RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARID1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069729

Ensembl transcript IDs: ENSMUST00000092723.11, ENSMUST00000115797.9, ENSMUST00000115799.2, ENSMUST00000232180.2

Found 1273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCAGTAGTGAGAGGCAGAAGGTCGTGGTTTCAGGCCAGTTAGCTTaGAGGGCCCCATGTCACAGTGGGTTGGCAGCCACCACCCATCCA +
Preference number: 1 (lower is better)
Translates to: ISSERQKVVVSGQLA*RAPCHSGLAATTHP
Trigger: TGGATGGGTGGTGGCTGCCAACCCACTGTGACATGGGGCCCTGCAAGCTAACTGGCCTGAAACCACGACCTTCTGCCTCTCACTACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp GGTCGTGGTTTCAGGCCAGTTAGCTTGCAGGGCCCCATGTCACAGTaGGTTGGCAGCCACCACCCATCCATGAGGGAATTACCACTTCTC +
Preference number: 1 (lower is better)
Translates to: GRGFRPVSLQGPMSQ*VGSHHPSMRELPLL
Trigger: GAGAAGTGGTAATTCCCTCATGGATGGGTGGTGGCTGCCAACCCACTGTGACATGGGGCCCTGCAAGCTAACTGGCCTGAAACCACGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp GTGAAGCAAAGGGTGACTCTTTCGTGGGCTTCCAGGAGTCGGATCTaGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGAGAGCT +
Preference number: 1 (lower is better)
Translates to: VKQRVTLSWASRSRI*VNGGRAGTRLPRRA
Trigger: AGCTCTCCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAAAGAGTCACCCTTTGCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp CCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCCACATCCTTGTaGGCTGAGCACACAGGGCAGCAGCAGCACATAGTTGGAGACGGG +
Preference number: 1 (lower is better)
Translates to: PSKKQGVVYPVSTSL*AEHTGQQQHIVGDG
Trigger: CCCGTCTCCAACTATGTGCTGCTGCTGCCCTGTGTGCTCAGCCCACAAGGATGTGGAGACTGGATAGACAACCCCTTGCTTCTTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp GCCACAGCAGACATGGCGGTCGTGGTGAGGAAGCGATCCTGCTGTTaGCTGCTAGGAGTGGATTTTTGCACCTATCTGAGAGCGCTGTTT +
Preference number: 1 (lower is better)
Translates to: ATADMAVVVRKRSCC*LLGVDFCTYLRALF
Trigger: AAACAGCGCTCTCAGATAGGTGCAAAAATCCACTCCTAGCAGCCAACAGCAGGATCGCTTCCTCACCACGACCGCCATGTCTGCTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp AACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTaGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: NSVSSGNVKQRVTLS*ASRSRIWVNGGRAG
Trigger: GCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp TTCTCTTGGATGCATGAGGGACGTAGGCTGGTAGCTCTGGGCACTTaGCTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGG +
Preference number: 1 (lower is better)
Translates to: FSWMHEGRRLVALGT*LDCKELSTTQQEAR
Trigger: CCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGTCAAGTGCCCAGAGCTACCAGCCTACGTCCCTCATGCATCCAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp TGCAGGGCCCCATGTCACAGTGGGTTGGCAGCCACCACCCATCCATaGGGGAATTACCACTTCTCAATGTCACCAGAGTTAATTGCTTCA +
Preference number: 1 (lower is better)
Translates to: CRAPCHSGLAATTHP*GNYHFSMSPELIAS
Trigger: TGAAGCAATTAACTCTGGTGACATTGAGAAGTGGTAATTCCCTCATGGATGGGTGGTGGCTGCCAACCCACTGTGACATGGGGCCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp CTCAGGGCAAACGATATCCAGTTCTCAGAAGCTGCAGTTAGGAGCTaGCATTGTATAAGACCACCCACGGCCCCTGTCAAAAACAAGTCT +
Preference number: 1 (lower is better)
Translates to: LRANDIQFSEAAVRS*HCIRPPTAPVKNKS
Trigger: AGACTTGTTTTTGACAGGGGCCGTGGGTGGTCTTATACAATGCCAGCTCCTAACTGCAGCTTCTGAGAACTGGATATCGTTTGCCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp TGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTaGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAG +
Preference number: 1 (lower is better)
Translates to: WAASWFISQSDSPQA*KEGGIFCPKFCSTE
Trigger: CTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp TGGGCCTGGCTGCTATACAGCCACTTGTCTTTGAGACCACTCTTCTaGCAGGGAACTGAGCCTGTCTATACCTTTCATTCATTGTCTGCA +
Preference number: 1 (lower is better)
Translates to: WAWLLYSHLSLRPLF*QGTEPVYTFHSLSA
Trigger: TGCAGACAATGAATGAAAGGTATAGACAGGCTCAGTTCCCTGTCAGAAGAGTGGTCTCAAAGACAAGTGGCTGTATAGCAGCCAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR GCA 90 bp CTTTCTCGTGACACCAGAATAACATCTCCTAGTGTTGTAAGTGTGTaGTCCTGTCTAACTCTTCCAGATGTCAGCGTGAGCAAGGTGGGC +
Preference number: 1 (lower is better)
Translates to: LSRDTRITSPSVVSV*SCLTLPDVSVSKVG
Trigger: GCCCACCTTGCTCACGCTGACATCTGGAAGAGTTAGACAGGAGCACACACTTACAACACTAGGAGATGTTATTCTGGTGTCACGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp CCAACGTTAATTTGGAGTTCTGAGACTTCAGAGGACCTTGTGATTTaGGTGGGGTGTGAAATGGGGGCTGGAGGAAGCAGGAGTATAAAG +
Preference number: 1 (lower is better)
Translates to: PTLIWSSETSEDLVI*VGCEMGAGGSRSIK
Trigger: CTTTATACTCCTGCTTCCTCCAGCCCCCATTTCACACCCCACCCAAATCACAAGGTCCTCTGAAGTCTCAGAACTCCAAATTAACGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp AATTGTTGCTCCCACTCTCAAGTAGGAAACCCTGAAAGTCCCTTCTaGCCTTTGGGCATCATTACCAGGAAGCAGTTGTTACATCTTCCC +
Preference number: 1 (lower is better)
Translates to: NCCSHSQVGNPESPF*PLGIITRKQLLHLP
Trigger: GGGAAGATGTAACAACTGCTTCCTGGTAATGATGCCCAAAGGCCAGAAGGGACTTTCAGGGTTTCCTACTTGAGAGTGGGAGCAACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp TCTGAGAAAATCAAATTGTTGCTCCCACTCTCAAGTAGGAAACCCTaGAAGTCCCTTCTGGCCTTTGGGCATCATTACCAGGAAGCAGTT +
Preference number: 1 (lower is better)
Translates to: SEKIKLLLPLSSRKP*KSLLAFGHHYQEAV
Trigger: AACTGCTTCCTGGTAATGATGCCCAAAGGCCAGAAGGGACTTTCAGGGTTTCCTACTTGAGAGTGGGAGCAACAATTTGATTTTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp AAGCAGGAGTATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATaGTTTTGCGGGTTCTGTAGTCCCAGACCTGATTACTGGTTTGGG +
Preference number: 1 (lower is better)
Translates to: KQEYKESTGFETACV*FCGFCSPRPDYWFG
Trigger: CCCAAACCAGTAATCAGGTCTGGGACTACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTATACTCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp GCTATACAGCCACTTGTCTTTGAGACCACTCTTCTGACAGGGAACTaGGCCTGTCTATACCTTTCATTCATTGTCTGCAAGAGCAAGATT +
Preference number: 1 (lower is better)
Translates to: AIQPLVFETTLLTGN*ACLYLSFIVCKSKI
Trigger: AATCTTGCTCTTGCAGACAATGAATGAAAGGTATAGACAGGCTCAGTTCCCTGTCAGAAGAGTGGTCTCAAAGACAAGTGGCTGTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 90 bp CAATCTGTATGCAACCATTTCCACACTTTGATTCATGAAGCAAACTaGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACATACAG +
Preference number: 1 (lower is better)
Translates to: QSVCNHFHTLIHEAN*DQPLSQQSMTLYIQ
Trigger: CTGTATGTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTTGCATACAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp TTTTCTAAATCAATCTGTATGCAACCATTTCCACACTTTGATTCATaGAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTT +
Preference number: 1 (lower is better)
Translates to: FSKSICMQPFPHFDS*SKLGSAALPTEHDF
Trigger: AAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTTGCATACAGATTGATTTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 90 bp CTGAAACAGAATCATCACTTGGCACTATACACACGGCATACAATATaGCACGTTCTCTTTAACATTGCACAATATAAATATTATACACGC +
Preference number: 1 (lower is better)
Translates to: LKQNHHLALYTRHTI*HVLFNIAQYKYYTR
Trigger: GCGTGTATAATATTTATATTGTGCAATGTTAAAGAGAACGTGTCATATTGTATGCCGTGTGTATAGTGCCAAGTGATGATTCTGTTTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTTGTCCCGTGGAGGCTaGGCCACAGCAGACATGGCG +
Preference number: 2 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRLSRGG*ATADMA
Trigger: CGCCATGTCTGCTGTGGCTCAGCCTCCACGGGACAA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGCACTTTCCATCAGGGTaGGGTATTAGAGAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRHFPSG*GIREPG
Trigger: CCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTG...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGGAGTCGGATCTGGGTaGATGGAGGGAGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGGVGSG*MEGGQA
Trigger: TGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 90 bp AGCCACAGCAGACATGGCGGTCGTGGTGAGGAAGCGATCCTGCTGTaGGCTGCTAGGAGTGGATTTTTGCACCTATCTGAGAGCGCTGTT +
Preference number: 2 (lower is better)
Translates to: SHSRHGGRGEEAILL*AARSGFLHLSESAV
Trigger: AACAGCGCTCTCAGATAGGTGCAAAAATCCACTCCTAGCAGCCAACAGCAGGATCGCTTCCTCACCACGACCGCCATGTCTGCTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 90 bp CAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCCACATCCTaGTGGGCTGAGCACACAGGGCAGCAGCAGCACATAGTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: QPSKKQGVVYPVSTS*WAEHTGQQQHIVGD
Trigger: GTCTCCAACTATGTGCTGCTGCTGCCCTGTGTGCTCAGCCCACAAGGATGTGGAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTaGTCTATCCAGTCTCCACATCCTTGTGGGCTGAGCACACAGGGC +
Preference number: 2 (lower is better)
Translates to: TGLQRTQHNPARSKG*SIQSPHPCGLSTQG
Trigger: GCCCTGTGTGCTCAGCCCACAAGGATGTGGAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCACATCCTTGTGGGCTaGGCACACAGGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFHILVG*AHRAAA
Trigger: TGCTGCTGCCCTGTGTGCTCAGCCCACAAGGATGTG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGGCCACCACCCATCCATaGGGGAATTACCACTTCTCA +
Preference number: 2 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLATTHP*GNYHFS
Trigger: TGAGAAGTGGTAATTCCCTCATGGATGGGTGGTGGC...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGTGGGGGCTGCTTGGTaGTGGGACTGTTTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAVGAAW*WDCLQE
Trigger: TTCCTGCAAACAGTCCCATCACCAAGCAGCCCCCAC...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGACCCTGACTACTGCTaGCATACCTCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: CKELSTTQQEARGCLSSLDPDYC*HTSFSP
Trigger: GGGGCTGAAGGAGGTATGGCAGCAGTAGTCAGGGTC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGACCCTGACTACTGCTaGCATACCTCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GRKGHQQHGYVSFNETERDPDYC*HTSFSP
Trigger: GGGGCTGAAGGAGGTATGGCAGCAGTAGTCAGGGTC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGGTGTTAGTGTGTGCTaGGAGGCTGTTCTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFGVSVC*EAVLGL
Trigger: CAGGCCCAGAACAGCCTCGCAGCACACACTAACACC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGCCACCACCCATCCATaGGGGAATTACCACTTCTCA +
Preference number: 2 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFATTHP*GNYHFS
Trigger: TGAGAAGTGGTAATTCCCTCATGGATGGGTGGTGGC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCTTGAGACCACTCTTCTaGCAGGGAACTGAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: TGLQRTQHNPARSKGLSILRPLF*QGTEPV
Trigger: GACAGGCTCAGTTCCCTGTCAGAAGAGTGGTCTCAA...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGAAATATTATACACGCTaGAGCAAACTAACGCAGAGT +
Preference number: 2 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRKYYTR*SKLTQS
Trigger: ACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCACAGCCACTTGTCTTTaGGACCACTCTTCTGACAGG +
Preference number: 2 (lower is better)
Translates to: CKELSTTQQEARGCLSSLTATCL*DHSSDR
Trigger: CCTGTCAGAAGAGTGGTCTCAAAGACAAGTGGCTGT...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGCTGCAGTTAGGAGCTaGCATTGTATAAGACCACCC +
Preference number: 2 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIAAVRS*HCIRPP
Trigger: GGGTGGTCTTATACAATGCCAGCTCCTAACTGCAGC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCTCAAGTAGGAAACCCTaGAAGTCCCTTCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: TGLQRTQHNPARSKGLSISSRKP*KSLLAF
Trigger: AAAGGCCAGAAGGGACTTTCAGGGTTTCCTACTTGA...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTTCAAGTAGGAAACCCTaGAAGTCCCTTCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: GRKGHQQHGYVSFNETERSSRKP*KSLLAF
Trigger: AAAGGCCAGAAGGGACTTTCAGGGTTTCCTACTTGA...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGATTGTGACCTTTGAATaGACTAGACGGCAACTTTGG +
Preference number: 2 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLIVTFE*TRRQLW
Trigger: CCAAAGTTGCCGTCTAGTGCATTCAAAGGTCACAAT...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCATTCATGAAGCAAACTaGGATCAGCCGCTCTCCCAA +
Preference number: 2 (lower is better)
Translates to: CKELSTTQQEARGCLSSLIHEAN*DQPLSQ
Trigger: TTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTATTCATGAAGCAAACTaGGATCAGCCGCTCTCCCAA +
Preference number: 2 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAIHEAN*DQPLSQ
Trigger: TTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGCTGCGAGGCTGTTCTaGGCCTGGCTGCTATACAGC +
Preference number: 2 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVAARLF*AWLLYS
Trigger: GCTGTATAGCAGCCAGGCCCAGAACAGCCTCGCAGC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTTTGACCCAGTGTGGTaGCATTTTTCTATCTTAGCA +
Preference number: 2 (lower is better)
Translates to: WDWAASWFISQSDSPQAWFDPVW*HFSILA
Trigger: TGCTAAGATAGAAAAATGTCACCACACTGGGTCAAA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGTGGGGGCTGCTTGGTaGTGGGACTGTTTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVVGAAW*WDCLQE
Trigger: TTCCTGCAAACAGTCCCATCACCAAGCAGCCCCCAC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGGTGATGGGACTGTTTaGAGGAAAAACCAATTTCTT +
Preference number: 2 (lower is better)
Translates to: WDWAASWFISQSDSPQAWGDGTV*RKNQFL
Trigger: AAGAAATTGGTTTTTCCTGCAAACAGTCCCATCACC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCAGAGTATGGGCATCCTaGAAATTTCTGAAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: CKELSTTQQEARGCLSSLRVWAS*KFLKAL
Trigger: CAGGGCTTTCAGAAATTTGCAGGATGCCCATACTCT...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTATCGGATCTGGGTGAATaGAGGGAGGGCAGGCACAAG +
Preference number: 2 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVSDLGE*REGRHK
Trigger: CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGA...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGAACCTGGGAGCCATTaGTTATCTTTTCACATCCCA +
Preference number: 2 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFEPGSH*LSFHIP
Trigger: TGGGATGTGAAAAGATAACCAATGGCTCCCAGGTTC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCACAGCCAGTTATATGTaGCCCTCTAATGTTCACTCA +
Preference number: 2 (lower is better)
Translates to: TGLQRTQHNPARSKGLSITASYM*PSNVHS
Trigger: TGAGTGAACATTAGAGGGTCACATATAACTGGCTGT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTAAGGAAGGTATGCTCTaGAACAGAATCATCACTTGG +
Preference number: 2 (lower is better)
Translates to: GRKGHQQHGYVSFNETERKEGML*NRIITW
Trigger: CCAAGTGATGATTCTGTTTCAGAGCATACCTTCCTT...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCTTTGACCCAGTGTGGTaGCATTTTTCTATCTTAGCA +
Preference number: 2 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFFDPVW*HFSILA
Trigger: TGCTAAGATAGAAAAATGTCACCACACTGGGTCAAA...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGCTAAATCAATCTGTATaGAACCATTTCCACACTTTG +
Preference number: 2 (lower is better)
Translates to: WDWAASWFISQSDSPQAWLNQSV*NHFHTL
Trigger: CAAAGTGTGGAAATGGTTGCATACAGATTGATTTAG...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGGTGATGGGACTGTTTaGAGGAAAAACCAATTTCTT +
Preference number: 2 (lower is better)
Translates to: CKELSTTQQEARGCLSSLGDGTV*RKNQFL
Trigger: AAGAAATTGGTTTTTCCTGCAAACAGTCCCATCACC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 90 bp GGTGTCCATTTTCTAAATCAATCTGTATGCAACCATTTCCACACTTaGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGC +
Preference number: 2 (lower is better)
Translates to: GVHFLNQSVCNHFHT*IHEANWDQPLSQQS
Trigger: GCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTTGCATACAGATTGATTTAGAAAATGGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGAACACCCATCACAGTaGGTAACAAGATTTAATGTA +
Preference number: 2 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIEHPSQ*VTRFNV
Trigger: TACATTAAATCTTGTTACGCACTGTGATGGGTGTTC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCCTAAATCAATCTGTATaGAACCATTTCCACACTTTG +
Preference number: 2 (lower is better)
Translates to: CKELSTTQQEARGCLSSLLNQSV*NHFHTL
Trigger: CAAAGTGTGGAAATGGTTGCATACAGATTGATTTAG...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTACAGCCAGTTATATGTaGCCCTCTAATGTTCACTCA +
Preference number: 2 (lower is better)
Translates to: SFYCTELWVTGCSLAFIITASYM*PSNVHS
Trigger: TGAGTGAACATTAGAGGGTCACATATAACTGGCTGT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAACCATTTCCACACTTTaGTTCATGAAGCAAACTGGG +
Preference number: 2 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRTISTL*FMKQTG
Trigger: CCCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGT...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTATTGTGACCTTTGAATaGACTAGACGGCAACTTTGG +
Preference number: 2 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIIVTFE*TRRQLW
Trigger: CCAAAGTTGCCGTCTAGTGCATTCAAAGGTCACAAT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATCTAGAAGTTTCTATTaGACAGAGCTTTGGGTGACG +
Preference number: 2 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRSRSFY*TELWVT
Trigger: CGTCACCCAAAGCTCTGTGCAATAGAAACTTCTAGA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 90 bp TACCAGGAAGCAGTTGTTACATCTTCCCTATTTCCTGTAAATAACTaGGTTACTATGGCAACCATGCTAGGCAAACTAGAACAGCATTCA +
Preference number: 2 (lower is better)
Translates to: YQEAVVTSSLFPVNN*VTMATMLGKLEQHS
Trigger: TGAATGCTGTTCTAGTTTGCCTAGCATGGTTGCCATAGTAACCAAGTTATTTACAGGAAATAGGGAAGATGTAACAACTGCTTCCTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGAACACCCATCACAGTaGGTAACAAGATTTAATGTA +
Preference number: 2 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHREHPSQ*VTRFNV
Trigger: TACATTAAATCTTGTTACGCACTGTGATGGGTGTTC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACAGCCAGTTATATGTaGCCCTCTAATGTTCACTCA +
Preference number: 2 (lower is better)
Translates to: KETENRQRMYLYTQTANITASYM*PSNVHS
Trigger: TGAGTGAACATTAGAGGGTCACATATAACTGGCTGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
3UTR CAA 90 bp CTATACCTTTCATTCATTGTCTGCAAGAGCAAGATTAGGATTCCATaGAACTCTCTCTTGCACTCTCCATATTTTCATCACAGAACACTA +
Preference number: 2 (lower is better)
Translates to: LYLSFIVCKSKIRIP*NSLLHSPYFHHRTL
Trigger: TAGTGTTCTGTGATGAAAATATGGAGAGTGCAAGAGAGAGTTCAATGGAATCCTAATCTTGCTCTTGCAGACAATGAATGAAAGGTATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCAAGAAACATGACGGGTaGAGACTTGGGTTAAATCAG +
Preference number: 2 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLKKHDG*RLGLNQ
Trigger: CTGATTTAACCCAAGTCTGCACCCGTCATGTTTCTT...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTACTAAGTAATGAGAACTaGTTGACTTGTCTGTTAAAC +
Preference number: 2 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVLSNEN*LTCLLN
Trigger: GTTTAACAGACAAGTCAACCAGTTCTCATTACTTAG...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCCTTCTTCTTACACTaGATAAACGAGAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: KETENRQRMYLYTQTANISFFLH*INENRK
Trigger: TTTTCTGTTCTCGTTTATCCAGTGTAAGAAGAAGGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
3UTR GCA 72 bp GGAGAGCTCAGACACCCGCTTGGTGTTAGTGTGTGCTaGGAGGCTGTTCTGGGCCTGGCTGCTATACAGCCA +
Preference number: 3 (lower is better)
Translates to: GELRHPLGVSVC*EAVLGLAAIQP
Trigger: TGGCTGTATAGCAGCCAGGCCCAGAACAGCCTCGCAGCACACACTAACACCAAGCGGGTGTCTGAGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp AGGGTGACTCTTTCGTGGGCTTCCAGGAGTCGGATCTaGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: RVTLSWASRSRI*VNGGRAGTRLP
Trigger: AGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAAAGAGTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGAGTCCCTTCTGGCCTTaGGGCATCATTACCAGGAAG +
Preference number: 3 (lower is better)
Translates to: FVGFQESDLGEWREGRHKSPFWP*GIITRK
Trigger: CTTCCTGGTAATGATGCCCAAAGGCCAGAAGGGACT...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR GCA 72 bp CTAGGAGAGCTCAGACACCCGCTTGGTGTTAGTGTGTaGTGCGAGGCTGTTCTGGGCCTGGCTGCTATACAG +
Preference number: 3 (lower is better)
Translates to: LGELRHPLGVSV*CEAVLGLAAIQ
Trigger: CTGTATAGCAGCCAGGCCCAGAACAGCCTCGCAGCACACACTAACACCAAGCGGGTGTCTGAGCTCTCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGCCAGTCTCCACATCCTaGTGGGCTGAGCACACAGGG +
Preference number: 3 (lower is better)
Translates to: WDWAASWFISQSDSPQAWPVSTS*WAEHTG
Trigger: CCCTGTGTGCTCAGCCCACAAGGATGTGGAGACTGG...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp ACCCGCTTGGTGTTAGTGTGTGCTGCGAGGCTGTTCTaGGCCTGGCTGCTATACAGCCACTTGTCTTTGAGA +
Preference number: 3 (lower is better)
Translates to: TRLVLVCAARLF*AWLLYSHLSLR
Trigger: TCTCAAAGACAAGTGGCTGTATAGCAGCCAGGCCCAGAACAGCCTCGCAGCACACACTAACACCAAGCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp ATGCATGAGGGACGTAGGCTGGTAGCTCTGGGCACTTaGCTGGACTGCAAAGAACTCAGCACAACCCAGCAA +
Preference number: 3 (lower is better)
Translates to: MHEGRRLVALGT*LDCKELSTTQQ
Trigger: TTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGTCAAGTGCCCAGAGCTACCAGCCTACGTCCCTCATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp TCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTaGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGG +
Preference number: 3 (lower is better)
Translates to: SSGNVKQRVTLS*ASRSRIWVNGG
Trigger: CCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGAAGCGATCCTGCTGTaGGCTGCTAGGAGTGGATTT +
Preference number: 3 (lower is better)
Translates to: WDWAASWFISQSDSPQAWEAILL*AARSGF
Trigger: AAATCCACTCCTAGCAGCCAACAGCAGGATCGCTTC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp TGTTCTGGGCCTGGCTGCTATACAGCCACTTGTCTTTaGGACCACTCTTCTGACAGGGAACTGAGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: CSGPGCYTATCL*DHSSDRELSLS
Trigger: AGACAGGCTCAGTTCCCTGTCAGAAGAGTGGTCTCAAAGACAAGTGGCTGTATAGCAGCCAGGCCCAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp GTGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTaGTTCTCCCCAGGCCTGGAAGGAAGGTGGGATCTT +
Preference number: 3 (lower is better)
Translates to: VGLGSIMVYLTV*FSPGLEGRWDL
Trigger: AAGATCCCACCTTCCTTCCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp AACCTGGGAGCCATTGGTTATCTTTTCACATCCCAGTaGGAAGCCCAAGAGGGAGCGAGACATAGTTCAGGC +
Preference number: 3 (lower is better)
Translates to: NLGAIGYLFTSQ*EAQEGARHSSG
Trigger: GCCTGAACTATGTCTCGCTCCCTCTTGGGCTTCCCACTGGGATGTGAAAAGATAACCAATGGCTCCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTCTGAGAAAATCAAATaGTTGCTCCCACTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: FVGFQESDLGEWREGRHKSEKIK*LLPLSS
Trigger: ACTTGAGAGTGGGAGCAACAATTTGATTTTCTCAGA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGAAGATTAGGATTCCATaGAACTCTCTCTTGCACTCT +
Preference number: 3 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRKIRIP*NSLLHS
Trigger: AGAGTGCAAGAGAGAGTTCAATGGAATCCTAATCTT...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTCTATTGCACAGAGCTTaGGGTGACGGGGTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWALLHRA*GDGVQF
Trigger: AAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAG...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCTATTGCACAGAGCTTaGGGTGACGGGGTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFLLHRA*GDGVQF
Trigger: AAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp ATATCCGGCAACCTGTTTCTCTATTCCCGAGGCCTTTaGTTCCCCAGAAAATACTGTGGCAGAAGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: ISGNLFLYSRGL*FPRKYCGRSQS
Trigger: ACTCTGGCTTCTGCCACAGTATTTTCTGGGGAACCAAAGGCCTCGGGAATAGAGAAACAGGTTGCCGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR GCA 72 bp GGCAAAGGAATAATATACACATACCAGGCAAAGGGATaGAGGACTTACACACCCAGCAACTCCTCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: GKGIIYTYQAKG*RTYTPSNSSKA
Trigger: GGCTTTGGAGGAGTTGCTGGGTGTGTAAGTCCTGCATCCCTTTGCCTGGTATGTGTATATTATTCCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp TCCCACTCTCAAGTAGGAAACCCTGAAAGTCCCTTCTaGCCTTTGGGCATCATTACCAGGAAGCAGTTGTTA +
Preference number: 3 (lower is better)
Translates to: SHSQVGNPESPF*PLGIITRKQLL
Trigger: TAACAACTGCTTCCTGGTAATGATGCCCAAAGGCCAGAAGGGACTTTCAGGGTTTCCTACTTGAGAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGATTACCAGGAAGCAGTaGTTACATCTTCCCTATTTC +
Preference number: 3 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLITRKQ*LHLPYF
