Pregenerated sensors for ARHGEF37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045094Ensembl transcript IDs: ENSMUST00000171629.3, ENSMUST00000236608.2, ENSMUST00000237557.2
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGTGTCCTACGTCTTGGGCCTCACATCTACCCAACCTCAGCTCCCTaGAGCCTCCATGGCCTCAGAGGCAAACCCAGGCCACCTGTGTTC | + |
Preference number: 1 (lower is better) Translates to: CVLRLGPHIYPTSAP*SLHGLRGKPRPPVF Trigger: GAACACAGGTGGCCTGGGTTTGCCTCTGAGGCCATGGAGGCTGCAGGGAGCTGAGGTTGGGTAGATGTGAGGCCCAAGACGTAGGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 90 bp | CAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTaGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGA | + |
Preference number: 1 (lower is better) Translates to: QPHTPTDPPSNSPLP*NRLRVCTHSPDLCR Trigger: TCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR TCA 90 bp | GGTCAGAGCCTGGGCTTAAGGAAAAGGACACTGTTGGCTTGGACATaGGGGGTGGCACAGGACTGCTTTACTCTGCTAACCCAAGCCAGC | + |
Preference number: 1 (lower is better) Translates to: GQSLGLRKRTLLAWT*GVAQDCFTLLTQAS Trigger: GCTGGCTTGGGTTAGCAGAGTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTTTCCTTAAGCCCAGGCTCTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 90 bp | GCTAAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATaGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAG | + |
Preference number: 1 (lower is better) Translates to: AKQARGSKPVKNIPP*PLHQLLLPDLLEFQ Trigger: CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 90 bp | AAACACCACGAGTCTAGACCATTGCAATCAGCCTCACACACCCACTaGTCCACCCTCAAATTCCCCTCTTCCCTGGAACCGCCTCCGAGT | + |
Preference number: 1 (lower is better) Translates to: KHHESRPLQSASHTH*STLKFPSSLEPPPS Trigger: ACTCGGAGGCGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAGACTCGTGGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CCA 90 bp | CCCATTCCCAGACCCAGTAGAGGATCTCCTCAGAACCTAGGCCCATaGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTGTTCACAGT | + |
Preference number: 1 (lower is better) Translates to: PIPRPSRGSPQNLGP*LPLEQDSSQFTVHS Trigger: ACTGTGAACAGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGGAGATCCTCTACTGGGTCTGGGAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CCA 90 bp | CAGCCTCCATGGCCTCAGAGGCAAACCCAGGCCACCTGTGTTCTCTaGTTCTTCTACCCAGAACCAGGAAATCACACCATCCTTCACCTA | + |
Preference number: 1 (lower is better) Translates to: QPPWPQRQTQATCVL*FFYPEPGNHTILHL Trigger: TAGGTGAAGGATGGTGTGATTTCCTGGTTCTGGGTAGAAGAACCAGAGAACACAGGTGGCCTGGGTTTGCCTCTGAGGCCATGGAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 90 bp | ATGAGCTTCGAGCTGTGGCAAGCCCTAGCTAATCAGCTGTGGCCTTaGGATGGCTTCTTTATGCAGACAAGAGTGGCACTGCTGAGCCAC | + |
Preference number: 1 (lower is better) Translates to: MSFELWQALANQLWP*DGFFMQTRVALLSH Trigger: GTGGCTCAGCAGTGCCACTCTTGTCTGCATAAAGAAGCCATCTCAAGGCCACAGCTGATTAGCTAGGGCTTGCCACAGCTCGAAGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 90 bp | AAGACACAGGGCATGTCTCGAAATGTGTCTATTGTTAATCCATGCTaGCTGTGCCTGGGGTCAGAGCCTGGGCTTAAGGAAAAGGACACT | + |
Preference number: 1 (lower is better) Translates to: KTQGMSRNVSIVNPC*LCLGSEPGLKEKDT Trigger: AGTGTCCTTTTCCTTAAGCCCAGGCTCTGACCCCAGGCACAGTCAGCATGGATTAACAATAGACACATTTCGAGACATGCCCTGTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR GCA 90 bp | GTGTACTATCAAGCCAGACAGGTCTGGTCTTCTTCAGAGATGCCCTaGCTGCGACTAACACAAGCAACATTCATCCTAAACATGAGAGAG | + |
Preference number: 1 (lower is better) Translates to: VYYQARQVWSSSEMP*LRLTQATFILNMRE Trigger: CTCTCTCATGTTTAGGATGAATGTTGCTTGTGTTAGTCGCAGGCAGGGCATCTCTGAAGAAGACCAGACCTGTCTGGCTTGATAGTACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 90 bp | GACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCTAGGTaGAAAAGTGCAGTTGTGTCCTACGTCTTGGGCCTCACATCTACC | + |
Preference number: 1 (lower is better) Translates to: DIHSYHIPRLGYFPR*KSAVVSYVLGLTST Trigger: GGTAGATGTGAGGCCCAAGACGTAGGACACAACTGCACTTTTCCACCTAGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 90 bp | CCCAAGAGTGAAATAAATAAGACACAGTGCAATGGCTCTAGGCATTaGGGTAAAAAGGCACATTACACAGAGTCCCTTGGAGAAAATCCA | + |
Preference number: 1 (lower is better) Translates to: PKSEINKTQCNGSRH*GKKAHYTESLGENP Trigger: TGGATTTTCTCCAAGGGACTCTGTGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCACTGTGTCTTATTTATTTCACTCTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 90 bp | TCCGTACGTCCTCTCTCACTCTCCAGTGATTTTAATCTCACCCTCTaGTCTGAGAAACTACAACCCACATGTACTGACTACATTTTTATT | + |
Preference number: 1 (lower is better) Translates to: SVRPLSLSSDFNLTL*SEKLQPTCTDYIFI Trigger: AATAAAAATGTAGTCAGTACATGTGGGTTGTAGTTTCTCAGACCAGAGGGTGAGATTAAAATCACTGGAGAGTGAGAGAGGACGTACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 90 bp | TCAAGAGCCCTTCAGAAGCCAAAGTTAACAAACAGGCACTTGAGTTaGAAAAACAAATGTAGTCTTGAAAACACTGAAGTAGCCACCTGT | + |
Preference number: 1 (lower is better) Translates to: SRALQKPKLTNRHLS*KNKCSLENTEVATC Trigger: ACAGGTGGCTACTTCAGTGTTTTCAAGACTACATTTGTTTTTCCAACTCAAGTGCCTGTTTGTTAACTTTGGCTTCTGAAGGGCTCTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 90 bp | ATATTAAGTCTTTTATTGCCAGTCCTTCACACCATGCTCATCACGTaGCTCAAGAATTTATCCATCTTCCCTTGGGTAATACAGTCGTCT | + |
Preference number: 1 (lower is better) Translates to: ILSLLLPVLHTMLIT*LKNLSIFPWVIQSS Trigger: AGACGACTGTATTACCCAAGGGAAGATGGATAAATTCTTGAGTCACGTGATGAGCATGGTGTGAAGGACTGGCAATAAAAGACTTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR TCA 90 bp | CCAGAGCGCCAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTCAAGAGTGGCACTGCTaGGCCACCCACTGTGGCCTC | + |
