACGGTCTCCTGCAAGAACCTCGCCTCACATCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 90 bp | GGCCCGATCAGAGGCATCGCATCCTCCTCTTCTTTGAGTGGCGTGTaGACCGGTTCTTCTTCGGCTGGACTGTCCGATTTCTCACTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPIRGIASSSSLSGV*TGSSSAGLSDFSLV Trigger: GACTAGTGAGAAATCGGACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | GGTTTCAGGCCCGATCAGAGGCATCGCATCCTCCTCTTCTTTGAGTaGCGTGTGCACCGGTTCTTCTTCGGCTGGACTGTCCGATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRPDQRHRILLFFE*RVHRFFFGWTVRFL Trigger: GAGAAATCGGACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGGCCTGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | ACTAGTCAGTTCTTGAAGGCCCTGGTCGGGCTCGGCTGTCAGCGATaGCATCCCTTCACCTTCTGTTTCAAAGTGCTGTTCCACGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSQFLKALVGLGCQR*HPFTFCFKVLFHVC Trigger: GCACACGTGGAACAGCACTTTGAAACAGAAGGTGAAGGGATGCCATCGCTGACAGCCGAGCCCGACCAGGGCCTTCAAGAACTGACTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | AGGAGTTCGGATGCTTCTCTCGGTGCTTCTCCTTCTCTGCATCTTTaGTGTGAGGCGAGGTTCTTGCAGGAGACCGTGGCAGCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSSDASLGASPSLHL*CEARFLQETVAASV Trigger: CACAGAAGCTGCCACGGTCTCCTGCAAGAACCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCGAGAGAAGCATCCGAACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 90 bp | GACTCGTCTTGGCTGAGAGTGAGTGGGGAAGCTACGGAAAAGTTATaGTGTGCTACAGGAGGTAAGGCAGGTGGTACGGAAGCCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSSWLRVSGEATEKL*CATGGKAGGTEARE Trigger: CTCTCTGGCTTCCGTACCACCTGCCTTACCTCCTGTAGCACAGCATAACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAAGACGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | GCGCCTTTCATGCCCTCGGCTCCCGCGCCATCGTCAGACCTCTCTTaGGACACTCCAGTTGTCATTTCCATGCCATTATCAAGTCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: APFMPSAPAPSSDLS*DTPVVISMPLSSLN Trigger: ATTGAGACTTGATAATGGCATGGAAATGACAACTGGAGTGTCCCAAGAGAGGTCTGACGATGGCGCGGGAGCCGAGGGCATGAAAGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | TTCGGATGCTTCTCTCGGTGCTTCTCCTTCTCTGCATCTTTGATGTaGGGCGAGGTTCTTGCAGGAGACCGTGGCAGCTTCTGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGCFSRCFSFSASLM*GEVLAGDRGSFCDL Trigger: CAAGTCACAGAAGCTGCCACGGTCTCCTGCAAGAACCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCGAGAGAAGCATCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 90 bp | TTCTCTTTGTTCTTTGGTGTGCTCTTCCTCCCGAACAGCAGCTCATaGTCTCTCTTCGCTGCTGGGTCGCCATCGTCATCGTCATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLFFGVLFLPNSSS*SLFAAGSPSSSSSP Trigger: AGGTGATGACGATGACGATGGCGACCCAGCAGCGAAGAGAGAGCATGAGCTGCTGTTCGGGAGGAAGAGCACACCAAAGAACAAAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
||
| CDS CCA 90 bp | ATCCTCCTCTTCTTTGAGTGGCGTGTGCACCGGTTCTTCTTCGGCTaGACTGTCCGATTTCTCACTAGTCAGTTCTTGAAGGCCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLFFEWRVHRFFFG*TVRFLTSQFLKALV Trigger: GACCAGGGCCTTCAAGAACTGACTAGTGAGAAATCGGACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | TCTCTCGCTCGTGTGCAATTATACTACAGGCACCAGAGGCAACACTaGCTTCAAACCCGTTCGCCGATTCCCTCTCACAGAGGCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLARVQLYYRHQRQH*LQTRSPIPSHRGLL Trigger: AAGAAGGCCTCTGTGAGAGGGAATCGGCGAACGGGTTTGAAGCCAGTGTTGCCTCTGGTGCCTGTAGTATAATTGCACACGAGCGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCTACTTGACCTTCACTTaGGTTCCCGTCAGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGIYVHGSKLLWGGELFYLTFT*VPVRQG Trigger: GCCCTGCCTGACGGGAACCAAAGTGAAGGTCAAGTA...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | CCTCAGGATCAAGCTCTTCCTCAGGCAGCTCTTCTTCCTCCTTTTTaGCCTCTTTTTCCTTCTCCTCTTCATGTTCCTCAGCTGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PQDQALPQAALLPPF*PLFPSPLHVPQLGI Trigger: AATGCCCAGCTGAGGAACATGAAGAGGAGAAGGAAAAAGAGGCCAAAAAGGAGGAAGAAGAGCTGCCTGAGGAAGAGCTTGATCCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCCACTATTTCCATCGCTaGGCCTTTTCTGACCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGIYVHGSKLLWGGELFHYFHR*AFSDPS Trigger: AGAAGGGTCAGAAAAGGCCAAGCGATGGAAATAGTG...