Trigger: GAAATAGGGAAGATGTAACAACTGCTTCCTGGTAAT...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGAGAAAATCAAATTGTaGCTCCCACTCTCAAGTAGG +
Preference number: 3 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGEKIKL*LPLSSR
Trigger: CCTACTTGAGAGTGGGAGCAACAATTTGATTTTCTC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTCTGAGAAAATCAAATaGTTGCTCCCACTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: WDWAASWFISQSDSPQAWSEKIK*LLPLSS
Trigger: ACTTGAGAGTGGGAGCAACAATTTGATTTTCTCAGA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGAAGCGATCCTGCTGTaGGCTGCTAGGAGTGGATTT +
Preference number: 3 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHREAILL*AARSGF
Trigger: AAATCCACTCCTAGCAGCCAACAGCAGGATCGCTTC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCAAACAGAATCATCACTaGGCACTATACACACGGCAT +
Preference number: 3 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIKQNHH*ALYTRH
Trigger: ATGCCGTGTGTATAGTGCCAAGTGATGATTCTGTTT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR GCA 72 bp CTTCAGCCCCTACACTATATCTCTAGAAGTTTCTATTaGACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCT +
Preference number: 3 (lower is better)
Translates to: LQPLHYISRSFY*TELWVTGCSLA
Trigger: AGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACTTCTAGAGATATAGTGTAGGGGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp TCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTaGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGT +
Preference number: 3 (lower is better)
Translates to: SWFISQSDSPQA*KEGGIFCPKFC
Trigger: ACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCAAGATTAGGATTCCATaGAACTCTCTCTTGCACTCT +
Preference number: 3 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFKIRIP*NSLLHS
Trigger: AGAGTGCAAGAGAGAGTTCAATGGAATCCTAATCTT...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGGTAGCTCTGGGCACTaGACTGGACTGCAAAGAACT +
Preference number: 3 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVGSSGH*TGLQRT
Trigger: AGTTCTTTGCAGTCCAGTCAAGTGCCCAGAGCTACC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp TCAATCTGTATGCAACCATTTCCACACTTTGATTCATaGAGCAAACTGGGATCAGCCGCTCTCCCAACAGAG +
Preference number: 3 (lower is better)
Translates to: SICMQPFPHFDS*SKLGSAALPTE
Trigger: CTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTTGCATACAGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp CCACTTGTCTTTGAGACCACTCTTCTGACAGGGAACTaGGCCTGTCTATACCTTTCATTCATTGTCTGCAAG +
Preference number: 3 (lower is better)
Translates to: PLVFETTLLTGN*ACLYLSFIVCK
Trigger: CTTGCAGACAATGAATGAAAGGTATAGACAGGCTCAGTTCCCTGTCAGAAGAGTGGTCTCAAAGACAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp CTGCTATACAGCCACTTGTCTTTGAGACCACTCTTCTaGCAGGGAACTGAGCCTGTCTATACCTTTCATTCA +
Preference number: 3 (lower is better)
Translates to: LLYSHLSLRPLF*QGTEPVYTFHS
Trigger: TGAATGAAAGGTATAGACAGGCTCAGTTCCCTGTCAGAAGAGTGGTCTCAAAGACAAGTGGCTGTATAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp TGCAACCATTTCCACACTTTGATTCATGAAGCAAACTaGGATCAGCCGCTCTCCCAACAGAGCATGACTTTA +
Preference number: 3 (lower is better)
Translates to: CNHFHTLIHEAN*DQPLSQQSMTL
Trigger: TAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp AGTTCCAGGCTCACAAAGAAAACACTCAAGACAAACTaGTCAGTATGGCTTAGACTTCCAGGATATCCGGCA +
Preference number: 3 (lower is better)
Translates to: SSRLTKKTLKTN*SVWLRLPGYPA
Trigger: TGCCGGATATCCTGGAAGTCTAAGCCATACTGACCAGTTTGTCTTGAGTGTTTTCTTTGTGAGCCTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp AAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATaGCTTTATACATACAGAAACTTGTACATTACCCTC +
Preference number: 3 (lower is better)
Translates to: KQTGISRSPNRA*LYTYRNLYITL
Trigger: GAGGGTAATGTACAAGTTTCTGTATGTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp CTGGATAAACGAGAACAGAAAACAGCCAGTTATATGTaGCCCTCTAATGTTCACTCACACATGTGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: LDKREQKTASYM*PSNVHSHMCAF
Trigger: GAAGGCACACATGTGTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
3UTR TCA 72 bp TATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATaGTTTTGCGGGTTCTGTAGTCCCAGACCTGATTAC +
Preference number: 3 (lower is better)
Translates to: YKESTGFETACV*FCGFCSPRPDY
Trigger: GTAATCAGGTCTGGGACTACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp AGGCCATTCGCCTCAACTGTTAAAAGTCACCAGCTATaGCAGGAAATAGAAACAGTCTCTCAGGCCTTATTT +
Preference number: 3 (lower is better)
Translates to: RPFASTVKSHQL*QEIETVSQALF
Trigger: AAATAAGGCCTGAGAGACTGTTTCTATTTCCTGTCATAGCTGGTGACTTTTAACAGTTGAGGCGAATGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAATGATGAAAGAAATCTaGAAGCTTTGTCCCGTGGAG +
Preference number: 3 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRMMKEI*KLCPVE
Trigger: CTCCACGGGACAAAGCTTCAAGATTTCTTTCATCAT...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCAGTCCCTTCTGGCCTTaGGGCATCATTACCAGGAAG +
Preference number: 3 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLSPFWP*GIITRK
Trigger: CTTCCTGGTAATGATGCCCAAAGGCCAGAAGGGACT...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp GGAAGACAGATGAGTTTCATAGTTTTGACAATTTGGTaGTCTCCCACCAACTCCCAATTTTCTCCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: GRQMSFIVLTIW*SPTNSQFSPQH
Trigger: ATGCTGAGGAGAAAATTGGGAGTTGGTGGGAGATCACCAAATTGTCAAAACTATGAAACTCATCTGTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAAACCATTTCCACACTTaGATTCATGAAGCAAACTGG +
Preference number: 3 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRNHFHT*IHEANW
Trigger: CCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTT...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR-3UTR CAA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAAACCATTTCCACACTTaGATTCATGAAGCAAACTGG +
Preference number: 3 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVNHFHT*IHEANW
Trigger: CCAGTTTGCTTCATGAATCAAAGTGTGGAAATGGTT...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR TCA 72 bp CATTCATTGTCTGCAAGAGCAAGATTAGGATTCCATTaGACTCTCTCTTGCACTCTCCATATTTTCATCACA +
Preference number: 3 (lower is better)
Translates to: HSLSARARLGFH*TLSCTLHIFIT
Trigger: TGTGATGAAAATATGGAGAGTGCAAGAGAGAGTTCAATGGAATCCTAATCTTGCTCTTGCAGACAATGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CCA 72 bp AACACATTCAATAGAATCCTTAGCAGTTCAACAGAGTaGACAAAGACACTGAAGTTAAACGATTTAAGTCTC +
Preference number: 3 (lower is better)
Translates to: NTFNRILSSSTE*TKTLKLNDLSL
Trigger: GAGACTTAAATCGTTTAACTTCAGTGTCTTTGTCCACTCTGTTGAACTGCTAAGGATTCTATTGAATGTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGCCTGGGATCTGCCCATaGTCGGTCCGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKPGICP*SVRGCR
Trigger: CCGGCACCCCCGGACCGACCATGGGCAGATCCCAGG...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGCCTCCATGTTGCGGCTaGTCCATGTCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRPPCCG*SMSGPG
Trigger: GCCCGGCCCGGACATGGAGCAGCCGCAACATGGAGG...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGTAGCCCCCGACGGGTaGTGGTTCTGGCCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRVAPDG*WFWPAK
Trigger: CTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCTAC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGCCTGGAGCCCGGCCCTaGATGCCAAGGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRPGARP*MPRGYR
Trigger: GCGGTATCCCCTTGGCATGCAGGGCCGGGCTCCAGG...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCAGCGCTTGGCCAGTaGGTCCTGCCAGTGCGCGAT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKAALGQ*VLPVRD
Trigger: ATCGCGCACTGGCAGGACTCACTGGCCAAGCGCTGC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGCCTCGTCGCCCGGTTTaGTCAGCAGAGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKPRRPV*SAEAGP
Trigger: AGGGCCAGCCTCTGCTGAGCAAACCGGGCGACGAGG...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGGGGTCCTGAGCCTCTaGGGACGGGCACACCATCCA +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKGVLSL*GRAHHP
Trigger: TGGATGGTGTGCCCGTCCGCAGAGGCTCAGGACCCC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGCTCCCTCGTGCCGCTTaGCTGGAGGCCCGTACATGC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKLPRAA*LEARTC
Trigger: GCATGTACGGGCCTCCAGCCAAGCGGCACGAGGGAG...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGCCTGCCAGTGCGCGATaGTGCACAGCGGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKPASAR*CTAASR
Trigger: ACGAGACGCCGCTGTGCACCATCGCGCACTGGCAGG...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCCTTGCCCAAGCCCATaGCCGCGGCCGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLPCPSP*PRPPAG
Trigger: GCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGAGTGAGTCCTGCCAGTaGGCGATGGTGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRSESCQ*AMVHSG
Trigger: GCCGCTGTGCACCATCGCGCACTGGCAGGACTCACT...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGGCGGCTGCGGCTGCTaGAACTGGTTTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKGGCGC*NWFSCC
Trigger: GCAGCAGCTAAACCAGTTCCAGCAGCCGCAGCCGCC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGGGCTGCTCTGCTGTaGCTGGGAGTGGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKWAALL*LGVGVS
Trigger: ACTCACCCCCACTCCCAGCCACAGCAGAGCAGCCCA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGAGGTGGGATTCCGTGTaGCTGCATCTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKRWDSV*LHLAWA
Trigger: GGCCCAGGCCAGATGCAGCCACACGGAATCCCACCT...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGGTGCCCTGGAGATGTaGTTTGGCAGTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKGALEM*FGSDGG
Trigger: GCCGCCGTCACTGCCAAACCACATCTCCAGGGCACC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTCGAATCCCCGGTGCTaGAGACTTCAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRSNPRC*RLQVGA
Trigger: AGCCCCCACCTGAAGTCTTCAGCACCGGGGATTCGA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGCTTGCTGTCCGTACTaGGGTGGCATCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRACCPY*GGICCC
Trigger: GCAGCAGCAGATGCCACCGCAGTACGGACAGCAAGC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTGCTGTCCGTACTaGGGTGGCATCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKACCPY*GGICCC
Trigger: GCAGCAGCAGATGCCACCGCAGTACGGACAGCAAGC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGACGGCCCTCCAGGGATaGTGGAGAGGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKTALQG*WRGEVM
Trigger: CATCACCTCACCTCTCCAGCATCCCTGGAGGGCCGT...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCCGGCTCCCCCATCTTaGGCGGCGCGTCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLPAPPS*AARRPR
Trigger: ACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGGCTGGTACCTCTGCTaGGACTGCGCCGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGGWYLC*DCAAAG
Trigger: GCCGGCGGCGGCGCAGTCCCAGCAGAGGTACCAGCC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGCTTCTTGCCCACTGCTaGCAGACTGGACACCGGGGA +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRLLAHC*QTGHRG
Trigger: TCCCCGGTGTCCAGTCTGCCAGCAGTGGGCAAGAAG...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGCCCAGATTGGACATaGCCCCTGAGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKCPDWT*PLRGSG
Trigger: ACCAGAGCCCCTCAGGGGCCATGTCCAATCTGGGCA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCGACAGGACTGAGTTaGGCCCCACAGTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKATGLS*APQWER
Trigger: CCTTTCCCACTGTGGGGCCCAACTCAGTCCTGTCGC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGGGCTCATCGCCGGGTaGCTCCTTTGTTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWGLIAG*LLCCAA
Trigger: GGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR TCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGGCCACTGGCTCTCGTaGTTGATCCTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKGHWLS*LILCSG
Trigger: ACCTGAGCAGAGGATCAATCACGAGAGCCAGTGGCC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCTGCGGCGACAGGACTaGGTTGGGCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLRRQD*VGPHSG
Trigger: CCCACTGTGGGGCCCAACTCAGTCCTGTCGCCGCAG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGTGAGGCGACATGGATaGTCCTGTCTGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKVRRHG*SCLLRS
Trigger: GGACCTCAGCAGACAGGACCATCCATGTCGCCTCAC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGGTGGGCCCATTCCTaGCCCTCCCTGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKWWAHS*PSLLRH
Trigger: ATGTCTCAACAGGGAGGGCCAGGAATGGGCCCACCA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGAGAGGCTGGGGTTGGTaGCTTCAGGTCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKRGWGW*LQVTWN
Trigger: GTTCCAGGTGACCTGAAGCCACCAACCCCAGCCTCT...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGATGCCCATGCCCTGCTaGTATGGGGCGTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRMPMPC*YGAFGV
Trigger: GACTCCAAACGCCCCATACCAGCAGGGCATGGGCAT...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGATGCCCATGCCCTGCTaGTATGGGGCGTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKMPMPC*YGAFGV
Trigger: GACTCCAAACGCCCCATACCAGCAGGGCATGGGCAT...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGAAGGCTGGCGCTGGCTaGCGTGAGAAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWKAGAG*REKATG
Trigger: GCCAGTGGCCTTCTCACGTCAGCCAGCGCCAGCCTT...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGGGGACTGTGGGCATaGCCTTCTGCATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKWGLWA*PSASSW
Trigger: CCATGAAGATGCAGAAGGTCATGCCCACAGTCCCCA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCTGCTGATGGGGCGGTaGAGCGGGGGCCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSILLMGR*SGGLAN
Trigger: GTTGGCGAGGCCCCCGCTGCACCGCCCCATCAGCAG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCATCATGCCGCCGCCCTaGTGCCGCGGGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIIMPPP*CRGELS
Trigger: GCTGAGCTCCCCGCGGCAGCAGGGCGGCGGCATGAT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGGGCGCCTAGGTCCTTaGCCAAGCCCATGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIGRLGP*PSPCPR
Trigger: CCGCGGGCATGGGCTTGGGCAAGGACCTAGGCGCCC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGGCTGCCCTGGGATCTaGCCATGGTCGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIGCPGI*PWSVRG
Trigger: CCCCCGGACCGACCATGGGCAGATCCCAGGGCAGCC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCTACCTCTGCTGGGACTaGGCCGCCGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFYLCWD*AAAGCR
Trigger: CCTGCAGCCGGCGGCGGCGCAGTCCCAGCAGAGGTA...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTGGTTGTACATGTCCTaGATGCCGCTGTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRWLYMS*MPLLGT
Trigger: GGTGCCCAACAGCGGCATGCAGGACATGTACAACCA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTTCCAAAGGGAAACTTaGCGCTGTCGGTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKFQRET*RCRSGV
Trigger: GACCCCAGACCGACAGCGGCAAGTTTCCCTTTGGAA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCCAGTGCGCGATGGTaGACAGCGGCGTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWASARW*TAASRL
Trigger: GAGACGAGACGCCGCTGTGCACCATCGCGCACTGGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTCCAGCACAAGTCTCTaGGGCGACAGGACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKSSTSL*GDRTEL
Trigger: CAACTCAGTCCTGTCGCCGCAGAGACTTGTGCTGGA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGCCAACGTTCAGGTTaGTTGCCAGCTCACGCCACT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKCQRSG*LPAHAT
Trigger: AGTGGCGTGAGCTGGCAACCAACCTGAACGTTGGCA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCCAACAGGAGAAGGTaGCGGCCCTCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWANRRR*RPSRDA
Trigger: AGCATCCCTGGAGGGCCGTCACCTTCTCCTGTTGGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTTGCCTGCTTTGTGCTaGGTTTGCAGCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRLPALC*VCSSLH
Trigger: ATGCAGGCTGCTGCAAACTCAGCACAAAGCAGGCAA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCGGCGTCTGGTAGGATaGCTGAGGTGGGCGCGTGAT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLRRLVG*LRWARD
Trigger: ATCACGCGCCCACCTCAGTCATCCTACCAGACGCCG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGTGGGAAAGGGGTCCTaGGCCTCTGCGGACGGGCAC +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFVGKGS*ASADGH
Trigger: GTGCCCGTCCGCAGAGGCTCAGGACCCCTTTCCCAC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTCTGCGGCGACAGGACTaGGTTGGGCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERLRRQD*VGPHSG
Trigger: CCCACTGTGGGGCCCAACTCAGTCCTGTCGCCGCAG...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGAACTGGTTTAGCTGCTaGTGTAGTGCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRNWFSC*CSAWWW
Trigger: CCACCACCACGCACTACAGCAGCAGCTAAACCAGTT...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCTGCTGCCGCTGCCGCTaGTCCTCCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLCCRCR*SSCSSC
Trigger: GCAGGAGGAGCAGGAGGAGCAGCGGCAGCGGCAGCA...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGCGGGGCCCATCATCATaGCGCCGCCCTGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKRGPSS*RRPAAA
Trigger: CGCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCG...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTCTGTGGGCCGTACGTaGCACTTGAGTTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRSVGRT*HLSYSA
Trigger: AGCAGAGTAACTCAAGTGGCACGTACGGCCCACAGA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCCATTGTGGGCGTCATaGTGTAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLPLWAS*CRAGPG
Trigger: CCCAGGCCCAGCCCTACAGCATGACGCCCACAATGG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGGGTCCAGGGGCTTCTTaGCCACTGCTGGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLGPGAS*PLLADW
Trigger: CCAGTCTGCCAGCAGTGGGCAAGAAGCCCCTGGACC...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGCGGTGGCTTTTGGCCTaGTGGATTCCAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRRWLLA*WIPKGN
Trigger: GTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCACCG...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGTTCGACACACAGATaGAGCGCTTGGCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKCSTHR*SAWPVS
Trigger: ACTCACTGGCCAAGCGCTGCATCTGTGTGTCGAACA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACGGCTGGTACCTCTGCTaGGACTGCGCCGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYGWYLC*DCAAAG
Trigger: GCCGGCGGCGGCGCAGTCCCAGCAGAGGTACCAGCC...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGCTGGCCCCCAGGAGATaGGTGAGGCGACATGGATGG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWLAPRR*VRRHGW
Trigger: CCATCCATGTCGCCTCACCCATCTCCTGGGGGCCAG...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGCGCTGTAGCTTGCACTaGGTACCCCGCTATATGTTG +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRRCSLH*VPRYML
Trigger: CAACATATAGCGGGGTACCCAGTGCAAGCTACAGCG...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCTGCGGCAGCTTCCTaGGCCTTCCGGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWAAAAS*AFRFTV
Trigger: CACTGTGAACCGGAAGGCCCAGGAAGCTGCCGCAGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGGGCGTTTGGAGTCATaGAGTTCCGTTTTGGGTACG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKGRLES*SSVLGT
Trigger: CGTACCCAAAACGGAACTCCATGACTCCAAACGCCC...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCACGGTGGCTGTCCTGTaGGAGGGCCTTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGTVAVL*EGLGLG
Trigger: ACCCAGGCCAAGGCCCTCCCACAGGACAGCCACCGT...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGAGGTGGGATTCCGTGTaGCTGCATCTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLRWDSV*LHLAWA
Trigger: GGCCCAGGCCAGATGCAGCCACACGGAATCCCACCT...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGGAAGGAGGCGGGGCTaGGTGCCCTGGAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGGRRRG*VPWRCG
Trigger: ACCACATCTCCAGGGCACCCAGCCCCGCCTCCTTCC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTGTTCCGGTGGCTTTTaGCCTGCTGGATTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKCSGGF*PAGFQR
Trigger: CCTTTGGAATCCAGCAGGCCAAAAGCCACCGGAACA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGAGCCTGATGTTCCGGTaGCTTTTGGCCTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKSLMFR*LLACWI
Trigger: AATCCAGCAGGCCAAAAGCCACCGGAACATCAGGCT...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTCTCGTCTCGGCTCCTaGGCTCGTCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLSRLGS*ARLPGA
Trigger: GGCTCCTGGAAGACGAGCCCAGGAGCCGAGACGAGA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGGTTCTGCATCCCAGCTaGAGGCATTCGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLVLHPS*RHSSQG
Trigger: CCCCTGGGACGAATGCCTTCAGCTGGGATGCAGAAC...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTGGCGCTGGCTGACGTaGGAAGGCCACTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAWRWLT*EGHWLS
Trigger: CGAGAGCCAGTGGCCTTCTCACGTCAGCCAGCGCCA...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGCAGCGCTTGGCCAGTaGGTCCTGCCAGTGCGCGAT +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFAALGQ*VLPVRD
Trigger: ATCGCGCACTGGCAGGACTCACTGGCCAAGCGCTGC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGGGTATGGGCTGCTCTaGTGTGGCTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLGYGLL*CGWEWG
Trigger: CCCCCACTCCCAGCCACAGCAGAGCAGCCCATACCC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGGGTATGGGCTGCTCTaGTGTGGCTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERGYGLL*CGWEWG
Trigger: CCCCCACTCCCAGCCACAGCAGAGCAGCCCATACCC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCTCCTGGGTATGGGCTaGTCTGCTGTGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLLGMG*SAVAGS
Trigger: ACTCCCAGCCACAGCAGAGCAGCCCATACCCAGGAG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGAGCCCGGCCCTGCATaGCAAGGGGATACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETEREPGPA*QGDTAV
Trigger: CACAGCGGTATCCCCTTGGCATGCAGGGCCGGGCTC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTCTCCTGCTGCTGGCTaGCATACTGCATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKSPAAG*HTACCT
Trigger: TGTACAACATGCAGTATGGCAGCCAGCAGCAGGAGA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGGGATTCCGTGTGGCTaGATCTGGCCTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIGIPCG*IWPGPC
Trigger: GCAGGGCCCAGGCCAGATGCAGCCACACGGAATCCC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGGAGGCGGGGCTGGGTaGCCTGGAGATGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLGGGAG*PGDVVW
Trigger: CCAAACCACATCTCCAGGGCACCCAGCCCCGCCTCC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGAGGGATCTCCATCTTaGTCTCGAAGTGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPREGSPS*SRSESG
Trigger: TCCAGACTCACTTCGAGAGCAAGATGGAGATCCCTC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGGATCGGCAAGCAGATaGTCTCTGTGTAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRGSASR*SLCKQT
Trigger: TGTCTGCTTACACAGAGAGCATCTGCTTGCCGATCC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCAAGGGACAGGCAGGTTaGCTGGGGTTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGKGQAG*LGLEAG
Trigger: CCCAGCCTCCAACCCCAGGCAACCTGCCTGTCCCTT...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGACGGGTGCTGGTTCTaGCCGGCGAAGCGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIDGCWF*PAKRWK
Trigger: CTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCCTGGCCCCCAGGAGATaGGTGAGGCGACATGGATGG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGLAPRR*VRRHGW
Trigger: CCATCCATGTCGCCTCACCCATCTCCTGGGGGCCAG...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGCCCATACCGGGCCCTaGGCCGCTGTAGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIAHTGP*AAVACT
Trigger: AGTGCAAGCTACAGCGGCCCAGGGCCCGGTATGGGC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGGGCATAGCACCACATaGCTGGGCTGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGGHSTT*LGWPLS
