Pregenerated sensors for ARHGEF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033542Ensembl transcript IDs: ENSMUST00000031750.14, ENSMUST00000182924.2
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATaGAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGC | + |
Preference number: 1 (lower is better) Translates to: ATLTLPPRNKDCRGT*NEDNLRLKAILEVS Trigger: GCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR GCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACCAGCACCAAGGCTCATaGCCCACAGTCCCTTTTCCT | + |
Preference number: 2 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDQHQGS*PTVPFP Trigger: AGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTG...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR TCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACCAGTCCCTTTTCCTATaGAGAAAGGTTCCCAGAATC | + |
Preference number: 2 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDQSLFL*RKVPRI Trigger: GATTCTGGGAACCTTTCTTCATAGGAAAAGGGACTG...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR GCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACTCCCAGAATCCAGTGTaGAGTCACTCAATATTCCCT | + |
Preference number: 2 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDSQNPV*SHSIFP Trigger: AGGGAATATTGAGTGACTGCACACTGGATTCTGGGA...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR CAA 90 bp | CACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTaGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTG | + |
Preference number: 2 (lower is better) Translates to: HKNAKKYWNKGLSSS*GFQKARFLIPRKLL Trigger: CAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR TCA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCAACTGGAACAAGGGACTaGGCTCATCCTTGGGATTTC | + |
Preference number: 2 (lower is better) Translates to: EERFPESSVQSLNIPYQATGTRD*AHPWDF Trigger: GAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGT...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR CCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGAACGCAAAGAAGTACTaGAACAAGGGACTGAGCTCA | + |
Preference number: 2 (lower is better) Translates to: DCRGTCNEDNLRLKAILENAKKY*NKGLSS Trigger: TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTT...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR TCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAGGAATGCTTGTTCATaGGCTCAGAAGACTCCTCAT | + |
Preference number: 2 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHRNACS*AQKTPH Trigger: ATGAGGAGTCTTCTGAGCTCATGAACAAGCATTCCT...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR TCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGAGGAATGCTTGTTCATaGGCTCAGAAGACTCCTCAT | + |
Preference number: 2 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQRNACS*AQKTPH Trigger: ATGAGGAGTCTTCTGAGCTCATGAACAAGCATTCCT...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR-3UTR CAA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGGACTGAGCTCATCCTaGGGATTTCAGAAGGCCAGG | + |
Preference number: 3 (lower is better) Translates to: DCRGTCNEDNLRLKAILEGLSSS*GFQKAR Trigger: CCTGGCCTTCTGAAATCCCAAGGATGAGCTCAGTCC...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR GCA 72 bp | AATGCCACCCTCACATTGCCACCAAGAAACAAGGACTaGAGGGGCACATGCAATGAGGACAATCTCCGATTG | + |
Preference number: 3 (lower is better) Translates to: NATLTLPPRNKD*RGTCNEDNLRL Trigger: CAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR GCA 72 bp | TACCATCTGGTAGTGGAAGTACAGCACCAAGGCTCATaGCCCACAGTCCCTTTTCCTATGAAGAAAGGTTCC | + |
Preference number: 3 (lower is better) Translates to: YHLVVEVQHQGS*PTVPFPMKKGS Trigger: GGAACCTTTCTTCATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAGATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR TCA 72 bp | AGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTaGGCTCATCCTTGGGATTTCAGAAGGCCAGGTTCC | + |
Preference number: 3 (lower is better) Translates to: STKTQRSTGTRD*AHPWDFRRPGS Trigger: GGAACCTGGCCTTCTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR TCA 72 bp | GCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATaGGGACAATCTCCGATTGAAAGCTATTCTAGAGGT | + |
Preference number: 3 (lower is better) Translates to: ATKKQGLQGHMQ*GQSPIESYSRG Trigger: ACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR GCA 72 bp | CTGCAGCAGGTTTCTAGGACCAGCCATTTCCAGGAATaGTTGTTCATGAGCTCAGAAGACTCCTCATCAAGA | + |
Preference number: 3 (lower is better) Translates to: LQQVSRTSHFQE*LFMSSEDSSSR Trigger: TCTTGATGAGGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAACCTGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR CCA 72 bp | ATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTaGAACAAGGGACTGAGCTCATCCTTGGGATTTCAG | + |
Preference number: 3 (lower is better) Translates to: IFPTKHKNAKKY*NKGLSSSLGFQ Trigger: CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACTCTTCCACCTCCTCCTaGTCTCCCAGGAGCCCACCA | + |
Preference number: 4 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDSSTSS*SPRSPP Trigger: TGGTGGGCTCCTGGGAGAGCAGGAGGAGGTGGAAGA...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGAGGGCGGTGCTGCCTTaGCACAGTGGAGTCAGGAAC | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMRAVLP*HSGVRN Trigger: GTTCCTGACTCCACTGTGGCAAGGCAGCACCGCCCT...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAACTCGATGGGCTTCCTTaGGGTTCTGAGCACGGACCT | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQLDGLP*GSEHGP Trigger: AGGTCCGTGCTCAGAACCTCAAGGAAGCCCATCGAG...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGACTGATGATCCTGGTTaGACAGGGTGCCCCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMTDDPG*TGCPAA Trigger: AGCTGCGGGGCACCCTGTCCAACCAGGATCATCAGT...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGGGGTCTCGGTCTTCTTaGGCTTCAGGATCCAAGGCA | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMGSRSS*ASGSKA Trigger: TGCCTTGGATCCTGAAGCTCAAGAAGACCGAGACCC...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGGGCAGAGGGCGGTGCTaGCTTGCCACAGTGGAGTCA | + |
Preference number: 4 (lower is better) Translates to: GTCNEDNLRLKAILEVSRGRGRC*LATVES Trigger: TGACTCCACTGTGGCAAGGCAGCACCGCCCTCTGCC...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGTCACATGGCCCACAATaGTGTGGAGTGTCAGCTGAG | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMSHGPQ*CGVSAE Trigger: CTCAGCTGACACTCCACATCATTGTGGGCCATGTGA...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACGTAGAGGCTACTTCATaGAGAAGGCCATCCCTCTCC | + |
Preference number: 4 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDVEATS*RRPSLS Trigger: GGAGAGGGATGGCCTTCTTCATGAAGTAGCCTCTAC...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAAGGCAGATCGTCTAAATaGTCCTCTCACTGGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQGRSSK*SSHWWL Trigger: GAGCCACCAGTGAGAGGATCATTTAGACGATCTGCC...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATTCACTGCTACTTTCTaGTGTCCTTGCTGGGTCGCG | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQFTATF*CPCWVA Trigger: CGCGACCCAGCAAGGACATCAGAAAGTAGCAGTGAA...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACGCCCTGGGGAGACACTaGACTCAAGGGCCGTCAGCT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHALGRH*TQGPSA Trigger: AGCTGACGGCCCTTGAGTTCAGTGTCTCCCCAGGGC...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | ATAGGTCTGTCCACAACTTACATCCGGCCAGCTCTGAATCTGCACTGTAGTAGCCTCGATGGGCTTCCTTaGGGTTCTGAGCACGGACCT | + |
Preference number: 4 (lower is better) Translates to: IGLSTTYIRPALNLHCSSLDGLP*GSEHGP Trigger: AGGTCCGTGCTCAGAACCTCAAGGAAGCCCATCGAG...GCTACTACAGTGCAGATTCAGAGCTGGCCGGATGTAAGTTGTGGACAGACCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | TTGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTTCCTGGACAGCACATaGCAAGAGCTCAGGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LGFQKARFLIPRKLLQQVFLDST*QELRGS Trigger: GCTGCCCCTGAGCTCTTGGCATGTGCTGTCCAGGAA...AACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCAGGGCGGTGCTGCCTTaGCACAGTGGAGTCAGGAAC | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSRAVLP*HSGVRN Trigger: GTTCCTGACTCCACTGTGGCAAGGCAGCACCGCCCT...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAAGGAGACAGTGGGTGGTaGAGAAACATTTGCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQGDSGW*RNICRR Trigger: TCTCCTGCAAATGTTTCTTCACCACCCACTGTCTCC...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | ATAGGTCTGTCCACAACTTACATCCGGCCAGCTCTGAATCTGCACTGTAGTAGCGTAGCTGGGAGGAGATaGGCTTGGAGCAACGTCTTG | + |