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCCGTTCTTTTCAGTTTaGGCTGCAGCACTTGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGPFFSV*AAALVR Trigger: GCGGACAAGTGCTGCAGCCAAAACTGAAAAGAACGG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTGTGAGGCGAGGTTCTaGCAGGAGACCGTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYCEARF*QETVAA Trigger: AGCTGCCACGGTCTCCTGCAAGAACCTCGCCTCACA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTAGCTGGAAGCTCCACTaGTATGTCCTGGGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FCGCISGFGDLCPWQQTASWKLH*YVLGEE Trigger: CTCCTCCCCCAGGACATACAAGTGGAGCTTCCAGCT...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | GGCTTCAAACCCGTTCGCCGATTCCCTCTCACAGAGGCCTTCTTGTaGTTCTTCGGCGATGCTATCAACTTCAATTGTAATGTCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFKPVRRFPLTEAFL*FFGDAINFNCNVTL Trigger: GAGAGTGACATTACAATTGAAGTTGATAGCATCGCCGAAGAATCACAAGAAGGCCTCTGTGAGAGGGAATCGGCGAACGGGTTTGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | TTGACATCAGGAGAAAGATCTTCACCCCCTGAGCTCTTCTCCAGCTaGTCGTCTGCCTCACTATCAGATGAACAGGAGTCTGATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSGERSSPPELFSS*SSASLSDEQESDFP Trigger: AGGAAAATCAGACTCCTGTTCATCTGATAGTGAGGCAGACGACCAGCTGGAGAAGAGCTCAGGGGGTGAAGATCTTTCTCCTGATGTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
||
| CDS CCA 90 bp | ATACTGGTCTTATCCTTCTCATCTAAATCATCCAGGTCTACCTCATaGCAAACCAAGGTTTCAGGCCCGATCAGAGGCATCGCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILVLSFSSKSSRSTS*QTKVSGPIRGIASS Trigger: GGAGGATGCGATGCCTCTGATCGGGCCTGAAACCTTGGTTTGCCATGAGGTAGACCTGGATGATTTAGATGAGAAGGATAAGACCAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTGGAGAACTGTTCCTTGCACCAACTGTGTaGTGTTATCCTGCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLGIYVHGSKLLWGGELFLAPTV*CYPASE Trigger: TTCTGAAGCAGGATAACACAACACAGTTGGTGCAAG...GAACAGTTCTCCACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTTTCCTCGTCCGTACTaGACCTTCACTTTGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGFPRPY*TFTLVP Trigger: GGGAACCAAAGTGAAGGTCAAGTACGGACGAGGAAA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCTCACTAGTCAGTTCTaGAAGGCCCTGGTCGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYLTSQF*KALVGL Trigger: GAGCCCGACCAGGGCCTTCAAGAACTGACTAGTGAG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTCAGCACTTGTCCGCTTaGGGGTTCGCTTTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGQHLSA*GFAFAF Trigger: AAAAGCAAAAGCGAACCCCAAAGCGGACAAGTGCTG...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | CCAAGGGCCAGATTATCCTGTCAGCTTTTACCCATTCATCATATCTaGCGTTCCATCCGTAGTAGTGCACTAGGTACAGAATCTCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRARLSCQLLPIHHI*RSIRSSALGTESPR Trigger: ACGGGGAGATTCTGTACCTAGTGCACTACTACGGATGGAACGTCAGATATGATGAATGGGTAAAAGCTGACAGGATAATCTGGCCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
||
| CDS GCA 90 bp | CATCATTGCAGCTGGGAGAGACAACCAAAGCAGGGTACCATCCAGTaGTCTCTGCTGTGGAGGCCACACTTACAACTTTTCCTAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: HHCSWERQPKQGTIQ*SLLWRPHLQLFLII Trigger: AATTATTAGGAAAAGTTGTAAGTGTGGCCTCCACAGCAGAGAGCACTGGATGGTACCCTGCTTTGGTTGTCTCTCCCAGCTGCAATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTAAGGCCCCTCGGTACTaGGCACTGACATCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFKAPRY*ALTSVP Trigger: GGGAACTGATGTCAGTGCCAAGTACCGAGGGGCCTT...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTACTGTGACGTCATCATaGCAGCTGGGAGAGACAACC | + |
|