Trigger: GGACAAGGGCCAGCCCAGCCATGTGGTGCTATGCCC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGCTGGTATGGGGCGTTTaGAGTCATGGAGTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKLVWGV*SHGVPF
Trigger: AAACGGAACTCCATGACTCCAAACGCCCCATACCAG...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCTCCCTCGTGCCGCTTaGCTGGAGGCCCGTACATGC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSILPRAA*LEARTC
Trigger: GCATGTACGGGCCTCCAGCCAAGCGGCACGAGGGAG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGGAAGGAGGCGGGGCTaGGTGCCCTGGAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERGRRRG*VPWRCG
Trigger: ACCACATCTCCAGGGCACCCAGCCCCGCCTCCTTCC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTCTGGGGTCCTGGGTTaGTGTCTTCAGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLSGVLG*CLQAEP
Trigger: GGGCTCTGCCTGAAGACACCAACCCAGGACCCCAGA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCGACAGGACTGAGTTaGGCCCCACAGTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWATGLS*APQWER
Trigger: CCTTTCCCACTGTGGGGCCCAACTCAGTCCTGTCGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCCATCATGGGGCTGGGTaGGGTGAGCAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGHHGAG*GEQLVE
Trigger: CTCAACCAGCTGCTCACCTCACCCAGCCCCATGATG...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR TCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCCAGGAGAACTGGGGGTaGCGCTGCTCATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGQENWG*RCSWFQ
Trigger: CTGGAACCATGAGCAGCGTCACCCCCAGTTCTCCTG...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGACTGAGGTGGGCGCGTaGTGGGCTGCATGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKTEVGA*WAAWRP
Trigger: CGGCCTCCATGCAGCCCATCACGCGCCCACCTCAGT...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTCGGCGTCTGGTAGGATaGCTGAGGTGGGCGCGTGAT +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERRRLVG*LRWARD
Trigger: ATCACGCGCCCACCTCAGTCATCCTACCAGACGCCG...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGTCATCTTTCTTCCCTaGACGGTGATCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRVIFLP*TVIKSL
Trigger: AAGGCTCTTGATCACCGTTCAGGGAAGAAAGATGAC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTATGCCGCCGCCCTGCTaGCGCGGGGAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIMPPPC*RGELST
Trigger: GGTGCTGAGCTCCCCGCGGCAGCAGGGCGGCGGCAT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGGAAATGGTCTGTTCTaGATCCCAGCTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRGNGLF*IPAEGI
Trigger: AATGCCTTCAGCTGGGATGCAGAACAGACCATTTCC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCAGGGCTGGGCCTGGGTaGTCATCAGGCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGRAGPG*SSGWSC
Trigger: ACAACTCCAGCCTGATGAGCACCCAGGCCCAGCCCT...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCGCCCGGGCCTTGCCTaGTCTGGTAGGGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIRPGLA*SGRDKA
Trigger: TGCCTTATCCCTACCAGAGCAGGCAAGGCCCGGGCG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCTGGCTCTGCTGGTACTaGGCCATCGTCACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIWLCWY*AIVTPS
Trigger: GGACGGGGTGACGATGGCGCAGTACCAGCAGAGCCA...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGACGGCTTTCAGTTTGTaGTTGGGGAGCAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWTAFSL*LGSSPV
Trigger: GACCGGGCTGCTCCCCAACCACAAACTGAAAGCCGT...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCCGCGACACTGTCCTTaGCGCCTCCATGTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFPRHCP*RLHVAA
Trigger: AGCCGCAACATGGAGGCGCCAAGGACAGTGTCGCGG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGCCCCCGACGGGTGCTaGTTCTGGCCGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIAPDGC*FWPAKR
Trigger: GCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGGTGAGGTGAGCAGCTaGTTGAGGGTCGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGGEVSS*LRVGVA
Trigger: GGCTACACCGACCCTCAACCAGCTGCTCACCTCACC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTGGGCTGCTCTGCTGTaGCTGGGAGTGGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAWAALL*LGVGVS
Trigger: ACTCACCCCCACTCCCAGCCACAGCAGAGCAGCCCA...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCCCTCCAGGGATGCTaGAGAGGTGAGGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWALQGC*RGEVMH
Trigger: ATGCATCACCTCACCTCTCCAGCATCCCTGGAGGGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGGGCATAGCACCACATaGCTGGGCTGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAGHSTT*LGWPLS
Trigger: GGACAAGGGCCAGCCCAGCCATGTGGTGCTATGCCC...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCACAGTGGGCATTGGTaGGCCCATTCCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIHSGHW*AHSWPS
Trigger: GGAGGGCCAGGAATGGGCCCACCAATGCCCACTGTG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGCTGCGGCAGCTTCCTaGGCCTTCCGGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAAAAAS*AFRFTV
Trigger: CACTGTGAACCGGAAGGCCCAGGAAGCTGCCGCAGC...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGAGGCACAGACAATTTaGACTCACTGGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPREAQTI*THWETS
Trigger: TGATGTCTCCCAGTGAGTCCAAATTGTCTGTGCCTC...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGAGAGGCTGGGGTTGGTaGCTTCAGGTCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWRGWGW*LQVTWN
Trigger: GTTCCAGGTGACCTGAAGCCACCAACCCCAGCCTCT...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTTCTTCCGCTTTGCATaGGAGTCATCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRFFRFA*ESSVHE
Trigger: CTCATGGACAGATGACTCCCATGCAAAGCGGAAGAA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCCCTGCCCATCATGTCTaGCATGCCCATGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGPAHHV*HAHALL
Trigger: CAGCAGGGCATGGGCATGCCAGACATGATGGGCAGG...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGCCCAGATTGGACATaGCCCCTGAGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGCPDWT*PLRGSG
Trigger: ACCAGAGCCCCTCAGGGGCCATGTCCAATCTGGGCA...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGTGTCCTCCATACGGTaGCTGTCCTGTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERVSSIR*LSCGRA
Trigger: GGCCCTCCCACAGGACAGCCACCGTATGGAGGACAC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGCAAGAGCCTTTTGGCTaGGGTCACCCACTTCATATT +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKQEPFG*GHPLHI
Trigger: AATATGAAGTGGGTGACCCCAGCCAAAAGGCTCTTG...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGTCATCTTCCAGGGACTaGCTGTCATCTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SRSRIWVNGGRAGTRLPRSSSRD*LSSFFP
Trigger: AGGGAAGAAAGATGACAGCCAGTCCCTGGAAGATGA...CCTAGGAAGCCTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGCTTACTGGCCTGCTTTaGCGTCTCCTTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWLTGLL*RLLGVH
Trigger: GTGGACCCCAAGGAGACGCCAAAGCAGGCCAGTAAG...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTTTCAGGCAGAGCCCCTaGCCGGGCAGACAAGACGTC +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERFRQSP*PGRQDV
Trigger: GACGTCTTGTCTGCCCGGCCAGGGGCTCTGCCTGAA...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCTCTCGTCTCGGCTCCTaGGCTCGTCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSISRLGS*ARLPGA
Trigger: GGCTCCTGGAAGACGAGCCCAGGAGCCGAGACGAGA...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCACAGATGCAGCGCTTaGCCAGTGAGTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLHRCSA*PVSPAS
Trigger: ACTGGCAGGACTCACTGGCCAAGCGCTGCATCTGTG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCTTCTCATAGGTCTGTaGCGCCCGCTTTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLLIGL*RPLSLR
Trigger: CCGGAGAGAAAGCGGGCGCCACAGACCTATGAGAAG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTGTTGTCCGCCATGTTaGTCAAAGCAAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWCCPPC*SKQGPA
Trigger: CGCTGGGCCTTGCTTTGATCAACATGGCGGACAACA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGACGGGTCATGCACACTaGCTGTACTGCTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLTGHAH*LYCFFR
Trigger: GCGGAAGAAGCAGTACAGTCAGTGTGCATGACCCGT...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGGCCACTGGCTCTCGTaGTTGATCCTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGGHWLS*LILCSG
Trigger: ACCTGAGCAGAGGATCAATCACGAGAGCCAGTGGCC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTGGGGACTGTGGGCATaGCCTTCTGCATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLWGLWA*PSASSW
Trigger: CCATGAAGATGCAGAAGGTCATGCCCACAGTCCCCA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTGGCGCCTCCATGTTaGGGCTGCTCCATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTLAPPC*GCSMSG
Trigger: CCCGGACATGGAGCAGCCGCAACATGGAGGCGCCAA...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTCTCCTGGGTATGGGCTaGTCTGCTGTGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWALLGMG*SAVAGS
Trigger: ACTCCCAGCCACAGCAGAGCAGCCCATACCCAGGAG...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCAAGGGGATACCGCTGTaGACCTGGGGGACCGTAGGA +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLKGIPL*TWGTVG
Trigger: TCCTACGGTCCCCCAGGTGCACAGCGGTATCCCCTT...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTAAGGGGATACCGCTGTaGACCTGGGGGACCGTAGGA +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAKGIPL*TWGTVG
Trigger: TCCTACGGTCCCCCAGGTGCACAGCGGTATCCCCTT...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACGAGCCCGGCCCTGCATaGCAAGGGGATACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYEPGPA*QGDTAV
Trigger: CACAGCGGTATCCCCTTGGCATGCAGGGCCGGGCTC...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCACGGCCCTCCAGGGATaGTGGAGAGGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFTALQG*WRGEVM
Trigger: CATCACCTCACCTCTCCAGCATCCCTGGAGGGCCGT...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTAGGGCTGGGCCTGGGTaGTCATCAGGCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWARAGPG*SSGWSC
Trigger: ACAACTCCAGCCTGATGAGCACCCAGGCCCAGCCCT...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGGCATGCCCATGCCCTaGTGGTATGGGGCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLGMPMP*WYGAFG
Trigger: TCCAAACGCCCCATACCAGCAGGGCATGGGCATGCC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTACATGTCTCCCTCGTaGCGCTTGGCTGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTYMSPS*RLAGGP
Trigger: CGGGCCTCCAGCCAAGCGGCACGAGGGAGACATGTA...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGACTTGCTTGGAGACATaGGACTCTCCAGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWTCLET*DSPGSA
Trigger: AGCGCTCCCTGGAGAGTCGCATGTCTCCAAGCAAGT...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTTGTCCAGAGCCCACGTaGTCTCAGCCAACAGACCCG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERCPEPT*SQPTDP
Trigger: CGGGTCTGTTGGCTGAGAGCACGTGGGCTCTGGACA...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCTTGGCCAGTGAGTCCTaGCAGTGCGCGATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLLASES*QCAMVH
Trigger: GTGCACCATCGCGCACTGGCAGGACTCACTGGCCAA...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGGGTGGGGGCTGCATGTaGATAAGGTTATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLGGGCM*IRLCWL
Trigger: GAGCCAGCATAACCTTATGCACATGCAGCCCCCACC...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCGCCCAGGCTGTTGTTaGCAGTGGGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFRPGCC*QWDAAA
Trigger: AGCAGCAGCATCCCACTGCCAACAACAGCCTGGGCG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCCTGGGATCTGCCCATaGTCGGTCCGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIPGICP*SVRGCR
Trigger: CCGGCACCCCCGGACCGACCATGGGCAGATCCCAGG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTCTCTTCATCACCATTaGGTCCATCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWSLHHH*VHRAAL
Trigger: CAGGGCAGCCCGATGGACCCAATGGTGATGAAGAGA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTGGGGAGGTCATCGATaGAGCCAGACAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWWGGHR*SQTGLV
Trigger: TACCAGACCTGTCTGGCTCCATCGATGACCTCCCCA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGTTCACAGTGGGCATTaGTGGGCCCATTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLVHSGH*WAHSWP
Trigger: GGGCCAGGAATGGGCCCACCAATGCCCACTGTGAAC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCCCTTCCGGTTCACAGTaGGCATTGGTGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGPSGSQ*ALVGPF
Trigger: GAATGGGCCCACCAATGCCCACTGTGAACCGGAAGG...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGGTAGAGGCTGGGGTTaGTGGCTTCAGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLGRGWG*WLQVTW
Trigger: CCAGGTGACCTGAAGCCACCAACCCCAGCCTCTACC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCCCTGCCCATCATGTCTaGCATGCCCATGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLPAHHV*HAHALL
Trigger: CAGCAGGGCATGGGCATGCCAGACATGATGGGCAGG...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACCCTGTGGGAGGGCCTTaGCCTGGGTACTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYPVGGP*PGYCCP
Trigger: CGGACAGCAGTACCCAGGCCAAGGCCCTCCCACAGG...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTGTGTCCTCCATACGGTaGCTGTCCTGTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTVSSIR*LSCGRA
Trigger: GGCCCTCCCACAGGACAGCCACCGTATGGAGGACAC...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTCCGTGTGGCTGCATCTaGCCTGGGCCCTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTPCGCI*PGPCIL
Trigger: AAGGATGCAGGGCCCAGGCCAGATGCAGCCACACGG...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGCTTTGGCGTCTCCTTaGGGTCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFALASP*GPRRHL
Trigger: CAGATGCCTCCGTGGACCCCAAGGAGACGCCAAAGC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCTCTGGGGTCCTGGGTTaGTGTCTTCAGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFSGVLG*CLQAEP
Trigger: GGGCTCTGCCTGAAGACACCAACCCAGGACCCCAGA...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGTCGGTCTGGGGTCCTaGGTTGGTGTCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERVGLGS*VGVFRQ
Trigger: CTGCCTGAAGACACCAACCCAGGACCCCAGACCGAC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCAGTTGGGCCCCACAGTaGGAAAGGGGTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSISWAPQ*ERGPEP
Trigger: AGGCTCAGGACCCCTTTCCCACTGTGGGGCCCAACT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTCGATAAAAGCGCCATaGACATTTCTCGACAGACTG +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKSIKAP*TFLDRL
Trigger: CAGTCTGTCGAGAAATGTCCATGGCGCTTTTATCGA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGGCCAGTGTGTCCCCCTaGGCAAGGTTCGATAAAAGC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLASVSP*ARFDKS
Trigger: GCTTTTATCGAACCTTGCCCAGGGGGACACACTGGC...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTTATGCTGGCTCTGCTaGTACTGCGCCATCGTCACC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLCWLC*YCAIVT
Trigger: GGTGACGATGGCGCAGTACCAGCAGAGCCAGCATAA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTGGCCAGCAGAGCTTTaGCCGCCCGGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAWPAEL*PPGTSC
Trigger: ACATGATGTGCCGGGCGGCCAAAGCTCTGCTGGCCA...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCGACAGGCAGGTTGCCTaGGGTTGGAGGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGDRQVA*GWRLGN
Trigger: ATTTCCCAGCCTCCAACCCCAGGCAACCTGCCTGTC...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACGCCAACAGGAGAAGGTaGCGGCCCTCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYANRRR*RPSRDA
Trigger: AGCATCCCTGGAGGGCCGTCACCTTCTCCTGTTGGC...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTCTGGTTGTTGGCATTaGTGCCCATACCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWASGCWH*CPYRAL
Trigger: CAGGGCCCGGTATGGGCATCAATGCCAACAACCAGA...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCGAATTGCTCCCAGTTaGCTGTGGAGTCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIRIAPS*LWSLWA
Trigger: GGCCCACAGACTCCACAGTCAACTGGGAGCAATTCG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTACTGAGGTGGGCGCGTaGTGGGCTGCATGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIITEVGA*WAAWRP
Trigger: CGGCCTCCATGCAGCCCATCACGCGCCCACCTCAGT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTGATGTGGTTTGGCAGTaGCGGCGGCGTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTDVVWQ*RRRLVG
Trigger: TCCTACCAGACGCCGCCGTCACTGCCAAACCACATC...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGTGGGAAAGGGGTCCTaGGCCTCTGCGGACGGGCAC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIVGKGS*ASADGH
Trigger: GTGCCCGTCCGCAGAGGCTCAGGACCCCTTTCCCAC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCAGTGGGATGCTGCTaGTGCGGCGGTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAVGCC*CGGGGG
Trigger: GCCGCCGCCACCGCCGCAGCAGCAGCATCCCACTGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATGCCGCCGCCCTGCTaGCGCGGGGAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHMPPPC*RGELST
Trigger: GGTGCTGAGCTCCCCGCGGCAGCAGGGCGGCGGCAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGGGGCCCATCATCATaGCGCCGCCCTGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRGPSS*RRPAAA
Trigger: CGCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGGCTGCCCTGGGATCTaGCCATGGTCGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVGCPGI*PWSVRG
Trigger: CCCCCGGACCGACCATGGGCAGATCCCAGGGCAGCC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGACCTGGAGCCCGGCCCTaGATGCCAAGGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRPGARP*MPRGYR
Trigger: GCGGTATCCCCTTGGCATGCAGGGCCGGGCTCCAGG...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTAGCCTGCATCACAGCTaGGGCAGCTTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTSLHHS*GSFLGL
Trigger: AAGGCCCAGGAAGCTGCCGCAGCTGTGATGCAGGCT...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGGTCCAGGGGCTTCTTaGCCACTGCTGGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKGPGAS*PLLADW
Trigger: CCAGTCTGCCAGCAGTGGGCAAGAAGCCCCTGGACC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGTTCATAGGGCATCCTaGCCATCATGTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWVHRAS*PSCLAC
Trigger: GCATGCCAGACATGATGGGCAGGATGCCCTATGAAC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGGTTGTACATGTCCTaGATGCCGCTGTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGWLYMS*MPLLGT
Trigger: GGTGCCCAACAGCGGCATGCAGGACATGTACAACCA...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCAGGAAGGGAGACTTaGTTGGAGACATGCGACTCT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWAGRET*LETCDS
Trigger: AGAGTCGCATGTCTCCAAGCAAGTCTCCCTTCCTGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTGTCCAGAGCCCACGTaGTCTCAGCCAACAGACCCG +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTCPEPT*SQPTDP
Trigger: CGGGTCTGTTGGCTGAGAGCACGTGGGCTCTGGACA...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGCTAGGGCAGGGCTaGTCTTCCCCTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIQLGQG*SSPLTL
Trigger: TAGAGTCAGAGGGGAAGAGCAGCCCTGCCCTAGCTG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCAGACAAGTCTAGCTaGCCGGAAATGTTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWADKSS*PEMFAN
Trigger: GTTGGCGAACATTTCCGGGCAGCTAGACTTGTCTGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCCAATGCTTCCTTTCTaGACAGCTATTGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLPMLPF*TAIALA
Trigger: GGCGAGGGCAATAGCTGTGCAGAAAGGAAGCATTGG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACAAGGGACAGGCAGGTTaGCTGGGGTTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYKGQAG*LGLEAG
Trigger: CCCAGCCTCCAACCCCAGGCAACCTGCCTGTCCCTT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCCCCGACGGGTGCTaGTTCTGGCCGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAPDGC*FWPAKR
Trigger: GCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCATGTCCTGCTGTGGCTaGTACCTCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIMSCCG*YLCWDC
Trigger: GCAGTCCCAGCAGAGGTACCAGCCACAGCAGGACAT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTGCTTCTGTTCCCGTaGGGAGGTCATCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGLLLFP*GGHRWS
Trigger: GCTCCATCGATGACCTCCCCACGGGAACAGAAGCAA...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCCTTGGGGTCCATACTaGCTCATCTGTGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIPWGPY*LICGPY
Trigger: GTACGGCCCACAGATGAGCCAGTATGGACCCCAAGG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTCCTTGGGGTCCATACTaGCTCATCTGTGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAPWGPY*LICGPY
Trigger: GTACGGCCCACAGATGAGCCAGTATGGACCCCAAGG...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTACCACATGGCTGGGCTaGCCCTTGTCCATGCATCTG +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWATTWLG*PLSMHL
Trigger: CAGATGCATGGACAAGGGCCAGCCCAGCCATGTGGT...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCCCTTCCGGTTCACAGTaGGCATTGGTGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLPSGSQ*ALVGPF
Trigger: GAATGGGCCCACCAATGCCCACTGTGAACCGGAAGG...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCAGCTGGCTGCGCTGCTaGAAGTGCCAACGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSISWLRC*KCQRSG
Trigger: ACCTGAACGTTGGCACTTCCAGCAGCGCAGCCAGCT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTGGTAGAGGCTGGGGTTaGTGGCTTCAGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTGRGWG*WLQVTW
Trigger: CCAGGTGACCTGAAGCCACCAACCCCAGCCTCTACC...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCCTGCATGCCGCTGTTaGGCACCTGTCCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFPACRC*APVLVS
Trigger: TGACACAAGGACAGGTGCCCAACAGCGGCATGCAGG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGGGTACAGGCCAGGCTaGTGTCCTCCATACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKGYRPG*CPPYGG
Trigger: GCCACCGTATGGAGGACACCAGCCTGGCCTGTACCC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCCTTACTGGCCTGCTTTaGCGTCTCCTTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLLTGLL*RLLGVH
Trigger: GTGGACCCCAAGGAGACGCCAAAGCAGGCCAGTAAG...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCACAGATGCAGCGCTTaGCCAGTGAGTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIHRCSA*PVSPAS
Trigger: ACTGGCAGGACTCACTGGCCAAGCGCTGCATCTGTG...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGCTCCTGACGACTAAATaGAGGCGTGGCCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWLLTTK*RRGQDQ
Trigger: CTGATCTTGGCCACGCCTCCATTTAGTCGTCAGGAG...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGACAGGCAGGTTGCCTaGGGTTGGAGGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWADRQVA*GWRLGN
Trigger: ATTTCCCAGCCTCCAACCCCAGGCAACCTGCCTGTC...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 72 bp CAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTaGTCTATCCAGTCTCCACATCCTTGTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QRTQHNPARSKG*SIQSPHPCGLS
Trigger: GCTCAGCCCACAAGGATGTGGAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGCTTCCACCCTCCTTaGGAGCCGCCTCGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRFHPP*EPPRSG
Trigger: GCCGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAGCG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092723.11
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGTGGTGGTGCTGCTaGTGGGGCGGTGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWWWCC*WGGAAG
Trigger: CCCCGCTGCACCGCCCCATCAGCAGCACCACCACCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTCTGCTGAAAGTTACTaGTCCCAGGATGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWSAESY*SQDASG
Trigger: GCCAGATGCATCCTGGGATCAGTAACTTTCAGCAGA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACCCTGGCCCTCCCTGTTaGGACATGCCAGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYPGPPC*DMPGEL
Trigger: CAGTTCTCCTGGCATGTCTCAACAGGGAGGGCCAGG...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGATGTGGTTTGGCAGTaGCGGCGGCGTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKDVVWQ*RRRLVG
Trigger: TCCTACCAGACGCCGCCGTCACTGCCAAACCACATC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGCCATAGCTGTCCTTTaGCTTGCTCTCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIAIAVL*LALRLG