Preference number: 4 (lower is better) Translates to: IGLSTTYIRPALNLHCSSVAGRR*AWSNVL Trigger: CAAGACGTTGCTCCAAGCTCATCTCCTCCCAGCTAC...GCTACTACAGTGCAGATTCAGAGCTGGCCGGATGTAAGTTGTGGACAGACCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | ATAGGTCTGTCCACAACTTACATCCGGCCAGCTCTGAATCTGCACTGTAGTAGCTGTCCTCTCCTGGTCTaGTCCCTTCCACTGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: IGLSTTYIRPALNLHCSSCPLLV*SLPLLS Trigger: AGACAGCAGTGGAAGGGAGCAGACCAGGAGAGGACA...GCTACTACAGTGCAGATTCAGAGCTGGCCGGATGTAAGTTGTGGACAGACCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGGTGAGGCCAGCTGGATaGCTTCTCCAGTTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: GTCNEDNLRLKAILEVSRVRPAG*LLQLVV Trigger: CACCACCAACTGGAGAAGGCATCCAGCTGGCCTCAC...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCCTTGCTGTCCTCTCCTaGTCTGCTCCCTTCCACTGC | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSLAVLS*SAPFHC Trigger: GCAGTGGAAGGGAGCAGACCAGGAGAGGACAGCAAG...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAAGATGCCTTCTCCAGTTaGTGGTGGAGGGGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQDAFSS*WWRGFS Trigger: AGAAAAACCCCTCCACCACCAACTGGAGAAGGCATC...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGAGCCCTTTTGCTTGTTaGGTACCTGGCCCAGAACAA | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMSPFAC*VPGPEQ Trigger: TTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCT...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | ATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGTTTCCTTCTCAGCCCTaGGGAGACACTGAACTCAAG | + |
Preference number: 4 (lower is better) Translates to: MPPSHCHQETRTAGAHAMFPSQP*GDTELK Trigger: CTTGAGTTCAGTGTCTCCCCAGGGCTGAGAAGGAAA...CATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACCAAAGACATAAGTTCTaGCTGCAATTCTGCCCCCAC | + |
Preference number: 4 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDQRHKF*LQFCPH Trigger: GTGGGGGCAGAATTGCAGTCAGAACTTATGTCTTTG...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAAAGAGTTCCTTCCTCCTaGATTTCTACTTCCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQRVPSS*ISTSCP Trigger: GGGACAGGAAGTAGAAATTCAGGAGGAAGGAACTCT...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCATGTGGAGTGTCAGCTaGGGCAGAGGCTGTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTMWSVS*GRGCWG Trigger: ACCCCAACAGCCTCTGCCTCAGCTGACACTCCACAT...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | ATAGGTCTGTCCACAACTTACATCCGGCCAGCTCTGAATCTGCACTGTAGTAGCCTCTTCAGTGAGCCCTaGCTCATCCTTAGTGGTAGG | + |
Preference number: 4 (lower is better) Translates to: IGLSTTYIRPALNLHCSSLFSEP*LILSGR Trigger: CCTACCACTAAGGATGAGTCAGGGCTCACTGAAGAG...GCTACTACAGTGCAGATTCAGAGCTGGCCGGATGTAAGTTGTGGACAGACCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCGCTTCCTTGAGGTTCTaGGCACGGACCTCTGGGTTT | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSASLRF*ARTSGF Trigger: AAACCCAGAGGTCCGTGCTCAGAACCTCAAGGAAGC...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCTCTGCTCCCTTCCACTaGTGTCTGCCCACCACTATC | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSSAPFH*CLPTTI Trigger: GATAGTGGTGGGCAGACAGCAGTGGAAGGGAGCAGA...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | TTGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTGACTACCATGAGGACTaGTGGGCCTCTCTGGATTTG | + |
Preference number: 4 (lower is better) Translates to: LGFQKARFLIPRKLLQQVDYHED*WASLDL Trigger: CAAATCCAGAGAGGCCCAGCAGTCCTCATGGTAGTC...AACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | CACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGAGGCAGAGGGCGGTGCTaGCTTGCCACAGTGGAGTCA | + |
Preference number: 4 (lower is better) Translates to: HSIFPTKHKNAKKYWNKGGRGRC*LATVES Trigger: TGACTCCACTGTGGCAAGGCAGCACCGCCCTCTGCC...TCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
||
CDS-3UTR GCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACACAGGAAACCAGCCTTaGTCACCATCTGAGAGTCTT | + |
Preference number: 4 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDTGNQP*SPSESL Trigger: AAGACTCTCAGATGGTGAGCAAGGCTGGTTTCCTGT...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACCTGTCTTTAAGGCTCTaGATTACAGCTTCCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDLSLRL*ITASCW Trigger: CCAGCAGGAAGCTGTAATCCAGAGCCTTAAAGACAG...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGTGTTGTATCTCAGTCTaGAAGGGATGGAGGTCTGTG | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMCCISV*KGWRSV Trigger: CACAGACCTCCATCCCTTCCAGACTGAGATACAACA...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGTGTATAACTCCTCCCTaGATACTCTTGCTTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMCITPP*ILLLLP Trigger: GGGGAGAAGCAAGAGTATCCAGGGAGGAGTTATACA...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCAACTGATGATCCTGGTTaGACAGGGTGCCCCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: EERFPESSVQSLNIPYQATDDPG*TGCPAA Trigger: AGCTGCGGGGCACCCTGTCCAACCAGGATCATCAGT...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACAGACGTGTGATGCGTTaGAAGGGCAGTATCAGAAAG | + |
Preference number: 4 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDRRVMR*KGSIRK Trigger: CTTTCTGATACTGCCCTTCCAACGCATCACACGTCT...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGCACACAGGCTCCTTCTaGATCTGTGGAATATCAGCC | + |
Preference number: 4 (lower is better) Translates to: FQKARFLIPRKLLQQVSRHTGSF*ICGISA Trigger: GGCTGATATTCCACAGATTCAGAAGGAGCCTGTGTG...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGGAGAAATGGGTTGGTaGGACCATTCTGTTGGCTCC | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILEGEMGW*DHSVGS Trigger: GGAGCCAACAGAATGGTCTCACCAACCCATTTCTCC...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCGGCAGATCGTCTAAATaGTCCTCTCACTGGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSGRSSK*SSHWWL Trigger: GAGCCACCAGTGAGAGGATCATTTAGACGATCTGCC...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGGAAAACAACAGAATCTaGAGAGCCAGGAAGTCTTCC | + |
Preference number: 4 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMENNRI*RARKSS Trigger: GGAAGACTTCCTGGCTCTTCAGATTCTGTTGTTTTC...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGCCCTGGGGAGACACTaGACTCAAGGGCCGTCAGCT | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQALGRH*TQGPSA Trigger: AGCTGACGGCCCTTGAGTTCAGTGTCTCCCCAGGGC...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACGCTTCCTTGAGGTTCTaGGCACGGACCTCTGGGTTT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHASLRF*ARTSGF Trigger: AAACCCAGAGGTCCGTGCTCAGAACCTCAAGGAAGC...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | TTGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTGCAGCTGTTTCCCCTaGCTAAGCAGTTCACTTCCA | + |
Preference number: 4 (lower is better) Translates to: LGFQKARFLIPRKLLQQVCSCFP*LSSSLP Trigger: TGGAAGTGAACTGCTTAGGCAGGGGAAACAGCTGCA...AACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | TTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCACTGGAAGAGAAGGCTTaGTGTCCTCTCCTGGTCTGC | + |
Preference number: 4 (lower is better) Translates to: FPTKHKNAKKYWNKGLSSLEEKA*CPLLVC Trigger: GCAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAG...TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGCTCCCTGGATACTCTTaGTTCTCCCCCTGGACTTTG | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILELPGYS*FSPWTL Trigger: CAAAGTCCAGGGGGAGAAGCAAGAGTATCCAGGGAG...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAAAAGTGAGGCCAGCTGGATaGCTTCTCCAGTTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: KVPRIQCAVTQYSLPSTKVRPAG*LLQLVV Trigger: CACCACCAACTGGAGAAGGCATCCAGCTGGCCTCAC...TTTTGTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACGTGCCCTGTGCGTTGTaGAGGAGAAAGAGACGGAAG | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHVPCAL*RRKRRK Trigger: CTTCCGTCTCTTTCTCCTGCACAACGCACAGGGCAC...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | ATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGCACTTTGAGTCTCAGTaGGGAAGAGGAATTCCACTT | + |