Preference number: 5 (lower is better) Translates to: FCGCISGFGDLCPWQQTATVTSS*QLGETT Trigger: GGTTGTCTCTCCCAGCTGCAATGATGACGTCACAGT...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTTTTCCTTCTCCCTCTaGGCGACTTTAGCTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGFSFSL*ATLALC Trigger: ACACAGAGCTAAAGTCGCCAAGAGGGAGAAGGAAAA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTACTTCGGGACTCGTCTaGGCTGAGAGTGAGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFTSGLV*AESEWG Trigger: TCCCCACTCACTCTCAGCCAAGACGAGTCCCGAAGT...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCATGAAGCAGAGGACATaGACGCTCCTGCGTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FLWLYFRVWGFMSMAANCMKQRT*TLLRET Trigger: TGTCTCACGCAGGAGCGTCAATGTCCTCTGCTTCAT...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTAAAAATATGCACAATTaGATCGCTGTCCCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGKNMHN*IAVPCL Trigger: GAGGCAGGGGACAGCGATCAAATTGTGCATATTTTT...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTTTTTGGCTGCAGCACTaGTCCGCTTTGGGGTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFFWLQH*SALGFA Trigger: AGCGAACCCCAAAGCGGACAAGTGCTGCAGCCAAAA...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 90 bp | TCAATTGTAATGTCACTCTCACTCTTTATACTTCGGGACTCGTCTTaGCTGAGAGTGAGTGGGGAAGCTACGGAAAAGTTATGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIVMSLSLFILRDSS*LRVSGEATEKLCCA Trigger: AGCACAGCATAACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAAGACGAGTCCCGAAGTATAAAGAGTGAGAGTGACATTACAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCCCAAAACAGGTGGTTaGTTGATCGGAGTACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYPKTGG*LIGVPL Trigger: CAGAGGTACTCCGATCAACAAACCACCTGTTTTGGG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTGACCTCCTCCCTCTGTaGGTCTTCTTTGCAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFDLLPL*VFFAMT Trigger: AGTCATTGCAAAGAAGACCAACAGAGGGAGGAGGTC...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTTCTTTGGTCCACCTTaGTCCAAGGGCCAGATTATC | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYFFGPP*SKGQII Trigger: GATAATCTGGCCCTTGGACAAAGGTGGACCAAAGAA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 90 bp | CTGCTGTGGAGGCCACACTTACAACTTTTCCTAATAATTCGTCATTaGGACGCCTCTTATCTTCATCTTCCTCTTCGCTGCTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLWRPHLQLFLIIRH*DASYLHLPLRCFLL Trigger: AAGAAGAAAGCAGCGAAGAGGAAGATGAAGATAAGAGGCGTCTCAATGACGAATTATTAGGAAAAGTTGTAAGTGTGGCCTCCACAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
||
| CDS TCA 90 bp | GGAGAAAAGAGATTCTCTCTGTACTGTTCATATTATCTAATTCATTaGGCTGGAAGCTCCACTTGTATGTCCTGGGGGAGGAGTTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GEKRFSLYCSYYLIH*AGSSTCMSWGRSSD Trigger: ATCCGAACTCCTCCCCCAGGACATACAAGTGGAGCTTCCAGCTCAATGAATTAGATAATATGAACAGTACAGAGAGAATCTCTTTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 90 bp | TCTACAATAGCTCCAACTCTTAAAGGGCCCTTTACTTGGTCATCTTaGACCAACTGTGTTGTGTTATCCTGCTTCAGAAGTACCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: STIAPTLKGPFTWSS*TNCVVLSCFRSTLT Trigger: AGTCAAGGTACTTCTGAAGCAGGATAACACAACACAGTTGGTGCAAGATGACCAAGTAAAGGGCCCTTTAAGAGTTGGAGCTATTGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
||
| CDS GCA 90 bp | CCTTCTCCTCTTCATGTTCCTCAGCTGGGCATTCTTCGTCATCACTaGTGGAGGACTCAAGGATTTCACTTATATCCATTTTCCAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLHVPQLGILRHH*WRTQGFHLYPFSNY Trigger: ATAATTGGAAAATGGATATAAGTGAAATCCTTGAGTCCTCCAGCAGTGATGACGAAGAATGCCCAGCTGAGGAACATGAAGAGGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTGCTTCAGAAGTACCTaGACTTTCACCAGCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYCFRST*TFTSLF Trigger: GAAAAGGCTGGTGAAAGTCAAGGTACTTCTGAAGCA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | GTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTGTGGGGTTTAATCTTCTTCTCTTaGTTCTTTGGTGTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVFQGLGIYVHGSKLLWGLIFFS*FFGVLF Trigger: GAAGAGCACACCAAAGAACAAAGAGAAGAAGATTAA...ACCCCACAGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACCTTGGGACACTCCAGTaGTCATTTCCATGCCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYLGTLQ*SFPCHY Trigger: ATAATGGCATGGAAATGACAACTGGAGTGTCCCAAG...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTCAAAATGCTCTGGGTTaGTTAGAGGAAGCTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFQNALG*LEEADP Trigger: TGGATCAGCTTCCTCTAACAAACCCAGAGCATTTTG...