Trigger: TCCCAGCCTGAGAGCAAGTCAAAGGACAGCTATGGC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTGCTGATGGGGCGGTaGAGCGGGGGCCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLLMGR*SGGLAN
Trigger: GTTGGCGAGGCCCCCGCTGCACCGCCCCATCAGCAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCAGTGGGATGCTGCTaGTGCGGCGGTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAVGCC*CGGGGG
Trigger: GCCGCCGCCACCGCCGCAGCAGCAGCATCCCACTGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCACAGCTCCGGCTCCTaGTGCCGCTGCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHHSSGS*CRCRCS
Trigger: GGAGCAGCGGCAGCGGCAGCAGGAGCCGGAGCTGTG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATGCCGCCGCCCTGCTaGCGCGGGGAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIMPPPC*RGELST
Trigger: GGTGCTGAGCTCCCCGCGGCAGCAGGGCGGCGGCAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATCATGCCGCCGCCCTaGTGCCGCGGGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHIMPPP*CRGELS
Trigger: GCTGAGCTCCCCGCGGCAGCAGGGCGGCGGCATGAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGGGGCCCATCATCATaGCGCCGCCCTGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRGPSS*RRPAAA
Trigger: CGCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTTGCCCAAGCCCATaGCCGCGGCCGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPCPSP*PRPPAG
Trigger: GCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGCGCCTAGGTCCTTaGCCAAGCCCATGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGRLGP*PSPCPR
Trigger: CCGCGGGCATGGGCTTGGGCAAGGACCTAGGCGCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGTCGGTCCGGGGGTaGCGGGGCTCATCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWSVRG*RGSSPG
Trigger: ACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGCTGCCCTGGGATCTaGCCATGGTCGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGCPGI*PWSVRG
Trigger: CCCCCGGACCGACCATGGGCAGATCCCAGGGCAGCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTACCTCTGCTGGGACTaGGCCGCCGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHYLCWD*AAAGCR
Trigger: CCTGCAGCCGGCGGCGGCGCAGTCCCAGCAGAGGTA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGAGCCTGCATCACAGCTaGGGCAGCTTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKSLHHS*GSFLGL
Trigger: AAGGCCCAGGAAGCTGCCGCAGCTGTGATGCAGGCT...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCTGTACATGTCCTGCATaGCGCTGTTGGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLCTCPA*RCWAPV
Trigger: GACAGGTGCCCAACAGCGGCATGCAGGACATGTACA...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCTGGAGGCCCGTACATaGCATCCATATGACGTTTGT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLEART*HPYDVC
Trigger: ACAAACGTCATATGGATGGCATGTACGGGCCTCCAG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGGAGGCGGGGCTGGGTaGCCTGGAGATGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIGGGAG*PGDVVW
Trigger: CCAAACCACATCTCCAGGGCACCCAGCCCCGCCTCC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGTGGGCATGACCTTCTaGATCTTCATGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFVGMTF*IFMVGR
Trigger: CCTGCCCACCATGAAGATGCAGAAGGTCATGCCCAC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCTTCCAAAGGGAAACTTaGCGCTGTCGGTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLFQRET*RCRSGV
Trigger: GACCCCAGACCGACAGCGGCAAGTTTCCCTTTGGAA...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGTTCGACACACAGATaGAGCGCTTGGCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGCSTHR*SAWPVS
Trigger: ACTCACTGGCCAAGCGCTGCATCTGTGTGTCGAACA...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTACCACTCATCTTTGCTaGAGGCCACCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWATTHLC*RPPPCP
Trigger: AGGACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGT...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCCCCGACGGGTGCTaGTTCTGGCCGGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAPDGC*FWPAKR
Trigger: GCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGCTGGTACCTCTGCTaGGACTGCGCCGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGWYLC*DCAAAG
Trigger: GCCGGCGGCGGCGCAGTCCCAGCAGAGGTACCAGCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGCCACCAGGCCACTCTaGTTCATGCCAGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERATRPL*FMPGKL
Trigger: CAGTTTTCCTGGCATGAACCAGAGTGGCCTGGTGGC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGCTTTTTCAGAGAGCTaGCTGCGCTGCTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFAFSES*LRCWKC
Trigger: GCACTTCCAGCAGCGCAGCCAGCTCTCTGAAAAAGC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTGGCTTCAGGTCACCTaGAACCTCTGCCATCGAATT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLWLQVT*NLCHRI
Trigger: AATTCGATGGCAGAGGTTCCAGGTGACCTGAAGCCA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGCTGGTATGGGGCGTTTaGAGTCATGGAGTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWLVWGV*SHGVPF
Trigger: AAACGGAACTCCATGACTCCAAACGCCCCATACCAG...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTCATGCCCTGCTGGTATaGGGCGTTTGGAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAHALLV*GVWSHG
Trigger: TCCATGACTCCAAACGCCCCATACCAGCAGGGCATG...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGACCTGTGGGAGGGCCTTaGCCTGGGTACTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRPVGGP*PGYCCP
Trigger: CGGACAGCAGTACCCAGGCCAAGGCCCTCCCACAGG...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGCTGAGGCCCCTCGCTaGAGGATGACTGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIAEAPR*RMTAWG
Trigger: GCCCCATGCAGTCATCCTCCAGCGAGGGGCCTCAGC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCAGCCTGATGTTCCGGTaGCTTTTGGCCTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGSLMFR*LLACWI
Trigger: AATCCAGCAGGCCAAAAGCCACCGGAACATCAGGCT...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGTGGTGGTGCTGCTaGTGGGGCGGTGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWWWCC*WGGAAG
Trigger: CCCCGCTGCACCGCCCCATCAGCAGCACCACCACCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGCTCATCGCCGGGTaGCTCCTTTGTTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGLIAG*LLCCAA
Trigger: GGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCTTGCCTGCTTTGTGCTaGGTTTGCAGCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFLPALC*VCSSLH
Trigger: ATGCAGGCTGCTGCAAACTCAGCACAAAGCAGGCAA...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTACGGGTCATGCACACTaGCTGTACTGCTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTTGHAH*LYCFFR
Trigger: GCGGAAGAAGCAGTACAGTCAGTGTGCATGACCCGT...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAAAGGCTGGCGCTGGCTaGCGTGAGAAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVKAGAG*REKATG
Trigger: GCCAGTGGCCTTCTCACGTCAGCCAGCGCCAGCCTT...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGGTCATCTTTCTTCCCTaGACGGTGATCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLVIFLP*TVIKSL
Trigger: AAGGCTCTTGATCACCGTTCAGGGAAGAAAGATGAC...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGTGGGAAAGGGGTCCTaGGCCTCTGCGGACGGGCAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHVGKGS*ASADGH
Trigger: GTGCCCGTCCGCAGAGGCTCAGGACCCCTTTCCCAC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTGCGGCGACAGGACTaGGTTGGGCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLRRQD*VGPHSG
Trigger: CCCACTGTGGGGCCCAACTCAGTCCTGTCGCCGCAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTGCTGATGGGGCGGTaGAGCGGGGGCCTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILLMGR*SGGLAN
Trigger: GTTGGCGAGGCCCCCGCTGCACCGCCCCATCAGCAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGTGCTCATAGCGGCTaGCCGCCGGCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGAHSG*PPAPPS
Trigger: AGATGGGGGAGCCGGCGGGCAGCCGCTATGAGCACC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGCTGCCGCTGCCGCTaGTCCTCCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCCRCR*SSCSSC
Trigger: GCAGGAGGAGCAGGAGGAGCAGCGGCAGCGGCAGCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCACAGCTCCGGCTCCTaGTGCCGCTGCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIHSSGS*CRCRCS
Trigger: GGAGCAGCGGCAGCGGCAGCAGGAGCCGGAGCTGTG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATCATGCCGCCGCCCTaGTGCCGCGGGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIIMPPP*CRGELS
Trigger: GCTGAGCTCCCCGCGGCAGCAGGGCGGCGGCATGAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGCGCCTAGGTCCTTaGCCAAGCCCATGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGRLGP*PSPCPR
Trigger: CCGCGGGCATGGGCTTGGGCAAGGACCTAGGCGCCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTGGAGCCCGGCCCTaGATGCCAAGGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPGARP*MPRGYR
Trigger: GCGGTATCCCCTTGGCATGCAGGGCCGGGCTCCAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTACCTCTGCTGGGACTaGGCCGCCGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIYLCWD*AAAGCR
Trigger: CCTGCAGCCGGCGGCGGCGCAGTCCCAGCAGAGGTA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCGCTGGCCCTTGTCCATaGATCTGGTTGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLAGPCP*IWLLAL
Trigger: CAATGCCAACAACCAGATGCATGGACAAGGGCCAGC...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGTCACCTGGAACCTCTaGCATCGAATTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERVTWNL*HRIAPS
Trigger: ACTGGGAGCAATTCGATGGCAGAGGTTCCAGGTGAC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCGCCCGGGCCTTGCCTaGTCTGGTAGGGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIRPGLA*SGRDKA
Trigger: TGCCTTATCCCTACCAGAGCAGGCAAGGCCCGGGCG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTAGTGAGTCCTGCCAGTaGGCGATGGTGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIISESCQ*AMVHSG
Trigger: GCCGCTGTGCACCATCGCGCACTGGCAGGACTCACT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTCGTGGGCTTCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGTTATCAAGTTACCAATaGTTCCTTTCTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: FVGFQESDLGEWREGRHKLSSYQ*FLSAQL
Trigger: TAGCTGTGCAGAAAGGAAGCATTGGTAACTTGATAA...CTTGTGCCTGCCCTCCCTCCATTCACCCAGATCCGACTCCTGGAAGCCCACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCTGCGGCTGCTGGAACTaGTTTAGCTGCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLCGCWN*FSCCCS
Trigger: ACTACAGCAGCAGCTAAACCAGTTCCAGCAGCCGCA...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCGGCTCCCCCATCTTaGGCGGCGCGTCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPAPPS*AARRPR
Trigger: ACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTGGGATCTGCCCATaGTCGGTCCGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPGICP*SVRGCR
Trigger: CCGGCACCCCCGGACCGACCATGGGCAGATCCCAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATCCATCGGGCTGCCCTaGGATCTGCCCATGGTCGGT +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRSIGLP*DLPMVG
Trigger: ACCGACCATGGGCAGATCCCAGGGCAGCCCGATGGA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTTCCATCGGGCTGCCCTaGGATCTGCCCATGGTCGGT +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIISIGLP*DLPMVG
Trigger: ACCGACCATGGGCAGATCCCAGGGCAGCCCGATGGA...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTCTCTTCATCACCATTaGGTCCATCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTSLHHH*VHRAAL
Trigger: CAGGGCAGCCCGATGGACCCAATGGTGATGAAGAGA...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACATGTCCTGCTGTGGCTaGTACCTCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYMSCCG*YLCWDC
Trigger: GCAGTCCCAGCAGAGGTACCAGCCACAGCAGGACAT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCTGTGGCATTGGTGACTaGCTCAAGGCAGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSICGIGD*LKAGWE
Trigger: TTCCCATCCTGCCTTGAGCCAGTCACCAATGCCACA...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTCGCTGTAGCTTGCACTaGGTACCCCGCTATATGTTG +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERRCSLH*VPRYML
Trigger: CAACATATAGCGGGGTACCCAGTGCAAGCTACAGCG...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGATAGCACCACATGGCTaGGCTGGCCCTTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKIAPHG*AGPCPC
Trigger: GCATGGACAAGGGCCAGCCCAGCCATGTGGTGCTAT...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCACAGTGGGCATTGGTaGGCCCATTCCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIHSGHW*AHSWPS
Trigger: GGAGGGCCAGGAATGGGCCCACCAATGCCCACTGTG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTAGCTGTTCACCATTGTaGGCGTCATGCTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWASCSPL*ASCCRA
Trigger: AGCCCTACAGCATGACGCCCACAATGGTGAACAGCT...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACAGCTGGCTGCGCTGCTaGAAGTGCCAACGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYSWLRC*KCQRSG
Trigger: ACCTGAACGTTGGCACTTCCAGCAGCGCAGCCAGCT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGCCTGCATGCCGCTGTTaGGCACCTGTCCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKPACRC*APVLVS
Trigger: TGACACAAGGACAGGTGCCCAACAGCGGCATGCAGG...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGGCCTTCGGTCATAACTaGTTCCATAGGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWAFGHN*FHRETA
Trigger: AGCAGTTTCCCTATGGAACCAGTTATGACCGAAGGC...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTACATCTCCTGCTGCTaGCTGCCATACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGYISCC*LPYCML
Trigger: CAACATGCAGTATGGCAGCCAGCAGCAGGAGATGTA...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGAAGGGAGACTTGCTTaGAGACATGCGACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIEGRLA*RHATLQ
Trigger: CTGGAGAGTCGCATGTCTCCAAGCAAGTCTCCCTTC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTCATCTTCCAGGGACTaGCTGTCATCTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWSSSRD*LSSFFP
Trigger: AGGGAAGAAAGATGACAGCCAGTCCCTGGAAGATGA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTCTTTCTTCTTACCCGTaGAGCTTAGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWALSSYP*SLEAEV
Trigger: CACCTCCGCCTCTAAGCTCCACGGGTAAGAAGAAAG...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTGGCTTTTGGCCTGCTaGATTCCAAAGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWWLLAC*IPKGNL
Trigger: CAAGTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCTGTTCCGGTGGCTTTTaGCCTGCTGGATTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSICSGGF*PAGFQR
Trigger: CCTTTGGAATCCAGCAGGCCAAAAGCCACCGGAACA...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGAAAGGAGGAGATGCTaGCAGAGCTGGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIERRRC*QSWETL
Trigger: CAATGTCTCCCAGCTCTGCCAGCATCTCCTCCTTTC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 72 bp GATATCCGGCAACCTGTTTCTCTATTCCCGAGGCCTTaGGTTCCCCAGAAAATACTGTGGCAGAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: DIRQPVSLFPRP*VPQKILWQKPE
Trigger: CTCTGGCTTCTGCCACAGTATTTTCTGGGGAACCAAAGGCCTCGGGAATAGAGAAACAGGTTGCCGGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCGCCGTACGTGCCACTTaGGTTACTCTGCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFAVRAT*VTLLKV
Trigger: AACTTTCAGCAGAGTAACTCAAGTGGCACGTACGGC...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGCTTTTCTCATTCCACTaGAAGGGTCCTTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLFSFH*KGPCWV
Trigger: AACCCAACAAGGACCCTTTCAGTGGAATGAGAAAAG...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGCGCTGGCTGACGTaGGAAGGCCACTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWRWLT*EGHWLS
Trigger: CGAGAGCCAGTGGCCTTCTCACGTCAGCCAGCGCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAAGGCTGGCGCTGGCTaGCGTGAGAAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHKAGAG*REKATG
Trigger: GCCAGTGGCCTTCTCACGTCAGCCAGCGCCAGCCTT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACTGAGGTGGGCGCGTaGTGGGCTGCATGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITEVGA*WAAWRP
Trigger: CGGCCTCCATGCAGCCCATCACGCGCCCACCTCAGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTGGGAAAGGGGTCCTaGGCCTCTGCGGACGGGCAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVGKGS*ASADGH
Trigger: GTGCCCGTCCGCAGAGGCTCAGGACCCCTTTCCCAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTGCGGCGACAGGACTaGGTTGGGCCCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILRRQD*VGPHSG
Trigger: CCCACTGTGGGGCCCAACTCAGTCCTGTCGCCGCAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTCCATGTTGCGGCTaGTCCATGTCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPPCCG*SMSGPG
Trigger: GCCCGGCCCGGACATGGAGCAGCCGCAACATGGAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTCGTCGCCCGGTTTaGTCAGCAGAGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPRRPV*SAEAGP
Trigger: AGGGCCAGCCTCTGCTGAGCAAACCGGGCGACGAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGTGCTCATAGCGGCTaGCCGCCGGCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGAHSG*PPAPPS
Trigger: AGATGGGGGAGCCGGCGGGCAGCCGCTATGAGCACC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGCTGCCGCTGCCGCTaGTCCTCCTGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICCRCR*SSCSSC
Trigger: GCAGGAGGAGCAGGAGGAGCAGCGGCAGCGGCAGCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTAGCCCCCGACGGGTaGTGGTTCTGGCCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVAPDG*WFWPAK
Trigger: CTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCTAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGTATGGGCTGCTCTaGTGTGGCTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGYGLL*CGWEWG
Trigger: CCCCCACTCCCAGCCACAGCAGAGCAGCCCATACCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGAGCCCGGCCCTGCATaGCAAGGGGATACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHEPGPA*QGDTAV
Trigger: CACAGCGGTATCCCCTTGGCATGCAGGGCCGGGCTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTGGAGCCCGGCCCTaGATGCCAAGGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPGARP*MPRGYR
Trigger: GCGGTATCCCCTTGGCATGCAGGGCCGGGCTCCAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTACCTCTGCTGGGACTaGGCCGCCGCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLYLCWD*AAAGCR
Trigger: CCTGCAGCCGGCGGCGGCGCAGTCCCAGCAGAGGTA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCAACGTTCAGGTTGGTTaGCAGCTCACGCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSINVQVG*QLTPLL
Trigger: AAGAAGTGGCGTGAGCTGGCAACCAACCTGAACGTT...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACCCATCATGTCTGGCATaGCCATGCCCTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYPSCLA*PCPAGM
Trigger: CATACCAGCAGGGCATGGGCATGCCAGACATGATGG...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACTGTACATGTCCTGCATaGCGCTGTTGGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYCTCPA*RCWAPV
Trigger: GACAGGTGCCCAACAGCGGCATGCAGGACATGTACA...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCTGCTGGCTGCCATACTaGATGTTGTACATGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFCWLPY*MLYMSP
Trigger: GGGAGACATGTACAACATGCAGTATGGCAGCCAGCA...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGATTCCGTGTGGCTaGATCTGGCCTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGIPCG*IWPGPC
Trigger: GCAGGGCCCAGGCCAGATGCAGCCACACGGAATCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCAGTGCGCGATGGTaGACAGCGGCGTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHASARW*TAASRL
Trigger: GAGACGAGACGCCGCTGTGCACCATCGCGCACTGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACACCACCACTCATCTTTaGTGCAGGCCACCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYTTTHL*CRPPPC
Trigger: ACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGTGGT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGGTCCTGAGCCTCTaGGGACGGGCACACCATCCA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGVLSL*GRAHHP
Trigger: TGGATGGTGTGCCCGTCCGCAGAGGCTCAGGACCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGGTGGGGGCTGCATGTaGATAAGGTTATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKGGGCM*IRLCWL
Trigger: GAGCCAGCATAACCTTATGCACATGCAGCCCCCACC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGATCACAGATGACAGATaGAACCAGAGAGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWITDDR*NQRVQD
Trigger: GTCCTGAACTCTCTGGTTGCATCTGTCATCTGTGAT...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGCTTTCAGTTTGTGGTTaGGGAGCAGCCCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKLSVCG*GAARSP
Trigger: TGGAGACCGGGCTGCTCCCCAACCACAAACTGAAAG...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTTTGGGGTACCCTTCGTaGGAGTTCTGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIILGYPS*EFCRGS
Trigger: GGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAA...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGACGGGTGCTGGTTCTaGCCGGCGAAGCGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHDGCWF*PAKRWK
Trigger: CTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTGGCAGCGGCGTACTaGGCGCCTAGGTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILAAAY*APRSLP
Trigger: GGGCAAGGACCTAGGCGCCCAGTACGCCGCTGCCAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCCATACCGGGCCCTaGGCCGCTGTAGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAHTGP*AAVACT
Trigger: AGTGCAAGCTACAGCGGCCCAGGGCCCGGTATGGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTCCTTGTCCATGCATCTaGTTGTTGGCATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAPCPCI*LLALMP
Trigger: GGGCATCAATGCCAACAACCAGATGCATGGACAAGG...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGTTCACAGTGGGCATTaGTGGGCCCATTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIVHSGH*WAHSWP
Trigger: GGGCCAGGAATGGGCCCACCAATGCCCACTGTGAAC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTGGGTGCTCATCAGGCTaGAGTTGTTGTTCATGGACT +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERGCSSG*SCCSWT
Trigger: AGTCCATGAACAACAACTCCAGCCTGATGAGCACCC...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp CAGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTCTTCCGCTTTGCATaGGAGTCATCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: QQLGIVRKCEAKGDSFVGFFRFA*ESSVHE
Trigger: CTCATGGACAGATGACTCCCATGCAAAGCGGAAGAA...GCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTGTGGGAGGGCCTTaGCCTGGGTACTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPVGGP*PGYCCP
Trigger: CGGACAGCAGTACCCAGGCCAAGGCCCTCCCACAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACGGTGGCTGTCCTGTaGGAGGGCCTTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTVAVL*EGLGLG
Trigger: ACCCAGGCCAAGGCCCTCCCACAGGACAGCCACCGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTCCCTCGTGCCGCTTaGCTGGAGGCCCGTACATGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLPRAA*LEARTC
Trigger: GCATGTACGGGCCTCCAGCCAAGCGGCACGAGGGAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCTACATCTCCTGCTGCTaGCTGCCATACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFYISCC*LPYCML
Trigger: CAACATGCAGTATGGCAGCCAGCAGCAGGAGATGTA...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTATTCAGGCAGAGCCCCTaGCCGGGCAGACAAGACGTC +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVFRQSP*PGRQDV
Trigger: GACGTCTTGTCTGCCCGGCCAGGGGCTCTGCCTGAA...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGTCGGTCTGGGGTCCTaGGTTGGTGTCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRVGLGS*VGVFRQ
Trigger: CTGCCTGAAGACACCAACCCAGGACCCCAGACCGAC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTGCCAGTGCGCGATaGTGCACAGCGGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPASAR*CTAASR
Trigger: ACGAGACGCCGCTGTGCACCATCGCGCACTGGCAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACAGAGCTGGGAGACATTaGGGAAGGGACAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYRAGRH*GRDRQV
Trigger: AACCTGCCTGTCCCTTCCCCAATGTCTCCCAGCTCT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGCTGGAGAGGTGAGGTaGTGCATGTGGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIAGEVR*CMWGER