Preference number: 4 (lower is better) Translates to: MPPSHCHQETRTAGAHAMHFESQ*GRGIPL Trigger: AAGTGGAATTCCTCTTCCGCACTGAGACTCAAAGTG...CATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCGTGAGACCATTCTGTTaGCTCCAGTGCAGGAGCTTG | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSVRPFC*LQCRSL Trigger: CAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCAC...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCAGGCAGGGGGAGAAATaGGTTGGTGAGACCATTCTG | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSRQGEK*VGETIL Trigger: CAGAATGGTCTCACCAACCCATTTCTCCCCCTGCCT...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGAGGTGGCACATaGGTACCTGGAGGATTTTGC | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILEVRGGT*VPGGFC Trigger: GCAAAATCCTCCAGGTACCCATGTGCCACCTCTGAC...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAACCTTTAGAAGATCTATaGAGCCCTGAACTTAGGGTC | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQPLEDL*SPELRV Trigger: GACCCTAAGTTCAGGGCTCCATAGATCTTCTAAAGG...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCGCCTTCTCCAGTTGGTaGTGGAGGGGTTTTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSAFSSW*WRGFSE Trigger: CTCAGAAAAACCCCTCCACCACCAACTGGAGAAGGC...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | ATAGGTCTGTCCACAACTTACATCCGGCCAGCTCTGAATCTGCACTGTAGTAGCATGAACTCTACCTGCTaGACAGGAAACCAGCCTTGC | + |
Preference number: 4 (lower is better) Translates to: IGLSTTYIRPALNLHCSSMNSTC*TGNQPC Trigger: GCAAGGCTGGTTTCCTGTCCAGCAGGTAGAGTTCAT...GCTACTACAGTGCAGATTCAGAGCTGGCCGGATGTAAGTTGTGGACAGACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR CAA 72 bp | GCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTaGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGA | + |
Preference number: 4 (lower is better) Translates to: AKKYWNKGLSSS*GFQKARFLIPR Trigger: TCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR CAA 72 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATaGAAAGCTATTCTAGAGGTCAGCAGGTTCACCTTC | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLR*KAILEVSRFTF Trigger: GAAGGTGAACCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCAAGCCTTCTTGCCCTTaGTTTTCTTGTGTGGCCTCC | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSKPSCP*FSCVAS Trigger: GGAGGCCACACAAGAAAATCAAGGGCAAGAAGGCTT...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATATTACACCTACTGGTaGGAGGCAAAGATTCTGTTG | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQYYTYW*EAKILL Trigger: CAACAGAATCTTTGCCTCTCACCAGTAGGTGTAATA...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGCCTTCCACTGCTGTCTaGCCACCACTATCCCCATTC | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQPSTAV*PPLSPF Trigger: GAATGGGGATAGTGGTGGGCAGACAGCAGTGGAAGG...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACTCCCTGGATACTCTTaGTTCTCCCCCTGGACTTTG | + |
Preference number: 4 (lower is better) Translates to: EERFPESSVQSLNIPYQALPGYS*FSPWTL Trigger: CAAAGTCCAGGGGGAGAAGCAAGAGTATCCAGGGAG...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGTCACTTCCACTGCCCTaGGTCTGCTCAGTCTCACCA | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQSLPLP*VCSVSP Trigger: TGGTGAGACTGAGCAGACCCAGGGCAGTGGAAGTGA...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCAGCCTTCTCCAGTTGGTaGTGGAGGGGTTTTTCTGAG | + |
Preference number: 4 (lower is better) Translates to: EERFPESSVQSLNIPYQAAFSSW*WRGFSE Trigger: CTCAGAAAAACCCCTCCACCACCAACTGGAGAAGGC...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGTGCTTGTTGGGTACCTaGCCCAGAACAACCTGTTCA | + |
Preference number: 4 (lower is better) Translates to: GTCNEDNLRLKAILEVSRCLLGT*PRTTCS Trigger: TGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCA...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGATGAACTCTACCTGCTaGACAGGAAACCAGCCTTGC | + |
Preference number: 4 (lower is better) Translates to: GTCNEDNLRLKAILEVSRMNSTC*TGNQPC Trigger: GCAAGGCTGGTTTCCTGTCCAGCAGGTAGAGTTCAT...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAATCCAGTGCAGGAGCTTaGGGGCTCAGTTCCTCACAC | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQSSAGA*GLSSSH Trigger: GTGTGAGGAACTGAGCCCTCAAGCTCCTGCACTGGA...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGATGAGAGAAAGAGAGTaGCATTCCCAGAGAGTCTGG | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILEMRERE*HSQRVW Trigger: CCAGACTCTCTGGGAATGTCACTCTCTTTCTCTCAT...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGAGCAGTAGAGGAGTCTaGAAAGACGATACCATCCCT | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILESSRGV*KDDTIP Trigger: AGGGATGGTATCGTCTTTTCAGACTCCTCTACTGCT...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATTATTAAATTCCTCCTaGGGGGCAGATCGTCTAAAT | + |
Preference number: 4 (lower is better) Translates to: ECHPHIATKKQGLQGHMQLLNSS*GADRLN Trigger: ATTTAGACGATCTGCCCCTCAGGAGGAATTTAATAA...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAAAATTCACTGCTACTTTCTaGTGTCCTTGCTGGGTCGCG | + |
Preference number: 4 (lower is better) Translates to: KVPRIQCAVTQYSLPSTKFTATF*CPCWVA Trigger: CGCGACCCAGCAAGGACATCAGAAAGTAGCAGTGAA...TTTTGTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGAGTAGCTGGGAGGAGATaGGCTTGGAGCAACGTCTTG | + |
Preference number: 4 (lower is better) Translates to: HSIFPTKHKNAKKYWNKGVAGRR*AWSNVL Trigger: CAAGACGTTGCTCCAAGCTCATCTCCTCCCAGCTAC...TCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCCGAAGCTTTTCACTTTaGGTCTCAGTGCGGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTRSFSL*VSVRKR Trigger: CCTCTTCCGCACTGAGACTCAAAGTGAAAAGCTTCG...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | CTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGCAGTTCACTTCCACTaGCCTGGGTCTGCTCAGTCT | + |
Preference number: 4 (lower is better) Translates to: LNIPYQAQKRKEVLEQGTAVHFH*PGSAQS Trigger: AGACTGAGCAGACCCAGGGCAGTGGAAGTGAACTGC...AGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGCTTTGGATCTGTCCCTaGTTCTGTTCTTCCTCGTTG | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILELWICP*FCSSSL Trigger: CAACGAGGAAGAACAGAAGCAGGGACAGATCCAAAG...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
||
CDS-3UTR CCA 90 bp | TTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCAATTACAGCTTCCTGCTaGTCTGGAGTGTTACAGGCC | + |
Preference number: 4 (lower is better) Translates to: FPTKHKNAKKYWNKGLSSITASC*SGVLQA Trigger: GGCCTGTAACACTCCAGACCAGCAGGAAGCTGTAAT...TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCTACCATGAGGACTGCTaGGCCTCTCTGGATTTGAAG | + |
Preference number: 4 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTYHEDC*ASLDLK Trigger: CTTCAAATCCAGAGAGGCCCAGCAGTCCTCATGGTA...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACATGGAGGTCTGTGTATaGTTGGGGCTTTCTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHMEVCV*LGLSGV Trigger: TACCCCAGAAAGCCCCAACCATACACAGACCTCCAT...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACGATGCCTTCTCCAGTTaGTGGTGGAGGGGTTTTTCT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHDAFSS*WWRGFS Trigger: AGAAAAACCCCTCCACCACCAACTGGAGAAGGCATC...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCATGCTTGTTGGGTACCTaGCCCAGAACAACCTGTTCA | + |
Preference number: 4 (lower is better) Translates to: EERFPESSVQSLNIPYQACLLGT*PRTTCS Trigger: TGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCA...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAGCCCTTTTGCTTGTTaGGTACCTGGCCCAGAACAA | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHSPFAC*VPGPEQ Trigger: TTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCT...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCGAAGCTGTCCAGTCTTaGTTATTAGGTCTTGGCTTG | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSEAVQS*LLGLGL Trigger: CAAGCCAAGACCTAATAATCAAGACTGGACAGCTTC...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGTTAGTGGTAGGTCTCTaGAGGTCTGGGATCCAAGGA | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQLVVGL*RSGIQG Trigger: TCCTTGGATCCCAGACCTTCAGAGACCTACCACTAA...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGGAAAACAACAGAATCTaGAGAGCCAGGAAGTCTTCC | + |
Preference number: 4 (lower is better) Translates to: GTCNEDNLRLKAILEVSRENNRI*RARKSS Trigger: GGAAGACTTCCTGGCTCTTCAGATTCTGTTGTTTTC...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | ATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGCAGCCATCGAGATTGTaGAATAAGTGGGAAAATTTT | + |
Preference number: 4 (lower is better) Translates to: MPPSHCHQETRTAGAHAMQPSRL*NKWENF Trigger: AAAATTTTCCCACTTATTTCACAATCTCGATGGCTG...CATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCTGGATTACAGCTTCCTaGTGGTCTGGAGTGTTACAG | + |