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | TTTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTCCTCTATTTCCTTCTaGATACAGTTTGCATCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLWLYFRVWGFMSMAANCSSISF*IQFASR Trigger: TCGAGATGCAAACTGTATCAAGAAGGAAATAGAGGA...GCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTTCCTTCTGTCGATGGTaGCAACTTCAGACTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFSFCRW*QLQTSK Trigger: CTTTGAAGTCTGAAGTTGCAACCATCGACAGAAGGA...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGTCTGTTGTGTGCGCTTGTCTATGATTTCTAGAACACTTGAAAGCTTTCTTTACTTGGTCATCTaGCACCAACTGTGTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPVCCVRLSMISRTLESFLYLVI*HQLCCV Trigger: AACACAACACAGTTGGTGCAAGATGACCAAGTAAAG...AAAGCTTTCAAGTGTTCTAGAAATCATAGACAAGCGCACACAACAGACAGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACAAACTTATAAAGCTGTaGGAGGAAATTGTCCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYKLIKL*EEIVPL Trigger: GAGAGGGACAATTTCCTCCAACAGCTTTATAAGTTT...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACAAGGTCCATATAAATTaGCTTCCATACAGCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYKVHIN*LPYSTT Trigger: AGTGGTGCTGTATGGAAGCAAATTTATATGGACCTT...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTTTAGAGCTTCGTCCATaGAGTCTTCAAAGTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FCGCISGFGDLCPWQQTALELRP*SLQSLF Trigger: AAAAAGACTTTGAAGACTCAATGGACGAAGCTCTAA...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGAGGAGGGTCTAGATACAATCCTGGAAACTATACAGGAAGGATATACTCTACTTGGTCCACTTaGTCTCCAAAAATATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KERGGSRYNPGNYTGRIYSTWST*SPKICT Trigger: TGTGCATATTTTTGGAGACAAAGTGGACCAAGTAGA...GTATATCCTTCCTGTATAGTTTCCAGGATTGTATCTAGACCCTCCTCTCTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS-3UTR CAA 90 bp | TTCTGTGGTTGTATTTCAGGGTTTGGGGATTTATGTCCATGGCAGCAAACTGCTCTTAAATTCTTCTACTaGGTCCACTTTGTCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FCGCISGFGDLCPWQQTALKFFY*VHFVSK Trigger: TTTGGAGACAAAGTGGACCAAGTAGAAGAATTTAAG...AGCAGTTTGCTGCCATGGACATAAATCCCCAAACCCTGAAATACAACCACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CCA 90 bp | ACAGTATACCAACTAGCATCTGTCAATTTGCTGATAATAGCTTCCTaGATAGATCCATCAGATGTCCTTGTTTCTACAATAGCTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TVYQLASVNLLIIAS*IDPSDVLVSTIAPT Trigger: AGTTGGAGCTATTGTAGAAACAAGGACATCTGATGGATCTATCCAGGAAGCTATTATCAGCAAATTGACAGATGCTAGTTGGTATACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CCA 72 bp | GGCGCTTCACTGGGGTGCAGTTACTGGAGCTGTCCATaGCGGGGAGGTCCTCGCTGTCACTGCTCTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GASLGCSYWSCP*RGGPRCHCSVL Trigger: CAGGACAGAGCAGTGACAGCGAGGACCTCCCCGCCATGGACAGCTCCAGTAACTGCACCCCAGTGAAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | AGGCGAGGTTCTTGCAGGAGACCGTGGCAGCTTCTGTaGCTTGGGCAGGGTAAGGCGCTTCACTGGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRGSCRRPWQLL*LGQGKALHWGA Trigger: TGCACCCCAGTGAAGCGCCTTACCCTGCCCAAGTCACAGAAGCTGCCACGGTCTCCTGCAAGAACCTCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | CAGGCCCGATCAGAGGCATCGCATCCTCCTCTTCTTTaGGTGGCGTGTGCACCGGTTCTTCTTCGGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QARSEASHPPLL*VACAPVLLRLD Trigger: GTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS GCA 72 bp | CCCTTCACCTTCTGTTTCAAAGTGCTGTTCCACGTGTaGGCCTTTCATGCCCTCGGCTCCCGCGCCATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PFTFCFKVLFHV*AFHALGSRAIV Trigger: GACGATGGCGCGGGAGCCGAGGGCATGAAAGGCGCACACGTGGAACAGCACTTTGAAACAGAAGGTGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 90 bp | CGGTTCTTCTTCGGCTGGACTGTCCGATTTCTCACTAGTCAGTTCTaGAAGGCCCTGGTCGGGCTCGGCTGTCAGCGATGGCATCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RFFFGWTVRFLTSQF*KALVGLGCQRWHPF Trigger: GAAGGGATGCCATCGCTGACAGCCGAGCCCGACCAGGGCCTTCAAGAACTGACTAGTGAGAAATCGGACAGTCCAGCCGAAGAAGAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CCA 72 bp | CCCGATCAGAGGCATCGCATCCTCCTCTTCTTTGAGTaGCGTGTGCACCGGTTCTTCTTCGGCTGGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PDQRHRILLFFE*RVHRFFFGWTV