Trigger: CCTTTCTCCCCACATGCATCACCTCACCTCTCCAGC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCAACAGGAGAAGGTaGCGGCCCTCCAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHANRRR*RPSRDA
Trigger: AGCATCCCTGGAGGGCCGTCACCTTCTCCTGTTGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGATGGGAACTGGATTCTaGCTGGCTTCCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKMGTGF*LASRWL
Trigger: CAACCACCTGGAAGCCAGTCAGAATCCAGTTCCCAT...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR TCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTTCTGGTTGTTGGCATTaGTGCCCATACCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIISGCWH*CPYRAL
Trigger: CAGGGCCCGGTATGGGCATCAATGCCAACAACCAGA...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGTTCTGCATCCCAGCTaGAGGCATTCGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVVLHPS*RHSSQG
Trigger: CCCCTGGGACGAATGCCTTCAGCTGGGATGCAGAAC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGGAGTCATCTGTCCATaGGGGGTAGAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRGVICP*GVEAGV
Trigger: AACCCCAGCCTCTACCCCTCATGGACAGATGACTCC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGCGCTGGCTGACGTaGGAAGGCCACTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWRWLT*EGHWLS
Trigger: CGAGAGCCAGTGGCCTTCTCACGTCAGCCAGCGCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAAGGCTGGCGCTGGCTaGCGTGAGAAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIKAGAG*REKATG
Trigger: GCCAGTGGCCTTCTCACGTCAGCCAGCGCCAGCCTT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCAGCGCTTGGCCAGTaGGTCCTGCCAGTGCGCGAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAALGQ*VLPVRD
Trigger: ATCGCGCACTGGCAGGACTCACTGGCCAAGCGCTGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTTGTTGTCCTGGATACTaGGTTTACACAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERCCPGY*VYTGSP
Trigger: TGGAGACCCTGTGTAAACTCAGTATCCAGGACAACA...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTGTTGTCCTGGATACTaGGTTTACACAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWACCPGY*VYTGSP
Trigger: TGGAGACCCTGTGTAAACTCAGTATCCAGGACAACA...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTGGCGCCTCCATGTTaGGGCTGCTCCATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLAPPC*GCSMSG
Trigger: CCCGGACATGGAGCAGCCGCAACATGGAGGCGCCAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTCGTCGCCCGGTTTaGTCAGCAGAGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPRRPV*SAEAGP
Trigger: AGGGCCAGCCTCTGCTGAGCAAACCGGGCGACGAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCGGTGCTCATAGCGGCTaGCCGCCGGCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLGAHSG*PPAPPS
Trigger: AGATGGGGGAGCCGGCGGGCAGCCGCTATGAGCACC...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGTATGGGCTGCTCTaGTGTGGCTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGYGLL*CGWEWG
Trigger: CCCCCACTCCCAGCCACAGCAGAGCAGCCCATACCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGAGCCCGGCCCTGCATaGCAAGGGGATACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIEPGPA*QGDTAV
Trigger: CACAGCGGTATCCCCTTGGCATGCAGGGCCGGGCTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGTTACTGATCCCAGGATaGATCTGGCCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKLLIPG*IWPPGD
Trigger: ATCTCCTGGGGGCCAGATGCATCCTGGGATCAGTAA...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTTGGGCCGCTGTAGCTTaGACTGGGTACCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIWAAVA*TGYPAI
Trigger: TATAGCGGGGTACCCAGTGCAAGCTACAGCGGCCCA...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTCCAGGAAAACTGCCTTaGCTGCTTTGTGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERPGKLP*LLCAEF
Trigger: AAACTCAGCACAAAGCAGGCAAGGCAGTTTTCCTGG...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCATTGTGGGCGTCATaGTGTAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPLWAS*CRAGPG
Trigger: CCCAGGCCCAGCCCTACAGCATGACGCCCACAATGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGTCCAGGGGCTTCTTaGCCACTGCTGGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGPGAS*PLLADW
Trigger: CCAGTCTGCCAGCAGTGGGCAAGAAGCCCCTGGACC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTACATGTCTCCCTCGTaGCGCTTGGCTGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHYMSPS*RLAGGP
Trigger: CGGGCCTCCAGCCAAGCGGCACGAGGGAGACATGTA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTTTATACATCTCCTGCTaGTGGCTGCCATACTGCATG +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWALYISC*WLPYCM
Trigger: CATGCAGTATGGCAGCCAGCAGCAGGAGATGTATAA...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGATTCCGTGTGGCTaGATCTGGCCTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGIPCG*IWPGPC
Trigger: GCAGGGCCCAGGCCAGATGCAGCCACACGGAATCCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGCCCGGGCCTTGCCTaGTCTGGTAGGGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRPGLA*SGRDKA
Trigger: TGCCTTATCCCTACCAGAGCAGGCAAGGCCCGGGCG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCCATCATATCATCTGTaGGGTTCATGCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFPSYHL*GSCLGK
Trigger: CTTACCCAGGCATGAACCGCACAGATGATATGATGG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGAGGCGGGGCTGGGTaGCCTGGAGATGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGGGAG*PGDVVW
Trigger: CCAAACCACATCTCCAGGGCACCCAGCCCCGCCTCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGACAGCTAGGGCAGGGCTaGTCTTCCCCTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRQLGQG*SSPLTL
Trigger: TAGAGTCAGAGGGGAAGAGCAGCCCTGCCCTAGCTG...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACCGGTGGCTTTTGGCCTaGTGGATTCCAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYRWLLA*WIPKGN
Trigger: GTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCACCG...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCAGTGCGCGATGGTaGACAGCGGCGTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIASARW*TAASRL
Trigger: GAGACGAGACGCCGCTGTGCACCATCGCGCACTGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGTGAGTCCTGCCAGTaGGCGATGGTGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSESCQ*AMVHSG
Trigger: GCCGCTGTGCACCATCGCGCACTGGCAGGACTCACT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGGTCCTGAGCCTCTaGGGACGGGCACACCATCCA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGVLSL*GRAHHP
Trigger: TGGATGGTGTGCCCGTCCGCAGAGGCTCAGGACCCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGCTCTGCTGGTACTaGGCCATCGTCACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWLCWY*AIVTPS
Trigger: GGACGGGGTGACGATGGCGCAGTACCAGCAGAGCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGCGGCTGCGGCTGCTaGAACTGGTTTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGGCGC*NWFSCC
Trigger: GCAGCAGCTAAACCAGTTCCAGCAGCCGCAGCCGCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCGCGACACTGTCCTTaGCGCCTCCATGTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPRHCP*RLHVAA
Trigger: AGCCGCAACATGGAGGCGCCAAGGACAGTGTCGCGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGACGGGTGCTGGTTCTaGCCGGCGAAGCGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIDGCWF*PAKRWK
Trigger: CTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCCATCGGGCTGCCCTaGGATCTGCCCATGGTCGGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSIGLP*DLPMVG
Trigger: ACCGACCATGGGCAGATCCCAGGGCAGCCCGATGGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGGCTGCTCTGCTGTaGCTGGGAGTGGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWAALL*LGVGVS
Trigger: ACTCACCCCCACTCCCAGCCACAGCAGAGCAGCCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGAACTGGATTCTGACTaGCTTCCAGGTGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKELDSD*LPGGCG
Trigger: TCCGCAACCACCTGGAAGCCAGTCAGAATCCAGTTC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGTGGCTCAAGGCAGGATaGGAACTGGATTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKWLKAG*ELDSDW
Trigger: CCAGTCAGAATCCAGTTCCCATCCTGCCTTGAGCCA...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGTGAGGCGACATGGATaGTCCTGTCTGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIVRRHG*SCLLRS
Trigger: GGACCTCAGCAGACAGGACCATCCATGTCGCCTCAC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTGGCCCCCAGGAGATaGGTGAGGCGACATGGATGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLAPRR*VRRHGW
Trigger: CCATCCATGTCGCCTCACCCATCTCCTGGGGGCCAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTACCCCGCTATATGTTaGGGTTCTGGAGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTYPAIC*GSGVVA
Trigger: GGCAACTACTCCAGAACCCCAACATATAGCGGGGTA...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCCATACCGGGCCCTaGGCCGCTGTAGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAHTGP*AAVACT
Trigger: AGTGCAAGCTACAGCGGCCCAGGGCCCGGTATGGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTACCACATGGCTGGGCTaGCCCTTGTCCATGCATCTG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIITTWLG*PLSMHL
Trigger: CAGATGCATGGACAAGGGCCAGCCCAGCCATGTGGT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGCATAGCACCACATaGCTGGGCTGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGHSTT*LGWPLS
Trigger: GGACAAGGGCCAGCCCAGCCATGTGGTGCTATGCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATGGTGGGCCCATTCCTaGCCCTCCCTGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRWWAHS*PSLLRH
Trigger: ATGTCTCAACAGGGAGGGCCAGGAATGGGCCCACCA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCACAGTGGGCATTGGTaGGCCCATTCCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHHSGHW*AHSWPS
Trigger: GGAGGGCCAGGAATGGGCCCACCAATGCCCACTGTG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGAGGCACAGACAATTTaGACTCACTGGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIEAQTI*THWETS
Trigger: TGATGTCTCCCAGTGAGTCCAAATTGTCTGTGCCTC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACGGGCGTTTGGAGTCATaGAGTTCCGTTTTGGGTACG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYGRLES*SSVLGT
Trigger: CGTACCCAAAACGGAACTCCATGACTCCAAACGCCC...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTGTGGGAGGGCCTTaGCCTGGGTACTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPVGGP*PGYCCP
Trigger: CGGACAGCAGTACCCAGGCCAAGGCCCTCCCACAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACGGTGGCTGTCCTGTaGGAGGGCCTTGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITVAVL*EGLGLG
Trigger: ACCCAGGCCAAGGCCCTCCCACAGGACAGCCACCGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGTGTCCTCCATACGGTaGCTGTCCTGTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHVSSIR*LSCGRA
Trigger: GGCCCTCCCACAGGACAGCCACCGTATGGAGGACAC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGTACAGGCCAGGCTaGTGTCCTCCATACGGTGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGYRPG*CPPYGG
Trigger: GCCACCGTATGGAGGACACCAGCCTGGCCTGTACCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTCCCTCGTGCCGCTTaGCTGGAGGCCCGTACATGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILPRAA*LEARTC
Trigger: GCATGTACGGGCCTCCAGCCAAGCGGCACGAGGGAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCGTGTGGCTGCATCTaGCCTGGGCCCTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPCGCI*PGPCIL
Trigger: AAGGATGCAGGGCCCAGGCCAGATGCAGCCACACGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGGTGGGATTCCGTGTaGCTGCATCTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRWDSV*LHLAWA
Trigger: GGCCCAGGCCAGATGCAGCCACACGGAATCCCACCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTGAGGCCCCTCGCTaGAGGATGACTGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAEAPR*RMTAWG
Trigger: GCCCCATGCAGTCATCCTCCAGCGAGGGGCCTCAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGTGCCCTGGAGATGTaGTTTGGCAGTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGALEM*FGSDGG
Trigger: GCCGCCGTCACTGCCAAACCACATCTCCAGGGCACC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGAAGGAGGCGGGGCTaGGTGCCCTGGAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGRRRG*VPWRCG
Trigger: ACCACATCTCCAGGGCACCCAGCCCCGCCTCCTTCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGCTTTGGCGTCTCCTTaGGGTCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVALASP*GPRRHL
Trigger: CAGATGCCTCCGTGGACCCCAAGGAGACGCCAAAGC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTCAGGCAGAGCCCCTaGCCGGGCAGACAAGACGTC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHFRQSP*PGRQDV
Trigger: GACGTCTTGTCTGCCCGGCCAGGGGCTCTGCCTGAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTCGTCTCGGCTCCTaGGCTCGTCTTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSRLGS*ARLPGA
Trigger: GGCTCCTGGAAGACGAGCCCAGGAGCCGAGACGAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTGCCAGTGCGCGATaGTGCACAGCGGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPASAR*CTAASR
Trigger: ACGAGACGCCGCTGTGCACCATCGCGCACTGGCAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAAGTTGGGCCCCACAGTaGGAAAGGGGTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVSWAPQ*ERGPEP
Trigger: AGGCTCAGGACCCCTTTCCCACTGTGGGGCCCAACT...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACTGCATAAGGTTATGCTaGCTCTGCTGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYCIRLC*LCWYCA
Trigger: GGCGCAGTACCAGCAGAGCCAGCATAACCTTATGCA...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGTCCACTCTGGCCATaGCCAGCAGAGCTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRPLWP*PAELWP
Trigger: CGGCCAAAGCTCTGCTGGCCATGGCCAGAGTGGACG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGCAACTCGGTATCGTCAGGAAATGTGAAGCAAAGGGTGACTCTTTCGTGGGCTGCCTGTCATAAAACCTaGAATACTCGCAGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SNSVSSGNVKQRVTLSWAACHKT*NTRRGD
Trigger: ATCTCCCCTGCGAGTATTCCAGGTTTTATGACAGGC...AGCCCACGAAAGAGTCACCCTTTGCTTCACATTTCCTGACGATACCGAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCATCATGGGGCTGGGTaGGGTGAGCAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHHHGAG*GEQLVE
Trigger: CTCAACCAGCTGCTCACCTCACCCAGCCCCATGATG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCTTGAGTTACTCTGCTaGAAGTTACTGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFLELLC*KLLIPG
Trigger: TCCTGGGATCAGTAACTTTCAGCAGAGTAACTCAAG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGCCGTACGTGCCACTTaGGTTACTCTGCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKAVRAT*VTLLKV
Trigger: AACTTTCAGCAGAGTAACTCAAGTGGCACGTACGGC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCAGGAGAACTGGGGGTaGCGCTGCTCATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHQENWG*RCSWFQ
Trigger: CTGGAACCATGAGCAGCGTCACCCCCAGTTCTCCTG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTGGCCCTCCCTGTTaGGACATGCCAGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPGPPC*DMPGEL
Trigger: CAGTTCTCCTGGCATGTCTCAACAGGGAGGGCCAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCGAATCCCCGGTGCTaGAGACTTCAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSNPRC*RLQVGA
Trigger: AGCCCCCACCTGAAGTCTTCAGCACCGGGGATTCGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTCTTTTCTCATTCCACTaGAAGGGTCCTTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERLFSFH*KGPCWV
Trigger: AACCCAACAAGGACCCTTTCAGTGGAATGAGAAAAG...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTGGCGCTGGCTGACGTaGGAAGGCCACTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLWRWLT*EGHWLS
Trigger: CGAGAGCCAGTGGCCTTCTCACGTCAGCCAGCGCCA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGGCGTCTGGTAGGATaGCTGAGGTGGGCGCGTGAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRRLVG*LRWARD
Trigger: ATCACGCGCCCACCTCAGTCATCCTACCAGACGCCG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGATGTGGTTTGGCAGTaGCGGCGGCGTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHDVVWQ*RRRLVG
Trigger: TCCTACCAGACGCCGCCGTCACTGCCAAACCACATC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCACAGTACATCACAGATaGCAGATGCAACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFTVHHR*QMQPES
Trigger: ACTCTCTGGTTGCATCTGTCATCTGTGATGTACTGT...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTGGCGCCTCCATGTTaGGGCTGCTCCATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILAPPC*GCSMSG
Trigger: CCCGGACATGGAGCAGCCGCAACATGGAGGCGCCAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTCCTGGGTATGGGCTaGTCTGCTGTGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLLGMG*SAVAGS
Trigger: ACTCCCAGCCACAGCAGAGCAGCCCATACCCAGGAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAAGGGGATACCGCTGTaGACCTGGGGGACCGTAGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHKGIPL*TWGTVG
Trigger: TCCTACGGTCCCCCAGGTGCACAGCGGTATCCCCTT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACGGCCCTCCAGGGATaGTGGAGAGGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTALQG*WRGEVM
Trigger: CATCACCTCACCTCTCCAGCATCCCTGGAGGGCCGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTATGGGCCGCTGTAGCTTaGACTGGGTACCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVWAAVA*TGYPAI
Trigger: TATAGCGGGGTACCCAGTGCAAGCTACAGCGGCCCA...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGCCTGCATCACAGCTaGGGCAGCTTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSLHHS*GSFLGL
Trigger: AAGGCCCAGGAAGCTGCCGCAGCTGTGATGCAGGCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGGGCTGGGCCTGGGTaGTCATCAGGCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRAGPG*SSGWSC
Trigger: ACAACTCCAGCCTGATGAGCACCCAGGCCCAGCCCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCATTGTGGGCGTCATaGTGTAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPLWAS*CRAGPG
Trigger: CCCAGGCCCAGCCCTACAGCATGACGCCCACAATGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ACTGGACTGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCGGGAGACATCATATCTaGAAGACCCATAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TGLQRTQHNPARSKGLSIGRHHI*KTHRCC
Trigger: ACAGCATCTATGGGTCTTGCAGATATGATGTCTCCC...GATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGTCCAGGGGCTTCTTaGCCACTGCTGGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGPGAS*PLLADW
Trigger: CCAGTCTGCCAGCAGTGGGCAAGAAGCCCCTGGACC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTTGTTTTTATTAACCTaGGCCAAACCTCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLLFLLT*AKPPIS
Trigger: GGAGATTGGAGGTTTGGCGCAGGTTAATAAAAACAA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACAACGTTCAGGTTGGTTaGCAGCTCACGCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYNVQVG*QLTPLL
Trigger: AAGAAGTGGCGTGAGCTGGCAACCAACCTGAACGTT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATTTCAGAGAGCTGGCTaGGCTGCTGGAAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRFQRAG*AAGSAN
Trigger: GTTGGCACTTCCAGCAGCGCAGCCAGCTCTCTGAAA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCCATCATGTCTGGCATaGCCATGCCCTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIPSCLA*PCPAGM
Trigger: CATACCAGCAGGGCATGGGCATGCCAGACATGATGG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTCCATCATATCATCTGTaGGGTTCATGCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTPSYHL*GSCLGK
Trigger: CTTACCCAGGCATGAACCGCACAGATGATATGATGG...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGTGGGCATGACCTTCTaGATCTTCATGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIVGMTF*IFMVGR
Trigger: CCTGCCCACCATGAAGATGCAGAAGGTCATGCCCAC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGTCCAGAGCCCACGTaGTCTCAGCCAACAGACCCG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCPEPT*SQPTDP
Trigger: CGGGTCTGTTGGCTGAGAGCACGTGGGCTCTGGACA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGTGAGTCCTGCCAGTaGGCGATGGTGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISESCQ*AMVHSG
Trigger: GCCGCTGTGCACCATCGCGCACTGGCAGGACTCACT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTGGCCAGTGAGTCCTaGCAGTGCGCGATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLASES*QCAMVH
Trigger: GTGCACCATCGCGCACTGGCAGGACTCACTGGCCAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAACCACTCATCTTTGCTaGAGGCCACCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRTTHLC*RPPPCP
Trigger: AGGACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGT...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCGGGGTCCTGAGCCTCTaGGGACGGGCACACCATCCA +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLGVLSL*GRAHHP
Trigger: TGGATGGTGTGCCCGTCCGCAGAGGCTCAGGACCCC...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCATCACAGATGACAGATaGAACCAGAGAGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLITDDR*NQRVQD
Trigger: GTCCTGAACTCTCTGGTTGCATCTGTCATCTGTGAT...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAAGGGACAGGCAGGTTaGCTGGGGTTGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIKGQAG*LGLEAG
Trigger: CCCAGCCTCCAACCCCAGGCAACCTGCCTGTCCCTT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGCTGCTGTAGTGCGTaGTGGTGGTGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCCCSA*WWWRWW
Trigger: CCACCACCTCCACCACCACCACGCACTACAGCAGCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGCGGCTGCGGCTGCTaGAACTGGTTTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGGCGC*NWFSCC
Trigger: GCAGCAGCTAAACCAGTTCCAGCAGCCGCAGCCGCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGCCCAGGCTGTTGTTaGCAGTGGGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRPGCC*QWDAAA
Trigger: AGCAGCAGCATCCCACTGCCAACAACAGCCTGGGCG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCGCGACACTGTCCTTaGCGCCTCCATGTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPRHCP*RLHVAA
Trigger: AGCCGCAACATGGAGGCGCCAAGGACAGTGTCGCGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCCATCGGGCTGCCCTaGGATCTGCCCATGGTCGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISIGLP*DLPMVG
Trigger: ACCGACCATGGGCAGATCCCAGGGCAGCCCGATGGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGGCTGCTCTGCTGTaGCTGGGAGTGGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWAALL*LGVGVS
Trigger: ACTCACCCCCACTCCCAGCCACAGCAGAGCAGCCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTATGGGTGAGGCGACATaGATGGTCCTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIMGEAT*MVLSAE
Trigger: CTCAGCAGACAGGACCATCCATGTCGCCTCACCCAT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTGGCCCCCAGGAGATaGGTGAGGCGACATGGATGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILAPRR*VRRHGW
Trigger: CCATCCATGTCGCCTCACCCATCTCCTGGGGGCCAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGTACCCCGCTATATGTTaGGGTTCTGGAGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKYPAIC*GSGVVA
Trigger: GGCAACTACTCCAGAACCCCAACATATAGCGGGGTA...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCGCCCATACCGGGCCCTaGGCCGCTGTAGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLAHTGP*AAVACT
Trigger: AGTGCAAGCTACAGCGGCCCAGGGCCCGGTATGGGC...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACCCTTGTCCATGCATCTaGTTGTTGGCATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYPCPCI*LLALMP
Trigger: GGGCATCAATGCCAACAACCAGATGCATGGACAAGG...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGCATAGCACCACATaGCTGGGCTGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGHSTT*LGWPLS
Trigger: GGACAAGGGCCAGCCCAGCCATGTGGTGCTATGCCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCACAGTGGGCATTGGTaGGCCCATTCCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIHSGHW*AHSWPS
Trigger: GGAGGGCCAGGAATGGGCCCACCAATGCCCACTGTG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGTTCACAGTGGGCATTaGTGGGCCCATTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHVHSGH*WAHSWP
Trigger: GGGCCAGGAATGGGCCCACCAATGCCCACTGTGAAC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTGCGGCAGCTTCCTaGGCCTTCCGGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAAAAS*AFRFTV
Trigger: CACTGTGAACCGGAAGGCCCAGGAAGCTGCCGCAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGTAGAGGCTGGGGTTaGTGGCTTCAGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGRGWG*WLQVTW