Preference number: 4 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTWITAS*WSGVLQ Trigger: CTGTAACACTCCAGACCAGCAGGAAGCTGTAATCCA...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACGACATAAGTTCTGACTaGAATTCTGCCCCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHDISSD*NSAPTL Trigger: CAGAGTGGGGGCAGAATTGCAGTCAGAACTTATGTC...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGCCCGGAAACTGCTGTTaGTATTCATTAGACTTTGGA | + |
Preference number: 4 (lower is better) Translates to: FQKARFLIPRKLLQQVSRPGNCC*YSLDFG Trigger: TCCAAAGTCTAATGAATAGCAACAGCAGTTTCCGGG...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACACAGGAAACCAGCCTTaGTCACCATCTGAGAGTCTT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHTGNQP*SPSESL Trigger: AAGACTCTCAGATGGTGAGCAAGGCTGGTTTCCTGT...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGCTTGATTTTCTTGTGTaGCCTCCAACTGCAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: GTCNEDNLRLKAILEVSRLDFLV*PPTAAV Trigger: AACAGCTGCAGTTGGAGGCCACACAAGAAAATCAAG...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GTTTCTAGGACCAGCCATTTCCAGGAATGCTTGTTCATGAGCTCAGAAGACTCCCTCCTTCTGAATCTGTaGAATATCAGCCACAGAGGA | + |
Preference number: 4 (lower is better) Translates to: VSRTSHFQECLFMSSEDSLLLNL*NISHRG Trigger: TCCTCTGTGGCTGATATTCCACAGATTCAGAAGGAG...GGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGTTTCCTTCTCAGCCCTaGGGAGACACTGAACTCAAG | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQFPSQP*GDTELK Trigger: CTTGAGTTCAGTGTCTCCCCAGGGCTGAGAAGGAAA...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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3UTR CAA 72 bp | CAGCAGGTTTCTAGGACCAGCCATTTCCAGGAATGCTaGTTCATGAGCTCAGAAGACTCCTCATCAAGAACA | + |
Preference number: 4 (lower is better) Translates to: QQVSRTSHFQEC*FMSSEDSSSRT Trigger: TGTTCTTGATGAGGAGTCTTCTGAGCTCATGAACAAGCATTCCTGGAAATGGCTGGTCCTAGAAACCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGAGGCCTATACATCCTTaGGATATAAGAGGAAGAGAT | + |
Preference number: 4 (lower is better) Translates to: FQKARFLIPRKLLQQVSRRPIHP*DIRGRD Trigger: ATCTCTTCCTCTTATATCTCAAGGATGTATAGGCCT...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAACTCTTCAGTGAGCCCTaGCTCATCCTTAGTGGTAGG | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQLFSEP*LILSGR Trigger: CCTACCACTAAGGATGAGTCAGGGCTCACTGAAGAG...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACGCCCACCAAAACAAATaGCTTCGTTCAGAGTTCCTT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHAHQNK*LRSEFL Trigger: AAGGAACTCTGAACGAAGGCATTTGTTTTGGTGGGC...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR GCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGCCCGGAAACTGCTGTTaGTATTCATTAGACTTTGGA | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILEPGNCC*YSLDFG Trigger: TCCAAAGTCTAATGAATAGCAACAGCAGTTTCCGGG...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGGAAATGAACTCTACCTaGTGGACAGGAAACCAGCCT | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQEMNST*WTGNQP Trigger: AGGCTGGTTTCCTGTCCAGCAGGTAGAGTTCATTTC...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | TTGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTGTTGTCTAGTTTGCTaGGTATGTCTAGCCATTCTT | + |
Preference number: 4 (lower is better) Translates to: LGFQKARFLIPRKLLQQVCCLVC*VCLAIL Trigger: AAGAATGGCTAGACATACCCAGCAAACTAGACAACA...AACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACCTTTAGAAGATCTATaGAGCCCTGAACTTAGGGTC | + |
Preference number: 4 (lower is better) Translates to: EERFPESSVQSLNIPYQAPLEDL*SPELRV Trigger: GACCCTAAGTTCAGGGCTCCATAGATCTTCTAAAGG...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | CTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTATGGAGGTCTGTGTATaGTTGGGGCTTTCTGGGGTA | + |
Preference number: 4 (lower is better) Translates to: LNIPYQAQKRKEVLEQGTMEVCV*LGLSGV Trigger: TACCCCAGAAAGCCCCAACCATACACAGACCTCCAT...AGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGTATAAGAGGAAGAGATaGAGGGATGGTAGAACTCAG | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILEYKRKR*RDGRTQ Trigger: CTGAGTTCTACCATCCCTCCATCTCTTCCTCTTATA...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGTTCTCCAGTTGGTGGTaGAGGGGTTTTTCTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQFSSWW*RGFSEF Trigger: GAACTCAGAAAAACCCCTCCACCACCAACTGGAGAA...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAAAAAGACGTGTGATGCGTTaGAAGGGCAGTATCAGAAAG | + |
Preference number: 4 (lower is better) Translates to: KVPRIQCAVTQYSLPSTKRRVMR*KGSIRK Trigger: CTTTCTGATACTGCCCTTCCAACGCATCACACGTCT...TTTTGTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGGAGGCACTGAACTTGTaGGGAGTCATAACACTCAAG | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQEALNL*GVITLK Trigger: CTTGAGTGTTATGACTCCCCACAAGTTCAGTGCCTC...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGGAAGCTGTCCAGTCTTaGTTATTAGGTCTTGGCTTG | + |
Preference number: 4 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQEAVQS*LLGLGL Trigger: CAAGCCAAGACCTAATAATCAAGACTGGACAGCTTC...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACTATTACACCTACTGGTaGGAGGCAAAGATTCTGTTG | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHYYTYW*EAKILL Trigger: CAACAGAATCTTTGCCTCTCACCAGTAGGTGTAATA...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAATTAGTGGTAGGTCTCTaGAGGTCTGGGATCCAAGGA | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQLVVGL*RSGIQG Trigger: TCCTTGGATCCCAGACCTTCAGAGACCTACCACTAA...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | CACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGAGCCAGAAGGATTTCCTaGCTTGTCTCCATATCCGAA | + |
Preference number: 4 (lower is better) Translates to: HSIFPTKHKNAKKYWNKGARRIS*LVSISE Trigger: TTCGGATATGGAGACAAGCCAGGAAATCCTTCTGGC...TCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACTATCCATGGAGACAGTaGGTGGTGAAGAAACATTTG | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHYPWRQ*VVKKHL Trigger: CAAATGTTTCTTCACCACCCACTGTCTCCATGGATA...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGCAATCAGCTCAAACTTaGCCTCTTGCAGTTTTTGAT | + |
Preference number: 4 (lower is better) Translates to: DCRGTCNEDNLRLKAILEQSAQT*PLAVFD Trigger: ATCAAAAACTGCAAGAGGCCAAGTTTGAGCTGATTG...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAGGCCTATACATCCTTaGGATATAAGAGGAAGAGAT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHRPIHP*DIRGRD Trigger: ATCTCTTCCTCTTATATCTCAAGGATGTATAGGCCT...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGAAATGAACTCTACCTaGTGGACAGGAAACCAGCCT | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQEMNST*WTGNQP Trigger: AGGCTGGTTTCCTGTCCAGCAGGTAGAGTTCATTTC...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAATTCTCCAGTTGGTGGTaGAGGGGTTTTTCTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQFSSWW*RGFSEF Trigger: GAACTCAGAAAAACCCCTCCACCACCAACTGGAGAA...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | AAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAAAATCTCTGGATTTGAAGTaGATTCTTCAGAGTCCTGTT | + |
Preference number: 4 (lower is better) Translates to: KVPRIQCAVTQYSLPSTKSLDLK*ILQSPV Trigger: AACAGGACTCTGAAGAATTCACTTCAAATCCAGAGA...TTTTGTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR TCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACCAGCCATCGAGATTGTaGAATAAGTGGGAAAATTTT | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHQPSRL*NKWENF Trigger: AAAATTTTCCCACTTATTTCACAATCTCGATGGCTG...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CCA 90 bp | AAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAAAACAATCAGCTCAAACTTaGCCTCTTGCAGTTTTTGAT | + |
Preference number: 4 (lower is better) Translates to: KVPRIQCAVTQYSLPSTKQSAQT*PLAVFD Trigger: ATCAAAAACTGCAAGAGGCCAAGTTTGAGCTGATTG...TTTTGTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR GCA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACTTTCTCTTTGCTAACTaGCAAAGTCAAAGACATAAG | + |
Preference number: 4 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHFLFAN*QSQRHK Trigger: CTTATGTCTTTGACTTTGGCAGTTAGCAAAGAGAAA...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAATATAAGAGGAAGAGATaGAGGGATGGTAGAACTCAG | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQYKRKR*RDGRTQ Trigger: CTGAGTTCTACCATCCCTCCATCTCTTCCTCTTATA...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR TCA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAATTATTAAATTCCTCCTaGGGGGCAGATCGTCTAAAT | + |