Trigger: GACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | TTCGGCTGGACTGTCCGATTTCTCACTAGTCAGTTCTaGAAGGCCCTGGTCGGGCTCGGCTGTCAGCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: FGWTVRFLTSQF*KALVGLGCQRW Trigger: CCATCGCTGACAGCCGAGCCCGACCAGGGCCTTCAAGAACTGACTAGTGAGAAATCGGACAGTCCAGCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | TCAGGCCCGATCAGAGGCATCGCATCCTCCTCTTCTTaGAGTGGCGTGTGCACCGGTTCTTCTTCGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGPIRGIASSSS*SGVCTGSSSAG Trigger: TCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 90 bp | ACCAAGGTTTCAGGCCCGATCAGAGGCATCGCATCCTCCTCTTCTTaGAGTGGCGTGTGCACCGGTTCTTCTTCGGCTGGACTGTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: TKVSGPIRGIASSSS*SGVCTGSSSAGLSD Trigger: ATCGGACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAAGAGGAGGATGCGATGCCTCTGATCGGGCCTGAAACCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS GCA 72 bp | TTCTTTGGTGTGCTCTTCCTCCCGAACAGCAGCTCATaGTCTCTCTTCGCTGCTGGGTCGCCATCGTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: FFGVLFLPNSSS*SLFAAGSPSSS Trigger: CGATGACGATGGCGACCCAGCAGCGAAGAGAGAGCATGAGCTGCTGTTCGGGAGGAAGAGCACACCAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CAA 72 bp | CATGCCCTCGGCTCCCGCGCCATCGTCAGACCTCTCTaGGGACACTCCAGTTGTCATTTCCATGCCATTATC | + |
|
Preference number: 6 (lower is better) Translates to: HALGSRAIVRPL*GHSSCHFHAII Trigger: GATAATGGCATGGAAATGACAACTGGAGTGTCCCAAGAGAGGTCTGACGATGGCGCGGGAGCCGAGGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | TCTTTGCCTCACAGAAGGCCCCTCGGTACTTGGCACTaGCATCAGTTCCCACTGTCAGGTAGGCAGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLPHRRPLGTWH*HQFPLSGRQAH Trigger: ATGAGCCTGCCTACCTGACAGTGGGAACTGATGTCAGTGCCAAGTACCGAGGGGCCTTCTGTGAGGCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CCA 72 bp | ATGCCCTCGGCTCCCGCGCCATCGTCAGACCTCTCTTaGGACACTCCAGTTGTCATTTCCATGCCATTATCA | + |
|
Preference number: 6 (lower is better) Translates to: MPSAPAPSSDLS*DTPVVISMPLS Trigger: TGATAATGGCATGGAAATGACAACTGGAGTGTCCCAAGAGAGGTCTGACGATGGCGCGGGAGCCGAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CCA 72 bp | TTCTTGAAGGCCCTGGTCGGGCTCGGCTGTCAGCGATaGCATCCCTTCACCTTCTGTTTCAAAGTGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLKALVGLGCQR*HPFTFCFKVLF Trigger: GAACAGCACTTTGAAACAGAAGGTGAAGGGATGCCATCGCTGACAGCCGAGCCCGACCAGGGCCTTCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CAA 90 bp | TGCGCCTTTCATGCCCTCGGCTCCCGCGCCATCGTCAGACCTCTCTaGGGACACTCCAGTTGTCATTTCCATGCCATTATCAAGTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CAFHALGSRAIVRPL*GHSSCHFHAIIKSQ Trigger: TTGAGACTTGATAATGGCATGGAAATGACAACTGGAGTGTCCCAAGAGAGGTCTGACGATGGCGCGGGAGCCGAGGGCATGAAAGGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 72 bp | TTCTCTCGGTGCTTCTCCTTCTCTGCATCTTTGATGTaGGGCGAGGTTCTTGCAGGAGACCGTGGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSRCFSFSASLM*GEVLAGDRGSF Trigger: GAAGCTGCCACGGTCTCCTGCAAGAACCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCGAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS TCA 72 bp | GATGCTTCTCTCGGTGCTTCTCCTTCTCTGCATCTTTaGTGTGAGGCGAGGTTCTTGCAGGAGACCGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DASLGASPSLHL*CEARFLQETVA Trigger: TGCCACGGTCTCCTGCAAGAACCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCGAGAGAAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 72 bp | AGCTGGGAGAGACAACCAAAGCAGGGTACCATCCAGTaGTCTCTGCTGTGGAGGCCACACTTACAACTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWERQPKQGTIQ*SLLWRPHLQLF Trigger: GAAAAGTTGTAAGTGTGGCCTCCACAGCAGAGAGCACTGGATGGTACCCTGCTTTGGTTGTCTCTCCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
||