Preference number: 2 (lower is better) Translates to: PERQASSHLSHRAPPALTQEWHC*ATHCGL Trigger: GAGGCCACAGTGGGTGGCTCAGCAGTGCCACTCTTG...AGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTGGCGCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR TCA 90 bp | GGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCAGGAAAGAGGTAGGATaGGCTTCGAGCTGTGGCAAG | + |
Preference number: 2 (lower is better) Translates to: GTASEFVHTVQTCAETTPRKEVG*ASSCGK Trigger: CTTGCCACAGCTCGAAGCTCATCCTACCTCTTTCCT...GGGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR GCA 90 bp | CAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGAACCGCATCCCATTCCCACTGTaGTTTGTGCCATGTCCCCTA | + |
Preference number: 2 (lower is better) Translates to: QPHTPTDPPSNSPLPWNRIPFPL*FVPCPL Trigger: TAGGGGACATGGCACAAAGCACAGTGGGAATGGGAT...GCGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR GCA 90 bp | CCTCCGACTCCTGGGAGCTCTGTTCCATTCTTAGGCAATTCTCCTTGTGAGTCTCCAACCTCAGCTCCCTaGAGCCTCCATGGCCTCAGA | + |
Preference number: 2 (lower is better) Translates to: PPTPGSSVPFLGNSPCESPTSAP*SLHGLR Trigger: TCTGAGGCCATGGAGGCTGCAGGGAGCTGAGGTTGG...AGACTCACAAGGAGAATTGCCTAAGAATGGAACAGAGCTCCCAGGAGTCGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CCA 90 bp | AGGGGTGGCACAGGACTGCTTTACTCTGCTAACCCAAGCCAGCCAATGGCTGCGGTTTCCTGGCAACGCTaGGGGAAGTGTACTATCAAG | + |
Preference number: 2 (lower is better) Translates to: RGGTGLLYSANPSQPMAAVSWQR*GKCTIK Trigger: CTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAAC...CGCAGCCATTGGCTGGCTTGGGTTAGCAGAGTAAAGCAGTCCTGTGCCACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR-3UTR CCA 90 bp | CCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTCTGAGCCACCCACTGTaGCCTCCCACACTAGGCATT | + |
Preference number: 2 (lower is better) Translates to: PVSQSSTSIDCQVPLSPSLSHPL*PPTLGI Trigger: AATGCCTAGTGTGGGAGGCCACAGTGGGTGGCTCAG...ACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CCA 90 bp | GCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGACCACATCCCACGACTTaGTTATTTTCCCAGAGCGCC | + |
Preference number: 2 (lower is better) Translates to: AISLTHPLIHPQIPLFPGPHPTT*LFSQSA Trigger: GGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGG...TCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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3UTR CAA 90 bp | AAGCCAGCCAATGGCTGCGCCATCCCGACGCCACTAACAGTCTTTTaGTTAGTGTCACGCTTCCTGGTTGACAAGGATCCTCAGCCTCAT | + |
Preference number: 2 (lower is better) Translates to: KPANGCAIPTPLTVF*LVSRFLVDKDPQPH Trigger: ATGAGGCTGAGGATCCTTGTCAACCAGGAAGCGTGACACTAACAAAAAGACTGTTAGTGGCGTCGGGATGGCGCAGCCATTGGCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CAA 90 bp | ACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTaGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGA | + |
Preference number: 2 (lower is better) Translates to: TSLHGLCISSCFLTC*SSSPDFLGDEQQCG Trigger: TCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR TCA 90 bp | AGGGGTGGCACAGGACTGCTTTACTCTGCTAACCCAAGCCAGCCAATGGCTGCGGCAAGAAAGAAAAGATaGGTAGTGAGCCGTGGTGTT | + |
Preference number: 2 (lower is better) Translates to: RGGTGLLYSANPSQPMAAARKKR*VVSRGV Trigger: AACACCACGGCTCACTACTCATCTTTTCTTTCTTGC...CGCAGCCATTGGCTGGCTTGGGTTAGCAGAGTAAAGCAGTCCTGTGCCACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR-3UTR TCA 90 bp | AAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACTCTGCGAGCTCCACCAGCATTaGCTGCCAAGTTCCTTTGTC | + |
Preference number: 2 (lower is better) Translates to: KGHCWLGHEGWHRTALLCELHQH*LPSSFV Trigger: GACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTC...GCAGAGTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CCA 90 bp | AAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACTCTGCAATTCCCCTCTTCCCTaGAACCGCCTCCGAGTTTGT | + |
Preference number: 2 (lower is better) Translates to: KGHCWLGHEGWHRTALLCNSPLP*NRLRVC Trigger: ACAAACTCGGAGGCGGTTCCAGGGAAGAGGGGAATT...GCAGAGTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTaGGTTATTTTCCCAGAGCGCCAGGCCAGTAGTCACCTGTCTCAC | + |
Preference number: 2 (lower is better) Translates to: RILSLMTYILTTSHD*VIFPERQASSHLSH Trigger: GTGAGACAGGTGACTACTGGCCTGGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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3UTR-3UTR TCA 90 bp | TGCAATGGCTCTAGGCATTGGGGTAAAAAGGCACATTACACAGAGTCCCTTGGAGTCACGCTTCCTGGTTaGCAAGGATCCTCAGCCTCA | + |
Preference number: 2 (lower is better) Translates to: CNGSRHWGKKAHYTESLGVTLPG*QGSSAS Trigger: TGAGGCTGAGGATCCTTGTCAACCAGGAAGCGTGAC...TCCAAGGGACTCTGTGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CCA 90 bp | AAGGAAAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACGCTGTGGCCTTGAGATaGCTTCTTTATGCAGACAAG | + |
Preference number: 2 (lower is better) Translates to: KEKDTVGLDMRGGTGLLYAVALR*LLYADK Trigger: CTTGTCTGCATAAAGAAGCCATCTCAAGGCCACAGC...GTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CCA 90 bp | ACTGTTGGGGCTTTAACAAGCCCAGAGGAGGCGCATTATAGATGGTCTGTCACAGTTTCCTGGCAACGCTaGGGGAAGTGTACTATCAAG | + |
Preference number: 2 (lower is better) Translates to: TVGALTSPEEAHYRWSVTVSWQR*GKCTIK Trigger: CTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAAC...TGTGACAGACCATCTATAATGCGCCTCCTCTGGGCTTGTTAAAGCCCCAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR TCA 90 bp | CAGCAATGTGGAAGTGTAAGCAGAATAACCCTTTCCTCCCCAACTGCTTCTTGGGCAAGAAAGAAAAGATaGGTAGTGAGCCGTGGTGTT | + |
