Pregenerated sensors for ARID3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004661Ensembl transcript IDs: ENSMUST00000004780.16, ENSMUST00000098686.4, ENSMUST00000114165.9, ENSMUST00000164010.8, ENSMUST00000164035.8, ENSMUST00000171444.8, ENSMUST00000171949.2
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGATCCCTGAGTCACCCCACCTGCTACACCCCCTGGCCAGGGCATaGGCAGGGTGGAGGGAGGTGGCTGCAAACTGCACCTGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: MIPESPHLLHPLARA*AGWREVAANCTWLG Trigger: CCCCAGCCAGGTGCAGTTTGCAGCCACCTCCCTCCACCCTGCCCATGCCCTGGCCAGGGGGTGTAGCAGGTGGGGTGACTCAGGGATCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR CCA 90 bp | TGGCCACGTGGCCTTCAGGACTATACCTGCGGGGGAAGCGCCACTTaGGCCAAAGCCCTAGTGCTGGGCACACAAGGCACCCAGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: WPRGLQDYTCGGSAT*AKALVLGTQGTQLL Trigger: CAAGAGCTGGGTGCCTTGTGTGCCCAGCACTAGGGCTTTGGCCCAAGTGGCGCTTCCCCCGCAGGTATAGTCCTGAAGGCCACGTGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR CCA 90 bp | GGCTCAGGCCTCTCCGAGGGCAGTGAAGGCAATGGGAAGGAGGGCTaGAAAGGGTGTTTCCTGGGCCAGGTGGTCAGAAGGTACCTACTG | + |
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Preference number: 1 (lower is better) Translates to: GSGLSEGSEGNGKEG*KGCFLGQVVRRYLL Trigger: CAGTAGGTACCTTCTGACCACCTGGCCCAGGAAACACCCTTTCCAGCCCTCCTTCCCATTGCCTTCACTGCCCTCGGAGAGGCCTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR GCA 90 bp | GTTCCTGAAGCTCAGCCTCAGGCAGGGCCCATAGCCATTTGCCTCTaGCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: VPEAQPQAGPIAICL*PKVRVLKAERSSAL Trigger: TAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGCTTCAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR CCA 90 bp | TCAGTGAGCCTGACATCACCATGTCTTGGGCTGGTAGGGCTGAGATaGCCCCACGAGACGACGTTAGGGACCAGGGACCAGTGGTATCTT | + |
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Preference number: 1 (lower is better) Translates to: SVSLTSPCLGLVGLR*PHETTLGTRDQWYL Trigger: AAGATACCACTGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCTCAGCCCTACCAGCCCAAGACATGGTGATGTCAGGCTCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR TCA 90 bp | GCTGCATGCCAACAGAAGACAGAGCTCTTAGCATCCTCTTGTTCCTaGAGCTCAGCCTCAGGCAGGGCCCATAGCCATTTGCCTCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: AACQQKTELLASSCS*SSASGRAHSHLPLP Trigger: GGGCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGCTTCAGGAACAAGAGGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR GCA 90 bp | CCTCTTGTTCCTGAAGCTCAGCCTCAGGCAGGGCCCATAGCCATTTaGCTCTGCCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCT | + |
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Preference number: 1 (lower is better) Translates to: PLVPEAQPQAGPIAI*LCPKVRVLKAERSS Trigger: AGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGCTTCAGGAACAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR TCA 90 bp | GGTTCCTTCTGTCCATCATCCGAGAGGGCTGTCTACTTGGGGATCTaGGGGCTCCTTTCACTCTGCCTCCCTTCTCAGCACACAACTGTC | + |
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Preference number: 1 (lower is better) Translates to: GSFCPSSERAVYLGI*GLLSLCLPSQHTTV Trigger: GACAGTTGTGTGCTGAGAAGGGAGGCAGAGTGAAAGGAGCCCTCAGATCCCCAAGTAGACAGCCCTCTCGGATGATGGACAGAAGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR TCA 90 bp | AGGGGACAGCAGGCCAACCCTAACAGAGTACCCACTATACTGAAGTaGTCTGAAAACCTGCCCTGGCCACAAACTGCCCTGGTGTACCTG | + |
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Preference number: 1 (lower is better) Translates to: RGQQANPNRVPTILK*SENLPWPQTALVYL Trigger: CAGGTACACCAGGGCAGTTTGTGGCCAGGGCAGGTTTTCAGATCACTTCAGTATAGTGGGTACTCTGTTAGGGTTGGCCTGCTGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR TCA 90 bp | GAGGGACAGGGGAACAAGCTGCCTGAGGAAAGAGTATTTGATGACTaGAAAGTCTTGCAGCACTGTCCCTGTCACCCCTGGGTAGGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: EGQGNKLPEERVFDD*KVLQHCPCHPWVGR Trigger: CCTTCCTACCCAGGGGTGACAGGGACAGTGCTGCAAGACTTTTCAGTCATCAAATACTCTTTCCTCAGGCAGCTTGTTCCCCTGTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR GCA 90 bp | ACTGAGTGTGTGTGTCCTGGGGCAGGGATAAGACCAAGTCAGCAGTaGTGTGCTCGCCAGGCTGAGGTATGTTTGTGCATAAGCTTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: TECVCPGAGIRPSQQ*CARQAEVCLCISFS Trigger: GGAAAAGCTTATGCACAAACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCCAGGACACACACACTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR GCA 90 bp | CTCCTTTCACTCTGCCTCCCTTCTCAGCACACAACTGTCTGTGTTTaGTCGACAAAGAATGATAGCAACCACGGCACAGACAGGGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: LLSLCLPSQHTTVCV*STKNDSNHGTDRGL Trigger: AAGCCCCCTGTCTGTGCCGTGGTTGCTATCATTCTTTGTCGAGCAAACACAGACAGTTGTGTGCTGAGAAGGGAGGCAGAGTGAAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR TCA 90 bp | CTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTATGACTAAATCCTaGGACACACTGGCCAAACAGGCTTCTCATAGCACCAGACCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LSPLGRKGLSFMTKS*DTLAKQASHSTRPL Trigger: AAGGGGTCTGGTGCTATGAGAAGCCTGTTTGGCCAGTGTGTCTCAGGATTTAGTCATAAAGGATAGACCCTTCCTACCCAGGGGTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR TCA 90 bp | CAGCACTGTCCCTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTATaGCTAAATCCTGAGACACACTGGCCAAACAGGCTTCTCATAGCA | + |
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Preference number: 1 (lower is better) Translates to: QHCPCHPWVGRVYPL*LNPETHWPNRLLIA Trigger: TGCTATGAGAAGCCTGTTTGGCCAGTGTGTCTCAGGATTTAGTCATAAAGGATAGACCCTTCCTACCCAGGGGTGACAGGGACAGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR GCA 90 bp | CTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTaGATGCCAACAGAAGACAGAGCTCTTAGCATCCTCTTGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LDKVYPFSTTVACSS*MPTEDRALSILLFL Trigger: CAGGAACAAGAGGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR TCA 90 bp | TTGGACAACGCTACTCTGTCCTGCCCCCTAGAATACAGCAGAACCTaGATGGAGCTTGGCCAGACGGACTCTTCCAAATTTAACATCTGG | + |
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Preference number: 1 (lower is better) Translates to: LDNATLSCPLEYSRT*MELGQTDSSKFNIW Trigger: CCAGATGTTAAATTTGGAAGAGTCCGTCTGGCCAAGCTCCATTCAGGTTCTGCTGTATTCTAGGGGGCAGGACAGAGTAGCGTTGTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
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| 3UTR CCA 90 bp | CAAGCTTCCTGCTGTCATCTGGTGCTGCTTAGTCATGCCCATCTATaGTCTAATACTGTCTCATCTCTGCCATCTGTCTCTACTACCTCT | + |
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Preference number: 1 (lower is better) Translates to: QASCCHLVLLSHAHL*SNTVSSLPSVSTTS Trigger: AGAGGTAGTAGAGACAGATGGCAGAGATGAGACAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR GCA 90 bp | ACAGAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTGCTaGTTAGTCATGCCCATCTATGGTCTAATACTGTCTCATCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: TEKADIVKLPAVIWC*LVMPIYGLILSHLC Trigger: GCAGAGATGAGACAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR GCA 90 bp | CAGACAGAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTaGTGCTTAGTCATGCCCATCTATGGTCTAATACTGTCTCATCTC | + |
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Preference number: 1 (lower is better) Translates to: QTEKADIVKLPAVIW*CLVMPIYGLILSHL Trigger: GAGATGAGACAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR CCA 90 bp | AGTCAGACAGAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTaGTGCTGCTTAGTCATGCCCATCTATGGTCTAATACTGTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SQTEKADIVKLPAVI*CCLVMPIYGLILSH Trigger: ATGAGACAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTCTGTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCCATCCTCCTGCTGTGATGCTGAGTCACCCCACCTaGTACACCCCCTGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FRSHQQAGVPPPHPPAVMLSHPT*YTPWPG Trigger: CCCTGGCCAGGGGGTGTAGCAGGTGGGGTGACTCAG...CATCACAGCAGGAGGATGGGGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATTCCAGGCGCTCCCTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTCACAGCCAGGCGATTTaGCACAGGCACTGGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: LIPGAPLGAPVGQAGCQPHSQAI*HRHWDS Trigger: GGAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTG...AGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCTGGAATCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
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| 3UTR-3UTR TCA 90 bp | GACGAGAGAAGGGCGGGGGTCCCAGCAGAGGCAGCACTAGCAGCAGCGGCGGCGCTGTTGTGGGCTCCATaGGGTGAGGTAAATTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DERRAGVPAEAALAAAAALLWAP*GEVNSV Trigger: CACAGAATTTACCTCACCTCATGGAGCCCACAACAG...CGCCGCCGCTGCTGCTAGTGCTGCCTCTGCTGGGACCCCCGCCCTTCTCTCGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
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| 3UTR CAA 90 bp | ATGGCCACGTGGCCTTCAGGACTATACCTGCGGGGGAAGCGCCACTaGGGCCAAAGCCCTAGTGCTGGGCACACAAGGCACCCAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: MATWPSGLYLRGKRH*GQSPSAGHTRHPAL Trigger: AAGAGCTGGGTGCCTTGTGTGCCCAGCACTAGGGCTTTGGCCCAAGTGGCGCTTCCCCCGCAGGTATAGTCCTGAAGGCCACGTGGCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCCCCGTGGGGCGGCTGGCACATGGGACTTCTCACTCTGCAGAGTCAAACCACAGACAGGGGGCTTaGAAGGGAGTGCAGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SCPVGRLAHGTSHSAESNHRQGA*KGVQCR Trigger: CCTGCACTGCACTCCCTTTCAAGCCCCCTGTCTGTG...GTTTGACTCTGCAGAGTGAGAAGTCCCATGTGCCAGCCGCCCCACGGGGCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGCGGATCTTGGGGGACGAGAGAAGGGCGGGGGTCCCAGCAGAGGCAGCAGACCTTCCCTACGGTTaGCATCGATGGCTGCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: EKRILGDERRAGVPAEAADLPYG*HRWLPV Trigger: TACAGGCAGCCATCGATGGCAACCGTAGGGAAGGTC...TGCTGCCTCTGCTGGGACCCCCGCCCTTCTCTCGTCCCCCAAGATCCGCTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