Preference number: 4 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQLLNSS*GADRLN Trigger: ATTTAGACGATCTGCCCCTCAGGAGGAATTTAATAA...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS GCA 90 bp | GAAGGCTTGCTGTCCTCTCCTGGTCTGCTCCCTTCCACTGCTGTCTaGCCACCACTATCCCCATTCCCTTGGACCCTGTCACCTGAGTCT | + |
Preference number: 5 (lower is better) Translates to: EGLLSSPGLLPSTAV*PPLSPFPWTLSPES Trigger: AGACTCAGGTGACAGGGTCCAAGGGAATGGGGATAGTGGTGGGCAGACAGCAGTGGAAGGGAGCAGACCAGGAGAGGACAGCAAGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 90 bp | CTACGGAAGCCACTGGAAGAGAAGGCTTGCTGTCCTCTCCTGGTCTaGTCCCTTCCACTGCTGTCTGCCCACCACTATCCCCATTCCCTT | + |
Preference number: 5 (lower is better) Translates to: LRKPLEEKACCPLLV*SLPLLSAHHYPHSL Trigger: AAGGGAATGGGGATAGTGGTGGGCAGACAGCAGTGGAAGGGAGCAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAGTGGCTTCCGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 90 bp | GGCAGGGGGAGAAATGGGTTGGTGAGACCATTCTGTTGGCTCCAGTaGAGGAGCTTGAGGGCTCAGTTCCTCACACACAGGCTCCTTCTG | + |
Preference number: 5 (lower is better) Translates to: GRGRNGLVRPFCWLQ*RSLRAQFLTHRLLL Trigger: CAGAAGGAGCCTGTGTGTGAGGAACTGAGCCCTCAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACCAACCCATTTCTCCCCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 90 bp | GAGGGCTGTGAGGGTTGGCTGTGTCAGAGGTGGCACATGGGTACCTaGAGGATTTTGCGGGTAGTGGAGGAGTCTCACATGGCCCACAAT | + |
Preference number: 5 (lower is better) Translates to: EGCEGWLCQRWHMGT*RILRVVEESHMAHN Trigger: ATTGTGGGCCATGTGAGACTCCTCCACTACCCGCAAAATCCTCCAGGTACCCATGTGCCACCTCTGACACAGCCAACCCTCACAGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 90 bp | CTGGAGGATTTTGCGGGTAGTGGAGGAGTCTCACATGGCCCACAATaGTGTGGAGTGTCAGCTGAGGCAGAGGCTGTTGGGGTCTCCTCA | + |
Preference number: 5 (lower is better) Translates to: LEDFAGSGGVSHGPQ*CGVSAEAEAVGVSS Trigger: TGAGGAGACCCCAACAGCCTCTGCCTCAGCTGACACTCCACATCATTGTGGGCCATGTGAGACTCCTCCACTACCCGCAAAATCCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 90 bp | AGCAGTTCACTTCCACTGCCCTGGGTCTGCTCAGTCTCACCAGGGTaGGTTTTGCAGGGAGGCCAAGATCCTCTAGGGATTGAGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: SSSLPLPWVCSVSPG*VLQGGQDPLGIEVS Trigger: AGACACCTCAATCCCTAGAGGATCTTGGCCTCCCTGCAAAACTCACCCTGGTGAGACTGAGCAGACCCAGGGCAGTGGAAGTGAACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 90 bp | AGCCCTTTTGCTTGTTGGGTACCTGGCCCAGAACAACCTGTTCACTaGTACTTTCTGATGTCCTTGCTGGGTCGCGTCTGTGAGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: SPFACWVPGPEQPVH*YFLMSLLGRVCEAS Trigger: GCTGGCCTCACAGACGCGACCCAGCAAGGACATCAGAAAGTAGCAGTGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 90 bp | GAACAATGTACCTGGGGAGAGAACCTCAGGATCTACGGAAGCCACTaGAAGAGAAGGCTTGCTGTCCTCTCCTGGTCTGCTCCCTTCCAC | + |
Preference number: 5 (lower is better) Translates to: EQCTWGENLRIYGSH*KRRLAVLSWSAPFH Trigger: GTGGAAGGGAGCAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAGTGGCTTCCGTAGATCCTGAGGTTCTCTCCCCAGGTACATTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAACTCCAGTGCAGGAGCTaGAGGGCTCAGTTCCTCACA | + |
Preference number: 5 (lower is better) Translates to: ECHPHIATKKQGLQGHMQLQCRS*RAQFLT Trigger: TGTGAGGAACTGAGCCCTCAAGCTCCTGCACTGGAG...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GAATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAAAGGTCTACGAAGGCCTaGCCGGTTCCAGCCCTTTTG | + |
Preference number: 5 (lower is better) Translates to: ECHPHIATKKQGLQGHMQRSTKA*PVPALL Trigger: CAAAAGGGCTGGAACCGGCAAGGCCTTCGTAGACCT...TTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | ATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGTCTACGAAGGCCTaGCCGGTTCCAGCCCTTTTG | + |
Preference number: 5 (lower is better) Translates to: MPPSHCHQETRTAGAHAMRSTKA*PVPALL Trigger: CAAAAGGGCTGGAACCGGCAAGGCCTTCGTAGACCT...CATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 90 bp | GACTCGATGGGCTTCCTTGAGGTTCTGAGCACGGACCTCTGGGTTTaGAATGAACTCTACCTGCTGGACAGGAAACCAGCCTTGCTCACC | + |
Preference number: 5 (lower is better) Translates to: DSMGFLEVLSTDLWV*NELYLLDRKPALLT Trigger: GGTGAGCAAGGCTGGTTTCCTGTCCAGCAGGTAGAGTTCATTTCAAACCCAGAGGTCCGTGCTCAGAACCTCAAGGAAGCCCATCGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGACTGGAAGAGAAGGCTaGCTGTCCTCTCCTGGTCTG | + |
Preference number: 5 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMTGREG*LSSPGL Trigger: CAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAGT...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | CTGGTAGTGGAAGTACAGCACCAAGGCTCATGCCCCACAGTCCCTTTTCCTATGGGATGCCTTCTCCAGTaGGTGGTGGAGGGGTTTTTC | + |
Preference number: 5 (lower is better) Translates to: LVVEVQHQGSCPTVPFPMGCLLQ*VVEGFF Trigger: GAAAAACCCCTCCACCACCAACTGGAGAAGGCATCC...CATAGGAAAAGGGACTGTGGGGCATGAGCCTTGGTGCTGTACTTCCACTACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 90 bp | AGCTGCAGTTTGGCCGTCTTGACTCGATGGGCTTCCTTGAGGTTCTaGGCACGGACCTCTGGGTTTGAAATGAACTCTACCTGCTGGACA | + |
Preference number: 5 (lower is better) Translates to: SCSLAVLTRWASLRF*ARTSGFEMNSTCWT Trigger: TGTCCAGCAGGTAGAGTTCATTTCAAACCCAGAGGTCCGTGCTCAGAACCTCAAGGAAGCCCATCGAGTCAAGACGGCCAAACTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 90 bp | CTACGAAGGCCTTGCCGGTTCCAGCCCTTTTGCTTGTTGGGTACCTaGCCCAGAACAACCTGTTCACTGCTACTTTCTGATGTCCTTGCT | + |
Preference number: 5 (lower is better) Translates to: LRRPCRFQPFCLLGT*PRTTCSLLLSDVLA Trigger: AGCAAGGACATCAGAAAGTAGCAGTGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGGCCTTCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS GCA 90 bp | TTCTGTTCTTCCTCGTTGCCGTTAAACCCCTCTTCCACCTCCTCCTaGTCTCCCAGGAGCCCACCAAAACAAATGCCTTCGTTCAGAGTT | + |
Preference number: 5 (lower is better) Translates to: FCSSSLPLNPSSTSS*SPRSPPKQMPSFRV Trigger: AACTCTGAACGAAGGCATTTGTTTTGGTGGGCTCCTGGGAGAGCAGGAGGAGGTGGAAGAGGGGTTTAACGGCAACGAGGAAGAACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 90 bp | TCTGGGTTTGAAATGAACTCTACCTGCTGGACAGGAAACCAGCCTTaGTCACCATCTGAGAGTCTTACACCCTCCAGCCAGCCATCACTG | + |
Preference number: 5 (lower is better) Translates to: SGFEMNSTCWTGNQP*SPSESLTPSSQPSL Trigger: CAGTGATGGCTGGCTGGAGGGTGTAAGACTCTCAGATGGTGAGCAAGGCTGGTTTCCTGTCCAGCAGGTAGAGTTCATTTCAAACCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 90 bp | GATTCTCTGTATACTGAGTGGCTACCCTTCTCTCTTCCACCTCCCTaGATTCCTGGTCCTGTCCCTCCTCTTCTGAATCTCTCAGAACCC | + |
Preference number: 5 (lower is better) Translates to: DSLYTEWLPFSLPPP*IPGPVPPLLNLSEP Trigger: GGGTTCTGAGAGATTCAGAAGAGGAGGGACAGGACCAGGAATCCAGGGAGGTGGAAGAGAGAAGGGTAGCCACTCAGTATACAGAGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACTTCTGTTCTTCCTCGTaGCCGTTAAACCCCTCTTCC | + |
Preference number: 5 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDFCSSS*PLNPSS Trigger: GGAAGAGGGGTTTAACGGCAACGAGGAAGAACAGAA...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | ACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGAGGACGGGGGTAATGGTTTGTaGTATCTCAGTCTGGAAGGG | + |
Preference number: 5 (lower is better) Translates to: TLTLPPRNKDCRGTCNEDGGNGL*YLSLEG Trigger: CCCTTCCAGACTGAGATACAACAAACCATTACCCCC...GTCCTCATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGGGATGCCTTCTCCAGTaGGTGGTGGAGGGGTTTTTC | + |
Preference number: 5 (lower is better) Translates to: FQKARFLIPRKLLQQVSRGCLLQ*VVEGFF Trigger: GAAAAACCCCTCCACCACCAACTGGAGAAGGCATCC...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | TTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCACCGGTTCCAGCCCTTTaGCTTGTTGGGTACCTGGCC | + |
Preference number: 5 (lower is better) Translates to: FPTKHKNAKKYWNKGLSSPVPAL*LVGYLA Trigger: GGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGG...TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 90 bp | CTCACCAGGGTGAGTTTTGCAGGGAGGCCAAGATCCTCTAGGGATTaGGGTGTCTGGGGAGGTTTCTTCCTCTTCTTTCTCTTTGCTAAC | + |
Preference number: 5 (lower is better) Translates to: LTRVSFAGRPRSSRD*GVWGGFFLFFLFAN Trigger: GTTAGCAAAGAGAAAGAAGAGGAAGAAACCTCCCCAGACACCTCAATCCCTAGAGGATCTTGGCCTCCCTGCAAAACTCACCCTGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGGGTGAGACCATTCTGTaGGCTCCAGTGCAGGAGCTT | + |