| CDS GCA 72 bp | TGGCTGAGAGTGAGTGGGGAAGCTACGGAAAAGTTATaGTGTGCTACAGGAGGTAAGGCAGGTGGTACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WLRVSGEATEKL*CATGGKAGGTE Trigger: TTCCGTACCACCTGCCTTACCTCCTGTAGCACAGCATAACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS GCA 72 bp | AAGCTCCACTTGTATGTCCTGGGGGAGGAGTTCGGATaGTTCTCTCGGTGCTTCTCCTTCTCTGCATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KLHLYVLGEEFG*FSRCFSFSASL Trigger: CAAAGATGCAGAGAAGGAGAAGCACCGAGAGAAGCATCCGAACTCCTCCCCCAGGACATACAAGTGGAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CCA 72 bp | GGAGAAAGATCTTCACCCCCTGAGCTCTTCTCCAGCTaGTCGTCTGCCTCACTATCAGATGAACAGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GERSSPPELFSS*SSASLSDEQES Trigger: AGACTCCTGTTCATCTGATAGTGAGGCAGACGACCAGCTGGAGAAGAGCTCAGGGGGTGAAGATCTTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
||
| CDS CCA 72 bp | CGTGTGCAATTATACTACAGGCACCAGAGGCAACACTaGCTTCAAACCCGTTCGCCGATTCCCTCTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVQLYYRHQRQH*LQTRSPIPSHR Trigger: TCTGTGAGAGGGAATCGGCGAACGGGTTTGAAGCCAGTGTTGCCTCTGGTGCCTGTAGTATAATTGCACACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
||
| CDS CAA 90 bp | CTCTTGGCGACTTTAGCTCTGTGTCTTCTCTGTCGCTTTCACTGTTaGAGTCCGTATTCTCCTCGGGCTCACTCTTCACGTCCAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLATLALCLLCRFHC*SPYSPRAHSSRPAK Trigger: CTTTGCTGGACGTGAAGAGTGAGCCCGAGGAGAATACGGACTCAAACAGTGAAAGCGACAGAGAAGACACAGAGCTAAAGTCGCCAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
||
| CDS GCA 72 bp | AAAACTCCAGGCTATGAACGTCCCCATGAGCTTCGCTaGCTGCTTCCTCCTGGCCGAAAGGTGAAATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: KTPGYERPHELR*LLPPGRKVKSL Trigger: TAAAGATTTCACCTTTCGGCCAGGAGGAAGCAGGCAGCGAAGCTCATGGGGACGTTCATAGCCTGGAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
||
| CDS CAA 90 bp | TCCTCAGGATCAAGCTCTTCCTCAGGCAGCTCTTCTTCCTCCTTTTaGGCCTCTTTTTCCTTCTCCTCTTCATGTTCCTCAGCTGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSGSSSSSGSSSSSF*ASFSFSSSCSSAGH Trigger: ATGCCCAGCTGAGGAACATGAAGAGGAGAAGGAAAAAGAGGCCAAAAAGGAGGAAGAAGAGCTGCCTGAGGAAGAGCTTGATCCTGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | TTCTTCTTTGACATCAGGAGAAAGATCTTCACCCCCTaGGCTCTTCTCCAGCTGGTCGTCTGCCTCACTATC | + |
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Preference number: 6 (lower is better) Translates to: FFFDIRRKIFTP*ALLQLVVCLTI Trigger: GATAGTGAGGCAGACGACCAGCTGGAGAAGAGCTCAGGGGGTGAAGATCTTTCTCCTGATGTCAAAGAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CCA 72 bp | TTCTTTGAGTGGCGTGTGCACCGGTTCTTCTTCGGCTaGACTGTCCGATTTCTCACTAGTCAGTTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FFEWRVHRFFFG*TVRFLTSQFLK Trigger: CTTCAAGAACTGACTAGTGAGAAATCGGACAGTCCAGCCGAAGAAGAACCGGTGCACACGCCACTCAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CCA 72 bp | CTTTATACTTCGGGACTCGTCTTGGCTGAGAGTGAGTaGGGAAGCTACGGAAAAGTTATGCTGTGCTACAGG | + |
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Preference number: 6 (lower is better) Translates to: LYTSGLVLAESE*GSYGKVMLCYR Trigger: CCTGTAGCACAGCATAACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAAGACGAGTCCCGAAGTATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | TACTTGGTCCACTTTGTCTCCAAAAATATGCACAATTaGATCGCTGTCCCCTGCCTCCACCGTCAGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: YLVHFVSKNMHN*IAVPCLHRQGV Trigger: GACACCCTGACGGTGGAGGCAGGGGACAGCGATCAAATTGTGCATATTTTTGGAGACAAAGTGGACCAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CAA 72 bp | AAGGGCTCATTCCAGTGTCTGATGAAGCAGAGGACATaGACGCTCCTGCGTGAGACACTTCTCTGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KGSFQCLMKQRT*TLLRETLLCLS Trigger: AGAAAGACAGAGAAGTGTCTCACGCAGGAGCGTCAATGTCCTCTGCTTCATCAGACACTGGAATGAGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | CCCGTTCGCCGATTCCCTCTCACAGAGGCCTTCTTGTaGTTCTTCGGCGATGCTATCAACTTCAATTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: PVRRFPLTEAFL*FFGDAINFNCN Trigger: ATTACAATTGAAGTTGATAGCATCGCCGAAGAATCACAAGAAGGCCTCTGTGAGAGGGAATCGGCGAACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | ACTTTAGCTCTGTGTCTTCTCTGTCGCTTTCACTGTTaGAGTCCGTATTCTCCTCGGGCTCACTCTTCACGT | + |