Preference number: 2 (lower is better) Translates to: QQCGSVSRITLSSPTASWARKKR*VVSRGV Trigger: AACACCACGGCTCACTACTCATCTTTTCTTTCTTGC...CCAAGAAGCAGTTGGGGAGGAAAGGGTTATTCTGCTTACACTTCCACATTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTaGGTTATTTTCCTAGGTGGAAAAGTGCAGTTGTGTCCTACGTCT | + |
Preference number: 2 (lower is better) Translates to: RILSLMTYILTTSHD*VIFLGGKVQLCPTS Trigger: AGACGTAGGACACAACTGCACTTTTCCACCTAGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 90 bp | ATGACTTGCTCACTAAGTACTAGGCATTGGGACTTTGGCTCTAGATaGTATCCAATGTCACATGCCATGCAACAGCCAGCTACAGATAAC | + |
Preference number: 2 (lower is better) Translates to: MTCSLSTRHWDFGSR*YPMSHAMQQPATDN Trigger: GTTATCTGTAGCTGGCTGTTGCATGGCATGTGACATTGGATACAATCTAGAGCCAAAGTCCCAATGCCTAGTACTTAGTGAGCAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR GCA 90 bp | GAACAGGCTGTTCTATTACAAACTGCTTCTAAAGCTTCCTGCTTAGATAGCCAGTCCACCAGCATTGACTaGCAAGTTCCTTTGTCTCCT | + |
Preference number: 2 (lower is better) Translates to: EQAVLLQTASKASCLDSQSTSID*QVPLSP Trigger: AGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGA...CTGGCTATCTAAGCAGGAAGCTTTAGAAGCAGTTTGTAATAGAACAGCCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR GCA 90 bp | ACTGTTGGGGCTTTAACAAGCCCAGAGGAGGCGCATTATAGATGGTCTGTCACAATAACCTTGTTATTTTaGACACTCCATGATGTTCAC | + |
Preference number: 2 (lower is better) Translates to: TVGALTSPEEAHYRWSVTITLLF*TLHDVH Trigger: GTGAACATCATGGAGTGTGCAAAATAACAAGGTTAT...TGTGACAGACCATCTATAATGCGCCTCCTCTGGGCTTGTTAAAGCCCCAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 90 bp | CTGTTTTATGCTGTCTCTCAAGAGGGTCAATTCCAAATTTGTCGGTaGTATAGAGATCATAGTGGATCACCTTTTTCACTGTCTTGGGAT | + |
Preference number: 2 (lower is better) Translates to: LFYAVSQEGQFQICR*YRDHSGSPFSLSWD Trigger: ATCCCAAGACAGTGAAAAAGGTGATCCACTATGATCTCTATACAACCGACAAATTTGGAATTGACCCTCTTGAGAGACAGCATAAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR GCA 72 bp | CGTCTTGGGCCTCACATCTACCCAACCTCAGCTCCCTaGAGCCTCCATGGCCTCAGAGGCAAACCCAGGCCA | + |
Preference number: 3 (lower is better) Translates to: RLGPHIYPTSAP*SLHGLRGKPRP Trigger: TGGCCTGGGTTTGCCTCTGAGGCCATGGAGGCTGCAGGGAGCTGAGGTTGGGTAGATGTGAGGCCCAAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CAA 90 bp | AAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACGCCCATGGCTTCCCCTaGAGCAGGACTCTTCACAGT | + |
Preference number: 3 (lower is better) Translates to: KPVKNIPPWPLHQLLLPDAHGFP*SRTLHS Trigger: ACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGC...GTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | ACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTaGAACCGCCTCCGAGTTTGTACACACAGTCCAGAC | + |
Preference number: 3 (lower is better) Translates to: TPTDPPSNSPLP*NRLRVCTHSPD Trigger: GTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR-3UTR CAA 90 bp | AAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACTCTGCGGTGGAAAAGTGCAGTaGTGTCCTACGTCTTGGGCC | + |
Preference number: 3 (lower is better) Translates to: KGHCWLGHEGWHRTALLCGGKVQ*CPTSWA Trigger: GGCCCAAGACGTAGGACACAACTGCACTTTTCCACC...GCAGAGTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 72 bp | GAGTCTAGACCATTGCAATCAGCCTCACACACCCACTaGTCCACCCTCAAATTCCCCTCTTCCCTGGAACCG | + |
Preference number: 3 (lower is better) Translates to: ESRPLQSASHTH*STLKFPSSLEP Trigger: CGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR GCA 72 bp | CTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTaGTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAA | + |
Preference number: 3 (lower is better) Translates to: LHGLCISSCFLT*LSSSPDFLGDE Trigger: TTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | AGACCCAGTAGAGGATCTCCTCAGAACCTAGGCCCATaGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACT | + |
Preference number: 3 (lower is better) Translates to: RPSRGSPQNLGP*LPLEQDSSQFT Trigger: AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGGAGATCCTCTACTGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CCA 72 bp | CAGGACTGCTTTACTCTGCTAACCCAAGCCAGCCAATaGCTGCGCCATCCCGACGCCACTAACAGTCTTTTT | + |
Preference number: 3 (lower is better) Translates to: QDCFTLLTQASQ*LRHPDATNSLF Trigger: AAAAAGACTGTTAGTGGCGTCGGGATGGCGCAGCCATTGGCTGGCTTGGGTTAGCAGAGTAAAGCAGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR TCA 72 bp | GAGCTGTGGCAAGCCCTAGCTAATCAGCTGTGGCCTTaGGATGGCTTCTTTATGCAGACAAGAGTGGCACTG | + |
Preference number: 3 (lower is better) Translates to: ELWQALANQLWP*DGFFMQTRVAL Trigger: CAGTGCCACTCTTGTCTGCATAAAGAAGCCATCTCAAGGCCACAGCTGATTAGCTAGGGCTTGCCACAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 72 bp | CTGGGCTTAAGGAAAAGGACACTGTTGGCTTGGACATaGGGGGTGGCACAGGACTGCTTTACTCTGCTAACC | + |
Preference number: 3 (lower is better) Translates to: LGLRKRTLLAWT*GVAQDCFTLLT Trigger: GGTTAGCAGAGTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTTTCCTTAAGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | TGTAAGGGATTTCCTCAATTAGTGATCAAGGGGGAATaGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTA | + |
Preference number: 3 (lower is better) Translates to: CKGFPQLVIKGE*PLVGGTISGLV Trigger: TACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCATTCCCCCTTGATCACTAATTGAGGAAATCCCTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 72 bp | GGCATGTCTCGAAATGTGTCTATTGTTAATCCATGCTaGCTGTGCCTGGGGTCAGAGCCTGGGCTTAAGGAA | + |
Preference number: 3 (lower is better) Translates to: GMSRNVSIVNPC*LCLGSEPGLKE Trigger: TTCCTTAAGCCCAGGCTCTGACCCCAGGCACAGTCAGCATGGATTAACAATAGACACATTTCGAGACATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR GCA 72 bp | TCAGTGAAAAGCCGTGGAAGCTGCAGGTCCCGTTCCTaGTTTGTCATGTTTGTCTGTGCTTCCCACTTTGAT | + |