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| 3UTR-3UTR GCA 90 bp | TCCGGCAGCAGAGCCAGGCTAACCAACTTCCGTCATTCCCTGACTCTCAGAGTGAGGCGCTCCCTTAGGTaGTCCAGTGGGCCAGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: SGSRARLTNFRHSLTLRVRRSLR*SSGPGR Trigger: CCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCT...CACTCTGAGAGTCAGGGAATGACGGAAGTTGGTTAGCCTGGCTCTGCTGCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTGTGGAGGGAGGTGGCTaGAAACTGCACCTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GAGIRPSQQCCARQAEVCVEGGG*KLHLAG Trigger: CCCAGCCAGGTGCAGTTTGCAGCCACCTCCCTCCAC...ACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGTTCCTGAAGCTCAGCCTCAGGCAGGGCCCATAGCCATTTGCCTCTGCCCCTACCCTGACAGCTaGGGTAGGGGCGGTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PLVPEAQPQAGPIAICLCPYPDS*GRGGGK Trigger: CTTTCCACCGCCCCTACCCCAGCTGTCAGGGTAGGG...GCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGCTTCAGGAACAAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCATGCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCCTGGTGGGTCTGGGTGGCAGAAAGATCCTCTaGCCTACCCTGACAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GHAVVSTATARVVLVGLGGRKIL*PTLTAG Trigger: CCCAGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCC...ACCCAGACCCACCAGGACTACTCTGGCTGTAGCAGTGGAGACCACAGCATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCCCCGTGGGGCGGCTGGCACATGGGACTTCTCACTCTGCAGAGTCAAACTTTCCTGAGAGTAGATaGCGGGGGTATCCGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SCPVGRLAHGTSHSAESNFPESR*RGYPRA Trigger: AGCCCTCGGATACCCCCGGCATCTACTCTCAGGAAA...GTTTGACTCTGCAGAGTGAGAAGTCCCATGTGCCAGCCGCCCCACGGGGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCATGCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCCTGGTGGGTCTGGGTGTGGTTGGGGAACCCTaGGAAAGCTGGATGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GHAVVSTATARVVLVGLGVVGEP*ESWMPR Trigger: TCTGGGCATCCAGCTTTCCCAGGGTTCCCCAACCAC...ACCCAGACCCACCAGGACTACTCTGGCTGTAGCAGTGGAGACCACAGCATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGGTAGGGCTGAGATGGCCCCACGAGACGACGTTAGGGACCAGGGACCAGTCGATATACTACTCTaGGTTGGGAGGTGGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: WAGRAEMAPRDDVRDQGPVDILL*VGRWLG Trigger: CCCCAACCACCTCCCAACCCAGAGTAGTATATCGAC...TGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCTCAGCCCTACCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCCCGTGGGGCGGCTGGCACATGGGACTTCTCACTCTGCAGAGTCAAACGGAAAGGGTGTTTCCTaGGCCAGGTGGTCAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SCPVGRLAHGTSHSAESNGKGVS*ARWSEG Trigger: ACCTTCTGACCACCTGGCCCAGGAAACACCCTTTCC...GTTTGACTCTGCAGAGTGAGAAGTCCCATGTGCCAGCCGCCCCACGGGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTCTGGTGATCCTGGGGTaGAGGCAGAAGGCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GAGIRPSQQCCARQAEVCLVILG*RQKAAE Trigger: TTCTGCTGCCTTCTGCCTTCACCCCAGGATCACCAG...ACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCTGCCTCCCTTCTCAGCACACAACTGTCTGTGTTTGCTCGACAAAGAATGGTGGGCCAGGCCGGTTaGCAGCCTGCTGGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HSASLLSTQLSVFARQRMVGQAG*QPAGLP Trigger: TGGCAGGCCAGCAGGCTGGCAACCGGCCTGGCCCAC...CATTCTTTGTCGAGCAAACACAGACAGTTGTGTGCTGAGAAGGGAGGCAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR CCA 90 bp | AGATGGCCCCACGAGACGACGTTAGGGACCAGGGACCAGTGGTATCTTGGGAGAGTGGTTGGGGAACCCTaGGAAAGCTGGATGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RWPHETTLGTRDQWYLGRVVGEP*ESWMPR Trigger: TCTGGGCATCCAGCTTTCCCAGGGTTCCCCAACCAC...TCTCCCAAGATACCACTGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGTTCCTGAAGCTCAGCCTCAGGCAGGGCCCATAGCCATTTGCCTCTGCCTCTGGGTTGGGAGGTaGTTGGGGAACCCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PLVPEAQPQAGPIAICLCLWVGR*LGNPGK Trigger: TTTCCCAGGGTTCCCCAACCACCTCCCAACCCAGAG...GCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGCTTCAGGAACAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGTTCCTGAAGCTCAGCCTCAGGCAGGGCCCATAGCCATTTGCCTCTGCGGGACCAGGGACCAGTaGTATCTTGGGAGAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PLVPEAQPQAGPIAICLCGTRDQ*YLGRVG Trigger: GCCAACTCTCCCAAGATACCACTGGTCCCTGGTCCC...GCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGCTTCAGGAACAAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCGAGGCCACTGGTGGCTCCACTGTTTCTCAGCAATGACAGACCTGATGAACGGTTGCCAGCCTGCTaGCCTGCCAAAGTCCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VPRPLVAPLFLSNDRPDERLPAC*PAKVPD Trigger: GTCAGGGACTTTGGCAGGCCAGCAGGCTGGCAACCG...TTCATCAGGTCTGTCATTGCTGAGAAACAGTGGAGCCACCAGTGGCCTCGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCCTGGTGGGTCTGGGTGATGATCTGGTGATCCTGGGGTaGAGGCAGAAGGCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: AVVSTATARVVLVGLGDDLVILG*RQKAAE Trigger: TTCTGCTGCCTTCTGCCTTCACCCCAGGATCACCAG...ATCATCACCCAGACCCACCAGGACTACTCTGGCTGTAGCAGTGGAGACCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCCTGGTGGGTCTGGGTGATGATGGGACCAGGGACCAGTaGTATCTTGGGAGAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: AVVSTATARVVLVGLGDDGTRDQ*YLGRVG Trigger: GCCAACTCTCCCAAGATACCACTGGTCCCTGGTCCC...ATCATCACCCAGACCCACCAGGACTACTCTGGCTGTAGCAGTGGAGACCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGACAGAGCTCTTAGCATCCTCTTGTTCCTGAAGCTCAGCCTCAGGCAGACCTGCTACACCCCCTaGCCAGGGCATGGGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TEDRALSILLFLKLSLRQTCYTP*PGHGQG Trigger: ACCCTGCCCATGCCCTGGCCAGGGGGTGTAGCAGGT...CTGCCTGAGGCTGAGCTTCAGGAACAAGAGGATGCTAAGAGCTCTGTCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCTCAGCCAACAAGAGCAAGGAGACTAAAAGTCTGGTaGTCCTGGGGTGAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KEARADSSSPHAQPTRARRLKVW*SWGEGR Trigger: TCTGCCTTCACCCCAGGATCACCAGACTTTTAGTCT...CCTTGCTCTTGTTGGCTGAGCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGAACCAGTGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCTCATCCTCACCCCATaGTCAGCCAACAAGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: WKEPVWFQEPPASRGPSTLILTP*SANKSK Trigger: CTTGCTCTTGTTGGCTGAGCATGGGGTGAGGATGAG...GGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACACTGGTTCTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGACAGGACTGCTGGGCCATGCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCATAGCCATTTGCCTCTaGCCCAAGGTGAGGGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RTGLLGHAVVSTATARVVIAICL*PKVRVL Trigger: TAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTAT...GACTACTCTGGCTGTAGCAGTGGAGACCACAGCATGGCCCAGCAGTCCTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTCCTGTTCCAGCTGCATaGCAACAGAAGACAGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GAGIRPSQQCCARQAEVCPVPAA*QQKTEL Trigger: GAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGG...ACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGGGCTTATGAGGCAGAAGAGGGTCAGACCCCAGTGTAAGGGCTGTGTGCGTGTCCTAGGACAGGACTaGTGGGCCATGCTGTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: IGLMRQKRVRPQCKGCVRVLGQD*WAMLWS Trigger: AGACCACAGCATGGCCCAGCAGTCCTGTCCTAGGAC...ACGCACACAGCCCTTACACTGGGGTCTGACCCTCTTCTGCCTCATAAGCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTACAGCAGAACCTGAATaGAGCTTGGCCAGACGGACT | + |
|
Preference number: 2 (lower is better) Translates to: GAGIRPSQQCCARQAEVCTAEPE*SLARRT Trigger: AGTCCGTCTGGCCAAGCTCCATTCAGGTTCTGCTGT...ACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTCCAGGCGCTCCCTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTTCTAGTTCATACAGATaGGGATGTGTAGGGGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LIPGAPLGAPVGQAGCQPSSSYR*GCVGVR Trigger: TCTTACCCCTACACATCCCCATCTGTATGAACTAGA...AGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCTGGAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTCCTGGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCACTGTTGTGGGCTCCATaGGGTGAGGTAAATTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VCVSWGRDKTKSAVLCSPLLWAP*GEVNSV Trigger: CACAGAATTTACCTCACCTCATGGAGCCCACAACAG...TGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCCAGGACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAGCCATTTGCCTCTGCCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCAGGGCCTGGGCACCGTaGGTGCTTCTTCCTCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: HSHLPLPQGEGAKGRKILRAWAP*VLLPLY Trigger: ATAGAGAGGAAGAAGCACTCACGGTGCCCAGGCCCT...GAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGACAGGACTGCTGGGCCATGCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCCAGGAAGCCAAGGTTTaGGGATCAGAAGGGAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RTGLLGHAVVSTATARVVQEAKV*GSEGSL Trigger: AAGACTCCCTTCTGATCCTCAAACCTTGGCTTCCTG...GACTACTCTGGCTGTAGCAGTGGAGACCACAGCATGGCCCAGCAGTCCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTCCTGGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCATGCACCTGGCTGGGGTaGTCTGCTTTCATTTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VCVSWGRDKTKSAVLCSPCTWLG*SAFISL Trigger: CAAAGAAATGAAAGCAGATCACCCCAGCCAGGTGCA...TGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCCAGGACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTGAGCAGTGAGAGCTGCTGCTGTTGCTGCTGCTGGCGCTGCTGCCAATGCAGATACTTCATGTACTaGGTCCTGAGGGTGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LVSSESCCCCCCWRCCQCRYFMY*VLRVKA Trigger: TGCCTTCACCCTCAGGACTCAGTACATGAAGTATCT...GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGAGTCAGACAGAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTGCCCTCTCCGAGGGCAGTaGAGGCAATGGGAAGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: WSQTEKADIVKLPAVIWCPLRGQ*RQWEGG Trigger: CCCTCCTTCCCATTGCCTTCACTGCCCTCGGAGAGG...GCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTCTGTCTGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTACCCTGACAGCTCTGTTGTGGGCTCCATaGGGTGAGGTAAATTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PQGEGAKGRKILCPTLTALLWAP*GEVNSV Trigger: CACAGAATTTACCTCACCTCATGGAGCCCACAACAG...AGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGTGGCCTGTTCCAGCTGCATGCCAACAGAAGACAGAGCTCTTAGCATCCCCTGGGCACCGTGAGTaGTTCTTCCTCTCTATACAG | + |
|
Preference number: 2 (lower is better) Translates to: PQWPVPAACQQKTELLASPGHRE*FFLSIQ Trigger: CTGTATAGAGAGGAAGAAGCACTCACGGTGCCCAGG...GGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCATGCATAGCCATTTGCCTCTaGCCCAAGGTGAGGGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PWIRSTLSLPQWPVPAACIAICL*PKVRVL Trigger: TAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTAT...GCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCCTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCATGCACCTGGCTGGGGTaGTCTGCTTTCATTTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: EPWIRSTLSLPQWPVPAACTWLG*SAFISL Trigger: CAAAGAAATGAAAGCAGATCACCCCAGCCAGGTGCA...TGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCGATTTGGCACAGGCACTGGGACTCCATCACCTTTCCTGAGAGTAGATGCGGGGTGCCTCTCTTCTaGATGAAGATGAAGAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QAIWHRHWDSITFPESRCGVPLF*MKMKRS Trigger: TGACCTCTTCATCTTCATGCAGAAGAGAGGCACCCC...GCATCTACTCTCAGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAATCGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGGAGAGTTGGCCAACATAGGCAGGCAGGAAGCCAAGGTTTGAGGATCAGAACAGCAGAACCTGAATaGAGCTTGGCCAGACGGACT | + |