Trigger: CCAGGTGACCTGAAGCCACCAACCCCAGCCTCTACC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCATGCCCTGCTGGTATaGGGCGTTTGGAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIHALLV*GVWSHG
Trigger: TCCATGACTCCAAACGCCCCATACCAGCAGGGCATG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTGCCCATCATGTCTaGCATGCCCATGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPAHHV*HAHALL
Trigger: CAGCAGGGCATGGGCATGCCAGACATGATGGGCAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTGTCCTCCATACGGTaGCTGTCCTGTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVSSIR*LSCGRA
Trigger: GGCCCTCCCACAGGACAGCCACCGTATGGAGGACAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGTACAGGCCAGGCTaGTGTCCTCCATACGGTGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGYRPG*CPPYGG
Trigger: GCCACCGTATGGAGGACACCAGCCTGGCCTGTACCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCGTGTGGCTGCATCTaGCCTGGGCCCTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPCGCI*PGPCIL
Trigger: AAGGATGCAGGGCCCAGGCCAGATGCAGCCACACGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGGTGGGATTCCGTGTaGCTGCATCTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRWDSV*LHLAWA
Trigger: GGCCCAGGCCAGATGCAGCCACACGGAATCCCACCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCCCCATCATCTGAGGTaGGATTCCGTGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIPHHLR*DSVWLH
Trigger: ATGCAGCCACACGGAATCCCACCTCAGATGATGGGG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGTGCCCTGGAGATGTaGTTTGGCAGTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGALEM*FGSDGG
Trigger: GCCGCCGTCACTGCCAAACCACATCTCCAGGGCACC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCTTTGGCGTCTCCTTaGGGTCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHALASP*GPRRHL
Trigger: CAGATGCCTCCGTGGACCCCAAGGAGACGCCAAAGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTCAGGCAGAGCCCCTaGCCGGGCAGACAAGACGTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIFRQSP*PGRQDV
Trigger: GACGTCTTGTCTGCCCGGCCAGGGGCTCTGCCTGAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTGGGGTCCTGGGTTaGTGTCTTCAGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSGVLG*CLQAEP
Trigger: GGGCTCTGCCTGAAGACACCAACCCAGGACCCCAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGTCGGTCTGGGGTCCTaGGTTGGTGTCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHVGLGS*VGVFRQ
Trigger: CTGCCTGAAGACACCAACCCAGGACCCCAGACCGAC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTACTTCTCATAGGTCTGTaGCGCCCGCTTTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVLLIGL*RPLSLR
Trigger: CCGGAGAGAAAGCGGGCGCCACAGACCTATGAGAAG...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGTTGGGCCCCACAGTaGGAAAGGGGTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSWAPQ*ERGPEP
Trigger: AGGCTCAGGACCCCTTTCCCACTGTGGGGCCCAACT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCCATTTCTCGACAGACTaGATTTTTGCGATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFHFSTD*IFAIPN
Trigger: GTTGGGGATCGCAAAAATCCAGTCTGTCGAGAAATG...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGCCAGTGTGTCCCCCTaGGCAAGGTTCGATAAAAGC +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRASVSP*ARFDKS
Trigger: GCTTTTATCGAACCTTGCCCAGGGGGACACACTGGC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGCCAGCAGAGCTTTaGCCGCCCGGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWPAEL*PPGTSC
Trigger: ACATGATGTGCCGGGCGGCCAAAGCTCTGCTGGCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGTCCACTCTGGCCATaGCCAGCAGAGCTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRPLWP*PAELWP
Trigger: CGGCCAAAGCTCTGCTGGCCATGGCCAGAGTGGACG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTAGAGCTGGGAGACATTaGGGAAGGGACAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIRAGRH*GRDRQV
Trigger: AACCTGCCTGTCCCTTCCCCAATGTCTCCCAGCTCT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATGTCTTGGGCCAGCCTaGGCTGCTAATGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRCLGPA*AANAVT
Trigger: AGTGACAGCATTAGCAGCCCAGGCTGGCCCAAGACA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACCCCATCCCATACAACTaGGGTCTCTTCATCACCATT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYPIPYN*GLFITI
Trigger: AATGGTGATGAAGAGACCTCAGTTGTATGGGATGGG...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCTGGAGAGGTGAGGTaGTGCATGTGGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAGEVR*CMWGER
Trigger: CCTTTCTCCCCACATGCATCACCTCACCTCTCCAGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTGGTTGTTGGCATTaGTGCCCATACCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSGCWH*CPYRAL
Trigger: CAGGGCCCGGTATGGGCATCAATGCCAACAACCAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTTCTGCATCCCAGCTaGAGGCATTCGTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVLHPS*RHSSQG
Trigger: CCCCTGGGACGAATGCCTTCAGCTGGGATGCAGAAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTGGCCCTCCCTGTTaGGACATGCCAGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPGPPC*DMPGEL
Trigger: CAGTTCTCCTGGCATGTCTCAACAGGGAGGGCCAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGAATTGCTCCCAGTTaGCTGTGGAGTCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRIAPS*LWSLWA
Trigger: GGCCCACAGACTCCACAGTCAACTGGGAGCAATTCG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGAGTCATCTGTCCATaGGGGGTAGAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGVICP*GVEAGV
Trigger: AACCCCAGCCTCTACCCCTCATGGACAGATGACTCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGCCACTGGCTCTCGTaGTTGATCCTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGHWLS*LILCSG
Trigger: ACCTGAGCAGAGGATCAATCACGAGAGCCAGTGGCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGATGTGGTTTGGCAGTaGCGGCGGCGTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIDVVWQ*RRRLVG
Trigger: TCCTACCAGACGCCGCCGTCACTGCCAAACCACATC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTCCTGGGTATGGGCTaGTCTGCTGTGGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILLGMG*SAVAGS
Trigger: ACTCCCAGCCACAGCAGAGCAGCCCATACCCAGGAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAAGGGGATACCGCTGTaGACCTGGGGGACCGTAGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIKGIPL*TWGTVG
Trigger: TCCTACGGTCCCCCAGGTGCACAGCGGTATCCCCTT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTTGCTGTCCGTACTaGGGTGGCATCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIACCPY*GGICCC
Trigger: GCAGCAGCAGATGCCACCGCAGTACGGACAGCAAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGGCCGCTGTAGCTTaGACTGGGTACCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWAAVA*TGYPAI
Trigger: TATAGCGGGGTACCCAGTGCAAGCTACAGCGGCCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGGGAAATGGTCTGTTCTaGATCCCAGCTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKGNGLF*IPAEGI
Trigger: AATGCCTTCAGCTGGGATGCAGAACAGACCATTTCC...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGCCTGCATCACAGCTaGGGCAGCTTCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISLHHS*GSFLGL
Trigger: AAGGCCCAGGAAGCTGCCGCAGCTGTGATGCAGGCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGCCAGGAAAACTGCCTTaGCTGCTTTGTGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKPGKLP*LLCAEF
Trigger: AAACTCAGCACAAAGCAGGCAAGGCAGTTTTCCTGG...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCCCATTGTGGGCGTCATaGTGTAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLPLWAS*CRAGPG
Trigger: CCCAGGCCCAGCCCTACAGCATGACGCCCACAATGG...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TGGGATTGGGCAGCATCATGGTTTATCTCACAGTCTGATTCTCCCCAGGCCTGGTTCTTCTTTACCATCTaGTTTAAGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: WDWAASWFISQSDSPQAWFFFTI*FKRHRQ
Trigger: TTGTCTGTGCCTCTTAAAGCAGATGGTAAAGAAGAA...CCAGGCCTGGGGAGAATCAGACTGTGAGATAAACCATGATGCTGCCCAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TACCCAGGAAGAAGCACTTTCCATCAGGGTGGGGTATTAGAGAGCCAGGGACTGTTCTTCTTTACCATCTaGTTTAAGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: YPGRSTFHQGGVLESQGLFFFTI*FKRHRQ
Trigger: TTGTCTGTGCCTCTTAAAGCAGATGGTAAAGAAGAA...CAGTCCCTGGCTCTCTAATACCCCACCCTGATGGAAAGTGCTTCTTCCTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTACTGCGCTGCTGGAAGTaGCAACGTTCAGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVLRCWK*QRSGWL
Trigger: CAACCAACCTGAACGTTGGCACTTCCAGCAGCGCAG...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGCATGCCCATGCCCTaGTGGTATGGGGCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGMPMP*WYGAFG
Trigger: TCCAAACGCCCCATACCAGCAGGGCATGGGCATGCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGTTCATAGGGCATCCTaGCCATCATGTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRVHRAS*PSCLAC
Trigger: GCATGCCAGACATGATGGGCAGGATGCCCTATGAAC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGTCCAGAGCCCACGTaGTCTCAGCCAACAGACCCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICPEPT*SQPTDP
Trigger: CGGGTCTGTTGGCTGAGAGCACGTGGGCTCTGGACA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCAGCTAGGGCAGGGCTaGTCTTCCCCTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHQLGQG*SSPLTL
Trigger: TAGAGTCAGAGGGGAAGAGCAGCCCTGCCCTAGCTG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTGGCCAGTGAGTCCTaGCAGTGCGCGATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILASES*QCAMVH
Trigger: GTGCACCATCGCGCACTGGCAGGACTCACTGGCCAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAACCACCACTCATCTTTaGTGCAGGCCACCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVTTTHL*CRPPPC
Trigger: ACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGTGGT...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGCAGACAAGTCTAGCTaGCCGGAAATGTTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRADKSS*PEMFAN
Trigger: GTTGGCGAACATTTCCGGGCAGCTAGACTTGTCTGC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTGGCTCTGCTGGTACTaGGCCATCGTCACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLWLCWY*AIVTPS
Trigger: GGACGGGGTGACGATGGCGCAGTACCAGCAGAGCCA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGATGTGCATAAGGTTATaGTGGCTCTGCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKMCIRL*WLCWYC
Trigger: GCAGTACCAGCAGAGCCAGCATAACCTTATGCACAT...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCATGAAAGGAGGAGATaGTGGCAGAGCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIHERRR*WQSWET
Trigger: TGTCTCCCAGCTCTGCCAGCATCTCCTCCTTTCATG...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGCCCAGGCTGTTGTTaGCAGTGGGATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRPGCC*QWDAAA
Trigger: AGCAGCAGCATCCCACTGCCAACAACAGCCTGGGCG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTGGGGTACCCTTCGTaGGAGTTCTGCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILGYPS*EFCRGS
Trigger: GGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGTGAGGTGAGCAGCTaGTTGAGGGTCGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGEVSS*LRVGVA
Trigger: GGCTACACCGACCCTCAACCAGCTGCTCACCTCACC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATGTCCTGCTGTGGCTaGTACCTCTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHMSCCG*YLCWDC
Trigger: GCAGTCCCAGCAGAGGTACCAGCCACAGCAGGACAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCCTCCAGGGATGCTaGAGAGGTGAGGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHALQGC*RGEVMH
Trigger: ATGCATCACCTCACCTCTCCAGCATCCCTGGAGGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTAGGCATCTGGCTACCTaGAATACTCGCAGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIRHLAT*NTRRGD
Trigger: ATCTCCCCTGCGAGTATTCCAGGTAGCCAGATGCCT...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115797.9
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTTGGGGTCCATACTaGCTCATCTGTGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPWGPY*LICGPY
Trigger: GTACGGCCCACAGATGAGCCAGTATGGACCCCAAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACCACATGGCTGGGCTaGCCCTTGTCCATGCATCTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTTWLG*PLSMHL
Trigger: CAGATGCATGGACAAGGGCCAGCCCAGCCATGTGGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATAGCACCACATGGCTaGGCTGGCCCTTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHIAPHG*AGPCPC
Trigger: GCATGGACAAGGGCCAGCCCAGCCATGTGGTGCTAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTTCCGGTTCACAGTaGGCATTGGTGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPSGSQ*ALVGPF
Trigger: GAATGGGCCCACCAATGCCCACTGTGAACCGGAAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTTCTTGCCCACTGCTaGCAGACTGGACACCGGGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILLAHC*QTGHRG
Trigger: TCCCCGGTGTCCAGTCTGCCAGCAGTGGGCAAGAAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGCTGGCTGCGCTGCTaGAAGTGCCAACGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSWLRC*KCQRSG
Trigger: ACCTGAACGTTGGCACTTCCAGCAGCGCAGCCAGCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGCTTTTTCAGAGAGCTaGCTGCGCTGCTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVAFSES*LRCWKC
Trigger: GCACTTCCAGCAGCGCAGCCAGCTCTCTGAAAAAGC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATGCCCATGCCCTGCTaGTATGGGGCGTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHMPMPC*YGAFGV
Trigger: GACTCCAAACGCCCCATACCAGCAGGGCATGGGCAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTGCATGCCGCTGTTaGGCACCTGTCCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPACRC*APVLVS
Trigger: TGACACAAGGACAGGTGCCCAACAGCGGCATGCAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGCCCAGATTGGACATaGCCCCTGAGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICPDWT*PLRGSG
Trigger: ACCAGAGCCCCTCAGGGGCCATGTCCAATCTGGGCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCGGGTACAGGCCAGGCTaGTGTCCTCCATACGGTGGC +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLGYRPG*CPPYGG
Trigger: GCCACCGTATGGAGGACACCAGCCTGGCCTGTACCC...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCCCGTGTGGCTGCATCTaGCCTGGGCCCTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLPCGCI*PGPCIL
Trigger: AAGGATGCAGGGCCCAGGCCAGATGCAGCCACACGG...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTTTGGCGTCTCCTTaGGGTCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIALASP*GPRRHL
Trigger: CAGATGCCTCCGTGGACCCCAAGGAGACGCCAAAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTTACTGGCCTGCTTTaGCGTCTCCTTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLTGLL*RLLGVH
Trigger: GTGGACCCCAAGGAGACGCCAAAGCAGGCCAGTAAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCTGGGGTCCTGGGTTaGTGTCTTCAGGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISGVLG*CLQAEP
Trigger: GGGCTCTGCCTGAAGACACCAACCCAGGACCCCAGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTCGGTCTGGGGTCCTaGGTTGGTGTCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVGLGS*VGVFRQ
Trigger: CTGCCTGAAGACACCAACCCAGGACCCCAGACCGAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCACAGATGCAGCGCTTaGCCAGTGAGTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHHRCSA*PVSPAS
Trigger: ACTGGCAGGACTCACTGGCCAAGCGCTGCATCTGTG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTTCTCATAGGTCTGTaGCGCCCGCTTTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLLIGL*RPLSLR
Trigger: CCGGAGAGAAAGCGGGCGCCACAGACCTATGAGAAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGTTGGGCCCCACAGTaGGAAAGGGGTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISWAPQ*ERGPEP
Trigger: AGGCTCAGGACCCCTTTCCCACTGTGGGGCCCAACT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCGACAGGACTGAGTTaGGCCCCACAGTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIATGLS*APQWER
Trigger: CCTTTCCCACTGTGGGGCCCAACTCAGTCCTGTCGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ACTTTGATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTCATTTCTCGACAGACTaGATTTTTGCGATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: TLIHEANWDQPLSQQSMTHFSTD*IFAIPN
Trigger: GTTGGGGATCGCAAAAATCCAGTCTGTCGAGAAATG...AGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTATTATGCTGGCTCTGCTaGTACTGCGCCATCGTCACC +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVLCWLC*YCAIVT
Trigger: GGTGACGATGGCGCAGTACCAGCAGAGCCAGCATAA...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGCCAGCAGAGCTTTaGCCGCCCGGCACATCATGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWPAEL*PPGTSC
Trigger: ACATGATGTGCCGGGCGGCCAAAGCTCTGCTGGCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGACAGGCAGGTTGCCTaGGGTTGGAGGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHDRQVA*GWRLGN
Trigger: ATTTCCCAGCCTCCAACCCCAGGCAACCTGCCTGTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
3UTR CAA 72 bp TATTATACACGCTGGAGCAAACTAACGCAGAGTAACTaGGAGGCACACAGAAGAAACATGACGGGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: YYTRWSKLTQSN*EAHRRNMTGAD
Trigger: GTCTGCACCCGTCATGTTTCTTCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTGGAGAGGTGAGGTaGTGCATGTGGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAGEVR*CMWGER
Trigger: CCTTTCTCCCCACATGCATCACCTCACCTCTCCAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATCTGCTGAAAGTTACTaGTCCCAGGATGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRSAESY*SQDASG
Trigger: GCCAGATGCATCCTGGGATCAGTAACTTTCAGCAGA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTCGAATCCCCGGTGCTaGAGACTTCAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLSNPRC*RLQVGA
Trigger: AGCCCCCACCTGAAGTCTTCAGCACCGGGGATTCGA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGAATTGCTCCCAGTTaGCTGTGGAGTCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRIAPS*LWSLWA
Trigger: GGCCCACAGACTCCACAGTCAACTGGGAGCAATTCG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGCCACTGGCTCTCGTaGTTGATCCTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGHWLS*LILCSG
Trigger: ACCTGAGCAGAGGATCAATCACGAGAGCCAGTGGCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGGGACTGTGGGCATaGCCTTCTGCATCTTCATGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWGLWA*PSASSW
Trigger: CCATGAAGATGCAGAAGGTCATGCCCACAGTCCCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACACAGTACATCACAGATaGCAGATGCAACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYTVHHR*QMQPES
Trigger: ACTCTCTGGTTGCATCTGTCATCTGTGATGTACTGT...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCATAGCTGTCCTTTaGCTTGCTCTCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAIAVL*LALRLG
Trigger: TCCCAGCCTGAGAGCAAGTCAAAGGACAGCTATGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp GGTAGGAAGGGGCACCAGCAGCATGGTTATGTAAGTTTCAATGAGACTGAGCGTTTGTTTTTATTAACCTaGGCCAAACCTCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: GRKGHQQHGYVSFNETERLFLLT*AKPPIS
Trigger: GGAGATTGGAGGTTTGGCGCAGGTTAATAAAAACAA...ACGCTCAGTCTCATTGAAACTTACATAACCATGCTGCTGGTGCCCCTTCCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTGCGCTGCTGGAAGTaGCAACGTTCAGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLRCWK*QRSGWL
Trigger: CAACCAACCTGAACGTTGGCACTTCCAGCAGCGCAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTTCAGAGAGCTGGCTaGGCTGCTGGAAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHFQRAG*AAGSAN
Trigger: GTTGGCACTTCCAGCAGCGCAGCCAGCTCTCTGAAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGTCACCTGGAACCTCTaGCATCGAATTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVVTWNL*HRIAPS
Trigger: ACTGGGAGCAATTCGATGGCAGAGGTTCCAGGTGAC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCATCATGTCTGGCATaGCCATGCCCTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPSCLA*PCPAGM
Trigger: CATACCAGCAGGGCATGGGCATGCCAGACATGATGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGTTGTACATGTCCTaGATGCCGCTGTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWLYMS*MPLLGT
Trigger: GGTGCCCAACAGCGGCATGCAGGACATGTACAACCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGATCTCCTGCTGCTGGCTaGCATACTGCATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRSPAAG*HTACCT
Trigger: TGTACAACATGCAGTATGGCAGCCAGCAGCAGGAGA...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACTTGCTTGGAGACATaGGACTCTCCAGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTCLET*DSPGSA
Trigger: AGCGCTCCCTGGAGAGTCGCATGTCTCCAAGCAAGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAGCAGGAAGGGAGACTTaGTTGGAGACATGCGACTCT +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVAGRET*LETCDS
Trigger: AGAGTCGCATGTCTCCAAGCAAGTCTCCCTTCCTGC...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGTGGGCATGACCTTCTaGATCTTCATGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHVGMTF*IFMVGR
Trigger: CCTGCCCACCATGAAGATGCAGAAGGTCATGCCCAC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCAGCTAGGGCAGGGCTaGTCTTCCCCTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIQLGQG*SSPLTL
Trigger: TAGAGTCAGAGGGGAAGAGCAGCCCTGCCCTAGCTG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGAGGGATCTCCATCTTaGTCTCGAAGTGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIEGSPS*SRSESG
Trigger: TCCAGACTCACTTCGAGAGCAAGATGGAGATCCCTC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp GCCTGGAAGGAAGGTGGGATCTTCTGTCCTAAATTCTGTTCCACTGAGGAGTTCATACTTTTCTCTGGCTaGTCTTCAGAATCACCTTTG +
Preference number: 4 (lower is better)
Translates to: AWKEGGIFCPKFCSTEEFILFSG*SSESPL
Trigger: CAAAGGTGATTCTGAAGAGCAGCCAGAGAAAAGTAT...GAACTCCTCAGTGGAACAGAATTTAGGACAGAAGATCCCACCTTCCTTCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTCCAAAGGGAAACTTaGCGCTGTCGGTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHFQRET*RCRSGV
Trigger: GACCCCAGACCGACAGCGGCAAGTTTCCCTTTGGAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACCACTCATCTTTGCTaGAGGCCACCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTTHLC*RPPPCP
Trigger: AGGACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACCACCACTCATCTTTaGTGCAGGCCACCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTTTHL*CRPPPC
Trigger: ACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGTGGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AGTTTCTATTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTGGATCGGCAAGCAGATaGTCTCTGTGTAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SFYCTELWVTGCSLAFIIGSASR*SLCKQT
Trigger: TGTCTGCTTACACAGAGAGCATCTGCTTGCCGATCC...AATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAATAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCCAGCACAAGTCTCTaGGGCGACAGGACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSSTSL*GDRTEL
Trigger: CAACTCAGTCCTGTCGCCGCAGAGACTTGTGCTGGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACGGCTTTCAGTTTGTaGTTGGGGAGCAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITAFSL*LGSSPV
Trigger: GACCGGGCTGCTCCCCAACCACAAACTGAAAGCCGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGTTGTACTGGCTGTTaGGGTACCCTTCGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGCTGC*GTLRGS
Trigger: ACTCCCACGAAGGGTACCCCAACAGCCAGTACAACC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTCTTCATCACCATTaGGTCCATCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSLHHH*VHRAAL
Trigger: CAGGGCAGCCCGATGGACCCAATGGTGATGAAGAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGGGAGGTCATCGATaGAGCCAGACAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWGGHR*SQTGLV
Trigger: TACCAGACCTGTCTGGCTCCATCGATGACCTCCCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCCTCCAGGGATGCTaGAGAGGTGAGGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIALQGC*RGEVMH
Trigger: ATGCATCACCTCACCTCTCCAGCATCCCTGGAGGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTGAGGCGACATGGATaGTCCTGTCTGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVRRHG*SCLLRS
Trigger: GGACCTCAGCAGACAGGACCATCCATGTCGCCTCAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATGGGTGAGGCGACATaGATGGTCCTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHMGEAT*MVLSAE