Preference number: 3 (lower is better) Translates to: SVKSRGSCRSRS*FVMFVCASHFD Trigger: ATCAAAGTGGGAAGCACAGACAAACATGACAAAGCAGGAACGGGACCTGCAGCTTCCACGGCTTTTCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR GCA 72 bp | CTTCACAATGAGCTGTCAGTGAAAAGCCGTGGAAGCTaGAGGTCCCGTTCCTGCTTTGTCATGTTTGTCTGT | + |
Preference number: 3 (lower is better) Translates to: LHNELSVKSRGS*RSRSCFVMFVC Trigger: ACAGACAAACATGACAAAGCAGGAACGGGACCTGCAGCTTCCACGGCTTTTCACTGACAGCTCATTGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | TCTTACCACATCCCACGACTTGGTTATTTTCCTAGGTaGAAAAGTGCAGTTGTGTCCTACGTCTTGGGCCTC | + |
Preference number: 3 (lower is better) Translates to: SYHIPRLGYFPR*KSAVVSYVLGL Trigger: GAGGCCCAAGACGTAGGACACAACTGCACTTTTCCACCTAGGAAAATAACCAAGTCGTGGGATGTGGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | GAAATGTGTCTATTGTTAATCCATGCTGACTGTGCCTaGGGTCAGAGCCTGGGCTTAAGGAAAAGGACACTG | + |
Preference number: 3 (lower is better) Translates to: EMCLLLIHADCA*GQSLGLRKRTL Trigger: CAGTGTCCTTTTCCTTAAGCCCAGGCTCTGACCCCAGGCACAGTCAGCATGGATTAACAATAGACACATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CAA 90 bp | CGTCCTCTCTCACTCTCCAGTGATTTTAATCTCACCCTCTGGTCTGAGAAACTACGAACGGGGTCTTCTTaGAGGGGTTTGTTTCCAGAT | + |
Preference number: 3 (lower is better) Translates to: RPLSLSSDFNLTLWSEKLRTGSS*RGLFPD Trigger: ATCTGGAAACAAACCCCTCAAAGAAGACCCCGTTCG...TAGTTTCTCAGACCAGAGGGTGAGATTAAAATCACTGGAGAGTGAGAGAGGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CAA 90 bp | GGCACATTACACAGAGTCCCTTGGAGAAAATCCAGGCCACGCTCCATCCTCTCCTTCCAAATTTGTCGGTaGTATAGAGATCATAGTGGA | + |
Preference number: 3 (lower is better) Translates to: GTLHRVPWRKSRPRSILSFQICR*YRDHSG Trigger: TCCACTATGATCTCTATACAACCGACAAATTTGGAA...GGAGAGGATGGAGCGTGGCCTGGATTTTCTCCAAGGGACTCTGTGTAATGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR-3UTR CAA 90 bp | CCTCCGACTCCTGGGAGCTCTGTTCCATTCTTAGGCAATTCTCCTTGTGAGTCTAGTGATGTCATAACCTaGTTATTTTGCACACTCCAT | + |
Preference number: 3 (lower is better) Translates to: PPTPGSSVPFLGNSPCESSDVIT*LFCTLH Trigger: ATGGAGTGTGCAAAATAACAAGGTTATGACATCACT...AGACTCACAAGGAGAATTGCCTAAGAATGGAACAGAGCTCCCAGGAGTCGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | CCTCTCTCACTCTCCAGTGATTTTAATCTCACCCTCTaGTCTGAGAAACTACAACCCACATGTACTGACTAC | + |
Preference number: 3 (lower is better) Translates to: PLSLSSDFNLTL*SEKLQPTCTDY Trigger: GTAGTCAGTACATGTGGGTTGTAGTTTCTCAGACCAGAGGGTGAGATTAAAATCACTGGAGAGTGAGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR GCA 72 bp | CAGGCTGTTCTATTACAAACTGCTTCTAAAGCTTCCTaGTTAGATAGCCAGTACAAAGCTCAGGCATGGCAT | + |
Preference number: 3 (lower is better) Translates to: QAVLLQTASKAS*LDSQYKAQAWH Trigger: ATGCCATGCCTGAGCTTTGTACTGGCTATCTAAGCAGGAAGCTTTAGAAGCAGTTTGTAATAGAACAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | GAAATAAATAAGACACAGTGCAATGGCTCTAGGCATTaGGGTAAAAAGGCACATTACACAGAGTCCCTTGGA | + |
Preference number: 3 (lower is better) Translates to: EINKTQCNGSRH*GKKAHYTESLG Trigger: TCCAAGGGACTCTGTGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCACTGTGTCTTATTTATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR TCA 72 bp | CTTTTATTGCCAGTCCTTCACACCATGCTCATCACGTaGCTCAAGAATTTATCCATCTTCCCTTGGGTAATA | + |
Preference number: 3 (lower is better) Translates to: LLLPVLHTMLIT*LKNLSIFPWVI Trigger: TATTACCCAAGGGAAGATGGATAAATTCTTGAGTCACGTGATGAGCATGGTGTGAAGGACTGGCAATAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CCA 72 bp | TATAGAGATCATAGTGGATCACCTTTTTCACTGTCTTaGGATCTTCCAATGACTCTTGACCTAAAGCAACAA | + |
Preference number: 3 (lower is better) Translates to: YRDHSGSPFSLS*DLPMTLDLKQQ Trigger: TTGTTGCTTTAGGTCAAGAGTCATTGGAAGATCCCAAGACAGTGAAAAAGGTGATCCACTATGATCTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | TGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCTGGGCAGAGGTGGCTCTCTaGAGGGCAGGGTGGGCGCTG | + |
Preference number: 4 (lower is better) Translates to: WCFLATLGEVYYQARQVWAEVAL*RAGWAL Trigger: CAGCGCCCACCCTGCCCTTCAGAGAGCCACCTCTGC...CCAGACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | GGGGTCTTGCTCTTGCATCACACTGTTGGGGCTTTAACAAGCCCAGAGGAGGCGCCTTCTGGTACGCCTTaGCCAGCAGCAGGGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: GVLLLHHTVGALTSPEEAPSGTP*PAAGPG Trigger: ACCAGGCCCTGCTGCTGGTCAAGGCGTACCAGAAGG...CGCCTCCTCTGGGCTTGTTAAAGCCCCAACAGTGTGATGCAAGAGCAAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | CTTCCCTGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCCTGGAAGGAGTGGCTaGGTGGTGGAGGGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: LPWNRLRVCTHSPDLCRDPGRSG*VVEGGS Trigger: GCTTCCACCCTCCACCACTCAGCCACTCCTTCCAGG...GTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | AGGGGTGGCACAGGACTGCTTTACTCTGCTAACCCAAGCCAGCCAATGGCTGCGGGCGGAGCTGACTGCTaGTCTGGCCTAGTGTGTGCT | + |
Preference number: 4 (lower is better) Translates to: RGGTGLLYSANPSQPMAAGGADC*SGLVCA Trigger: AGCACACACTAGGCCAGAGCAGCAGTCAGCTCCGCC...CGCAGCCATTGGCTGGCTTGGGTTAGCAGAGTAAAGCAGTCCTGTGCCACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CTTCCCTGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCTGCAGGCTGTCTCCTaGAGCCCTCGAAGGAACCTG | + |
Preference number: 4 (lower is better) Translates to: LPWNRLRVCTHSPDLCRDLQAVS*SPRRNL Trigger: CAGGTTCCTTCGAGGGCTGCAGGAGACAGCCTGCAG...GTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | GGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCGAAGGAGTGGCTGAGTaGTGGAGGGTGGAAGCACCT | + |