|
Preference number: 2 (lower is better) Translates to: LGRVGQHRQAGSQGLRIRTAEPE*SLARRT Trigger: AGTCCGTCTGGCCAAGCTCCATTCAGGTTCTGCTGT...TCTGATCCTCAAACCTTGGCTTCCTGCCTGCCTATGTTGGCCAACTCTCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTCTTGCAGCACTGTCCCTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTACTCATCCTCACCCCATaGTCAGCCAACAAGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KVLQHCPCHPWVGRVYPLLILTP*SANKSK Trigger: CTTGCTCTTGTTGGCTGAGCATGGGGTGAGGATGAG...TAAAGGATAGACCCTTCCTACCCAGGGGTGACAGGGACAGTGCTGCAAGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTACCCTGACAGCTACACAGACAGACACTTaGTGTGAGAGGAAATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PQGEGAKGRKILCPTLTATQTDT*CERKSE Trigger: CTCAGATTTCCTCTCACAGCAAGTGTCTGTCTGTGT...AGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171444.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAGCCATTTGCCTCTGCCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGGAAAGAACCAGTGTaGTTTCAGGAGCCACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HSHLPLPQGEGAKGRKILWKEPV*FQEPPA Trigger: TGCTGGTGGCTCCTGAAACCACACTGGTTCTTTCCA...GAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTCAGAGTGAGGGGACAGCAGGCCAACCCTAACAGAGTACCCACTATACTGCCACTGGCCCCTAAATaGTTCCTTCTGTCCATCATC | + |
|
Preference number: 2 (lower is better) Translates to: TLRVRGQQANPNRVPTILPLAPK*FLLSII Trigger: GATGATGGACAGAAGGAACCATTTAGGGGCCAGTGG...CAGTATAGTGGGTACTCTGTTAGGGTTGGCCTGCTGTCCCCTCACTCTGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTCTTGCAGCACTGTCCCTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTAAGACTAAAAGTCTGGTaGTCCTGGGGTGAAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KVLQHCPCHPWVGRVYPLRLKVW*SWGEGR Trigger: TCTGCCTTCACCCCAGGATCACCAGACTTTTAGTCT...TAAAGGATAGACCCTTCCTACCCAGGGGTGACAGGGACAGTGCTGCAAGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCAGAGTGAGGGGACAGCAGGCCAACCCTAACAGAGTACCCACTATACTGGTGCAGGGAGAAAAATaGGGAGAATGGGATGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TLRVRGQQANPNRVPTILVQGEK*GEWDVC Trigger: ACACACATCCCATTCTCCTCATTTTTCTCCCTGCAC...CAGTATAGTGGGTACTCTGTTAGGGTTGGCCTGCTGTCCCCTCACTCTGAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAGGGCTTATGAGGCAGAAGAGGGTCAGACCCCAGTGTAAGGGCTGTGTGCGTAGTATTCCAGGGCCCTaGGGAATGAATTTAAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: IGLMRQKRVRPQCKGCVRSIPGP*GMNLRL Trigger: AAGTCTTAAATTCATTCCTCAGGGCCCTGGAATACT...ACGCACACAGCCCTTACACTGGGGTCTGACCCTCTTCTGCCTCATAAGCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGTGGCCTGTTCCAGCTGCATGCCAACAGAAGACAGAGCTCTTAGCATCCAGTATTCCAGGGCCCTaGGGAATGAATTTAAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: PQWPVPAACQQKTELLASSIPGP*GMNLRL Trigger: AAGTCTTAAATTCATTCCTCAGGGCCCTGGAATACT...GGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGTCAGACAGAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTGCATTTGGCACAGGCACTaGGACTCCATCACCTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WSQTEKADIVKLPAVIWCIWHRH*DSITFP Trigger: AGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAAT...GCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTCTGTCTGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCAGAGTGAGGGGACAGCAGGCCAACCCTAACAGAGTACCCACTATACTGATTACATTAAGGTGGTaGGATCTCGGCAAACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: TLRVRGQQANPNRVPTILITLRW*DLGKQT Trigger: TGTCTGTTTGCCGAGATCTCACCACCTTAATGTAAT...CAGTATAGTGGGTACTCTGTTAGGGTTGGCCTGCTGTCCCCTCACTCTGAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATGCCCATCTATGGTCTAATACTGTCTCATCTCTGCCATCTGTCTCTACTAAATGGGAAGGAGGGCTaGAAAGGGTGTTTCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VMPIYGLILSHLCHLSLLNGKEG*KGCFLG Trigger: GCCCAGGAAACACCCTTTCCAGCCCTCCTTCCCATT...TAGTAGAGACAGATGGCAGAGATGAGACAGTATTAGACCATAGATGGGCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | GAGTCACCCCACCTGCTACACCCCCTGGCCAGGGCATaGGCAGGGTGGAGGGAGGTGGCTGCAAACTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ESPHLLHPLARA*AGWREVAANCT Trigger: GGTGCAGTTTGCAGCCACCTCCCTCCACCCTGCCCATGCCCTGGCCAGGGGGTGTAGCAGGTGGGGTGACTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR GCA 72 bp | CTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTaGTGGCCTGCCAAAGTCCCTGACACAGCCAGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LRCSSGPGRLPA*WPAKVPDTARR Trigger: TCGCCTGGCTGTGTCAGGGACTTTGGCAGGCCAGCAGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | AGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTGCTaGCCTGCCAAAGTCCCTGACACAGCCAGGCGATTT | + |
|
Preference number: 3 (lower is better) Translates to: RCSSGPGRLPAC*PAKVPDTARRF Trigger: AAATCGCCTGGCTGTGTCAGGGACTTTGGCAGGCCAGCAGGCTGGCAACCGGCCTGGCCCACTGGAGCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | AGTCAGGCAGGGCCAACTGGGAAGCTGCACTTTGGCTaGCAGTCAGCGTGGGCCTTCCAGAGCTCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQAGPTGKLHFG*QSAWAFQSSRG Trigger: GCCTCTGGAGCTCTGGAAGGCCCACGCTGACTGGCAGCCAAAGTGCAGCTTCCCAGTTGGCCCTGCCTGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | GGCCTTCAGGACTATACCTGCGGGGGAAGCGCCACTTaGGCCAAAGCCCTAGTGCTGGGCACACAAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GLQDYTCGGSAT*AKALVLGTQGT Trigger: GGTGCCTTGTGTGCCCAGCACTAGGGCTTTGGCCCAAGTGGCGCTTCCCCCGCAGGTATAGTCCTGAAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | ACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATaGCCACGTGGCCTTCAGGACTATACCTGCGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TQKGRRLSWPTT*PRGLQDYTCGG Trigger: TCCCCCGCAGGTATAGTCCTGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | ACCACAAGGTGTCTGAGGGAGTCAGGCAGGGCCAACTaGGAAGCTGCACTTTGGCTGCCAGTCAGCGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TTRCLRESGRAN*EAALWLPVSVG Trigger: GCCCACGCTGACTGGCAGCCAAAGTGCAGCTTCCCAGTTGGCCCTGCCTGACTCCCTCAGACACCTTGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | TGTGAGGATCTCAGGAGAAGGCTCTTTTGCCCTTCCTaGCCCGTGGGGCGGCTGGCACATGGGACTTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CEDLRRRLFCPS*PVGRLAHGTSH Trigger: GTGAGAAGTCCCATGTGCCAGCCGCCCCACGGGGCAGGAAGGGCAAAAGAGCCTTCTCCTGAGATCCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | CTGACATCACCATGTCTTGGGCTGGTAGGGCTGAGATaGCCCCACGAGACGACGTTAGGGACCAGGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTSPCLGLVGLR*PHETTLGTRDQ Trigger: CTGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCTCAGCCCTACCAGCCCAAGACATGGTGATGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | CTCTCCGAGGGCAGTGAAGGCAATGGGAAGGAGGGCTaGAAAGGGTGTTTCCTGGGCCAGGTGGTCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSEGSEGNGKEG*KGCFLGQVVRR Trigger: CCTTCTGACCACCTGGCCCAGGAAACACCCTTTCCAGCCCTCCTTCCCATTGCCTTCACTGCCCTCGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGCAGCAGAGCCAGGCTAACCAACTTCCGTCATTCCCTGACTCTCAGAGTGCAGGAGAAGGCTCTTTaGCCCTTCCTGCCCCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGSRARLTNFRHSLTLRVQEKAL*PFLPRG Trigger: CCCACGGGGCAGGAAGGGCAAAAGAGCCTTCTCCTG...CACTCTGAGAGTCAGGGAATGACGGAAGTTGGTTAGCCTGGCTCTGCTGCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | GCTCAGCCTCAGGCAGGGCCCATAGCCATTTGCCTCTaGCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: AQPQAGPIAICL*PKVRVLKAERS Trigger: GGATCTTTCTGCCTTTAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTATGGGCCCTGCCTGAGGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | TGGCCCCACGAGACGACGTTAGGGACCAGGGACCAGTaGTATCTTGGGAGAGTTGGCCAACATAGGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WPHETTLGTRDQ*YLGRVGQHRQA Trigger: TGCCTGCCTATGTTGGCCAACTCTCCCAAGATACCACTGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | TGCTGGGCACACAAGGCACCCAGCTCTTGCATTTTCTaGCTAGGAGCCTGCTGCTGGCTTGAGGGCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CWAHKAPSSCIF*LGACCWLEGSE Trigger: CTCACTGCCCTCAAGCCAGCAGCAGGCTCCTAGCCAGAAAATGCAAGAGCTGGGTGCCTTGTGTGCCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTGGAGGGAGGTGGCTGCAAACTGCACCTGGCTGGGGTGATCTGCTTTCATATATACTACTCTGGGTaGGGAGGTGGTTGGGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RVEGGGCKLHLAGVICFHIYYSG*GGGWGT Trigger: GGTTCCCCAACCACCTCCCAACCCAGAGTAGTATAT...ATGAAAGCAGATCACCCCAGCCAGGTGCAGTTTGCAGCCACCTCCCTCCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR TCA 72 bp | TGTCCATCATCCGAGAGGGCTGTCTACTTGGGGATCTaGGGGCTCCTTTCACTCTGCCTCCCTTCTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CPSSERAVYLGI*GLLSLCLPSQH Trigger: GTGCTGAGAAGGGAGGCAGAGTGAAAGGAGCCCTCAGATCCCCAAGTAGACAGCCCTCTCGGATGATGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | GTGTGTCCTGGGGCAGGGATAAGACCAAGTCAGCAGTaGTGTGCTCGCCAGGCTGAGGTATGTTTGTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: VCPGAGIRPSQQ*CARQAEVCLCI Trigger: TATGCACAAACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCCAGGACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | GTTCCTTCTGTCCATCATCCGAGAGGGCTGTCTACTTaGGGATCTGAGGGCTCCTTTCACTCTGCCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPSVHHPRGLST*GSEGSFHSASL Trigger: AAGGGAGGCAGAGTGAAAGGAGCCCTCAGATCCCCAAGTAGACAGCCCTCTCGGATGATGGACAGAAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | GAGCCCTGGATAAGGTCTACCCTTTCTCTACCACAGTaGCCTGTTCCAGCTGCATGCCAACAGAAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EPWIRSTLSLPQ*PVPAACQQKTE Trigger: CTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | AATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTaGCCAACCACATGGCCACGTGGCCTTCAGGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: NTYKTQKGRRLS*PTTWPRGLQDY Trigger: ATAGTCCTGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | CAGAAGGTACCTACTGCCACTAAGCCTGAGCAGAGCTaGGGTATGACAGGCGTTATGAGGGGAGATGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QKVPTATKPEQS*GMTGVMRGDGV Trigger: AACTCCATCTCCCCTCATAACGCCTGTCATACCCCAGCTCTGCTCAGGCTTAGTGGCAGTAGGTACCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR TCA 72 bp | CAGGCCAACCCTAACAGAGTACCCACTATACTGAAGTaGTCTGAAAACCTGCCCTGGCCACAAACTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QANPNRVPTILK*SENLPWPQTAL Trigger: CAGGGCAGTTTGTGGCCAGGGCAGGTTTTCAGATCACTTCAGTATAGTGGGTACTCTGTTAGGGTTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | GTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTaGATGCCAACAGAAGACAGAGCTCTTAGCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VYPFSTTVACSS*MPTEDRALSIL Trigger: GAGGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CCA 72 bp | AACAGAGTGAGGCACACTGCGATGAGAATGGAGCCCTaGATAAGGTCTACCCTTTCTCTACCACAGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NRVRHTAMRMEP*IRSTLSLPQWP Trigger: AGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGGCTCCATTCTCATCGCAGTGTGCCTCACTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACTTCTCACTCTGCAGAGTCAAACACTCTTCCATGTGAGTTACCTTTTCCAACACAGCCAGGCGATTaGGCACAGGCACTGGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: GTSHSAESNTLPCELPFPTQPGD*AQALGL Trigger: GAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTGT...TGGAAAAGGTAACTCACATGGAAGAGTGTTTGACTCTGCAGAGTGAGAAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGAGCAGTGAGAGCTGCTGCTGTTGCTGCTGCTGGCGCTGCTGCCAATGCATATCCACAGACATATaGATGCTCCCAATGTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVSSESCCCCCCWRCCQCISTDI*MLPMLL Trigger: AAGCAACATTGGGAGCATCAATATGTCTGTGGATAT...GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGAACCAGTGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCTCTGCTTTCATTTCTTaGGTGCTACAACAGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: WKEPVWFQEPPASRGPSTSAFIS*VLQQQQ Trigger: TTGTTGCTGTTGTAGCACCAAAGAAATGAAAGCAGA...GGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACACTGGTTCTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR TCA 72 bp | GCTACTCTGTCCTGCCCCCTAGAATACAGCAGAACCTaGATGGAGCTTGGCCAGACGGACTCTTCCAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: ATLSCPLEYSRT*MELGQTDSSKF Trigger: AAATTTGGAAGAGTCCGTCTGGCCAAGCTCCATTCAGGTTCTGCTGTATTCTAGGGGGCAGGACAGAGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| 3UTR TCA 72 bp | GGGAACAAGCTGCCTGAGGAAAGAGTATTTGATGACTaGAAAGTCTTGCAGCACTGTCCCTGTCACCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GNKLPEERVFDD*KVLQHCPCHPW Trigger: CCAGGGGTGACAGGGACAGTGCTGCAAGACTTTTCAGTCATCAAATACTCTTTCCTCAGGCAGCTTGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR TCA 72 bp | GACAGCAGGCCAACCCTAACAGAGTACCCACTATACTaGAGTGATCTGAAAACCTGCCCTGGCCACAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: DSRPTLTEYPLY*SDLKTCPGHKL Trigger: CAGTTTGTGGCCAGGGCAGGTTTTCAGATCACTTCAGTATAGTGGGTACTCTGTTAGGGTTGGCCTGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | ACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCATaGCAACAGAAGACAGAGCTCTTAGCATCCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLSLPQWPVPAA*QQKTELLASSC Trigger: ACAAGAGGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR GCA 72 bp | CAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTTTGTaGATAAGCTTTTCCCTTTCTTGTCCTAGGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QQCCARQAEVCL*ISFSLSCPRTG Trigger: TCCTGTCCTAGGACAAGAAAGGGAAAAGCTTATGCACAAACATACCTCAGCCTGGCGAGCACAGCACTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR GCA 72 bp | CTCTGCCTCCCTTCTCAGCACACAACTGTCTGTGTTTaGTCGACAAAGAATGATAGCAACCACGGCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCLPSQHTTVCV*STKNDSNHGTD Trigger: GTCTGTGCCGTGGTTGCTATCATTCTTTGTCGAGCAAACACAGACAGTTGTGTGCTGAGAAGGGAGGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR TCA 72 bp | GATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAGGCTaGGGTATGTTTGTGCATAAGCTTTTCCCTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DKTKSAVLCSPG*GMFVHKLFPFL Trigger: CAAGAAAGGGAAAAGCTTATGCACAAACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR GCA 72 bp | GCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTGCTaGTTAGTCATGCCCATCTATGGTCTAATACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ADIVKLPAVIWC*LVMPIYGLILS Trigger: AGACAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTGACTATGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | AGTCAAACACTCTTCCATGTGAGTTACCTTTTCCACTaGCCCCTAAATGGTTCCTTCTGTCCATCATCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SQTLFHVSYLFH*PLNGSFCPSSE Trigger: CTCGGATGATGGACAGAAGGAACCATTTAGGGGCCAGTGGAAAAGGTAACTCACATGGAAGAGTGTTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | TGCTGTCATCTGGTGCTGCTTAGTCATGCCCATCTATaGTCTAATACTGTCTCATCTCTGCCATCTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CCHLVLLSHAHL*SNTVSSLPSVS Trigger: AGAGACAGATGGCAGAGATGAGACAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTCAGACAGAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTGCATATCCACAGACATATaGATGCTCCCAATGTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: WSQTEKADIVKLPAVIWCISTDI*MLPMLL Trigger: AAGCAACATTGGGAGCATCAATATGTCTGTGGATAT...GCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTCTGTCTGACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR GCA 72 bp | AAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTGGTaGTGCTTAGTCATGCCCATCTATGGTCTAATACTG | + |
|
Preference number: 3 (lower is better) Translates to: KADIVKLPAVIW*CLVMPIYGLIL Trigger: CAGTATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR CCA 72 bp | GAGAAAGCAGACATAGTCAAGCTTCCTGCTGTCATCTaGTGCTGCTTAGTCATGCCCATCTATGGTCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: EKADIVKLPAVI*CCLVMPIYGLI Trigger: TATTAGACCATAGATGGGCATGACTAAGCAGCACCAGATGACAGCAGGAAGCTTGACTATGTCTGCTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| 3UTR TCA 72 bp | AGGAACAACAACAACAACAAAAGTATTCCAGGGCCCTaGGGAATGAATTTAAGACTTGGATATGGGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: RNNNNNKSIPGP*GMNLRLGYGRS Trigger: GGATCTCCCATATCCAAGTCTTAAATTCATTCCTCAGGGCCCTGGAATACTTTTGTTGTTGTTGTTGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCAGGCGCTCCCTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTTCGGCTGTCCAGCTGTaGGCACAGAGGGCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPGAPLGAPVGQAGCQPSAVQL*AQRAGP Trigger: AGGCCCCGCCCTCTGTGCCCACAGCTGGACAGCCGA...AGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCTGGAATCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR TCA 90 bp | GACGAGAGAAGGGCGGGGGTCCCAGCAGAGGCAGCACTAGCAGCAGCGGCGGCGAAGGTCTCCCGGGTGTaGTGGAAAGGAGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DERRAGVPAEAALAAAAAKVSRV*WKGEQA Trigger: AGCCTGCTCTCCTTTCCATCACACCCGGGAGACCTT...CGCCGCCGCTGCTGCTAGTGCTGCCTCTGCTGGGACCCCCGCCCTTCTCTCGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCTTCAGGAGGCGCTCCCTTAGGTaGTCCAGTGGGCCAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRGGGCPGQPHGHVAFRRRSLR*SSGPGR Trigger: CCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCT...CCTGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGTAGGGCTGAGATGGCCCCACGAGACGACGTTAGGGACCAGGGACCATCGGCTGTCCAGCTGTaGGCACAGAGGGCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGRAEMAPRDDVRDQGPSAVQL*AQRAGP Trigger: AGGCCCCGCCCTCTGTGCCCACAGCTGGACAGCCGA...TGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCTCAGCCCTACCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CCTACCCTGACAGCTGGGGTAGGGGCGGTGGAAAGAACCAGTGTGGTTTCAGGAGTGGGCCAGGCCGGTTaGCAGCCTGCTGGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTAGVGAVERTSVVSGVGQAG*QPAGLP Trigger: TGGCAGGCCAGCAGGCTGGCAACCGGCCTGGCCCAC...TCCTGAAACCACACTGGTTCTTTCCACCGCCCCTACCCCAGCTGTCAGGGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GATCCACTCCTGGAGACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCAGGCGCTCCCTTAGGTaGTCCAGTGGGCCAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DPLLETKGGPGRLILTPCRRSLR*SSGPGR Trigger: CCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCT...GCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGTCTCCAGGAGTGGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCTCGGCTGTCCAGCTGTaGGCACAGAGGGCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGSAVQL*AQRAGP Trigger: AGGCCCCGCCCTCTGTGCCCACAGCTGGACAGCCGA...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGTAGGGCTGAGATGGCCCCACGAGACGACGTTAGGGACCAGGGACCAAGCAGTGAGAGCTGCTaGTGTTGCTGCTGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WAGRAEMAPRDDVRDQGPSSESC*CCCCWR Trigger: GCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCT...TGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCTCAGCCCTACCAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCTTCAGGCACAGCCAGGCGATTTaGCACAGGCACTGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRRGGGCPGQPHGHVAFRHSQAI*HRHWDS Trigger: GGAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTG...CCTGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGTTGGCCAACATAGGCAGGCAGGAAGCCAAGGTTTGAGGATCAGAAGGGTGGGCCAGGCCGGTTaGCAGCCTGCTGGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVGQHRQAGSQGLRIRRVGQAG*QPAGLP Trigger: TGGCAGGCCAGCAGGCTGGCAACCGGCCTGGCCCAC...CCTTCTGATCCTCAAACCTTGGCTTCCTGCCTGCCTATGTTGGCCAACTCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCCATCCTCCTGCTTGCTGCTGTTGCTGCTaGTGGCGCTGCTGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: CGFRSHQQAGVPPPHPPACCCCC*WRCCQC Trigger: GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCA...AGCAGGAGGATGGGGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCGAGAGCTGCTGCTGTTaGTGCTGCTGGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGESCCC*CCWRCC Trigger: GCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTC...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCAGGCGCTCCCTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTTGGCTGGTGGAACTCTaGCTAAGGGACCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPGAPLGAPVGQAGCQPWLVEL*LRDPEQ Trigger: CTGTTCTGGGTCCCTTAGCCAGAGTTCCACCAGCCA...AGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCTGGAATCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | GATCCACTCCTGGAGACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCCGGTTGCCAGCCTGCTaGCCTGCCAAAGTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPLLETKGGPGRLILTPCRLPAC*PAKVPD Trigger: GTCAGGGACTTTGGCAGGCCAGCAGGCTGGCAACCG...GCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGTCTCCAGGAGTGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CAA 72 bp | TGGCCTTCAGGACTATACCTGCGGGGGAAGCGCCACTaGGGCCAAAGCCCTAGTGCTGGGCACACAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSGLYLRGKRH*GQSPSAGHTRH Trigger: GTGCCTTGTGTGCCCAGCACTAGGGCTTTGGCCCAAGTGGCGCTTCCCCCGCAGGTATAGTCCTGAAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCCATCCTCCTGCTGTGATGAAGGTCTCCCGGGTGTaGTGGAAAGGAGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRSHQQAGVPPPHPPAVMKVSRV*WKGEQA Trigger: AGCCTGCTCTCCTTTCCATCACACCCGGGAGACCTT...CATCACAGCAGGAGGATGGGGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCAAGGTCTCCCGGGTGTaGTGGAAAGGAGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRRGGGCPGQPHGHVAKVSRV*WKGEQA Trigger: AGCCTGCTCTCCTTTCCATCACACCCGGGAGACCTT...GGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCCATCCTCCTGCTGTGAGCAGTGAGAGCTaGTGCTGTTGCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGFRSHQQAGVPPPHPPAVSSES*CCCCCW Trigger: CCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCAC...AGCAGGAGGATGGGGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GACGAGAGAAGGGCGGGGGTCCCAGCAGAGGCAGCACTAGCAGCAGCGGCGGCGTGCCAGACTCCCTTTTaGATTATTGTGGATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DERRAGVPAEAALAAAAACQTPF*IIVDSW Trigger: CCAGCTATCCACAATAATGCAAAAGGGAGTCTGGCA...CGCCGCCGCTGCTGCTAGTGCTGCCTCTGCTGGGACCCCCGCCCTTCTCTCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCGGATCTTGGGGGACGAGAGAAGGGCGGGGGTCCCAGCAGAGGCAGCAGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKRILGDERRAGVPAEAAEAGWT*VLLWVL Trigger: AAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTC...TGCTGCCTCTGCTGGGACCCCCGCCCTTCTCTCGTCCCCCAAGATCCGCTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCTTCAGGGTACTGGAAGCAGGCTaGACATGGGTGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRGGGCPGQPHGHVAFRVLEAG*TWVLLW Trigger: CCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTAC...CCTGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGAGGGAGGTGGCTGCAAACTGCACCTGGCTGGGGTGATCTGCTTTCATCGGTTGCCAGCCTGCTaGCCTGCCAAAGTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVEGGGCKLHLAGVICFHRLPAC*PAKVPD Trigger: GTCAGGGACTTTGGCAGGCCAGCAGGCTGGCAACCG...ATGAAAGCAGATCACCCCAGCCAGGTGCAGTTTGCAGCCACCTCCCTCCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CCTACCCTGACAGCTGGGGTAGGGGCGGTGGAAAGAACCAGTGTGGTTTCAGGATGCTGCTGTTGCTGCTaGTGGCGCTGCTGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLTAGVGAVERTSVVSGCCCCC*WRCCQC Trigger: GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCA...TCCTGAAACCACACTGGTTCTTTCCACCGCCCCTACCCCAGCTGTCAGGGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCTCAGCCAACAAGAGCAAGGGTGAGCAGTGAGAGCTaGTGCTGTTGCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEARADSSSPHAQPTRARVSSES*CCCCCW Trigger: CCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCAC...CCTTGCTCTTGTTGGCTGAGCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCCCGTGGGGCGGCTGGCACATGGGACTTCTCACTCTGCAGAGTCAAACTGGCTGGTGGAACTCTaGCTAAGGGACCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SCPVGRLAHGTSHSAESNWLVEL*LRDPEQ Trigger: CTGTTCTGGGTCCCTTAGCCAGAGTTCCACCAGCCA...GTTTGACTCTGCAGAGTGAGAAGTCCCATGTGCCAGCCGCCCCACGGGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCTCAGCCAACAAGAGCAAGGCTGCTGCCAATGCTCTaGGGAGTAGAGCCCGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KEARADSSSPHAQPTRARLLPML*GVEPAM Trigger: CATTGCGGGCTCTACTCCCCAGAGCATTGGCAGCAG...CCTTGCTCTTGTTGGCTGAGCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGACTGCTGGGCCATGCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCGGACTTGGTGAGCAGTaGGAGCTGCTGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGLLGHAVVSTATARVVGLGEQ*ELLLLL Trigger: CAGCAACAGCAGCAGCTCTCACTGCTCACCAAGTCC...GACTACTCTGGCTGTAGCAGTGGAGACCACAGCATGGCCCAGCAGTCCTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCATCTGTAGCAGAGGCTaGTGTGGCTGCTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGICSRG*CGCFCC Trigger: GCAGCAGAAGCAGCCACAGCAGCCTCTGCTACAGAT...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GATCCACTCCTGGAGACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCGACCTTCCCTACGGTTaGCATCGATGGCTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DPLLETKGGPGRLILTPCDLPYG*HRWLPV Trigger: TACAGGCAGCCATCGATGGCAACCGTAGGGAAGGTC...GCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGTCTCCAGGAGTGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTACCCTGACAGCTAGCAGTGAGAGCTGCTaGTGTTGCTGCTGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PQGEGAKGRKILCPTLTASSESC*CCCCWR Trigger: GCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCT...AGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCTGGCTGGTGGAACTCTaGCTAAGGGACCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGWLVEL*LRDPEQ Trigger: CTGTTCTGGGTCCCTTAGCCAGAGTTCCACCAGCCA...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCAGGCGCTCCCTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTACATGGGTGTTGCTCTaGGTTCTTGGCGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPGAPLGAPVGQAGCQPTWVLL*VLGELL Trigger: AAGTAACTCGCCAAGAACCCAGAGCAACACCCATGT...AGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCTGGAATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTGAGCAGTGAGAGCTGCTGCTGTTGCTGCTGCTGGCGCTGCTGCCAATGCGTACTGGAAGCAGGCTaGACATGGGTGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSSESCCCCCCWRCCQCVLEAG*TWVLLW Trigger: CCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTAC...GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCACTGGTGGCTCCACTGTTTCTCAGCAATGACAGACCTGATGAAAGATTCGGCTGTCCAGCTGTaGGCACAGAGGGCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGHWWLHCFSAMTDLMKDSAVQL*AQRAGP Trigger: AGGCCCCGCCCTCTGTGCCCACAGCTGGACAGCCGA...ATCTTTCATCAGGTCTGTCATTGCTGAGAAACAGTGGAGCCACCAGTGGCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCCATCCTCCTGCTGGGGTGCCTCTCTTCTaGATGAAGATGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGFRSHQQAGVPPPHPPAGVPLF*MKMKRS Trigger: TGACCTCTTCATCTTCATGCAGAAGAGAGGCACCCC...AGCAGGAGGATGGGGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCAGTGGGCCAGGCCGGTTaGCAGCCTGCTGGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLCTYGPGSPYASNAKSVGQAG*QPAGLP Trigger: TGGCAGGCCAGCAGGCTGGCAACCGGCCTGGCCCAC...TGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | GATCCACTCCTGGAGACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPLLETKGGPGRLILTPCEAGWT*VLLWVL Trigger: AAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTC...GCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGTCTCCAGGAGTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCTCGGCTGTCCAGCTGTaGGCACAGAGGGCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTDSSKFNIWPDGVCCGLSAVQL*AQRAGP Trigger: AGGCCCCGCCCTCTGTGCCCACAGCTGGACAGCCGA...GAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTACCCTGACAGCTATCTGTAGCAGAGGCTaGTGTGGCTGCTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQGEGAKGRKILCPTLTAICSRG*CGCFCC Trigger: GCAGCAGAAGCAGCCACAGCAGCCTCTGCTACAGAT...AGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GACGAGAGAAGGGCGGGGGTCCCAGCAGAGGCAGCACTAGCAGCAGCGGCGGCGTGGCGAGTTACTTTTTaGATGTGGAAATATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DERRAGVPAEAALAAAAAWRVTF*MWKYLE Trigger: TTCCAAATATTTCCACATGCAAAAAGTAACTCGCCA...CGCCGCCGCTGCTGCTAGTGCTGCCTCTGCTGGGACCCCCGCCCTTCTCTCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCCATTCTGCTTAAGCTaGTCATCCAGACTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGPFCLS*SSRLQL Trigger: GAGCTGGAGTCTGGATGAGCAGCTTAAGCAGAATGG...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTACCCTGACAGCTTTTCCTGAGAGTAGATaGCGGGGGTATCCGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGEGAKGRKILCPTLTAFPESR*RGYPRA Trigger: AGCCCTCGGATACCCCCGGCATCTACTCTCAGGAAA...AGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAAGGCGCTCCCTTAGGTaGTCCAGTGGGCCAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVILSVCVPMVQGLLTLRRSLR*SSGPGR Trigger: CCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCT...TAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCTGCCCTACCCTGACAGCTGTACTGGAAGCAGGCTaGACATGGGTGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGEGAKGRKILCPTLTAVLEAG*TWVLLW Trigger: CCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTAC...AGCTGTCAGGGTAGGGCAGAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | AATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACACAGCCAGGCGATTTaGCACAGGCACTGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTYKTQKGRRLSWPTTWPHSQAI*HRHWDS Trigger: GGAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTG...TGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGTGGCCTGTTCCAGCTGCATGCCAACAGAAGACAGAGCTCTTAGCATCCCTGCTGCCAATGCTCTaGGGAGTAGAGCCCGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PQWPVPAACQQKTELLASLLPML*GVEPAM Trigger: CATTGCGGGCTCTACTCCCCAGAGCATTGGCAGCAG...GGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CAA 72 bp | GGCAGGAAGCCAAGGTTTGAGGATCAGAAGGGAGTCTaGTTGGGTAGGTATCAGGGCCTGGGCACCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKPRFEDQKGV*LGRYQGLGTVS Trigger: ACTCACGGTGCCCAGGCCCTGATACCTACCCAACAAGACTCCCTTCTGATCCTCAAACCTTGGCTTCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCGATTTGGCACAGGCACTGGGACTCCATCACCTTTCCTGAGAGTAGATGCATCTGTAGCAGAGGCTaGTGTGGCTGCTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAIWHRHWDSITFPESRCICSRG*CGCFCC Trigger: GCAGCAGAAGCAGCCACAGCAGCCTCTGCTACAGAT...GCATCTACTCTCAGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAATCGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCCTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCAGACCTTCCCTACGGTTaGCATCGATGGCTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EPWIRSTLSLPQWPVPAADLPYG*HRWLPV Trigger: TACAGGCAGCCATCGATGGCAACCGTAGGGAAGGTC...TGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGGCTTATGAGGCAGAAGAGGGTCAGACCCCAGTGTAAGGGCTGTGTGCGTTTTCCTGAGAGTAGATaGCGGGGGTATCCGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGLMRQKRVRPQCKGCVRFPESR*RGYPRA Trigger: AGCCCTCGGATACCCCCGGCATCTACTCTCAGGAAA...ACGCACACAGCCCTTACACTGGGGTCTGACCCTCTTCTGCCTCATAAGCCCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCATGCGTACTGGAAGCAGGCTaGACATGGGTGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWIRSTLSLPQWPVPAACVLEAG*TWVLLW Trigger: CCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTAC...GCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGTCAGGGAAAGGATTCTTGCTCTCTGAGACTGGTCATACTATCAGTCTGTCGGCTGTCCAGCTGTaGGCACAGAGGGCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGKGFLLSETGHTISLSAVQL*AQRAGP Trigger: AGGCCCCGCCCTCTGTGCCCACAGCTGGACAGCCGA...CAGACTGATAGTATGACCAGTCTCAGAGAGCAAGAATCCTTTCCCTGACAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTCCTGGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAATTTGGCACAGGCACTaGGACTCCATCACCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVSWGRDKTKSAVLCSPIWHRH*DSITFP Trigger: AGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAAT...TGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCCAGGACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | AGATGGCCCCACGAGACGACGTTAGGGACCAGGGACCAGTGGTATCTTGGGAGAATTTGGCACAGGCACTaGGACTCCATCACCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWPHETTLGTRDQWYLGRIWHRH*DSITFP Trigger: AGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAAT...TCTCCCAAGATACCACTGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCCCATCCTCCTGCTGCACACCTGTATAGGTaGTACCATCAATATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CGFRSHQQAGVPPPHPPAAHLYR*YHQYPQ Trigger: CTGTGGATATTGATGGTACCACCTATACAGGTGTGC...AGCAGGAGGATGGGGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTTGCAGCACTGTCCCTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTAAAGGTCTCCCGGGTGTaGTGGAAAGGAGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVLQHCPCHPWVGRVYPLKVSRV*WKGEQA Trigger: AGCCTGCTCTCCTTTCCATCACACCCGGGAGACCTT...TAAAGGATAGACCCTTCCTACCCAGGGGTGACAGGGACAGTGCTGCAAGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTTGCAGCACTGTCCCTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTAGGACTTGGTGAGCAGTaGGAGCTGCTGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLQHCPCHPWVGRVYPLGLGEQ*ELLLLL Trigger: CAGCAACAGCAGCAGCTCTCACTGCTCACCAAGTCC...TAAAGGATAGACCCTTCCTACCCAGGGGTGACAGGGACAGTGCTGCAAGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGAACCAGTGTGGTTTCAGGAGCCACCAGCAAGCAGGGGTCCCTCCACCGCCAAAGCACCATTCTaGTTAAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKEPVWFQEPPASRGPSTAKAPF*LSCSSR Trigger: TCTGGATGAGCAGCTTAAGCAGAATGGTGCTTTGGC...GGTGGAGGGACCCCTGCTTGCTGGTGGCTCCTGAAACCACACTGGTTCTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTCTCCACTGCTACAGCCAGAGTAGTCCTGGTGGGTCTGGGTGATGATGGGGTGCCTCTCTTCTaGATGAAGATGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVVSTATARVVLVGLGDDGVPLF*MKMKRS Trigger: TGACCTCTTCATCTTCATGCAGAAGAGAGGCACCCC...ATCATCACCCAGACCCACCAGGACTACTCTGGCTGTAGCAGTGGAGACCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGCCAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGAGAGCTGCTGCTGTTaGTGCTGCTGGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLARRTLPNLTSGQMVSVESCCC*CCWRCC Trigger: GCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTC...AACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTGGCCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCCATGAGGTGGAGAGCTGCTGCTGTTaGTGCTGCTGGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKFNIWPDGVCCGLHEVESCCC*CCWRCC Trigger: GCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTC...CACCTCATGGAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCAGGCGCTCCCTTAGGTGCTCCAGTGGGCCAGGCCGGTTGCCAGCCTGTTACTTTTTGCATGTaGAAATATTTGGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPGAPLGAPVGQAGCQPVTFCM*KYLEAA Trigger: GGCTGCTTCCAAATATTTCCACATGCAAAAAGTAAC...AGGCTGGCAACCGGCCTGGCCCACTGGAGCACCTAAGGGAGCGCCTGGAATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | CCTACCCTGACAGCTGGGGTAGGGGCGGTGGAAAGAACCAGTGTGGTTTCAGGAACATGGGTGTTGCTCTaGGTTCTTGGCGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PTLTAGVGAVERTSVVSGTWVLL*VLGELL Trigger: AAGTAACTCGCCAAGAACCCAGAGCAACACCCATGT...TCCTGAAACCACACTGGTTCTTTCCACCGCCCCTACCCCAGCTGTCAGGGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCTCAGCCAACAAGAGCACATGGGTGTTGCTCTaGGTTCTTGGCGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TKGGPGRLILTPCSANKSTWVLL*VLGELL Trigger: AAGTAACTCGCCAAGAACCCAGAGCAACACCCATGT...GCTCTTGTTGGCTGAGCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGTTGGCCAACATAGGCAGGCAGGAAGCCAAGGTTTGAGGATCAGAAGGGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRVGQHRQAGSQGLRIRREAGWT*VLLWVL Trigger: AAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTC...CCTTCTGATCCTCAAACCTTGGCTTCCTGCCTGCCTATGTTGGCCAACTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCAGTGTAAAAAGACACACCCCCATCATCCCACCACAAGGTGTCTGAGGCACAGCCAGGCGATTTaGCACAGGCACTGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQCKKTHPHHPTTRCLRHSQAI*HRHWDS Trigger: GGAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTG...CCTCAGACACCTTGTGGTGGGATGATGGGGGTGTGTCTTTTTACACTGACTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | GGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATCGGTTGCCAGCCTGCTaGCCTGCCAAAGTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHTISLCTYGPGSPYASNRLPAC*PAKVPD Trigger: GTCAGGGACTTTGGCAGGCCAGCAGGCTGGCAACCG...ATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | GATCCACTCCTGGAGACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCGCACACCTGTATAGGTaGTACCATCAATATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DPLLETKGGPGRLILTPCAHLYR*YHQYPQ Trigger: CTGTGGATATTGATGGTACCACCTATACAGGTGTGC...GCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGTCTCCAGGAGTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | GGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGGCTGCCAGTCAGCGTaGGCCTTCCAGAGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHTISLCTYGPGSPYASNGCQSA*AFQSSR Trigger: TCTGGAGCTCTGGAAGGCCCACGCTGACTGGCAGCC...ATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR TCA 90 bp | CAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCGGACTTGGTGAGCAGTaGGAGCTGCTGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTDSSKFNIWPDGVCCGLGLGEQ*ELLLLL Trigger: CAGCAACAGCAGCAGCTCTCACTGCTCACCAAGTCC...GAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR GCA 90 bp | ATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACCCATTCTGCTTAAGCTaGTCATCCAGACTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHTRHRRGGGCPGQPHGHPFCLS*SSRLQL Trigger: GAGCTGGAGTCTGGATGAGCAGCTTAAGCAGAATGG...GTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCGATTTGGCACAGGCACTGGGACTCCATCACCTTTCCTGAGAGTAGATGCCCATTCTGCTTAAGCTaGTCATCCAGACTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAIWHRHWDSITFPESRCPFCLS*SSRLQL Trigger: GAGCTGGAGTCTGGATGAGCAGCTTAAGCAGAATGG...GCATCTACTCTCAGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAATCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | CGATTTGGCACAGGCACTGGGACTCCATCACCTTTCCTGAGAGTAGATGCCGGGGCCAAAGCACCATTCTaGTTAAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFGTGTGTPSPFLRVDAGAKAPF*LSCSSR Trigger: TCTGGATGAGCAGCTTAAGCAGAATGGTGCTTTGGC...CCCGGCATCTACTCTCAGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGCCAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTTGCTGCTGTTGCTGCTaGTGGCGCTGCTGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLARRTLPNLTSGQMVSVCCCCC*WRCCQC Trigger: GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCA...AACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTGGCCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCCATGAGGTGAGCAGTGAGAGCTGCTaGTGTTGCTGCTGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKFNIWPDGVCCGLHEVSSESC*CCCCWR Trigger: GCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCT...CACCTCATGGAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR GCA 90 bp | CAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCGTGAGCAGTGAGAGCTaGTGCTGTTGCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTDSSKFNIWPDGVCCGLVSSES*CCCCCW Trigger: CCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCAC...GAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCAGGGCCAACTGGGAAGCTaGACTTTGGCTGCCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVCVPMVQGLLTLAMLSQGQLGS*TLAASQ Trigger: CTGACTGGCAGCCAAAGTGCAGCTTCCCAGTTGGCC...CTGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCACTGGTGGCTCCACTGTTTCTCAGCAATGACAGACCTGATGAAAGATGTACTGGAAGCAGGCTaGACATGGGTGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGHWWLHCFSAMTDLMKDVLEAG*TWVLLW Trigger: CCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTAC...ATCTTTCATCAGGTCTGTCATTGCTGAGAAACAGTGGAGCCACCAGTGGCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCCTGCTGCCAATGCTCTaGGGAGTAGAGCCCGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QTDSSKFNIWPDGVCCGLLLPML*GVEPAM Trigger: CATTGCGGGCTCTACTCCCCAGAGCATTGGCAGCAG...GAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 ENSMUST00000171949.