Preference number: 5 (lower is better) Translates to: GTCNEDNLRLKAILEVSRGETIL*APVQEL Trigger: AAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACC...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 90 bp | AAATCTGAAGAGCTTTCAGGCAAAATTGAAGGTCTACGAAGGCCTTaGCGGTTCCAGCCCTTTTGCTTGTTGGGTACCTGGCCCAGAACA | + |
Preference number: 5 (lower is better) Translates to: KSEELSGKIEGLRRP*RFQPFCLLGTWPRT Trigger: TGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGGCCTTCGTAGACCTTCAATTTTGCCTGAAAGCTCTTCAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGTTGCCCTTGATTTTCTaGTGTGGCCTCCAACTGCAG | + |
Preference number: 5 (lower is better) Translates to: FQKARFLIPRKLLQQVSRLPLIF*CGLQLQ Trigger: CTGCAGTTGGAGGCCACACAAGAAAATCAAGGGCAA...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | TTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCAGGTACCTGGAGGATTTaGCGGGTAGTGGAGGAGTCT | + |
Preference number: 5 (lower is better) Translates to: FPTKHKNAKKYWNKGLSSGTWRI*RVVEES Trigger: AGACTCCTCCACTACCCGCAAAATCCTCCAGGTACC...TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGAGGCAAAGATTCTGTaGATCTGCCTGTGGCTGGAG | + |
Preference number: 5 (lower is better) Translates to: DCRGTCNEDNLRLKAILEEAKIL*ICLWLE Trigger: CTCCAGCCACAGGCAGATCAACAGAATCTTTGCCTC...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCCAGCCCTTTTGCTTGTaGGGTACCTGGCCCAGAACA | + |
Preference number: 5 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTQPFCL*GTWPRT Trigger: TGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTG...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCTCTACCAGCTGCAGTTaGGCCGTCTTGACTCGATGG | + |
Preference number: 5 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTSTSCS*AVLTRW Trigger: CCATCGAGTCAAGACGGCCAAACTGCAGCTGGTAGA...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | TTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCTACCAGCTGCAGTTaGGCCGTCTTGACTCGATGG | + |
Preference number: 5 (lower is better) Translates to: FPTKHKNAKKYWNKGLSSSTSCS*AVLTRW Trigger: CCATCGAGTCAAGACGGCCAAACTGCAGCTGGTAGA...TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 90 bp | AGCTTGAGGGCTCAGTTCCTCACACACAGGCTCCTTCTGAATCTGTaGAATATCAGCCACAGAGGAAGAAATACCTGGGAACAATGTACC | + |
Preference number: 5 (lower is better) Translates to: SLRAQFLTHRLLLNL*NISHRGRNTWEQCT Trigger: GGTACATTGTTCCCAGGTATTTCTTCCTCTGTGGCTGATATTCCACAGATTCAGAAGGAGCCTGTGTGTGAGGAACTGAGCCCTCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGGGGGTAATGGTTTGTaGTATCTCAGTCTGGAAGGG | + |
Preference number: 5 (lower is better) Translates to: DCRGTCNEDNLRLKAILEGGNGL*YLSLEG Trigger: CCCTTCCAGACTGAGATACAACAAACCATTACCCCC...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAACCGGTTCCAGCCCTTTaGCTTGTTGGGTACCTGGCC | + |
Preference number: 5 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQPVPAL*LVGYLA Trigger: GGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGG...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACTCCCATCCCCTCCTTaGGTTTCTTCTCCCGGAAAA | + |
Preference number: 5 (lower is better) Translates to: EERFPESSVQSLNIPYQALPSPP*VSSPGK Trigger: TTTTCCGGGAGAAGAAACCAAAGGAGGGGATGGGAG...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | ATGCCACCCTCACATTGCCACCAAGAAACAAGGACTGCAGGGGCACATGCAATGCTCAAACTTGGCCTCTaGCAGTTTTTGATCTTCATG | + |
Preference number: 5 (lower is better) Translates to: MPPSHCHQETRTAGAHAMLKLGL*QFLIFM Trigger: CATGAAGATCAAAAACTGCAAGAGGCCAAGTTTGAG...CATTGCATGTGCCCCTGCAGTCCTTGTTTCTTGGTGGCAATGTGAGGGTGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTTGGGTCTCGGTCTTCTaGAGCTTCAGGATCCAAGGC | + |
Preference number: 5 (lower is better) Translates to: LNIPYQAQKRKEVLEQGTWVSVF*SFRIQG Trigger: GCCTTGGATCCTGAAGCTCAAGAAGACCGAGACCCA...AGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | CCTATGAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCGAAGCCTTCTTGCCCTaGATTTTCTTGTGTGGCCTC | + |
Preference number: 5 (lower is better) Translates to: PMKKGSQNPVCSHSIFPTEAFLP*IFLCGL Trigger: GAGGCCACACAAGAAAATCAAGGGCAAGAAGGCTTC...GGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTCATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | AAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATCCTTGGGATTTCAGGAGGCAAAGATTCTGTaGATCTGCCTGTGGCTGGAG | + |
Preference number: 5 (lower is better) Translates to: KNAKKYWNKGLSSSLGFQEAKIL*ICLWLE Trigger: CTCCAGCCACAGGCAGATCAACAGAATCTTTGCCTC...CTGAAATCCCAAGGATGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTCAGCCCTTTTGCTTGTaGGGTACCTGGCCCAGAACA | + |
Preference number: 5 (lower is better) Translates to: LNIPYQAQKRKEVLEQGTQPFCL*GTWPRT Trigger: TGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTG...AGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | AAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACAAAACTCCCATCCCCTCCTTaGGTTTCTTCTCCCGGAAAA | + |
Preference number: 5 (lower is better) Translates to: KVPRIQCAVTQYSLPSTKLPSPP*VSSPGK Trigger: TTTTCCGGGAGAAGAAACCAAAGGAGGGGATGGGAG...TTTTGTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGTCCCGGAAACTGCTGTaGCTATTCATTAGACTTTGG | + |
Preference number: 5 (lower is better) Translates to: FQKARFLIPRKLLQQVSRSRKLL*LFIRLW Trigger: CCAAAGTCTAATGAATAGCAACAGCAGTTTCCGGGA...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCAGAGACGTGTGATGCGTaGGAAGGGCAGTATCAGAAA | + |
Preference number: 5 (lower is better) Translates to: EERFPESSVQSLNIPYQAETCDA*EGQYQK Trigger: TTTCTGATACTGCCCTTCCAACGCATCACACGTCTC...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCAGCGAAGCTTTTCACTTaGAGTCTCAGTGCGGAAGAG | + |
Preference number: 5 (lower is better) Translates to: EERFPESSVQSLNIPYQAAKLFT*SLSAEE Trigger: CTCTTCCGCACTGAGACTCAAAGTGAAAAGCTTCGC...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | TTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGCTCATGTCCCTTAACACTTTaGACTGGTTCATCACGGGTC | + |
Preference number: 5 (lower is better) Translates to: FPTKHKNAKKYWNKGLSSCPLTL*TGSSRV Trigger: GACCCGTGATGAACCAGTCAAAAGTGTTAAGGGACA...TGAGCTCAGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GACTGCAGGGGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTTGGGGGTAATGGTTaGTTGTATCTCAGTCTGGAA | + |
Preference number: 5 (lower is better) Translates to: DCRGTCNEDNLRLKAILEVGGNG*LYLSLE Trigger: TTCCAGACTGAGATACAACAAACCATTACCCCCAAC...CTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCCCCTGCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAACCTCCCTGGATACTCTaGCTTCTCCCCCTGGACTTT | + |
Preference number: 5 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQPPWIL*LLPLDF Trigger: AAAGTCCAGGGGGAGAAGCAAGAGTATCCAGGGAGG...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | TTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCTAGGCTCAAACTTGGCCTCTaGCAGTTTTTGATCTTCATG | + |
Preference number: 5 (lower is better) Translates to: FQKARFLIPRKLLQQVSRLKLGL*QFLIFM Trigger: CATGAAGATCAAAAACTGCAAGAGGCCAAGTTTGAG...CCTAGAAACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | GAAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCAACTCTGTTGTCTAGTTaGCTGGGTATGTCTAGCCAT | + |
Preference number: 5 (lower is better) Translates to: EERFPESSVQSLNIPYQATLLSS*LGMSSH Trigger: ATGGCTAGACATACCCAGCAAACTAGACAACAGAGT...TGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | TTGGGATTTCAGAAGGCCAGGTTCCTGATCCCTAGAAAGCTTCTGCAGCAGGTTTCCTCTTCTTTCTCTTaGCTAACTGCCAAAGTCAAA | + |
Preference number: 5 (lower is better) Translates to: LGFQKARFLIPRKLLQQVSSSFS*LTAKVK Trigger: TTTGACTTTGGCAGTTAGCAAAGAGAAAGAAGAGGA...AACCTGCTGCAGAAGCTTTCTAGGGATCAGGAACCTGGCCTTCTGAAATCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | GGCACATGCAATGAGGACAATCTCCGATTGAAAGCTATTCTAGAGGTCAGCAGGGAGGCCTATACATCCTaGAGATATAAGAGGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: GTCNEDNLRLKAILEVSREAYTS*RYKRKR Trigger: TCTCTTCCTCTTATATCTCAAGGATGTATAGGCCTC...CCTGCTGACCTCTAGAATAGCTTTCAATCGGAGATTGTCCTCATTGCATGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 90 bp | TTTCTTGATCCTAAAGCTGACCTCCTTGTATTATTAAATTCCTCCTaGGGGGCAGATCGTCTAAATGATCCTCTCACTGGTGGCTCAGAC | + |
Preference number: 5 (lower is better) Translates to: FLDPKADLLVLLNSS*GADRLNDPLTGGSD Trigger: GTCTGAGCCACCAGTGAGAGGATCATTTAGACGATCTGCCCCTCAGGAGGAATTTAATAATACAAGGAGGTCAGCTTTAGGATCAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS-3UTR CAA 90 bp | AAGAAAGGTTCCCAGAATCCAGTGTGCAGTCACTCAATATTCCCTACCAAGCACTTGAAGGAAGCCTTCTaGCCCTTGATTTTCTTGTGT | + |