Preference number: 4 (lower is better) Translates to: GTASEFVHTVQTCAETTPEGVAE*WRVEAP Trigger: AGGTGCTTCCACCCTCCACCACTCAGCCACTCCTTC...GGGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTGGAAGTCCGGCTCTaGGACGTGGTGATGAGGCAG | + |
Preference number: 4 (lower is better) Translates to: QASSHLSHRAPPALTAKFLEVRL*DVVMRQ Trigger: CTGCCTCATCACCACGTCTCAGAGCCGGACTTCCAG...GAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | GGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCGAGTCCCAGTCCCGTTaGTGTTGCTTGACACCTGGT | + |
Preference number: 4 (lower is better) Translates to: GTASEFVHTVQTCAETTPESQSR*CCLTPG Trigger: ACCAGGTGTCAAGCAACATCAACGGGACTGGGACTC...GGGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | GGGGTCTTGCTCTTGCATCACACTGTTGGGGCTTTAACAAGCCCAGAGGAGGCGTCCCTGTCTGGCCTCTaGGCTCCTTCTCACTGGGAA | + |
Preference number: 4 (lower is better) Translates to: GVLLLHHTVGALTSPEEASLSGL*APSHWE Trigger: TTCCCAGTGAGAAGGAGCTCAGAGGCCAGACAGGGA...CGCCTCCTCTGGGCTTGTTAAAGCCCCAACAGTGTGATGCAAGAGCAAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | CCGTGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCGCAGCAGAGCCATGGTaGTCTCTGCCCTTCGTAGCA | + |
Preference number: 4 (lower is better) Translates to: PWCFLATLGEVYYQARQVAAEPW*SLPFVA Trigger: TGCTACGAAGGGCAGAGAGCACCATGGCTCTGCTGC...GACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | GTAGTGAGCCGTGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGGCGGAGCTGACTGCTaGTCTGGCCTAGTGTGTGCT | + |
Preference number: 4 (lower is better) Translates to: VVSRGVSWQRWGKCTIKPGGADC*SGLVCA Trigger: AGCACACACTAGGCCAGAGCAGCAGTCAGCTCCGCC...TGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCACGGCTCACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CTGCAGCCTCCATGGCCTCAGAGGCAAACCCAGGCCACCTGTGTTCTCTGGTTCCAGGACTCTCTGACTTaGAAGAGGCCTCATCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LQPPWPQRQTQATCVLWFQDSLT*KRPHLL Trigger: GAGCAGATGAGGCCTCTTCCAAGTCAGAGAGTCCTG...GAACCAGAGAACACAGGTGGCCTGGGTTTGCCTCTGAGGCCATGGAGGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | AGTGGCACTGCTGAGCCACCCACTGTGGCCTCCCACACTAGGCATTCTGTAAGGGGCCAGACTGCACAATaGTTGCCACACCAGGCTTCT | + |
Preference number: 4 (lower is better) Translates to: SGTAEPPTVASHTRHSVRGQTAQ*LPHQAS Trigger: AGAAGCCTGGTGTGGCAACCATTGTGCAGTCTGGCC...CCTTACAGAATGCCTAGTGTGGGAGGCCACAGTGGGTGGCTCAGCAGTGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | GGGGGAATGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCCACTGCATGACGAGTTaGTTAAACTGTGGGAGCTCG | + |
Preference number: 4 (lower is better) Translates to: GGMAPCGWDHLWAGSLGFHCMTS*LNCGSS Trigger: CGAGCTCCCACAGTTTAACCAACTCGTCATGCAGTG...GAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCATTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | TTATTTTCCCAGAGCGCCAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGAGACCCTGGAAGGAGTaGCTGAGTGGTGGAGGGTGG | + |
Preference number: 4 (lower is better) Translates to: LFSQSARPVVTCLTELHQRPWKE*LSGGGW Trigger: CCACCCTCCACCACTCAGCCACTCCTTCCAGGGTCT...CTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTGGCGCTCTGGGAAAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTCCGACTCCTGGGAGCTCTGTTCCATTCTTAGGCAATTCTCCTTGTGAGTCTGAGCTGGGTGGGCTCTaGGGCTGGAAGCCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: PPTPGSSVPFLGNSPCESELGGL*GWKPGV Trigger: GACTCCTGGCTTCCAGCCCCAGAGCCCACCCAGCTC...AGACTCACAAGGAGAATTGCCTAAGAATGGAACAGAGCTCCCAGGAGTCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | GTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTCTGGAGCTGGGTGGGCTCTaGGGCTGGAAGCCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: VSQSSTSIDCQVPLSPSLELGGL*GWKPGV Trigger: GACTCCTGGCTTCCAGCCCCAGAGCCCACCCAGCTC...CAGACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CCTCAGAACCTAGGCCCATGGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTAAAGAGTATGTGTGTTaGTGCGGGCCAGCCGCTCCC | + |
Preference number: 4 (lower is better) Translates to: PQNLGPWLPLEQDSSQFTKEYVC*CGPAAP Trigger: GGGAGCGGCTGGCCCGCATCAACACACATACTCTTT...AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CCGTGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCGAGTCCCAGTCCCGTTaGTGTTGCTTGACACCTGGT | + |
Preference number: 4 (lower is better) Translates to: PWCFLATLGEVYYQARQVESQSR*CCLTPG Trigger: ACCAGGTGTCAAGCAACATCAACGGGACTGGGACTC...GACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | AACCTCAGCTCCCTGCAGCCTCCATGGCCTCAGAGGCAAACCCAGGCCACCTGTCCTTCTCACTGGGAATaGTGGGGTGGTATAACTGAA | + |
Preference number: 4 (lower is better) Translates to: NLSSLQPPWPQRQTQATCPSHWE*WGGITE Trigger: TTCAGTTATACCACCCCATCATTCCCAGTGAGAAGG...ACAGGTGGCCTGGGTTTGCCTCTGAGGCCATGGAGGCTGCAGGGAGCTGAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | TGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCCCTGGATCTCCTTCTaGAGTTCTGGCTCCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: WNRLRVCTHSPDLCRDHTPWISF*SSGSFW Trigger: CCAGAAGGAGCCAGAACTGCAGAAGGAGATCCAGGG...GGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | GGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCGACTCAGTTCGTGGGTaGTTCTGGCCACAAAAGGGT | + |
Preference number: 4 (lower is better) Translates to: GTASEFVHTVQTCAETTPDSVRG*FWPQKG Trigger: ACCCTTTTGTGGCCAGAAGCACCCACGAACTGAGTC...GGGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | GGCACATTACACAGAGTCCCTTGGAGAAAATCCAGGCCACGCTCCATCCTCTCCGCCCCTCTGTCCGTTTaGTTCCACCAGGCTCCATTC | + |