Trigger: CTCAGCAGACAGGACCATCCATGTCGCCTCACCCAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTTGGGGTCCATACTaGCTCATCTGTGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPWGPY*LICGPY
Trigger: GTACGGCCCACAGATGAGCCAGTATGGACCCCAAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATAGCACCACATGGCTaGGCTGGCCCTTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIIAPHG*AGPCPC
Trigger: GCATGGACAAGGGCCAGCCCAGCCATGTGGTGCTAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGTGGGCCCATTCCTaGCCCTCCCTGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWWAHS*PSLLRH
Trigger: ATGTCTCAACAGGGAGGGCCAGGAATGGGCCCACCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTTCCGGTTCACAGTaGGCATTGGTGGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPSGSQ*ALVGPF
Trigger: GAATGGGCCCACCAATGCCCACTGTGAACCGGAAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCACCAGGCCACTCTaGTTCATGCCAGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHATRPL*FMPGKL
Trigger: CAGTTTTCCTGGCATGAACCAGAGTGGCCTGGTGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAATATTATACACGCTGGAGCAAACTAACGCAGAGTAACTTGGAGGCACACAGAGGGTGCTCATCAGGCTaGAGTTGTTGTTCATGGACT +
Preference number: 4 (lower is better)
Translates to: KYYTRWSKLTQSNLEAHRGCSSG*SCCSWT
Trigger: AGTCCATGAACAACAACTCCAGCCTGATGAGCACCC...TCTGTGTGCCTCCAAGTTACTCTGCGTTAGTTTGCTCCAGCGTGTATAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGCTGGCTGCGCTGCTaGAAGTGCCAACGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISWLRC*KCQRSG
Trigger: ACCTGAACGTTGGCACTTCCAGCAGCGCAGCCAGCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCTTTTTCAGAGAGCTaGCTGCGCTGCTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAFSES*LRCWKC
Trigger: GCACTTCCAGCAGCGCAGCCAGCTCTCTGAAAAAGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGAGGCTGGGGTTGGTaGCTTCAGGTCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRGWGW*LQVTWN
Trigger: GTTCCAGGTGACCTGAAGCCACCAACCCCAGCCTCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCATGCCCTGCTGGTATaGGGCGTTTGGAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHHALLV*GVWSHG
Trigger: TCCATGACTCCAAACGCCCCATACCAGCAGGGCATG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCCCATCATCTGAGGTaGGATTCCGTGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPHHLR*DSVWLH
Trigger: ATGCAGCCACACGGAATCCCACCTCAGATGATGGGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTTACTGGCCTGCTTTaGCGTCTCCTTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILTGLL*RLLGVH
Trigger: GTGGACCCCAAGGAGACGCCAAAGCAGGCCAGTAAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCACAGATGCAGCGCTTaGCCAGTGAGTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIHRCSA*PVSPAS
Trigger: ACTGGCAGGACTCACTGGCCAAGCGCTGCATCTGTG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTTCTCATAGGTCTGTaGCGCCCGCTTTCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILLIGL*RPLSLR
Trigger: CCGGAGAGAAAGCGGGCGCCACAGACCTATGAGAAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTACTCCTGACGACTAAATaGAGGCGTGGCCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVLLTTK*RRGQDQ
Trigger: CTGATCTTGGCCACGCCTCCATTTAGTCGTCAGGAG...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATTCATGAAGCAAACTGGGATCAGCCGCTCTCCCAACAGAGCATGACTTTATACTCGATAAAAGCGCCATaGACATTTCTCGACAGACTG +
Preference number: 4 (lower is better)
Translates to: IHEANWDQPLSQQSMTLYSIKAP*TFLDRL
Trigger: CAGTCTGTCGAGAAATGTCCATGGCGCTTTTATCGA...GTATAAAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTATGCTGGCTCTGCTaGTACTGCGCCATCGTCACC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLCWLC*YCAIVT
Trigger: GGTGACGATGGCGCAGTACCAGCAGAGCCAGCATAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTATGCATAAGGTTATGCTaGCTCTGCTGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVCIRLC*LCWYCA
Trigger: GGCGCAGTACCAGCAGAGCCAGCATAACCTTATGCA...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGAGCTGGGAGACATTaGGGAAGGGACAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRAGRH*GRDRQV
Trigger: AACCTGCCTGTCCCTTCCCCAATGTCTCCCAGCTCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGTCTTGGGCCAGCCTaGGCTGCTAATGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCLGPA*AANAVT
Trigger: AGTGACAGCATTAGCAGCCCAGGCTGGCCCAAGACA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
3UTR CAA 72 bp TCTCAAGTAGGAAACCCTGAAAGTCCCTTCTGGCCTTaGGGCATCATTACCAGGAAGCAGTTGTTACATCTT +
Preference number: 4 (lower is better)
Translates to: SQVGNPESPFWP*GIITRKQLLHL
Trigger: AAGATGTAACAACTGCTTCCTGGTAATGATGCCCAAAGGCCAGAAGGGACTTTCAGGGTTTCCTACTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
3UTR CAA 72 bp GCTGGAGGAAGCAGGAGTATAAAGAGAGTACTGGCTTaGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: AGGSRSIKRVLA*KQPVYDFAGSV
Trigger: TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTATACTCCTGCTTCCTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGTTGTCCGCCATGTTaGTCAAAGCAAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICCPPC*SKQGPA
Trigger: CGCTGGGCCTTGCTTTGATCAACATGGCGGACAACA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATGGGAACTGGATTCTaGCTGGCTTCCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHMGTGF*LASRWL
Trigger: CAACCACCTGGAAGCCAGTCAGAATCCAGTTCCCAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTGCCTGCTTTGTGCTaGGTTTGCAGCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLPALC*VCSSLH
Trigger: ATGCAGGCTGCTGCAAACTCAGCACAAAGCAGGCAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGAGCTGGACTTCTTTaGCTTGCTCTCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRAGLL*LALRLG
Trigger: TCCCAGCCTGAGAGCAAGTCAAAGAAGTCCAGCTCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092723.11
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGCCCCTCTCTTCCATaGACGTTAGGTAACGGTCGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSPSLP*TLGNGR
Trigger: TCGACCGTTACCTAACGTTCATGGAAGAGAGGGGCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCCGAATTGCTCCCAGTTaGCTGTGGAGTCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLRIAPS*LWSLWA
Trigger: GGCCCACAGACTCCACAGTCAACTGGGAGCAATTCG...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCGGAGTCATCTGTCCATaGGGGGTAGAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLGVICP*GVEAGV
Trigger: AACCCCAGCCTCTACCCCTCATGGACAGATGACTCC...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACGGGTCATGCACACTaGCTGTACTGCTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITGHAH*LYCFFR
Trigger: GCGGAAGAAGCAGTACAGTCAGTGTGCATGACCCGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCATAGCTGTCCTTTaGCTTGCTCTCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAIAVL*LALRLG
Trigger: TCCCAGCCTGAGAGCAAGTCAAAGGACAGCTATGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAACTGGTTTAGCTGCTaGTGTAGTGCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHNWFSC*CSAWWW
Trigger: CCACCACCACGCACTACAGCAGCAGCTAAACCAGTT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTACTGATCCCAGGATaGATCTGGCCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLLIPG*IWPPGD
Trigger: ATCTCCTGGGGGCCAGATGCATCCTGGGATCAGTAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTGTGGGCCGTACGTaGCACTTGAGTTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSVGRT*HLSYSA
Trigger: AGCAGAGTAACTCAAGTGGCACGTACGGCCCACAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGACTTCTTTGACTTaGTCTCAGGCTGGGACACGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWTSLT*SQAGTR
Trigger: GCGTGTCCCAGCCTGAGAGCAAGTCAAAGAAGTCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092723.11
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTGCGCTGCTGGAAGTaGCAACGTTCAGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILRCWK*QRSGWL
Trigger: CAACCAACCTGAACGTTGGCACTTCCAGCAGCGCAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTCTGCCATCGAATTaGTCCCAGTTGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPLPSN*SQLTVE
Trigger: CTCCACAGTCAACTGGGAGCAATTCGATGGCAGAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCATCATGTCTGGCATaGCCATGCCCTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPSCLA*PCPAGM
Trigger: CATACCAGCAGGGCATGGGCATGCCAGACATGATGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGTTCATAGGGCATCCTaGCCATCATGTCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHVHRAS*PSCLAC
Trigger: GCATGCCAGACATGATGGGCAGGATGCCCTATGAAC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGTACATGTCCTGCATaGCGCTGTTGGGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICTCPA*RCWAPV
Trigger: GACAGGTGCCCAACAGCGGCATGCAGGACATGTACA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGTTGTACATGTCCTaGATGCCGCTGTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWLYMS*MPLLGT
Trigger: GGTGCCCAACAGCGGCATGCAGGACATGTACAACCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTACTGGAGGCCCGTACATaGCATCCATATGACGTTTGT +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVLEART*HPYDVC
Trigger: ACAAACGTCATATGGATGGCATGTACGGGCCTCCAG...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACTTGCTTGGAGACATaGGACTCTCCAGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITCLET*DSPGSA
Trigger: AGCGCTCCCTGGAGAGTCGCATGTCTCCAAGCAAGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCAGGAAGGGAGACTTaGTTGGAGACATGCGACTCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAGRET*LETCDS
Trigger: AGAGTCGCATGTCTCCAAGCAAGTCTCCCTTCCTGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTGGGCATGACCTTCTaGATCTTCATGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVGMTF*IFMVGR
Trigger: CCTGCCCACCATGAAGATGCAGAAGGTCATGCCCAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTCCAAAGGGAAACTTaGCGCTGTCGGTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIFQRET*RCRSGV
Trigger: GACCCCAGACCGACAGCGGCAAGTTTCCCTTTGGAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCGGTGGCTTTTGGCCTaGTGGATTCCAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHRWLLA*WIPKGN
Trigger: GTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCACCG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACCACTCATCTTTGCTaGAGGCCACCCCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITTHLC*RPPPCP
Trigger: AGGACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACCACCACTCATCTTTaGTGCAGGCCACCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITTTHL*CRPPPC
Trigger: ACAAGGGGGTGGCCTGCAGCAAAGATGAGTGGTGGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCAGACAAGTCTAGCTaGCCGGAAATGTTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHADKSS*PEMFAN
Trigger: GTTGGCGAACATTTCCGGGCAGCTAGACTTGTCTGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCAATGCTTCCTTTCTaGACAGCTATTGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPMLPF*TAIALA
Trigger: GGCGAGGGCAATAGCTGTGCAGAAAGGAAGCATTGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TGCAAAGAACTCAGCACAACCCAGCAAGAAGCAAGGGGTTGTCTATCCAGTCTCTTATCAAGTTACCAATaGTTCCTTTCTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: CKELSTTQQEARGCLSSLLSSYQ*FLSAQL
Trigger: TAGCTGTGCAGAAAGGAAGCATTGGTAACTTGATAA...GAGACTGGATAGACAACCCCTTGCTTCTTGCTGGGTTGTGCTGAGTTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGTGGGGGCTGCATGTaGATAAGGTTATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGGGCM*IRLCWL
Trigger: GAGCCAGCATAACCTTATGCACATGCAGCCCCCACC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTGGAGGCTGGGAAATaGCCTGAGAGCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLEAGK*PESHSC
Trigger: ACAGCTATGGCTCTCAGGGCATTTCCCAGCCTCCAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTTTCAGTTTGTGGTTaGGGAGCAGCCCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILSVCG*GAARSP
Trigger: TGGAGACCGGGCTGCTCCCCAACCACAAACTGAAAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGCGGCTGCTGGAACTaGTTTAGCTGCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCGCWN*FSCCCS
Trigger: ACTACAGCAGCAGCTAAACCAGTTCCAGCAGCCGCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCTCTTCATCACCATTaGGTCCATCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISLHHH*VHRAAL
Trigger: CAGGGCAGCCCGATGGACCCAATGGTGATGAAGAGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGGGAGGTCATCGATaGAGCCAGACAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWGGHR*SQTGLV
Trigger: TACCAGACCTGTCTGGCTCCATCGATGACCTCCCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTGCTTCTGTTCCCGTaGGGAGGTCATCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILLLFP*GGHRWS
Trigger: GCTCCATCGATGACCTCCCCACGGGAACAGAAGCAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCGCCCTCCAGGGATGCTaGAGAGGTGAGGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLALQGC*RGEVMH
Trigger: ATGCATCACCTCACCTCTCCAGCATCCCTGGAGGGC...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGCTCAAGGCAGGATaGGAACTGGATTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWLKAG*ELDSDW
Trigger: CCAGTCAGAATCCAGTTCCCATCCTGCCTTGAGCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGTGGCATTGGTGACTaGCTCAAGGCAGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCGIGD*LKAGWE
Trigger: TTCCCATCCTGCCTTGAGCCAGTCACCAATGCCACA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATGGGTGAGGCGACATaGATGGTCCTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIMGEAT*MVLSAE
Trigger: CTCAGCAGACAGGACCATCCATGTCGCCTCACCCAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCACCAGGCCACTCTaGTTCATGCCAGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIATRPL*FMPGKL
Trigger: CAGTTTTCCTGGCATGAACCAGAGTGGCCTGGTGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAGCTGTTCACCATTGTaGGCGTCATGCTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSCSPL*ASCCRA
Trigger: AGCCCTACAGCATGACGCCCACAATGGTGAACAGCT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGCCAACGTTCAGGTTaGTTGCCAGCTCACGCCACT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICQRSG*LPAHAT
Trigger: AGTGGCGTGAGCTGGCAACCAACCTGAACGTTGGCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTTTTTCAGAGAGCTaGCTGCGCTGCTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAFSES*LRCWKC
Trigger: GCACTTCCAGCAGCGCAGCCAGCTCTCTGAAAAAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGCGTTTGGAGTCATaGAGTTCCGTTTTGGGTACG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGRLES*SSVLGT
Trigger: CGTACCCAAAACGGAACTCCATGACTCCAAACGCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCATGCCCTGCTGGTATaGGGCGTTTGGAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIHALLV*GVWSHG
Trigger: TCCATGACTCCAAACGCCCCATACCAGCAGGGCATG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCCCATCATCTGAGGTaGGATTCCGTGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPHHLR*DSVWLH
Trigger: ATGCAGCCACACGGAATCCCACCTCAGATGATGGGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGAAGGGAGACTTGCTTaGAGACATGCGACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHEGRLA*RHATLQ
Trigger: CTGGAGAGTCGCATGTCTCCAAGCAAGTCTCCCTTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTTTCTTCTTACCCGTaGAGCTTAGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLSSYP*SLEAEV
Trigger: CACCTCCGCCTCTAAGCTCCACGGGTAAGAAGAAAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGTTCCGGTGGCTTTTaGCCTGCTGGATTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCSGGF*PAGFQR
Trigger: CCTTTGGAATCCAGCAGGCCAAAAGCCACCGGAACA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTCCTGACGACTAAATaGAGGCGTGGCCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLLTTK*RRGQDQ
Trigger: CTGATCTTGGCCACGCCTCCATTTAGTCGTCAGGAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCAGTGTGTCCCCCTaGGCAAGGTTCGATAAAAGC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIASVSP*ARFDKS
Trigger: GCTTTTATCGAACCTTGCCCAGGGGGACACACTGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTATGCTGGCTCTGCTaGTACTGCGCCATCGTCACC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILCWLC*YCAIVT
Trigger: GGTGACGATGGCGCAGTACCAGCAGAGCCAGCATAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGCATAAGGTTATGCTaGCTCTGCTGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCIRLC*LCWYCA
Trigger: GGCGCAGTACCAGCAGAGCCAGCATAACCTTATGCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGAAAGGAGGAGATGCTaGCAGAGCTGGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHERRRC*QSWETL
Trigger: CAATGTCTCCCAGCTCTGCCAGCATCTCCTCCTTTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATGGGAACTGGATTCTaGCTGGCTTCCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIMGTGF*LASRWL
Trigger: CAACCACCTGGAAGCCAGTCAGAATCCAGTTCCCAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTGCTGAAAGTTACTaGTCCCAGGATGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSAESY*SQDASG
Trigger: GCCAGATGCATCCTGGGATCAGTAACTTTCAGCAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCGTACGTGCCACTTaGGTTACTCTGCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAVRAT*VTLLKV
Trigger: AACTTTCAGCAGAGTAACTCAAGTGGCACGTACGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGCCCCTCTCTTCCATaGACGTTAGGTAACGGTCGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISPSLP*TLGNGR
Trigger: TCGACCGTTACCTAACGTTCATGGAAGAGAGGGGCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTACTGATCCCAGGATaGATCTGGCCCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILLIPG*IWPPGD
Trigger: ATCTCCTGGGGGCCAGATGCATCCTGGGATCAGTAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCTGTGGGCCGTACGTaGCACTTGAGTTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISVGRT*HLSYSA
Trigger: AGCAGAGTAACTCAAGTGGCACGTACGGCCCACAGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCTGGCCCTTGTCCATaGATCTGGTTGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAGPCP*IWLLAL
Trigger: CAATGCCAACAACCAGATGCATGGACAAGGGCCAGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACAACGTTCAGGTTGGTTaGCAGCTCACGCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHNVQVG*QLTPLL
Trigger: AAGAAGTGGCGTGAGCTGGCAACCAACCTGAACGTT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTTTCAGAGAGCTGGCTaGGCTGCTGGAAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLFQRAG*AAGSAN
Trigger: GTTGGCACTTCCAGCAGCGCAGCCAGCTCTCTGAAA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTCTGCCATCGAATTaGTCCCAGTTGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPLPSN*SQLTVE
Trigger: CTCCACAGTCAACTGGGAGCAATTCGATGGCAGAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTCACCTGGAACCTCTaGCATCGAATTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVTWNL*HRIAPS
Trigger: ACTGGGAGCAATTCGATGGCAGAGGTTCCAGGTGAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTGGAGGCCCGTACATaGCATCCATATGACGTTTGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLEART*HPYDVC
Trigger: ACAAACGTCATATGGATGGCATGTACGGGCCTCCAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGCTGGCTGCCATACTaGATGTTGTACATGTCTCCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCWLPY*MLYMSP
Trigger: GGGAGACATGTACAACATGCAGTATGGCAGCCAGCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCTCCTGCTGCTGGCTaGCATACTGCATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSPAAG*HTACCT
Trigger: TGTACAACATGCAGTATGGCAGCCAGCAGCAGGAGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCAGGAAGGGAGACTTaGTTGGAGACATGCGACTCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAGRET*LETCDS
Trigger: AGAGTCGCATGTCTCCAAGCAAGTCTCCCTTCCTGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGAGGGATCTCCATCTTaGTCTCGAAGTGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHEGSPS*SRSESG
Trigger: TCCAGACTCACTTCGAGAGCAAGATGGAGATCCCTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGGTGGCTTTTGGCCTaGTGGATTCCAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRWLLA*WIPKGN
Trigger: GTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCACCG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGTTCGACACACAGATaGAGCGCTTGGCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICSTHR*SAWPVS
Trigger: ACTCACTGGCCAAGCGCTGCATCTGTGTGTCGAACA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCAGACAAGTCTAGCTaGCCGGAAATGTTCGCCAAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIADKSS*PEMFAN
Trigger: GTTGGCGAACATTTCCGGGCAGCTAGACTTGTCTGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCAATGCTTCCTTTCTaGACAGCTATTGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPMLPF*TAIALA
Trigger: GGCGAGGGCAATAGCTGTGCAGAAAGGAAGCATTGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTAATGTGCATAAGGTTATaGTGGCTCTGCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVMCIRL*WLCWYC
Trigger: GCAGTACCAGCAGAGCCAGCATAACCTTATGCACAT...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCATGAAAGGAGGAGATaGTGGCAGAGCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIHERRR*WQSWET
Trigger: TGTCTCCCAGCTCTGCCAGCATCTCCTCCTTTCATG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTTGCTTCTGTTCCCGTaGGGAGGTCATCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLLLLFP*GGHRWS
Trigger: GCTCCATCGATGACCTCCCCACGGGAACAGAAGCAA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGGCATCTGGCTACCTaGAATACTCGCAGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRHLAT*NTRRGD
Trigger: ATCTCCCCTGCGAGTATTCCAGGTAGCCAGATGCCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGAACTGGATTCTGACTaGCTTCCAGGTGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIELDSD*LPGGCG
Trigger: TCCGCAACCACCTGGAAGCCAGTCAGAATCCAGTTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGCTCAAGGCAGGATaGGAACTGGATTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWLKAG*ELDSDW
Trigger: CCAGTCAGAATCCAGTTCCCATCCTGCCTTGAGCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCATGGGTGAGGCGACATaGATGGTCCTGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLMGEAT*MVLSAE
Trigger: CTCAGCAGACAGGACCATCCATGTCGCCTCACCCAT...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTACCCCGCTATATGTTaGGGTTCTGGAGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHYPAIC*GSGVVA
Trigger: GGCAACTACTCCAGAACCCCAACATATAGCGGGGTA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCGCTGTAGCTTGCACTaGGTACCCCGCTATATGTTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIRCSLH*VPRYML
Trigger: CAACATATAGCGGGGTACCCAGTGCAAGCTACAGCG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCTTGTCCATGCATCTaGTTGTTGGCATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPCPCI*LLALMP
Trigger: GGGCATCAATGCCAACAACCAGATGCATGGACAAGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGTGCTCATCAGGCTaGAGTTGTTGTTCATGGACT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGCSSG*SCCSWT
Trigger: AGTCCATGAACAACAACTCCAGCCTGATGAGCACCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGCTGTTCACCATTGTaGGCGTCATGCTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISCSPL*ASCCRA
Trigger: AGCCCTACAGCATGACGCCCACAATGGTGAACAGCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTGCACAGAGCTTTGGGTGACGGGGTGCAGTTTAGCTTTTATCATTCTGTGAAGACAATTTGGACTCACTaGGAGACATCATATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHRALGDGVQFSFYHSVKTIWTH*ETSYLQ
Trigger: TTGCAGATATGATGTCTCCCAGTGAGTCCAAATTGT...CTTCACAGAATGATAAAAGCTAAACTGCACCCCGTCACCCAAAGCTCTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGCTTCAGGTCACCTaGAACCTCTGCCATCGAATT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWLQVT*NLCHRI
Trigger: AATTCGATGGCAGAGGTTCCAGGTGACCTGAAGCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGCGTTTGGAGTCATaGAGTTCCGTTTTGGGTACG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGRLES*SSVLGT
Trigger: CGTACCCAAAACGGAACTCCATGACTCCAAACGCCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTGGTATGGGGCGTTTaGAGTCATGGAGTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLVWGV*SHGVPF
Trigger: AAACGGAACTCCATGACTCCAAACGCCCCATACCAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCCCCCATCATCTGAGGTaGGATTCCGTGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLPHHLR*DSVWLH