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Preference number: 6 (lower is better) Translates to: TLALCLLCRFHC*SPYSPRAHSSR Trigger: ACGTGAAGAGTGAGCCCGAGGAGAATACGGACTCAAACAGTGAAAGCGACAGAGAAGACACAGAGCTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CAA 90 bp | TCTGTACTGTTCATATTATCTAATTCATTGAGCTGGAAGCTCCACTaGTATGTCCTGGGGGAGGAGTTCGGATGCTTCTCTCGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVLFILSNSLSWKLH*YVLGEEFGCFSRCF Trigger: GAAGCACCGAGAGAAGCATCCGAACTCCTCCCCCAGGACATACAAGTGGAGCTTCCAGCTCAATGAATTAGATAATATGAACAGTACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | CTTCATAAATTTTCTGAGTTTTTCCTCGTCCGTACTTaGCCTTCACTTTGGTTCCCGTCAGGCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LHKFSEFFLVRT*PSLWFPSGRAL Trigger: CAGAGCCCTGCCTGACGGGAACCAAAGTGAAGGTCAAGTACGGACGAGGAAAAACTCAGAAAATTTATGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CCA 72 bp | CAACCAAAGCAGGGTACCATCCAGTGCTCTCTGCTGTaGAGGCCACACTTACAACTTTTCCTAATAATTCGT | + |
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Preference number: 6 (lower is better) Translates to: QPKQGTIQCSLL*RPHLQLFLIIR Trigger: ACGAATTATTAGGAAAAGTTGTAAGTGTGGCCTCCACAGCAGAGAGCACTGGATGGTACCCTGCTTTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CCA 72 bp | TTATCCTTCTCATCTAAATCATCCAGGTCTACCTCATaGCAAACCAAGGTTTCAGGCCCGATCAGAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LSFSSKSSRSTS*QTKVSGPIRGI Trigger: GATGCCTCTGATCGGGCCTGAAACCTTGGTTTGCCATGAGGTAGACCTGGATGATTTAGATGAGAAGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CCA 72 bp | ATGTCACTCTCACTCTTTATACTTCGGGACTCGTCTTaGCTGAGAGTGAGTGGGGAAGCTACGGAAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: MSLSLFILRDSS*LRVSGEATEKL Trigger: TAACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAAGACGAGTCCCGAAGTATAAAGAGTGAGAGTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | CCGCGCCATCGTCAGACCTCTCTTGGGACACTCCAGTaGTCATTTCCATGCCATTATCAAGTCTCAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: PRHRQTSLGTLQ*SFPCHYQVSIF Trigger: AAAAATTGAGACTTGATAATGGCATGGAAATGACAACTGGAGTGTCCCAAGAGAGGTCTGACGATGGCGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | AATGTCACTCTCACTCTTTATACTTCGGGACTCGTCTaGGCTGAGAGTGAGTGGGGAAGCTACGGAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: NVTLTLYTSGLV*AESEWGSYGKV Trigger: AACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAAGACGAGTCCCGAAGTATAAAGAGTGAGAGTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 90 bp | TTCAATTGTAATGTCACTCTCACTCTTTATACTTCGGGACTCGTCTaGGCTGAGAGTGAGTGGGGAAGCTACGGAAAAGTTATGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: FNCNVTLTLYTSGLV*AESEWGSYGKVMLC Trigger: GCACAGCATAACTTTTCCGTAGCTTCCCCACTCACTCTCAGCCAAGACGAGTCCCGAAGTATAAAGAGTGAGAGTGACATTACAATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | CTCTTCCCTCTCTTGGCTCTTCTCTTCCTCTTCATCTaGGTCTCTCTCAGAGTCCTCTGGCTTTTTAATCTT | + |
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Preference number: 6 (lower is better) Translates to: LFPLLALLFLFI*VSLRVLWLFNL Trigger: AAGATTAAAAAGCCAGAGGACTCTGAGAGAGACTCAGATGAAGAGGAAGAGAAGAGCCAAGAGAGGGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS GCA 72 bp | GCTCCAACTCTTAAAGGGCCCTTTACTTGGTCATCTTaGACCAACTGTGTTGTGTTATCCTGCTTCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: APTLKGPFTWSS*TNCVVLSCFRS Trigger: ACTTCTGAAGCAGGATAACACAACACAGTTGGTGCAAGATGACCAAGTAAAGGGCCCTTTAAGAGTTGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CCA 72 bp | CATGTTCCTCAGCTGGGCATTCTTCGTCATCACTGCTaGAGGACTCAAGGATTTCACTTATATCCATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HVPQLGILRHHC*RTQGFHLYPFS Trigger: GGAAAATGGATATAAGTGAAATCCTTGAGTCCTCCAGCAGTGATGACGAAGAATGCCCAGCTGAGGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CAA 90 bp | AGTTCTAACGAAAGGTCTTTTGTCTTGCTGCGCCTTCCCTTCCCTTaGGGAGACTTTTCCACCTGTTTCTTAAATTCTTCTACTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSNERSFVLLRLPFP*GDFSTCFLNSSTWS Trigger: GGACCAAGTAGAAGAATTTAAGAAACAGGTGGAAAAGTCTCCCAAAGGGAAGGGAAGGCGCAGCAAGACAAAAGACCTTTCGTTAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS GCA 72 bp | ACTTGGTCATCTTGCACCAACTGTGTTGTGTTATCCTaGTTCAGAAGTACCTTGACTTTCACCAGCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TWSSCTNCVVLS*FRSTLTFTSLF Trigger: GAAAAGGCTGGTGAAAGTCAAGGTACTTCTGAAGCAGGATAACACAACACAGTTGGTGCAAGATGACCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CCA 72 bp | TCTACAATAGCTCCAACTCTTAAAGGGCCCTTTACTTaGTCATCTTGCACCAACTGTGTTGTGTTATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: STIAPTLKGPFT*SSCTNCVVLSC Trigger: GCAGGATAACACAACACAGTTGGTGCAAGATGACCAAGTAAAGGGCCCTTTAAGAGTTGGAGCTATTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CAA 72 bp | GAAAGGTCTTTTGTCTTGCTGCGCCTTCCCTTCCCTTaGGGAGACTTTTCCACCTGTTTCTTAAATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ERSFVLLRLPFP*GDFSTCFLNSS Trigger: AGAAGAATTTAAGAAACAGGTGGAAAAGTCTCCCAAAGGGAAGGGAAGGCGCAGCAAGACAAAAGACCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CAA 72 bp | TTCATATTATCTAATTCATTGAGCTGGAAGCTCCACTaGTATGTCCTGGGGGAGGAGTTCGGATGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FILSNSLSWKLH*YVLGEEFGCFS Trigger: AGAGAAGCATCCGAACTCCTCCCCCAGGACATACAAGTGGAGCTTCCAGCTCAATGAATTAGATAATATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 90 bp | TCTGCTGTGGAGGCCACACTTACAACTTTTCCTAATAATTCGTCATaGAGACGCCTCTTATCTTCATCTTCCTCTTCGCTGCTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SAVEATLTTFPNNSS*RRLLSSSSSSLLSS Trigger: AGAAGAAAGCAGCGAAGAGGAAGATGAAGATAAGAGGCGTCTCAATGACGAATTATTAGGAAAAGTTGTAAGTGTGGCCTCCACAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS TCA 72 bp | AGATTCTCTCTGTACTGTTCATATTATCTAATTCATTaGGCTGGAAGCTCCACTTGTATGTCCTGGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RFSLYCSYYLIH*AGSSTCMSWGR Trigger: CCTCCCCCAGGACATACAAGTGGAGCTTCCAGCTCAATGAATTAGATAATATGAACAGTACAGAGAGAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CAA 72 bp | GAGATTCTCTCTGTACTGTTCATATTATCTAATTCATaGAGCTGGAAGCTCCACTTGTATGTCCTGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: EILSVLFILSNS*SWKLHLYVLGE Trigger: CTCCCCCAGGACATACAAGTGGAGCTTCCAGCTCAATGAATTAGATAATATGAACAGTACAGAGAGAATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS TCA 72 bp | AGATTATCCTGTCAGCTTTTACCCATTCATCATATCTaGCGTTCCATCCGTAGTAGTGCACTAGGTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: RLSCQLLPIHHI*RSIRSSALGTE Trigger: TTCTGTACCTAGTGCACTACTACGGATGGAACGTCAGATATGATGAATGGGTAAAAGCTGACAGGATAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CAA 90 bp | CTTCCCTTTGGGAGACTTTTCCACCTGTTTCTTAAATTCTTCTACTaGGTCCACTTTGTCTCCAAAAATATGCACAATTTGATCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LPFGRLFHLFLKFFY*VHFVSKNMHNLIAV Trigger: GACAGCGATCAAATTGTGCATATTTTTGGAGACAAAGTGGACCAAGTAGAAGAATTTAAGAAACAGGTGGAAAAGTCTCCCAAAGGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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| CDS CCA 72 bp | TTTGAAGAGATTGAGATCTTTATAGCCCAAAACAGGTaGTTTGTTGATCGGAGTACCTCTGTCTTCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: FEEIEIFIAQNR*FVDRSTSVFHK Trigger: TTTATGGAAGACAGAGGTACTCCGATCAACAAACCACCTGTTTTGGGCTATAAAGATCTCAATCTCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046305.12 |
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| CDS CCA 72 bp | CAACTAGCATCTGTCAATTTGCTGATAATAGCTTCCTaGATAGATCCATCAGATGTCCTTGTTTCTACAATA | + |
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Preference number: 6 (lower is better) Translates to: QLASVNLLIIAS*IDPSDVLVSTI Trigger: TATTGTAGAAACAAGGACATCTGATGGATCTATCCAGGAAGCTATTATCAGCAAATTGACAGATGCTAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000125125.2 |
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| CDS CAA 72 bp | GGGAGACTTTTCCACCTGTTTCTTAAATTCTTCTACTaGGTCCACTTTGTCTCCAAAAATATGCACAATTTG | + |
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Preference number: 6 (lower is better) Translates to: GRLFHLFLKFFY*VHFVSKNMHNL Trigger: CAAATTGTGCATATTTTTGGAGACAAAGTGGACCAAGTAGAAGAATTTAAGAAACAGGTGGAAAAGTCTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046305.12 ENSMUST00000135709.2 |
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