Preference number: 4 (lower is better) Translates to: GTLHRVPWRKSRPRSILSAPLSV*FHQAPF Trigger: GAATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGC...GGAGAGGATGGAGCGTGGCCTGGATTTTCTCCAAGGGACTCTGTGTAATGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | CCAGAGCGCCAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTCGAAGGTCCAGCTTGTaGCATGGCAGCTTCGATGAT | + |
Preference number: 4 (lower is better) Translates to: PERQASSHLSHRAPPALTRRSSL*HGSFDD Trigger: ATCATCGAAGCTGCCATGCCACAAGCTGGACCTTCG...AGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTGGCGCTCTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | CAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGAACCGCCACAGAGACACCCACTaGAATCTCTCCTCCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: QPHTPTDPPSNSPLPWNRHRDTH*NLSSRS Trigger: TGACCTGGAGGAGAGATTCCAGTGGGTGTCTCTGTG...GCGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTCAGAACCTAGGCCCATGGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTGACCAGCCAGGGCTCTaGCCAGACTGCACAATGGTT | + |
Preference number: 4 (lower is better) Translates to: PQNLGPWLPLEQDSSQFTDQPGL*PDCTMV Trigger: AACCATTGTGCAGTCTGGCCAGAGCCCTGGCTGGTC...AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | TGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCTCGGCGAGGTCTCTCTaGAGGACCACAAATGTGCAC | + |
Preference number: 4 (lower is better) Translates to: WNRLRVCTHSPDLCRDHTSARSL*RTTNVH Trigger: GTGCACATTTGTGGTCCTCCAGAGAGACCTCGCCGA...GGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCTGGTCTTCTTCGAAGGAGTGGCTGAGTaGTGGAGGGTGGAAGCACCT | + |
Preference number: 4 (lower is better) Translates to: PGNAGGSVLSSQTGLVFFEGVAE*WRVEAP Trigger: AGGTGCTTCCACCCTCCACCACTCAGCCACTCCTTC...GAAGAAGACCAGACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTAGAAGGGCCACGATTTaGCCCCGCAGCAGGGTCAGG | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPRRATI*PRSRVR Trigger: CCTGACCCTGCTGCGGGGCCAAATCGTGGCCCTTCT...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | AAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACTCTGCGGTGGGCTCTGGGGCTaGAAGCCAGGAGTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: KGHCWLGHEGWHRTALLCGGLWG*KPGVFM Trigger: CATGAAGACTCCTGGCTTCCAGCCCCAGAGCCCACC...GCAGAGTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | AGGGGTGGCACAGGACTGCTTTACTCTGCTAACCCAAGCCAGCCAATGGCTGCGCACCTGACTCATGGTTaGGACAGTGGGAACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: RGGTGLLYSANPSQPMAAHLTHG*DSGNRE Trigger: CTCTCTGTTCCCACTGTCCCAACCATGAGTCAGGTG...CGCAGCCATTGGCTGGCTTGGGTTAGCAGAGTAAAGCAGTCCTGTGCCACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CAA 72 bp | CCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTaGGGTTCTATAAGAGAGCAGGCTAAGCAAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: PLVGGTISGLVV*GSIREQAKQAR Trigger: CCTGGCTTGCTTAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | AAAAGCCGTGGAAGCTGCAGGTCCCGTTCCTGCTTTGTCATGTTTGTCTGTGCTCTGATGGCCAGCCTCTaGTGGAGCAGCGATCTGTCC | + |
Preference number: 4 (lower is better) Translates to: KSRGSCRSRSCFVMFVCALMASL*WSSDLS Trigger: GGACAGATCGCTGCTCCATCAGAGGCTGGCCATCAG...AGCACAGACAAACATGACAAAGCAGGAACGGGACCTGCAGCTTCCACGGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGCAGAGGTGGCTCTCTaGAGGGCAGGGTGGGCGCTG | + |
Preference number: 4 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLAEVAL*RAGWAL Trigger: CAGCGCCCACCCTGCCCTTCAGAGAGCCACCTCTGC...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | AAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCCAATCAGGTGCGCTTaGTCCTCTTCCCTGCAGGCT | + |
Preference number: 4 (lower is better) Translates to: KPVKNIPPWPLHQLLLPDPIRCA*SSSLQA Trigger: AGCCTGCAGGGAAGAGGAGCAAGCGCACCTGATTGG...GTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | CCTCAGAACCTAGGCCCATGGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTGTGGGCGCTGGCATCTaGAGGTGTGTTCTCCAGAAT | + |
Preference number: 4 (lower is better) Translates to: PQNLGPWLPLEQDSSQFTVGAGI*RCVLQN Trigger: ATTCTGGAGAACACACCTGCAGATGCCAGCGCCCAC...AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CCTCAGAACCTAGGCCCATGGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTGGAGGACCACAAATGTaGACAGGATCTGACCCAGCC | + |
Preference number: 4 (lower is better) Translates to: PQNLGPWLPLEQDSSQFTGGPQM*TGSDPA Trigger: GGCTGGGTCAGATCCTGTGCACATTTGTGGTCCTCC...AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGAGGCCAGACTGCACAATaGTTGCCACACCAGGCTTCT | + |
Preference number: 4 (lower is better) Translates to: AISLTHPLIHPQIPLFPGGQTAQ*LPHQAS Trigger: AGAAGCCTGGTGTGGCAACCATTGTGCAGTCTGGCC...TCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGACTGGTGTTCAGACCCTaGAAGGAGTGGCTGAGTGGT | + |
Preference number: 4 (lower is better) Translates to: AISLTHPLIHPQIPLFPGLVFRP*KEWLSG Trigger: ACCACTCAGCCACTCCTTCCAGGGTCTGAACACCAG...TCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | TGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCACCTGACTCATGGTTaGGACAGTGGGAACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: WNRLRVCTHSPDLCRDHTHLTHG*DSGNRE Trigger: CTCTCTGTTCCCACTGTCCCAACCATGAGTCAGGTG...GGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CAA 72 bp | CTCAAATTCCCCTCTTCCCTGGAACCGCCTCCGAGTTaGTACACACAGTCCAGACCTGTGCAGAGACCACAC | + |
Preference number: 4 (lower is better) Translates to: LKFPSSLEPPPS*YTQSRPVQRPH Trigger: GTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAGAGGGGAATTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | AAGGAAAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACCTGTCCTCAGAGCCCTaGTCTTCCTGCTCAGGACTC | + |