Preference number: 5 (lower is better) Translates to: KKGSQNPVCSHSIFPTKHLKEAF*PLIFLC Trigger: ACACAAGAAAATCAAGGGCAAGAAGGCTTCCTTCAA...GTGCTTGGTAGGGAATATTGAGTGACTGCACACTGGATTCTGGGAACCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | CAGTCACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGAGACGTGTGATGCGTaGGAAGGGCAGTATCAGAAA | + |
Preference number: 5 (lower is better) Translates to: QSLNIPYQAQKRKEVLEQETCDA*EGQYQK Trigger: TTTCTGATACTGCCCTTCCAACGCATCACACGTCTC...TTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS GCA 90 bp | TCTTTCTCTTTGCTAACTGCCAAAGTCAAAGACATAAGTTCTGACTaGAATTCTGCCCCCACTCTGTTGTCTAGTTTGCTGGGTATGTCT | + |
Preference number: 5 (lower is better) Translates to: SFSLLTAKVKDISSD*NSAPTLLSSLLGMS Trigger: AGACATACCCAGCAAACTAGACAACAGAGTGGGGGCAGAATTGCAGTCAGAACTTATGTCTTTGACTTTGGCAGTTAGCAAAGAGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | CACTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGATTCTTCTGTTTCTTCTaGGGGTCAGAGAGCCATAGA | + |
Preference number: 5 (lower is better) Translates to: HSIFPTKHKNAKKYWNKGFFCFF*GSESHR Trigger: TCTATGGCTCTCTGACCCCAAGAAGAAACAGAAGAA...TCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS-3UTR CAA 90 bp | CTCAATATTCCCTACCAAGCACAAAAACGCAAAGAAGTACTGGAACAAGGGACTGAGGCCTATACATCCTaGAGATATAAGAGGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: LNIPYQAQKRKEVLEQGTEAYTS*RYKRKR Trigger: TCTCTTCCTCTTATATCTCAAGGATGTATAGGCCTC...AGTCCCTTGTTCCAGTACTTCTTTGCGTTTTTGTGCTTGGTAGGGAATATTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS GCA 72 bp | CCACTGGAAGAGAAGGCTTGCTGTCCTCTCCTGGTCTaGTCCCTTCCACTGCTGTCTGCCCACCACTATCCC | + |
Preference number: 6 (lower is better) Translates to: PLEEKACCPLLV*SLPLLSAHHYP Trigger: GGGATAGTGGTGGGCAGACAGCAGTGGAAGGGAGCAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | GGAAGCCACTGGAAGAGAAGGCTTGCTGTCCTCTCCTaGTCTGCTCCCTTCCACTGCTGTCTGCCCACCACT | + |
Preference number: 6 (lower is better) Translates to: GSHWKRRLAVLS*SAPFHCCLPTT Trigger: AGTGGTGGGCAGACAGCAGTGGAAGGGAGCAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAGTGGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | GGCAGGGGGAGAAATGGGTTGGTGAGACCATTCTGTTaGCTCCAGTGCAGGAGCTTGAGGGCTCAGTTCCTC | + |
Preference number: 6 (lower is better) Translates to: GRGRNGLVRPFC*LQCRSLRAQFL Trigger: GAGGAACTGAGCCCTCAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACCAACCCATTTCTCCCCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 90 bp | GAGGGTTGGCTGTGTCAGAGGTGGCACATGGGTACCTGGAGGATTTaGCGGGTAGTGGAGGAGTCTCACATGGCCCACAATGATGTGGAG | + |
Preference number: 6 (lower is better) Translates to: EGWLCQRWHMGTWRI*RVVEESHMAHNDVE Trigger: CTCCACATCATTGTGGGCCATGTGAGACTCCTCCACTACCCGCAAAATCCTCCAGGTACCCATGTGCCACCTCTGACACAGCCAACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | TTTGCGGGTAGTGGAGGAGTCTCACATGGCCCACAATaGTGTGGAGTGTCAGCTGAGGCAGAGGCTGTTGGG | + |
Preference number: 6 (lower is better) Translates to: FAGSGGVSHGPQ*CGVSAEAEAVG Trigger: CCCAACAGCCTCTGCCTCAGCTGACACTCCACATCATTGTGGGCCATGTGAGACTCCTCCACTACCCGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | TCCACTGCTGTCTGCCCACCACTATCCCCATTCCCTTaGACCCTGTCACCTGAGTCTACAACCTCCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: STAVCPPLSPFP*TLSPESTTSFW Trigger: CCAGAAGGAGGTTGTAGACTCAGGTGACAGGGTCCAAGGGAATGGGGATAGTGGTGGGCAGACAGCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | ACCTGGGGAGAGAACCTCAGGATCTACGGAAGCCACTaGAAGAGAAGGCTTGCTGTCCTCTCCTGGTCTGCT | + |
Preference number: 6 (lower is better) Translates to: TWGENLRIYGSH*KRRLAVLSWSA Trigger: AGCAGACCAGGAGAGGACAGCAAGCCTTCTCTTCCAGTGGCTTCCGTAGATCCTGAGGTTCTCTCCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | GAGGGTTGGCTGTGTCAGAGGTGGCACATGGGTACCTaGAGGATTTTGCGGGTAGTGGAGGAGTCTCACATG | + |
Preference number: 6 (lower is better) Translates to: EGWLCQRWHMGT*RILRVVEESHM Trigger: CATGTGAGACTCCTCCACTACCCGCAAAATCCTCCAGGTACCCATGTGCCACCTCTGACACAGCCAACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | AGGCAGGGGGAGAAATGGGTTGGTGAGACCATTCTGTaGGCTCCAGTGCAGGAGCTTGAGGGCTCAGTTCCT | + |
Preference number: 6 (lower is better) Translates to: RQGEKWVGETIL*APVQELEGSVP Trigger: AGGAACTGAGCCCTCAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACCAACCCATTTCTCCCCCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | GGTCTACGAAGGCCTTGCCGGTTCCAGCCCTTTTGCTaGTTGGGTACCTGGCCCAGAACAACCTGTTCACTG | + |
Preference number: 6 (lower is better) Translates to: GLRRPCRFQPFC*LGTWPRTTCSL Trigger: CAGTGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGGCCTTCGTAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 72 bp | AGTCTCACATGGCCCACAATGATGTGGAGTGTCAGCTaGGGCAGAGGCTGTTGGGGTCTCCTCAGGAAGGAT | + |
Preference number: 6 (lower is better) Translates to: SLTWPTMMWSVS*GRGCWGLLRKD Trigger: ATCCTTCCTGAGGAGACCCCAACAGCCTCTGCCTCAGCTGACACTCCACATCATTGTGGGCCATGTGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | AGTCTTACACCCTCCAGCCAGCCATCACTGCTTTGCTaGGTGACCATCACCACATCCGCCTTCTCTAGTGCC | + |
Preference number: 6 (lower is better) Translates to: SLTPSSQPSLLC*VTITTSAFSSA Trigger: GGCACTAGAGAAGGCGGATGTGGTGATGGTCACTCAGCAAAGCAGTGATGGCTGGCTGGAGGGTGTAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS GCA 72 bp | GAAGGTCTACGAAGGCCTTGCCGGTTCCAGCCCTTTTaGTTGTTGGGTACCTGGCCCAGAACAACCTGTTCA | + |
Preference number: 6 (lower is better) Translates to: EGLRRPCRFQPF*LLGTWPRTTCS Trigger: TGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGGCCTTCGTAGACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 72 bp | CAGTGGGTGGTGAAGAAACATTTGCAGGAGAGCCTATaGCAAAGGCTGAGTTCTGTGGGGAGCCCCATGTCG | + |
Preference number: 6 (lower is better) Translates to: QWVVKKHLQESL*QRLSSVGSPMS Trigger: CGACATGGGGCTCCCCACAGAACTCAGCCTTTGCCATAGGCTCTCCTGCAAATGTTTCTTCACCACCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | TACGAAGGCCTTGCCGGTTCCAGCCCTTTTGCTTGTTaGGTACCTGGCCCAGAACAACCTGTTCACTGCTAC | + |
Preference number: 6 (lower is better) Translates to: YEGLAGSSPFAC*VPGPEQPVHCY Trigger: GTAGCAGTGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGGCCTTCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 72 bp | CTCTCGAGGCTTGTAGGCACGGAGGCACTGAACTTGTaGGGAGTCATAACACTCAAGGAGGTCCAACTCCTC | + |
Preference number: 6 (lower is better) Translates to: LSRLVGTEALNL*GVITLKEVQLL Trigger: GAGGAGTTGGACCTCCTTGAGTGTTATGACTCCCCACAAGTTCAGTGCCTCCGTGCCTACAAGCCTCGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CAA 72 bp | TTGGTGAGACCATTCTGTTGGCTCCAGTGCAGGAGCTaGAGGGCTCAGTTCCTCACACACAGGCTCCTTCTG | + |
Preference number: 6 (lower is better) Translates to: LVRPFCWLQCRS*RAQFLTHRLLL Trigger: CAGAAGGAGCCTGTGTGTGAGGAACTGAGCCCTCAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | CTACGAAGGCCTTGCCGGTTCCAGCCCTTTTGCTTGTaGGGTACCTGGCCCAGAACAACCTGTTCACTGCTA | + |
Preference number: 6 (lower is better) Translates to: LRRPCRFQPFCL*GTWPRTTCSLL Trigger: TAGCAGTGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGGCCTTCGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 72 bp | TCCTCTCACTGGTGGCTCAGACTCTTCAGTGAGCCCTaGCTCATCCTTAGTGGTAGGTCTCTGAAGGTCTGG | + |
Preference number: 6 (lower is better) Translates to: SSHWWLRLFSEP*LILSGRSLKVW Trigger: CCAGACCTTCAGAGACCTACCACTAAGGATGAGTCAGGGCTCACTGAAGAGTCTGAGCCACCAGTGAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 72 bp | GGCTTCCTTGAGGTTCTGAGCACGGACCTCTGGGTTTaGAATGAACTCTACCTGCTGGACAGGAAACCAGCC | + |
Preference number: 6 (lower is better) Translates to: GFLEVLSTDLWV*NELYLLDRKPA Trigger: GGCTGGTTTCCTGTCCAGCAGGTAGAGTTCATTTCAAACCCAGAGGTCCGTGCTCAGAACCTCAAGGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CAA 90 bp | AGAAATGGGTTGGTGAGACCATTCTGTTGGCTCCAGTGCAGGAGCTaGAGGGCTCAGTTCCTCACACACAGGCTCCTTCTGAATCTGTGG | + |
Preference number: 6 (lower is better) Translates to: RNGLVRPFCWLQCRS*RAQFLTHRLLLNLW Trigger: CCACAGATTCAGAAGGAGCCTGTGTGTGAGGAACTGAGCCCTCAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACCAACCCATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | TTGGCCGTCTTGACTCGATGGGCTTCCTTGAGGTTCTaGGCACGGACCTCTGGGTTTGAAATGAACTCTACC | + |
Preference number: 6 (lower is better) Translates to: LAVLTRWASLRF*ARTSGFEMNST Trigger: GGTAGAGTTCATTTCAAACCCAGAGGTCCGTGCTCAGAACCTCAAGGAAGCCCATCGAGTCAAGACGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 72 bp | CCTTGCCGGTTCCAGCCCTTTTGCTTGTTGGGTACCTaGCCCAGAACAACCTGTTCACTGCTACTTTCTGAT | + |