Trigger: ATGCAGCCACACGGAATCCCACCTCAGATGATGGGG...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGAAGGGAGACTTGCTTaGAGACATGCGACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIEGRLA*RHATLQ
Trigger: CTGGAGAGTCGCATGTCTCCAAGCAAGTCTCCCTTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGTTCCGGTGGCTTTTaGCCTGCTGGATTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICSGGF*PAGFQR
Trigger: CCTTTGGAATCCAGCAGGCCAAAAGCCACCGGAACA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAGCCTGATGTTCCGGTaGCTTTTGGCCTGCTGGATT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISLMFR*LLACWI
Trigger: AATCCAGCAGGCCAAAAGCCACCGGAACATCAGGCT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGCATAAGGTTATGCTaGCTCTGCTGGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICIRLC*LCWYCA
Trigger: GGCGCAGTACCAGCAGAGCCAGCATAACCTTATGCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGAAAGGAGGAGATGCTaGCAGAGCTGGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIERRRC*QSWETL
Trigger: CAATGTCTCCCAGCTCTGCCAGCATCTCCTCCTTTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCCATCCCATACAACTaGGGTCTCTTCATCACCATT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPIPYN*GLFITI
Trigger: AATGGTGATGAAGAGACCTCAGTTGTATGGGATGGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCAGCCCCTCTCTTCCATaGACGTTAGGTAACGGTCGA +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLSPSLP*TLGNGR
Trigger: TCGACCGTTACCTAACGTTCATGGAAGAGAGGGGCT...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGTTGTCCTGGATACTaGGTTTACACAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHCCPGY*VYTGSP
Trigger: TGGAGACCCTGTGTAAACTCAGTATCCAGGACAACA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGAAATGGTCTGTTCTaGATCCCAGCTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGNGLF*IPAEGI
Trigger: AATGCCTTCAGCTGGGATGCAGAACAGACCATTTCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCCAGGAAAACTGCCTTaGCTGCTTTGTGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHPGKLP*LLCAEF
Trigger: AAACTCAGCACAAAGCAGGCAAGGCAGTTTTCCTGG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTAACGTTCAGGTTGGTTaGCAGCTCACGCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANINVQVG*QLTPLL
Trigger: AAGAAGTGGCGTGAGCTGGCAACCAACCTGAACGTT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTGGAGGCCCGTACATaGCATCCATATGACGTTTGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILEART*HPYDVC
Trigger: ACAAACGTCATATGGATGGCATGTACGGGCCTCCAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGCTGGCTGCCATACTaGATGTTGTACATGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANICWLPY*MLYMSP
Trigger: GGGAGACATGTACAACATGCAGTATGGCAGCCAGCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCTCCTGCTGCTGGCTaGCATACTGCATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISPAAG*HTACCT
Trigger: TGTACAACATGCAGTATGGCAGCCAGCAGCAGGAGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTATACATCTCCTGCTaGTGGCTGCCATACTGCATG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLYISC*WLPYCM
Trigger: CATGCAGTATGGCAGCCAGCAGCAGGAGATGTATAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGAGGGATCTCCATCTTaGTCTCGAAGTGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIEGSPS*SRSESG
Trigger: TCCAGACTCACTTCGAGAGCAAGATGGAGATCCCTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGATCGGCAAGCAGATaGTCTCTGTGTAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGSASR*SLCKQT
Trigger: TGTCTGCTTACACAGAGAGCATCTGCTTGCCGATCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACATGTGCATAAGGTTATaGTGGCTCTGCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHMCIRL*WLCWYC
Trigger: GCAGTACCAGCAGAGCCAGCATAACCTTATGCACAT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTTGGAGGCTGGGAAATaGCCTGAGAGCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLLEAGK*PESHSC
Trigger: ACAGCTATGGCTCTCAGGGCATTTCCCAGCCTCCAA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCCATGAAAGGAGGAGATaGTGGCAGAGCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLHERRR*WQSWET
Trigger: TGTCTCCCAGCTCTGCCAGCATCTCCTCCTTTCATG...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCTTGTCCATGCATCTaGTTGTTGGCATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPCPCI*LLALMP
Trigger: GGGCATCAATGCCAACAACCAGATGCATGGACAAGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGTGCTCATCAGGCTaGAGTTGTTGTTCATGGACT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGCSSG*SCCSWT
Trigger: AGTCCATGAACAACAACTCCAGCCTGATGAGCACCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCAGCTGTTCACCATTGTaGGCGTCATGCTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLSCSPL*ASCCRA
Trigger: AGCCCTACAGCATGACGCCCACAATGGTGAACAGCT...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGAGGCACAGACAATTTaGACTCACTGGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHEAQTI*THWETS
Trigger: TGATGTCTCCCAGTGAGTCCAAATTGTCTGTGCCTC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGCTTCAGGTCACCTaGAACCTCTGCCATCGAATT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWLQVT*NLCHRI
Trigger: AATTCGATGGCAGAGGTTCCAGGTGACCTGAAGCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTCTTCCGCTTTGCATaGGAGTCATCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHFFRFA*ESSVHE
Trigger: CTCATGGACAGATGACTCCCATGCAAAGCGGAAGAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGCCTTCGGTCATAACTaGTTCCATAGGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHAFGHN*FHRETA
Trigger: AGCAGTTTCCCTATGGAACCAGTTATGACCGAAGGC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTACATCTCCTGCTGCTaGCTGCCATACTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIYISCC*LPYCML
Trigger: CAACATGCAGTATGGCAGCCAGCAGCAGGAGATGTA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCAAGAGCCTTTTGGCTaGGGTCACCCACTTCATATT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHQEPFG*GHPLHI
Trigger: AATATGAAGTGGGTGACCCCAGCCAAAAGGCTCTTG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCATCTTCCAGGGACTaGCTGTCATCTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSSSRD*LSSFFP
Trigger: AGGGAAGAAAGATGACAGCCAGTCCCTGGAAGATGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTGGCTTTTGGCCTGCTaGATTCCAAAGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHWLLAC*IPKGNL
Trigger: CAAGTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAAGAGAGTACTGGCTTTGAAACAGCCTGTGTATGATTTTGCGGGTTCTGTATCCACGTTGTTGTCCTaGATACTGAGTTTACACAGG +
Preference number: 4 (lower is better)
Translates to: IKRVLALKQPVYDFAGSVSTLLS*ILSLHR
Trigger: CCTGTGTAAACTCAGTATCCAGGACAACAACGTGGA...TACAGAACCCGCAAAATCATACACAGGCTGTTTCAAAGCCAGTACTCTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCCATCCCATACAACTaGGGTCTCTTCATCACCATT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPIPYN*GLFITI
Trigger: AATGGTGATGAAGAGACCTCAGTTGTATGGGATGGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTTGAGTTACTCTGCTaGAAGTTACTGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLELLC*KLLIPG
Trigger: TCCTGGGATCAGTAACTTTCAGCAGAGTAACTCAAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCTTTTCTCATTCCACTaGAAGGGTCCTTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLFSFH*KGPCWV
Trigger: AACCCAACAAGGACCCTTTCAGTGGAATGAGAAAAG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGTCATCTTTCTTCCCTaGACGGTGATCAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIVIFLP*TVIKSL
Trigger: AAGGCTCTTGATCACCGTTCAGGGAAGAAAGATGAC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACAGTACATCACAGATaGCAGATGCAACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTVHHR*QMQPES
Trigger: ACTCTCTGGTTGCATCTGTCATCTGTGATGTACTGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACGGGAGACATCATATCTaGAAGACCCATAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHGRHHI*KTHRCC
Trigger: ACAGCATCTATGGGTCTTGCAGATATGATGTCTCCC...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTGCTGGCTGCCATACTaGATGTTGTACATGTCTCCC +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLCWLPY*MLYMSP
Trigger: GGGAGACATGTACAACATGCAGTATGGCAGCCAGCA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTATACATCTCCTGCTaGTGGCTGCCATACTGCATG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILYISC*WLPYCM
Trigger: CATGCAGTATGGCAGCCAGCAGCAGGAGATGTATAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCCATCATATCATCTGTaGGGTTCATGCCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIPSYHL*GSCLGK
Trigger: CTTACCCAGGCATGAACCGCACAGATGATATGATGG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGAGGCACAGACAATTTaGACTCACTGGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIEAQTI*THWETS
Trigger: TGATGTCTCCCAGTGAGTCCAAATTGTCTGTGCCTC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGCCTTCGGTCATAACTaGTTCCATAGGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIAFGHN*FHRETA
Trigger: AGCAGTTTCCCTATGGAACCAGTTATGACCGAAGGC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCAAGAGCCTTTTGGCTaGGGTCACCCACTTCATATT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIQEPFG*GHPLHI
Trigger: AATATGAAGTGGGTGACCCCAGCCAAAAGGCTCTTG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCATCTTCCAGGGACTaGCTGTCATCTTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISSSRD*LSSFFP
Trigger: AGGGAAGAAAGATGACAGCCAGTCCCTGGAAGATGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTGGCTTTTGGCCTGCTaGATTCCAAAGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIWLLAC*IPKGNL
Trigger: CAAGTTTCCCTTTGGAATCCAGCAGGCCAAAAGCCA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCCACGTTGTTGTCCTaGATACTGAGTTTACACAGG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSTLLS*ILSLHR
Trigger: CCTGTGTAAACTCAGTATCCAGGACAACAACGTGGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACCATTTCTCGACAGACTaGATTTTTGCGATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHHFSTD*IFAIPN
Trigger: GTTGGGGATCGCAAAAATCCAGTCTGTCGAGAAATG...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTCGATAAAAGCGCCATaGACATTTCTCGACAGACTG +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHSIKAP*TFLDRL
Trigger: CAGTCTGTCGAGAAATGTCCATGGCGCTTTTATCGA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTTGAGTTACTCTGCTaGAAGTTACTGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILELLC*KLLIPG
Trigger: TCCTGGGATCAGTAACTTTCAGCAGAGTAACTCAAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCTTTTCTCATTCCACTaGAAGGGTCCTTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILFSFH*KGPCWV
Trigger: AACCCAACAAGGACCCTTTCAGTGGAATGAGAAAAG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR TCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACAGTACATCACAGATaGCAGATGCAACCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITVHHR*QMQPES
Trigger: ACTCTCTGGTTGCATCTGTCATCTGTGATGTACTGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTGGGAGACATCATATCTaGAAGACCCATAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIGRHHI*KTHRCC
Trigger: ACAGCATCTATGGGTCTTGCAGATATGATGTCTCCC...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTTATACATCTCCTGCTaGTGGCTGCCATACTGCATG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLLYISC*WLPYCM
Trigger: CATGCAGTATGGCAGCCAGCAGCAGGAGATGTATAA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATCACAGATGACAGATaGAACCAGAGAGTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIITDDR*NQRVQD
Trigger: GTCCTGAACTCTCTGGTTGCATCTGTCATCTGTGAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTCATTTCTCGACAGACTaGATTTTTGCGATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIHFSTD*IFAIPN
Trigger: GTTGGGGATCGCAAAAATCCAGTCTGTCGAGAAATG...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTCGATAAAAGCGCCATaGACATTTCTCGACAGACTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANISIKAP*TFLDRL
Trigger: CAGTCTGTCGAGAAATGTCCATGGCGCTTTTATCGA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTGTTTTTATTAACCTaGGCCAAACCTCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLFLLT*AKPPIS
Trigger: GGAGATTGGAGGTTTGGCGCAGGTTAATAAAAACAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACACAATTTGGACTCACTaGGAGACATCATATCTGCAA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHTIWTH*ETSYLQ
Trigger: TTGCAGATATGATGTCTCCCAGTGAGTCCAAATTGT...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCTCCACGTTGTTGTCCTaGATACTGAGTTTACACAGG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLSTLLS*ILSLHR
Trigger: CCTGTGTAAACTCAGTATCCAGGACAACAACGTGGA...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTCTTCTTTACCATCTaGTTTAAGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHFFFTI*FKRHRQ
Trigger: TTGTCTGTGCCTCTTAAAGCAGATGGTAAAGAAGAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTGTTTTTATTAACCTaGGCCAAACCTCCAATCTCC +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILFLLT*AKPPIS
Trigger: GGAGATTGGAGGTTTGGCGCAGGTTAATAAAAACAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTATACTTTTCTCTGGCTaGTCTTCAGAATCACCTTTG +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIILFSG*SSESPL
Trigger: CAAAGGTGATTCTGAAGAGCAGCCAGAGAAAAGTAT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp ATAAACGAGAACAGAAAACAGCCAGTTATATGTGACCCTCTAATGTTCACTCACTTATCAAGTTACCAATaGTTCCTTTCTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: INENRKQPVICDPLMFTHLSSYQ*FLSAQL
Trigger: TAGCTGTGCAGAAAGGAAGCATTGGTAACTTGATAA...GTGAGTGAACATTAGAGGGTCACATATAACTGGCTGTTTTCTGTTCTCGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTACAATTTGGACTCACTaGGAGACATCATATCTGCAA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANITIWTH*ETSYLQ
Trigger: TTGCAGATATGATGTCTCCCAGTGAGTCCAAATTGT...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTCTTCTTTACCATCTaGTTTAAGAGGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANIFFFTI*FKRHRQ
Trigger: TTGTCTGTGCCTCTTAAAGCAGATGGTAAAGAAGAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR GCA 90 bp TTTATCGCACCATTCCAAAATACTAAACTTTCTTCGCACCTTTATTTCTCTCTCATACTTTTCTCTGGCTaGTCTTCAGAATCACCTTTG +
Preference number: 4 (lower is better)
Translates to: FIAPFQNTKLSSHLYFSLILFSG*SSESPL
Trigger: CAAAGGTGATTCTGAAGAGCAGCCAGAGAAAAGTAT...GAGAGAGAAATAAAGGTGCGAAGAAAGTTTAGTATTTTGGAATGGTGCGATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000115797.9
ENSMUST00000115799.2
CDS-3UTR GCA 90 bp AAAGAAACAGAAAACCGCCAGAGGATGTACTTATACACACAGACAGCAAATATTTTATCAAGTTACCAATaGTTCCTTTCTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: KETENRQRMYLYTQTANILSSYQ*FLSAQL
Trigger: TAGCTGTGCAGAAAGGAAGCATTGGTAACTTGATAA...AATATTTGCTGTCTGTGTGTATAAGTACATCCTCTGGCGGTTTTCTGTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS GCA 90 bp GCTCCCATAGCCGCCGCCACCGCCTCCTCCTGCTGCTGCTGCTGCTaGCGCCGCCGCCGCGGCCGCCGCCGCCACAGCTCCGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: APIAAATASSCCCCC*RRRRGRRRHSSGSC
Trigger: GCAGGAGCCGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGGAGGCGGTGGCGGCGGCTATGGGAGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp TACTGGGCGCCTAGGTCCTTGCCCAAGCCCATGCCCGCGGCCGCCTaGTGGCCACCCGCCGCCGCCCCCGCCGCCGCCTGGGACTGGGGC +
Preference number: 5 (lower is better)
Translates to: YWAPRSLPKPMPAAA*WPPAAAPAAAWDWG
Trigger: GCCCCAGTCCCAGGCGGCGGCGGGGGCGGCGGCGGGTGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACCTAGGCGCCCAGTA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp CCGCCCAGGCCGGGCTGGCAGCGGCGTACTGGGCGCCTAGGTCCTTaGCCAAGCCCATGCCCGCGGCCGCCTGCTGGCCACCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PPRPGWQRRTGRLGP*PSPCPRPPAGHPPP
Trigger: CGGCGGCGGGTGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACCTAGGCGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp GCGCGGGCTGCTGCTGCGCGCCCAGGCCCGGGTGCTCATAGCGGCTaGCCGCCGGCTCCCCCATCTTGGGCGGCGCGTCGTCCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: ARAAAARPGPGAHSG*PPAPPSWAARRPRR
Trigger: GCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCAGCCGCTATGAGCACCCGGGCCTGGGCGCGCAGCAGCAGCCCGCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS TCA 90 bp CGACGGCGGCGGAGGAGGACAGCGCGGCGGCGCTTCCACCCTCCTTaGGAGCCGCCTCGGAGCGGCCGCTCTGCGCGCTGTTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RRRRRRTARRRFHPP*EPPRSGRSARCWSW
Trigger: CCAGCTCCAACAGCGCGCAGAGCGGCCGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAGCGCCGCCGCGCTGTCCTCCTCCGCCGCCGTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092723.11
ENSMUST00000232180.2
CDS GCA 90 bp CCGCCCGCACCGCCCAGGCTGTTGTTGGCAGTGGGATGCTGCTGCTaGGGCGGTGGCGGCGGCTGCTGCTGCTGTGGCTGCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPAPPRLLLAVGCCC*GGGGGCCCCGCGGC
Trigger: GCAGCCGCCGCAGCCACAGCAGCAGCAGCCGCCGCCACCGCCGCAGCAGCAGCATCCCACTGCCAACAACAGCCTGGGCGGTGCGGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS CCA 90 bp CTCCTTTGTTGCGCGGCCGCCCAGGCCGGGCTGGCAGCGGCGTACTaGGCGCCTAGGTCCTTGCCCAAGCCCATGCCCGCGGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLCCAAAQAGLAAAY*APRSLPKPMPAAAC
Trigger: GCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACCTAGGCGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp GGTCCATCGGGCTGCCCTGGGATCTGCCCATGGTCGGTCCGGGGGTaGCGGGGCTCATCGCCGGGTGACTCCTTTGTTGCGCGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: GPSGCPGICPWSVRG*RGSSPGDSFVARPP
Trigger: GGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCATGGGCAGATCCCAGGGCAGCCCGATGGACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp TCCTGCTGTGGCTGGTACCTCTGCTGGGACTGCGCCGCCGCCGGCTaGAGGTACTGTGCCTGGGGCGGGAGGTGCGAGGGCTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: SCCGWYLCWDCAAAG*RYCAWGGRCEGCGC
Trigger: GCAGCCGCAGCCCTCGCACCTCCCGCCCCAGGCACAGTACCTGCAGCCGGCGGCGGCGCAGTCCCAGCAGAGGTACCAGCCACAGCAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS CCA 90 bp CCAGGCCCGGGTGCTCATAGCGGCTGCCCGCCGGCTCCCCCATCTTaGGCGGCGCGTCGTCCTCGTCGCCCGGTTTGCTCAGCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PGPGAHSGCPPAPPS*AARRPRRPVCSAEA
Trigger: AGCCTCTGCTGAGCAAACCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCAGCCGCTATGAGCACCCGGGCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp CCGGCTCCCCCATCTTGGGCGGCGCGTCGTCCTCGTCGCCCGGTTTaGTCAGCAGAGGCTGGCCCTGCGGGTCAGCCTGATTGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: PAPPSWAARRPRRPV*SAEAGPAGQPDCPR
Trigger: TCGCGGGCAATCAGGCTGACCCGCAGGGCCAGCCTCTGCTGAGCAAACCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS CCA 90 bp CGCCAACGGCTTTCAGTTTGTGGTTGGGGAGCAGCCCGGTCTCCATaGTCGAGCCGGGGCCCGCCGAGGAGGAAGAGGCCGCGACGGCGG +
Preference number: 5 (lower is better)
Translates to: RQRLSVCGWGAARSP*SSRGPPRRKRPRRR
Trigger: CCGCCGTCGCGGCCTCTTCCTCCTCGGCGGGCCCCGGCTCGACCATGGAGACCGGGCTGCTCCCCAACCACAAACTGAAAGCCGTTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092723.11
ENSMUST00000232180.2
CDS CCA 90 bp TCATCGCCGGGTGACTCCTTTGTTGCGCGGCCGCCCAGGCCGGGCTaGCAGCGGCGTACTGGGCGCCTAGGTCCTTGCCCAAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: SSPGDSFVARPPRPG*QRRTGRLGPCPSPC
Trigger: GCATGGGCTTGGGCAAGGACCTAGGCGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp CTGGTACCTCTGCTGGGACTGCGCCGCCGCCGGCTGCAGGTACTGTaGCTGGGGCGGGAGGTGCGAGGGCTGCGGCTGCTGGTTGTAGTA +
Preference number: 5 (lower is better)
Translates to: LVPLLGLRRRRLQVL*LGREVRGLRLLVVV
Trigger: TACTACAACCAGCAGCCGCAGCCCTCGCACCTCCCGCCCCAGGCACAGTACCTGCAGCCGGCGGCGGCGCAGTCCCAGCAGAGGTACCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS CCA 90 bp GAGGCTGGCCCTGCGGGTCAGCCTGATTGCCCGCGACACTGTCCTTaGCGCCTCCATGTTGCGGCTGCTCCATGTCCGGGCCGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: EAGPAGQPDCPRHCP*RLHVAAAPCPGRAE
Trigger: CTCAGCCCGGCCCGGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGTCGCGGGCAATCAGGCTGACCCGCAGGGCCAGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS CCA 90 bp CGGTGGCATCTGCTGCTGCGGGTACTGCAAGCCTCCCAGGGCCCCTaGAGCCCGGCCCTGCATGCCAAGGGGATACCGCTGTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: RWHLLLRVLQASQGP*SPALHAKGIPLCTW
Trigger: CCAGGTGCACAGCGGTATCCCCTTGGCATGCAGGGCCGGGCTCCAGGGGCCCTGGGAGGCTTGCAGTACCCGCAGCAGCAGATGCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS TCA 90 bp TCGTCGCCCGGTTTGCTCAGCAGAGGCTGGCCCTGCGGGTCAGCCTaGTTGCCCGCGACACTGTCCTTGGCGCCTCCATGTTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSPGLLSRGWPCGSA*LPATLSLAPPCCGC
Trigger: GCAGCCGCAACATGGAGGCGCCAAGGACAGTGTCGCGGGCAATCAGGCTGACCCGCAGGGCCAGCCTCTGCTGAGCAAACCGGGCGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS GCA 90 bp CGCCCGGTTTGCTCAGCAGAGGCTGGCCCTGCGGGTCAGCCTGATTaGCCGCGACACTGTCCTTGGCGCCTCCATGTTGCGGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: RPVCSAEAGPAGQPD*PRHCPWRLHVAAAP
Trigger: TGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGTCGCGGGCAATCAGGCTGACCCGCAGGGCCAGCCTCTGCTGAGCAAACCGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS CCA 90 bp CCGCGCCGGGCCGGCTGTAGCCCGGATAATGGTTGTACTGGCTGTTaGGGTACCCTTCGTGGGAGTTCTGCAGGGGGTCCATGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PRRAGCSPDNGCTGC*GTLRGSSAGGPCCW
Trigger: CCAGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTACAACCATTATCCGGGCTACAGCCGGCCCGGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000232180.2
CDS CCA 90 bp GCCTTGCTGGCAGTAGCCACTCACAGCTTGCTGTCCGTACTGCGGTaGCATCTGCTGCTGCGGGTACTGCAAGCCTCCCAGGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ALLAVATHSLLSVLR*HLLLRVLQASQGPW
Trigger: CCAGGGGCCCTGGGAGGCTTGCAGTACCCGCAGCAGCAGATGCCACCGCAGTACGGACAGCAAGCTGTGAGTGGCTACTGCCAGCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS CCA 90 bp TGCCTGGGGCGGGAGGTGCGAGGGCTGCGGCTGCTGGTTGTAGTATaGCTGCTGGCCTTGCTGGCAGTAGCCACTCACAGCTTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: CLGREVRGLRLLVVV*LLALLAVATHSLLS
Trigger: GGACAGCAAGCTGTGAGTGGCTACTGCCAGCAAGGCCAGCAGCCATACTACAACCAGCAGCCGCAGCCCTCGCACCTCCCGCCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS GCA 90 bp ACCGCTGTGCACCTGGGGGACCGTAGGAGCCTCCTGGGTATGGGCTaGTCTGCTGTGGCTGGGAGTGGGGGTGAGTACCCATCCCATACA +
Preference number: 5 (lower is better)
Translates to: TAVHLGDRRSLLGMG*SAVAGSGGEYPSHT
Trigger: TGTATGGGATGGGTACTCACCCCCACTCCCAGCCACAGCAGAGCAGCCCATACCCAGGAGGCTCCTACGGTCCCCCAGGTGCACAGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS GCA 90 bp CGTCCCAGGGGCATAGCACCACATGGCTGGGCTGGCCCTTGTCCATaGATCTGGTTGTTGGCATTGATGCCCATACCGGGCCCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: RPRGIAPHGWAGPCP*IWLLALMPIPGPGP
Trigger: CGGCCCAGGGCCCGGTATGGGCATCAATGCCAACAACCAGATGCATGGACAAGGGCCAGCCCAGCCATGTGGTGCTATGCCCCTGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS CCA 90 bp CACAGCTGCGGCAGCTTCCTGGGCCTTCCGGTTCACAGTGGGCATTaGTGGGCCCATTCCTGGCCCTCCCTGTTGAGACATGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HSCGSFLGLPVHSGH*WAHSWPSLLRHARR
Trigger: TCTCCTGGCATGTCTCAACAGGGAGGGCCAGGAATGGGCCCACCAATGCCCACTGTGAACCGGAAGGCCCAGGAAGCTGCCGCAGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS CCA 90 bp CCTGCATCACAGCTGCGGCAGCTTCCTGGGCCTTCCGGTTCACAGTaGGCATTGGTGGGCCCATTCCTGGCCCTCCCTGTTGAGACATGC +
Preference number: 5 (lower is better)
Translates to: PASQLRQLPGPSGSQ*ALVGPFLALPVETC
Trigger: GCATGTCTCAACAGGGAGGGCCAGGAATGGGCCCACCAATGCCCACTGTGAACCGGAAGGCCCAGGAAGCTGCCGCAGCTGTGATGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS CCA 90 bp ATTCGGCTGCTGTGGGTACAGGCCAGGCTGGTGTCCTCCATACGGTaGCTGTCCTGTGGGAGGGCCTTGGCCTGGGTACTGCTGTCCGTA +
Preference number: 5 (lower is better)
Translates to: IRLLWVQARLVSSIR*LSCGRALAWVLLSV
Trigger: TACGGACAGCAGTACCCAGGCCAAGGCCCTCCCACAGGACAGCCACCGTATGGAGGACACCAGCCTGGCCTGTACCCACAGCAGCCGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092723.11
ENSMUST00000115797.9
ENSMUST00000115799.2
ENSMUST00000232180.2
CDS-3UTR CAA 90 bp TCCAGGAGTCGGATCTGGGTGAATGGAGGGAGGGCAGGCACAAGGCTTCCTAGGGAGGTGAGCAGCTGGTaGAGGGTCGGTGTAGCCCCC +
Preference number: 5 (low