Preference number: 4 (lower is better) Translates to: KEKDTVGLDMRGGTGLLYLSSEP*SSCSGL Trigger: GAGTCCTGAGCAGGAAGATCAGGGCTCTGAGGACAG...GTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | CCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTTCCCTGTCTGGCCTCTaGGCTCCTTCTCACTGGGAA | + |
Preference number: 4 (lower is better) Translates to: PVSQSSTSIDCQVPLSPSSLSGL*APSHWE Trigger: TTCCCAGTGAGAAGGAGCTCAGAGGCCAGACAGGGA...ACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CTCTGCATGTCTAGGGCAGAGGTCCTCAGCGTGGCTGCGTGTGAGATTCACCTGAGACTGCACAATGGTTaGCACACCAGGCTTCTTAAC | + |
Preference number: 4 (lower is better) Translates to: LCMSRAEVLSVAACEIHLRLHNG*HTRLLN Trigger: GTTAAGAAGCCTGGTGTGGCAACCATTGTGCAGTCT...CAGGTGAATCTCACACGCAGCCACGCTGAGGACCTCTGCCCTAGACATGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | TGCAATGGCTCTAGGCATTGGGGTAAAAAGGCACATTACACAGAGTCCCTTGGAGTATTCGTGCCGGGCTaGCTCCTCCTCCCAGGTCAC | + |
Preference number: 4 (lower is better) Translates to: CNGSRHWGKKAHYTESLGVFVPG*LLLPGH Trigger: GTGACCTGGGAGGAGGAGGCAGCCCGGCACGAATAC...TCCAAGGGACTCTGTGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | CCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCTGGTCTTCTTCCTGGTAAGGAGAGCCTaGATCTGGTGTTCAGACCCT | + |
Preference number: 4 (lower is better) Translates to: PGNAGGSVLSSQTGLVFFLVRRA*IWCSDP Trigger: AGGGTCTGAACACCAGATGCAGGCTCTCCTTACCAG...GAAGAAGACCAGACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | TGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCTGGCTCCTTCTGCAGTTCTaGCTCCTTCTGGTACGCCTT | + |
Preference number: 4 (lower is better) Translates to: WCFLATLGEVYYQARQVWLLLQF*LLLVRL Trigger: AAGGCGTACCAGAAGGAGCCAGAACTGCAGAAGGAG...CCAGACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | CCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTTTGCCGTTCACATCCTaGAGGGCAGAGGTGGCTCTC | + |
Preference number: 4 (lower is better) Translates to: PVSQSSTSIDCQVPLSPSLPFTS*RAEVAL Trigger: GAGAGCCACCTCTGCCCTCCAGGATGTGAACGGCAA...ACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTTTGCCGTTCACATCCTaGAGGGCAGAGGTGGCTCTC | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPLPFTS*RAEVAL Trigger: GAGAGCCACCTCTGCCCTCCAGGATGTGAACGGCAA...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTGACCAGCCAGGGCTCTaGCCAGACTGCACAATGGTT | + |
Preference number: 4 (lower is better) Translates to: PVSQSSTSIDCQVPLSPSDQPGL*PDCTMV Trigger: AACCATTGTGCAGTCTGGCCAGAGCCCTGGCTGGTC...ACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTCTGGGAGTGGCTGAGTGGTaGAGGGTGGAAGCACCTTCT | + |
Preference number: 4 (lower is better) Translates to: VSQSSTSIDCQVPLSPSLGVAEW*RVEAPS Trigger: AGAAGGTGCTTCCACCCTCCACCACTCAGCCACTCC...CAGACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CCTCCGACTCCTGGGAGCTCTGTTCCATTCTTAGGCAATTCTCCTTGTGAGTCTCTGCTCAGGACTCTCTaGCTTGGAAGAGGCCTCATC | + |
Preference number: 4 (lower is better) Translates to: PPTPGSSVPFLGNSPCESLLRTL*LGRGLI Trigger: GATGAGGCCTCTTCCAAGTCAGAGAGTCCTGAGCAG...AGACTCACAAGGAGAATTGCCTAAGAATGGAACAGAGCTCCCAGGAGTCGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | CAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCTCACAAGGAAGAAACTaGGACCCGAAGGTCCAGCTT | + |
Preference number: 4 (lower is better) Translates to: QASSHLSHRAPPALTAKFSQGRN*DPKVQL Trigger: AAGCTGGACCTTCGGGTCTCAGTTTCTTCCTTGTGA...GAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTAATGTGCACAGGATCTaGCCCAGCCACTGCATGACG | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPNVHRI*PSHCMT Trigger: CGTCATGCAGTGGCTGGGTCAGATCCTGTGCACATT...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTCCTGGAAGGAGTGGCTaGGTGGTGGAGGGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLPGRSG*VVEGGS Trigger: GCTTCCACCCTCCACCACTCAGCCACTCCTTCCAGG...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CCGTGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCCCTTCTCACTGGGAATaGTGGGGTGGTATAACTGAA | + |
Preference number: 4 (lower is better) Translates to: PWCFLATLGEVYYQARQVPSHWE*WGGITE Trigger: TTCAGTTATACCACCCCATCATTCCCAGTGAGAAGG...GACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | AAGGAAAAGGACACTGTTGGCTTGGACATGAGGGGTGGCACAGGACTGCTTTACGTGGGCGCTGGCATCTaGAGGTGTGTTCTCCAGAAT | + |
Preference number: 4 (lower is better) Translates to: KEKDTVGLDMRGGTGLLYVGAGI*RCVLQN Trigger: ATTCTGGAGAACACACCTGCAGATGCCAGCGCCCAC...GTAAAGCAGTCCTGTGCCACCCCTCATGTCCAAGCCAACAGTGTCCTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | CCGTGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCAGACTGCACAATGGTTaGCACACCAGGCTTCTTAAC | + |
Preference number: 4 (lower is better) Translates to: PWCFLATLGEVYYQARQVRLHNG*HTRLLN Trigger: GTTAAGAAGCCTGGTGTGGCAACCATTGTGCAGTCT...GACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTGGAGGACCACAAATGTaGACAGGATCTGACCCAGCC | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPGGPQM*TGSDPA Trigger: GGCTGGGTCAGATCCTGTGCACATTTGTGGTCCTCC...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGAACCGCGCCAGCGACTGTTGTTaGCTTTGGTATCCTTGTTTT | + |
Preference number: 4 (lower is better) Translates to: QPHTPTDPPSNSPLPWNRASDCC*LWYPCF Trigger: AAAACAAGGATACCAAAGGCAACAACAGTCGCTGGC...GCGGTTCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | AGTGGCACTGCTGAGCCACCCACTGTGGCCTCCCACACTAGGCATTCTGTAAGGTCTGGCTCAGTCTGGTaGTCTTCTTGGAAAGAGTAT | + |
Preference number: 4 (lower is better) Translates to: SGTAEPPTVASHTRHSVRSGSVW*SSWKEY Trigger: ATACTCTTTCCAAGAAGACCACCAGACTGAGCCAGA...CCTTACAGAATGCCTAGTGTGGGAGGCCACAGTGGGTGGCTCAGCAGTGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | CAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCACTGCATGACGAGTTaGTTAAACTGTGGGAGCTCG | + |