Preference number: 6 (lower is better) Translates to: PCRFQPFCLLGT*PRTTCSLLLSD Trigger: ATCAGAAAGTAGCAGTGAACAGGTTGTTCTGGGCCAGGTACCCAACAAGCAAAAGGGCTGGAACCGGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CAA 90 bp | CTGGGCTTCCTGAGATTGAAGGAAGCCTTCTTGCCCTTGATTTTCTaGTGTGGCCTCCAACTGCAGCTGTTTCCCCTGCCTAAGCAGTTC | + |
Preference number: 6 (lower is better) Translates to: LGFLRLKEAFLPLIF*CGLQLQLFPLPKQF Trigger: GAACTGCTTAGGCAGGGGAAACAGCTGCAGTTGGAGGCCACACAAGAAAATCAAGGGCAAGAAGGCTTCCTTCAATCTCAGGAAGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 90 bp | ATCAAGAGATTCTTCAGGAGCAAAAGAGGCAGGGGGAGAAATGGGTaGGTGAGACCATTCTGTTGGCTCCAGTGCAGGAGCTTGAGGGCT | + |
Preference number: 6 (lower is better) Translates to: IKRFFRSKRGRGRNG*VRPFCWLQCRSLRA Trigger: AGCCCTCAAGCTCCTGCACTGGAGCCAACAGAATGGTCTCACCAACCCATTTCTCCCCCTGCCTCTTTTGCTCCTGAAGAATCTCTTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 72 bp | CTGACTGCAATTCTGCCCCCACTCTGTTGTCTAGTTTaGTGGGTATGTCTAGCCATTCTTCCTGGACAGCAC | + |
Preference number: 6 (lower is better) Translates to: LTAILPPLCCLV*WVCLAILPGQH Trigger: GTGCTGTCCAGGAAGAATGGCTAGACATACCCAGCAAACTAGACAACAGAGTGGGGGCAGAATTGCAGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 72 bp | CCTCCTCCTGCTCTCCCAGGAGCCCACCAAAACAAATaGCTTCGTTCAGAGTTCCTTCCTCCTGAATTTCTA | + |
Preference number: 6 (lower is better) Translates to: PPPALPGAHQNK*LRSEFLPPEFL Trigger: TAGAAATTCAGGAGGAAGGAACTCTGAACGAAGGCATTTGTTTTGGTGGGCTCCTGGGAGAGCAGGAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | CTCCTTTGGTTTCTTCTCCCGGAAAACAACAGAATCTaGAGAGCCAGGAAGTCTTCCCGCAGCTGGATTTCG | + |
Preference number: 6 (lower is better) Translates to: LLWFLLPENNRI*RARKSSRSWIS Trigger: CGAAATCCAGCTGCGGGAAGACTTCCTGGCTCTTCAGATTCTGTTGTTTTCCGGGAGAAGAAACCAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 72 bp | TTGTCTAGTTTGCTGGGTATGTCTAGCCATTCTTCCTaGACAGCACATGCCAAGAGCTCAGGGGCAGCTATT | + |
Preference number: 6 (lower is better) Translates to: LSSLLGMSSHSS*TAHAKSSGAAI Trigger: AATAGCTGCCCCTGAGCTCTTGGCATGTGCTGTCCAGGAAGAATGGCTAGACATACCCAGCAAACTAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | ACTGCAATTCTGCCCCCACTCTGTTGTCTAGTTTGCTaGGTATGTCTAGCCATTCTTCCTGGACAGCACATG | + |
Preference number: 6 (lower is better) Translates to: TAILPPLCCLVC*VCLAILPGQHM Trigger: CATGTGCTGTCCAGGAAGAATGGCTAGACATACCCAGCAAACTAGACAACAGAGTGGGGGCAGAATTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | CTGGGCTTCCTGAGATTGAAGGAAGCCTTCTTGCCCTaGATTTTCTTGTGTGGCCTCCAACTGCAGCTGTTT | + |
Preference number: 6 (lower is better) Translates to: LGFLRLKEAFLP*IFLCGLQLQLF Trigger: AAACAGCTGCAGTTGGAGGCCACACAAGAAAATCAAGGGCAAGAAGGCTTCCTTCAATCTCAGGAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | AGCACATGCCAAGAGCTCAGGGGCAGCTATTGTTCTTaGCAGTCTGTCTTTAAGGCTCTGGATTACAGCTTC | + |
Preference number: 6 (lower is better) Translates to: STCQELRGSYCS*QSVFKALDYSF Trigger: GAAGCTGTAATCCAGAGCCTTAAAGACAGACTGTCAAGAACAATAGCTGCCCCTGAGCTCTTGGCATGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | GGTGTATGGTCACCCATGTCCCTTAACACTTTTGACTaGTTCATCACGGGTCTGTGTCCATCTGTCCACTTA | + |
Preference number: 6 (lower is better) Translates to: GVWSPMSLNTFD*FITGLCPSVHL Trigger: TAAGTGGACAGATGGACACAGACCCGTGATGAACCAGTCAAAAGTGTTAAGGGACATGGGTGACCATACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | GCTCAGTTCCTCACACACAGGCTCCTTCTGAATCTGTaGAATATCAGCCACAGAGGAAGAAATACCTGGGAA | + |
Preference number: 6 (lower is better) Translates to: AQFLTHRLLLNL*NISHRGRNTWE Trigger: TTCCCAGGTATTTCTTCCTCTGTGGCTGATATTCCACAGATTCAGAAGGAGCCTGTGTGTGAGGAACTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | CTGGATTTCGTAAATCTGAAGAGCTTTCAGGCAAAATaGAAGGTCTACGAAGGCCTTGCCGGTTCCAGCCCT | + |
Preference number: 6 (lower is better) Translates to: LDFVNLKSFQAK*KVYEGLAGSSP Trigger: AGGGCTGGAACCGGCAAGGCCTTCGTAGACCTTCAATTTTGCCTGAAAGCTCTTCAGATTTACGAAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CCA 72 bp | GCAGCTATTGTTCTTGACAGTCTGTCTTTAAGGCTCTaGATTACAGCTTCCTGCTGGTCTGGAGTGTTACAG | + |
Preference number: 6 (lower is better) Translates to: AAIVLDSLSLRL*ITASCWSGVLQ Trigger: CTGTAACACTCCAGACCAGCAGGAAGCTGTAATCCAGAGCCTTAAAGACAGACTGTCAAGAACAATAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CCA 72 bp | AAAGACGATACCATCCCTACTTCTTCTGTTTCTTCTTaGGGTCAGAGAGCCATAGATGGCTGGTTTAGGAGG | + |
Preference number: 6 (lower is better) Translates to: KDDTIPTSSVSS*GQRAIDGWFRR Trigger: CCTCCTAAACCAGCCATCTATGGCTCTCTGACCCCAAGAAGAAACAGAAGAAGTAGGGATGGTATCGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | AACTCAGGCATATCAGGAGTTGGGGGTAATGGTTTGTaGTATCTCAGTCTGGAAGGGATGGAGGTCTGTGTA | + |
Preference number: 6 (lower is better) Translates to: NSGISGVGGNGL*YLSLEGMEVCV Trigger: TACACAGACCTCCATCCCTTCCAGACTGAGATACAACAAACCATTACCCCCAACTCCTGATATGCCTGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS CAA 90 bp | AAAGTCAAAGACATAAGTTCTGACTGCAATTCTGCCCCCACTCTGTaGTCTAGTTTGCTGGGTATGTCTAGCCATTCTTCCTGGACAGCA | + |
Preference number: 6 (lower is better) Translates to: KVKDISSDCNSAPTL*SSLLGMSSHSSWTA Trigger: TGCTGTCCAGGAAGAATGGCTAGACATACCCAGCAAACTAGACAACAGAGTGGGGGCAGAATTGCAGTCAGAACTTATGTCTTTGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | ATTATTAAATTCCTCCTGAGGGGCAGATCGTCTAAATaGTCCTCTCACTGGTGGCTCAGACTCTTCAGTGAG | + |
Preference number: 6 (lower is better) Translates to: IIKFLLRGRSSK*SSHWWLRLFSE Trigger: CTCACTGAAGAGTCTGAGCCACCAGTGAGAGGATCATTTAGACGATCTGCCCCTCAGGAGGAATTTAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 72 bp | GTCTTGATTATTAGGTCTTGGCTTGGCTTGACCTCCTaGATGTATAACTCCTCCCTGGATACTCTTGCTTCT | + |
Preference number: 6 (lower is better) Translates to: VLIIRSWLGLTS*MYNSSLDTLAS Trigger: AGAAGCAAGAGTATCCAGGGAGGAGTTATACATTCAGGAGGTCAAGCCAAGCCAAGACCTAATAATCAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS TCA 72 bp | CCTAAAGCTGACCTCCTTGTATTATTAAATTCCTCCTaGGGGGCAGATCGTCTAAATGATCCTCTCACTGGT | + |
Preference number: 6 (lower is better) Translates to: PKADLLVLLNSS*GADRLNDPLTG Trigger: ACCAGTGAGAGGATCATTTAGACGATCTGCCCCTCAGGAGGAATTTAATAATACAAGGAGGTCAGCTTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031750.14 ENSMUST00000182924.2 |
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CDS GCA 72 bp | TTGCTAACTGCCAAAGTCAAAGACATAAGTTCTGACTaGAATTCTGCCCCCACTCTGTTGTCTAGTTTGCTG | + |
Preference number: 6 (lower is better) Translates to: LLTAKVKDISSD*NSAPTLLSSLL Trigger: CAGCAAACTAGACAACAGAGTGGGGGCAGAATTGCAGTCAGAACTTATGTCTTTGACTTTGGCAGTTAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | CTCCTTCTGGTCCCTTACGGGCATCACTTTTCCTGTTaGATCATGATCTCTCTGCTTTCTCTTTACAATCTC | + |
Preference number: 6 (lower is better) Translates to: LLLVPYGHHFSC*IMISLLSLYNL Trigger: GAGATTGTAAAGAGAAAGCAGAGAGATCATGATCAAACAGGAAAAGTGATGCCCGTAAGGGACCAGAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 90 bp | CTAGGGATTGAGGTGTCTGGGGAGGTTTCTTCCTCTTCTTTCTCTTaGCTAACTGCCAAAGTCAAAGACATAAGTTCTGACTGCAATTCT | + |
Preference number: 6 (lower is better) Translates to: LGIEVSGEVSSSSFS*LTAKVKDISSDCNS Trigger: AGAATTGCAGTCAGAACTTATGTCTTTGACTTTGGCAGTTAGCAAAGAGAAAGAAGAGGAAGAAACCTCCCCAGACACCTCAATCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS TCA 72 bp | GTCCTGTTTCAAAGCAAACAAAGCAGTAGAGGAGTCTaGAAAGACGATACCATCCCTACTTCTTCTGTTTCT | + |
Preference number: 6 (lower is better) Translates to: VLFQSKQSSRGV*KDDTIPTSSVS Trigger: AGAAACAGAAGAAGTAGGGATGGTATCGTCTTTTCAGACTCCTCTACTGCTTTGTTTGCTTTGAAACAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS GCA 72 bp | TGTCTCCATATCCGAAGATTCTTTCTTGAAGAAAATTaGCATACTATTAGGTGTATGGTCACCCATGTCCCT | + |
Preference number: 6 (lower is better) Translates to: CLHIRRFFLEEN*HTIRCMVTHVP Trigger: AGGGACATGGGTGACCATACACCTAATAGTATGGCAATTTTCTTCAAGAAAGAATCTTCGGATATGGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |
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CDS CAA 72 bp | ATTTCCTGGCTTGTCTCCATATCCGAAGATTCTTTCTaGAAGAAAATTGCCATACTATTAGGTGTATGGTCA | + |
Preference number: 6 (lower is better) Translates to: ISWLVSISEDSF*KKIAILLGVWS Trigger: TGACCATACACCTAATAGTATGGCAATTTTCTTCAAGAAAGAATCTTCGGATATGGAGACAAGCCAGGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031750.14 |