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCATGGGAAGCTGCACTTTaGCTGCCAGTCAGCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLCTYGPGSPYASNAKSWEAAL*LPVSVG Trigger: GCCCACGCTGACTGGCAGCCAAAGTGCAGCTTCCCA...TGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCAGTGTAAAAAGACACACCCCCATCATCCCACCACAAGGTGTCTGAGGTCAGGCAGGGCCAACTaGGAAGCTGCACTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQCKKTHPHHPTTRCLRSGRAN*EAALWL Trigger: CAGCCAAAGTGCAGCTTCCCAGTTGGCCCTGCCTGA...CCTCAGACACCTTGTGGTGGGATGATGGGGGTGTGTCTTTTTACACTGACTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR TCA 90 bp | ACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGAAGGTCTCCCGGGTGTaGTGGAAAGGAGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TISLCTYGPGSPYASNAKKVSRV*WKGEQA Trigger: AGCCTGCTCTCCTTTCCATCACACCCGGGAGACCTT...CTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCTCAGCCAACAAGAGCTATCCACAGACATATTaGTGCTCCCAATGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKGGPGRLILTPCSANKSYPQTY*CSQCCL Trigger: CAAGCAACATTGGGAGCATCAATATGTCTGTGGATA...GCTCTTGTTGGCTGAGCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGTCAGTGTAAAAAGACACACCCCCATCATCCCACCACAAGGTGTCTGAGGATCTGTAGCAGAGGCTaGTGTGGCTGCTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQCKKTHPHHPTTRCLRICSRG*CGCFCC Trigger: GCAGCAGAAGCAGCCACAGCAGCCTCTGCTACAGAT...CCTCAGACACCTTGTGGTGGGATGATGGGGGTGTGTCTTTTTACACTGACTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | CACTCTGCCTCCCTTCTCAGCACACAACTGTCTGTGTTTGCTCGACAAAGAATGATCTGTAGCAGAGGCTaGTGTGGCTGCTTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSASLLSTQLSVFARQRMICSRG*CGCFCC Trigger: GCAGCAGAAGCAGCCACAGCAGCCTCTGCTACAGAT...CATTCTTTGTCGAGCAAACACAGACAGTTGTGTGCTGAGAAGGGAGGCAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | ATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGCCAAAGCACCATTCTaGTTAAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHTRHRRGGGCPGQPHGHAKAPF*LSCSSR Trigger: TCTGGATGAGCAGCTTAAGCAGAATGGTGCTTTGGC...GTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCCTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCAGCCAAAGCACCATTCTaGTTAAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPWIRSTLSLPQWPVPAAAKAPF*LSCSSR Trigger: TCTGGATGAGCAGCTTAAGCAGAATGGTGCTTTGGC...TGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCAGTTTCCTGAGAGTAGATaGCGGGGGTATCCGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVCVPMVQGLLTLAMLSQFPESR*RGYPRA Trigger: AGCCCTCGGATACCCCCGGCATCTACTCTCAGGAAA...CTGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | CAGACGGACTCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCTGGCTGGTGGAACTCTaGCTAAGGGACCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTDSSKFNIWPDGVCCGLWLVEL*LRDPEQ Trigger: CTGTTCTGGGTCCCTTAGCCAGAGTTCCACCAGCCA...GAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGAGTCCGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | GACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCTTCAGTTACTTTTTGCATGTaGAAATATTTGGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DTEGEEAVLANHMATWPSVTFCM*KYLEAA Trigger: GGCTGCTTCCAAATATTTCCACATGCAAAAAGTAAC...TGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTAGAATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLEYIQDTEGEEAVLANHEAGWT*VLLWVL Trigger: AAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTC...GTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATTCTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTGTACTGGAAGCAGGCTaGACATGGGTGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSETGHTISLCTYGPGSPVLEAG*TWVLLW Trigger: CCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTAC...AGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR TCA 90 bp | CATAGCCATTTGCCTCTGCCCCAAGGTGAGGGTGCTAAAGGCAGAAAGATCCTCAGATACTTCATGTACTaGGTCCTGAGGGTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHLPLPQGEGAKGRKILRYFMY*VLRVKA Trigger: TGCCTTCACCCTCAGGACTCAGTACATGAAGTATCT...GAGGATCTTTCTGCCTTTAGCACCCTCACCTTGGGGCAGAGGCAAATGGCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAGAGTTGGCCAACATAGGCAGGCAGGAAGCCAAGGTTTGAGGATCAGAAGATACTTCATGTACTaGGTCCTGAGGGTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRVGQHRQAGSQGLRIRRYFMY*VLRVKA Trigger: TGCCTTCACCCTCAGGACTCAGTACATGAAGTATCT...TCTGATCCTCAAACCTTGGCTTCCTGCCTGCCTATGTTGGCCAACTCTCCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCTGGCGAGTTACTTTTTaGATGTGGAAATATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRHRRGGGCPGQPHGHVAWRVTF*MWKYLE Trigger: TTCCAAATATTTCCACATGCAAAAAGTAACTCGCCA...GGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGACAGAGCTCTTAGCATCCTCTTGTTCCTGAAGCTCAGCCTCAGGCAGCCATTCTGCTTAAGCTaGTCATCCAGACTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEDRALSILLFLKLSLRQPFCLS*SSRLQL Trigger: GAGCTGGAGTCTGGATGAGCAGCTTAAGCAGAATGG...CTGCCTGAGGCTGAGCTTCAGGAACAAGAGGATGCTAAGAGCTCTGTCTTCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGGGAAAGGATTCTTGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTAAGCTGCACTTTGGCTaGCAGTCAGCGTGGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGKGFLLSETGHTISLCKLHFG*QSAWAF Trigger: GAAGGCCCACGCTGACTGGCAGCCAAAGTGCAGCTT...ACACAGACTGATAGTATGACCAGTCTCAGAGAGCAAGAATCCTTTCCCTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | AATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCAACATGGGTGTTGCTCTaGGTTCTTGGCGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: NTYKTQKGRRLSWPTTWPTWVLL*VLGELL Trigger: AAGTAACTCGCCAAGAACCCAGAGCAACACCCATGT...TGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLRLVILSVCVPMVQGLEAGWT*VLLWVL Trigger: AAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTC...GAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETGHTISLCTYGPGSPYAEAGWT*VLLWVL Trigger: AAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTC...AGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| 3UTR CAA 72 bp | AGAGTTGGCCAACATAGGCAGGCAGGAAGCCAAGGTTaGAGGATCAGAAGGGAGTCTTGTTGGGTAGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RVGQHRQAGSQG*RIRRESCWVGI Trigger: GATACCTACCCAACAAGACTCCCTTCTGATCCTCAAACCTTGGCTTCCTGCCTGCCTATGTTGGCCAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCTGGCGAGTTACTTTTTaGATGTGGAAATATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGWRVTF*MWKYLE Trigger: TTCCAAATATTTCCACATGCAAAAAGTAACTCGCCA...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGTCAGTGTAAAAAGACACACCCCCATCATCCCACCACAAGGTGTCTGAGGCCATTCTGCTTAAGCTaGTCATCCAGACTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQCKKTHPHHPTTRCLRPFCLS*SSRLQL Trigger: GAGCTGGAGTCTGGATGAGCAGCTTAAGCAGAATGG...CCTCAGACACCTTGTGGTGGGATGATGGGGGTGTGTCTTTTTACACTGACTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCCATTCTGCTTAAGCTaGTCATCCAGACTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLRLVILSVCVPMVQGLPFCLS*SSRLQL Trigger: GAGCTGGAGTCTGGATGAGCAGCTTAAGCAGAATGG...GAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTGGGGTGCCTCTCTTCTaGATGAAGATGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETGHTISLCTYGPGSPYAGVPLF*MKMKRS Trigger: TGACCTCTTCATCTTCATGCAGAAGAGAGGCACCCC...AGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR GCA 90 bp | ATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAGACCTTCCCTACGGTTaGCATCGATGGCTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILSVCVPMVQGLLTLAMLDLPYG*HRWLPV Trigger: TACAGGCAGCCATCGATGGCAACCGTAGGGAAGGTC...TAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CCA 90 bp | ATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTATGGCTGGTGGAACTCTaGCTAAGGGACCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSVCVPMVQGLLTLAMLWLVEL*LRDPEQ Trigger: CTGTTCTGGGTCCCTTAGCCAGAGTTCCACCAGCCA...TAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGGAGGCCCGGGCAGACTCATCCTCACCCCATGCTCAGCCAACAAGAGCGTTACTTTTTGCATGTaGAAATATTTGGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKGGPGRLILTPCSANKSVTFCM*KYLEAA Trigger: GGCTGCTTCCAAATATTTCCACATGCAAAAAGTAAC...GCTCTTGTTGGCTGAGCATGGGGTGAGGATGAGTCTGCCCGGGCCTCCTTTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTGTTACTTTTTGCATGTaGAAATATTTGGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGIRPSQQCCARQAEVCVTFCM*KYLEAA Trigger: GGCTGCTTCCAAATATTTCCACATGCAAAAAGTAAC...ACATACCTCAGCCTGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CAA 72 bp | AGTCAGCAGTGCTGTGCTCGCCAGGCTGAGGTATGTTaGTGCATAAGCTTTTCCCTTTCTTGTCCTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SQQCCARQAEVC*CISFSLSCPRT Trigger: TGTCCTAGGACAAGAAAGGGAAAAGCTTATGCACAAACATACCTCAGCCTGGCGAGCACAGCACTGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| 3UTR CAA 72 bp | AGGGACAGGGGAACAAGCTGCCTGAGGAAAGAGTATTaGATGACTGAAAAGTCTTGCAGCACTGTCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDRGTSCLRKEY*MTEKSCSTVPV Trigger: GACAGGGACAGTGCTGCAAGACTTTTCAGTCATCAAATACTCTTTCCTCAGGCAGCTTGTTCCCCTGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGTCAGTGTAAAAAGACACACCCCCATCATCCCACCACAAGGTGTCTGAGGAGATACTTCATGTACTaGGTCCTGAGGGTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQCKKTHPHHPTTRCLRRYFMY*VLRVKA Trigger: TGCCTTCACCCTCAGGACTCAGTACATGAAGTATCT...CCTCAGACACCTTGTGGTGGGATGATGGGGGTGTGTCTTTTTACACTGACTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR GCA 90 bp | CTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTGCCAAAGCACCATTCTaGTTAAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSETGHTISLCTYGPGSPAKAPF*LSCSSR Trigger: TCTGGATGAGCAGCTTAAGCAGAATGGTGCTTTGGC...AGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCACATGGGTGTTGCTCTaGGTTCTTGGCGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLRLVILSVCVPMVQGLTWVLL*VLGELL Trigger: AAGTAACTCGCCAAGAACCCAGAGCAACACCCATGT...GAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAATTTGGCACAGGCACTaGGACTCCATCACCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLVILSVCVPMVQGLLTLIWHRH*DSITFP Trigger: AGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAAT...TAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR GCA 90 bp | AGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCCAAAGCACCATTCTaGTTAAGCTGCTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLVILSVCVPMVQGLLTLAKAPF*LSCSSR Trigger: TCTGGATGAGCAGCTTAAGCAGAATGGTGCTTTGGC...TAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGGGAAAGGATTCTTGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTGAAGAAGAAAAGCAGTaGACTCAGCTGCAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGKGFLLSETGHTISLCEEEKQ*TQLQQL Trigger: CAGCTGCTGCAGCTGAGTGCACTGCTTTTCTTCTTC...ACACAGACTGATAGTATGACCAGTCTCAGAGAGCAAGAATCCTTTCCCTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCAGTGTAAAAAGACACACCCCCATCATCCCACCACAAGGTGTCTGAGGGCCTACCTGTATAGGTaGTACCATCAATATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQCKKTHPHHPTTRCLRAYLYR*YHQYPQ Trigger: CTGTGGATATTGATGGTACCACCTATACAGGTAGGC...CCTCAGACACCTTGTGGTGGGATGATGGGGGTGTGTCTTTTTACACTGACTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR GCA 90 bp | GGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGGATCACCTCTCTTCTaGATGAAGATGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHTISLCTYGPGSPYASNGSPLF*MKMKRS Trigger: TGACCTCTTCATCTTCATGCAGAAGAGAGGTGATCC...ATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGGAAAGGATTCTTGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTACATGGGTGTTGCTCTaGGTTCTTGGCGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGKGFLLSETGHTISLCTWVLL*VLGELL Trigger: AAGTAACTCGCCAAGAACCCAGAGCAACACCCATGT...ACACAGACTGATAGTATGACCAGTCTCAGAGAGCAAGAATCCTTTCCCTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCCATGAGGTGTATCCACAGACATATTaGTGCTCCCAATGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKFNIWPDGVCCGLHEVYPQTY*CSQCCL Trigger: CAAGCAACATTGGGAGCATCAATATGTCTGTGGATA...CACCTCATGGAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR TCA 90 bp | AGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTATATCCACAGACATATTaGTGCTCCCAATGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVILSVCVPMVQGLLTLYPQTY*CSQCCL Trigger: CAAGCAACATTGGGAGCATCAATATGTCTGTGGATA...TAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR GCA 90 bp | AATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCATGGCGAGTTACTTTTTaGATGTGGAAATATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTYKTQKGRRLSWPTTWPWRVTF*MWKYLE Trigger: TTCCAAATATTTCCACATGCAAAAAGTAACTCGCCA...TGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTGTTACTTTTTGCATGTaGAAATATTTGGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSETGHTISLCTYGPGSPVTFCM*KYLEAA Trigger: GGCTGCTTCCAAATATTTCCACATGCAAAAAGTAAC...AGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCATGGCGAGTTACTTTTTaGATGTGGAAATATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLCTYGPGSPYASNAKSWRVTF*MWKYLE Trigger: TTCCAAATATTTCCACATGCAAAAAGTAACTCGCCA...TGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTATGGCGAGTTACTTTTTaGATGTGGAAATATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLVILSVCVPMVQGLLTLWRVTF*MWKYLE Trigger: TTCCAAATATTTCCACATGCAAAAAGTAACTCGCCA...TAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | GACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCCTTCAACACAGCCAGGCGATTaGGCACAGGCACTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: DTEGEEAVLANHMATWPSTQPGD*AQALGL Trigger: GAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTGT...TGAAGGCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGCAGTGAGAGCTGCTGCTGTTGCTGCTGCTGGCGCTGCTGCCAATGCTGCATGTGGAAATATTaGGAAGCAGCCTGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSSESCCCCCCWRCCQCCMWKY*EAAWAS Trigger: AGAGGCCCAGGCTGCTTCCAAATATTTCCACATGCA...GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| CDS-3UTR CAA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCTGCATGTGGAAATATTaGGAAGCAGCCTGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGCMWKY*EAAWAS Trigger: AGAGGCCCAGGCTGCTTCCAAATATTTCCACATGCA...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004780.16 ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTCCTGGGGCAGGGATAAGACCAAGTCAGCAGTGCTGTGCTCGCCATGCATGTGGAAATATTaGGAAGCAGCCTGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVSWGRDKTKSAVLCSPCMWKY*EAAWAS Trigger: AGAGGCCCAGGCTGCTTCCAAATATTTCCACATGCA...TGGCGAGCACAGCACTGCTGACTTGGTCTTATCCCTGCCCCAGGACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCCCGTGGGGCGGCTGGCACATGGGACTTCTCACTCTGCAGAGTCAAACTGTTGCTCTGGGTTCTaGGCGAGTTACTTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SCPVGRLAHGTSHSAESNCCSGF*ASYFLH Trigger: ATGCAAAAAGTAACTCGCCAAGAACCCAGAGCAACA...GTTTGACTCTGCAGAGTGAGAAGTCCCATGTGCCAGCCGCCCCACGGGGCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTACACAGCCAGGCGATTaGGCACAGGCACTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LSETGHTISLCTYGPGSPTQPGD*AQALGL Trigger: GAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTGT...AGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CAA 90 bp | TCTTCCAAATTTAACATCTGGCCAGATGGTGTCTGTTGTGGGCTCCATGAGGTGACACAGCCAGGCGATTaGGCACAGGCACTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SSKFNIWPDGVCCGLHEVTQPGD*AQALGL Trigger: GAGTCCCAGTGCCTGTGCCAAATCGCCTGGCTGTGT...CACCTCATGGAGCCCACAACAGACACCATCTGGCCAGATGTTAAATTTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | TACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACGTGGCATATCCACAGACATATaGATGCTCCCAATGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YKTQKGRRLSWPTTWPRGISTDI*MLPMLL Trigger: AAGCAACATTGGGAGCATCAATATGTCTGTGGATAT...GCCACGTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGCAGTGAGAGCTGCTGCTGTTGCTGCTGCTGGCGCTGCTGCCAATGCTTGGCGAGTTACTTTTaGCATGTGGAAATATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVSSESCCCCCCWRCCQCLASYF*HVEIFG Trigger: TCCAAATATTTCCACATGCAAAAAGTAACTCGCCAA...GCATTGGCAGCAGCGCCAGCAGCAGCAACAGCAGCAGCTCTCACTGCTCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114165.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCGATTTGGCACAGGCACTGGGACTCCATCACCTTTCCTGAGAGTAGATGCTGTTGCTCTGGGTTCTaGGCGAGTTACTTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QAIWHRHWDSITFPESRCCCSGF*ASYFLH Trigger: ATGCAAAAAGTAACTCGCCAAGAACCCAGAGCAACA...GCATCTACTCTCAGGAAAGGTGATGGAGTCCCAGTGCCTGTGCCAAATCGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114165.9 ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGTGGCCTGTTCCAGCTGCATGCCAACAGAAGACAGAGCTCTTAGCATCCTGTTGCTCTGGGTTCTaGGCGAGTTACTTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQWPVPAACQQKTELLASCCSGF*ASYFLH Trigger: ATGCAAAAAGTAACTCGCCAAGAACCCAGAGCAACA...GGATGCTAAGAGCTCTGTCTTCTGTTGGCATGCAGCTGGAACAGGCCACTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGAGACTGGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTGCATGTGGAAATATTaGGAAGCAGCCTGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSETGHTISLCTYGPGSPCMWKY*EAAWAS Trigger: AGAGGCCCAGGCTGCTTCCAAATATTTCCACATGCA...AGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACCAGTCTCAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | AGATGGCCCCACGAGACGACGTTAGGGACCAGGGACCAGTGGTATCTTGGGAGATTGGCGAGTTACTTTTaGCATGTGGAAATATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RWPHETTLGTRDQWYLGRLASYF*HVEIFG Trigger: TCCAAATATTTCCACATGCAAAAAGTAACTCGCCAA...TCTCCCAAGATACCACTGGTCCCTGGTCCCTAACGTCGTCTCGTGGGGCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTCTTGCAGCACTGTCCCTGTCACCCCTGGGTAGGAAGGGTCTATCCTTTATGTTGCTCTGGGTTCTaGGCGAGTTACTTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KVLQHCPCHPWVGRVYPLCCSGF*ASYFLH Trigger: ATGCAAAAAGTAACTCGCCAAGAACCCAGAGCAACA...TAAAGGATAGACCCTTCCTACCCAGGGGTGACAGGGACAGTGCTGCAAGACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTAGAATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACTGTTGCTCTGGGTTCTaGGCGAGTTACTTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WLEYIQDTEGEEAVLANHCCSGF*ASYFLH Trigger: ATGCAAAAAGTAACTCGCCAAGAACCCAGAGCAACA...GTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATTCTAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | ATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACATGGCCACATATCCACAGACATATaGATGCTCCCAATGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHTRHRRGGGCPGQPHGHISTDI*MLPMLL Trigger: AAGCAACATTGGGAGCATCAATATGTCTGTGGATAT...GTGGCCATGTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | ATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTATGCATGTGGAAATATTaGGAAGCAGCCTGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILSVCVPMVQGLLTLAMLCMWKY*EAAWAS Trigger: AGAGGCCCAGGCTGCTTCCAAATATTTCCACATGCA...TAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGATAAGGTCTACCCTTTCTCTACCACAGTGGCCTGTTCCAGCTGCATGCTTGGCGAGTTACTTTTaGCATGTGGAAATATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PWIRSTLSLPQWPVPAACLASYF*HVEIFG Trigger: TCCAAATATTTCCACATGCAAAAAGTAACTCGCCAA...GCATGCAGCTGGAACAGGCCACTGTGGTAGAGAAAGGGTAGACCTTATCCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004780.16 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCACTCCCTTTTGCATTATaGTGGATAGCTGGGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISLCTYGPGSPYASNAKSLPFAL*WIAGWF Trigger: GAACCACCCAGCTATCCACAATAATGCAAAAGGGAG...TGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | GGTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATTGTTGCTCTGGGTTCTaGGCGAGTTACTTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GHTISLCTYGPGSPYASNCCSGF*ASYFLH Trigger: ATGCAAAAAGTAACTCGCCAAGAACCCAGAGCAACA...ATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTAGAATACATACAAGACACAGAAGGGGAGGAGGCTGTCCTGGCCAACCACTTGGCGAGTTACTTTTaGCATGTGGAAATATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLEYIQDTEGEEAVLANHLASYF*HVEIFG Trigger: TCCAAATATTTCCACATGCAAAAAGTAACTCGCCAA...GTGGTTGGCCAGGACAGCCTCCTCCCCTTCTGTGTCTTGTATGTATTCTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164010.8 ENSMUST00000171444.8 |
||
| CDS-3UTR CAA 90 bp | GTCATACTATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGATATCCACAGACATATaGATGCTCCCAATGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VILSVCVPMVQGLLTLAMISTDI*MLPMLL Trigger: AAGCAACATTGGGAGCATCAATATGTCTGTGGATAT...CATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGATAGTATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098686.4 |
||
| CDS-3UTR CAA 90 bp | ATCAGTCTGTGTACCTATGGTCCAGGGTCTCCTTACGCTAGCAATGCTAAGTCATTGGCGAGTTACTTTTaGCATGTGGAAATATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISLCTYGPGSPYASNAKSLASYF*HVEIFG Trigger: TCCAAATATTTCCACATGCAAAAAGTAACTCGCCAA...TGACTTAGCATTGCTAGCGTAAGGAGACCCTGGACCATAGGTACACAGACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCAGGGAAAGGATTCTTGCTCTCTGAGACTGGTCATACTATCAGTCTGTGTTTGGCGAGTTACTTTTaGCATGTGGAAATATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSGKGFLLSETGHTISLCLASYF*HVEIFG Trigger: TCCAAATATTTCCACATGCAAAAAGTAACTCGCCAA...ACACAGACTGATAGTATGACCAGTCTCAGAGAGCAAGAATCCTTTCCCTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098686.4 ENSMUST00000164035.8 |
||
| CDS CCA 72 bp | GTGGTGAAAGTCCGGGTACTGGAAGCAGGCTGGACATaGGTGTTGCTCTGGGTTCTTGGCGAGTTACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VVKVRVLEAGWT*VLLWVLGELLF Trigger: AAAAAGTAACTCGCCAAGAACCCAGAGCAACACCCATGTCCAGCCTGCTTCCAGTACCCGGACTTTCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000004780.16 ENSMUST00000098686.4 ENSMUST00000114165.9 ENSMUST00000164010.8 ENSMUST00000164035.8 ENSMUST00000171444.8 |
||
| CDS CCA 72 bp | GGGTGCCAGACTCCCTTTTGCATTATTGTGGATAGCTaGGTGGTTCCAGGGTATTTAATGACAATTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: GCQTPFCIIVDS*VVPGYLMTIRD Trigger: ATCTCTAATTGTCATTAAATACCCTGGAACCACCCAGCTATCCACAATAATGCAAAAGGGAGTCTGGCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164035.8 |
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