Preference number: 4 (lower is better) Translates to: QASSHLSHRAPPALTAKFHCMTS*LNCGSS Trigger: CGAGCTCCCACAGTTTAACCAACTCGTCATGCAGTG...GAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | TTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGCGCCAGGCCAGTAGTCCTGGTGTTCAGACCCTaGAAGGAGTGGCTGAGTGGT | + |
Preference number: 4 (lower is better) Translates to: FLPHPTTWLFSQSARPVVLVFRP*KEWLSG Trigger: ACCACTCAGCCACTCCTTCCAGGGTCTGAACACCAG...GACTACTGGCCTGGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCTTCCCCTTCTTGTCTTaGGCCTCTAGGATGGTCACA | + |
Preference number: 4 (lower is better) Translates to: QASSHLSHRAPPALTAKFFPFLS*ASRMVT Trigger: TGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAA...GAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCTGGTCTTCTTCTTCCCCTTCTTGTCTTaGGCCTCTAGGATGGTCACA | + |
Preference number: 4 (lower is better) Translates to: PGNAGGSVLSSQTGLVFFFPFLS*ASRMVT Trigger: TGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAA...GAAGAAGACCAGACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CAGCAATGTGGAAGTGTAAGCAGAATAACCCTTTCCTCCCCAACTGCTTCTTGGAAAGAGTATGTGTGTTaGTGCGGGCCAGCCGCTCCC | + |
Preference number: 4 (lower is better) Translates to: QQCGSVSRITLSSPTASWKEYVC*CGPAAP Trigger: GGGAGCGGCTGGCCCGCATCAACACACATACTCTTT...CCAAGAAGCAGTTGGGGAGGAAAGGGTTATTCTGCTTACACTTCCACATTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTCTGGAAGTCCGGCTCTaGGACGTGGTGATGAGGCAG | + |
Preference number: 4 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLLEVRL*DVVMRQ Trigger: CTGCCTCATCACCACGTCTCAGAGCCGGACTTCCAG...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTTATACTGCCACCACCTaGCTCATGGTTGGGACAGTG | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPYTATT*LMVGTV Trigger: CACTGTCCCAACCATGAGTCAGGTGGTGGCAGTATA...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | AGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGGTATTCGTGCCGGGCTaGCTCCTCCTCCCAGGTCAC | + |
Preference number: 4 (lower is better) Translates to: SLMTYILTTSHDLVIFPEVFVPG*LLLPGH Trigger: GTGACCTGGGAGGAGGAGGCAGCCCGGCACGAATAC...CTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GTCTGGTCTTCTTCAGAGATGCCCTGCCTGCGACTAACACAAGCAACATTCATCTCGGCGAGGTCTCTCTaGAGGACCACAAATGTGCAC | + |
Preference number: 4 (lower is better) Translates to: VWSSSEMPCLRLTQATFISARSL*RTTNVH Trigger: GTGCACATTTGTGGTCCTCCAGAGAGACCTCGCCGA...GATGAATGTTGCTTGTGTTAGTCGCAGGCAGGGCATCTCTGAAGAAGACCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGAATGTTGCTTGACACCTaGTATAGCTTCTCAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: AISLTHPLIHPQIPLFPGMLLDT*YSFSGP Trigger: TGGCCCTGAGAAGCTATACCAGGTGTCAAGCAACAT...TCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCAGACAGGTCTGGTCTTCTTCATGTTGCTTGACACCTaGTATAGCTTCTCAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: PGNAGGSVLSSQTGLVFFMLLDT*YSFSGP Trigger: TGGCCCTGAGAAGCTATACCAGGTGTCAAGCAACAT...GAAGAAGACCAGACCTGTCTGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTAGAAGGGCCACGATTTaGCCCCGCAGCAGGGTCAGG | + |
Preference number: 4 (lower is better) Translates to: RILSLMTYILTTSHDLVIRRATI*PRSRVR Trigger: CCTGACCCTGCTGCGGGGCCAAATCGTGGCCCTTCT...AATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTTCATGTGTCCCTGTCTaGCCTCTGAGCTCCTTCTCA | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPSCVPV*PLSSFS Trigger: TGAGAAGGAGCTCAGAGGCCAGACAGGGACACATGA...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTTCATGTGTCCCTGTCTaGCCTCTGAGCTCCTTCTCA | + |
Preference number: 4 (lower is better) Translates to: PVSQSSTSIDCQVPLSPSSCVPV*PLSSFS Trigger: TGAGAAGGAGCTCAGAGGCCAGACAGGGACACATGA...ACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTGGGCTCTGGGGCTaGAAGCCAGGAGTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLGGLWG*KPGVFM Trigger: CATGAAGACTCCTGGCTTCCAGCCCCAGAGCCCACC...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | ACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGCGCCAGGCCAGGATGGTCACAGGCTaGCCTGCCTGTAGACTCAGT | + |
Preference number: 4 (lower is better) Translates to: TYILTTSHDLVIFPERQARMVTG*PACRLS Trigger: ACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCT...GGCCTGGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CCTCAGAACCTAGGCCCATGGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTCCTCCAGATTACCCATaGAATCGACCACATTGTTTC | + |
Preference number: 4 (lower is better) Translates to: PQNLGPWLPLEQDSSQFTPPDYP*NRPHCF Trigger: GAAACAATGTGGTCGATTTCATGGGTAATCTGGAGG...AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GTAGTGAGCCGTGGTGTTTCCTGGCAACGCTGGGGGAAGTGTACTATCAAGCCATCTGGCTCAGTCTGGTaGTCTTCTTGGAAAGAGTAT | + |
Preference number: 4 (lower is better) Translates to: VVSRGVSWQRWGKCTIKPSGSVW*SSWKEY Trigger: ATACTCTTTCCAAGAAGACCACCAGACTGAGCCAGA...TGGCTTGATAGTACACTTCCCCCAGCGTTGCCAGGAAACACCACGGCTCACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | TTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGCGCCAGGCCAGTAGTCGCATCTGGCTCAGTCTaGTGGTCTTCTTGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: FLPHPTTWLFSQSARPVVASGSV*WSSWKE Trigger: CTCTTTCCAAGAAGACCACCAGACTGAGCCAGATGC...GACTACTGGCCTGGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GTCTGGTCTTCTTCAGAGATGCCCTGCCTGCGACTAACACAAGCAACATTCATCCACAGAGACACCCACTaGAATCTCTCCTCCAGGTCA | + |
Preference number: 4 (lower is better) Translates to: VWSSSEMPCLRLTQATFIHRDTH*NLSSRS Trigger: TGACCTGGAGGAGAGATTCCAGTGGGTGTCTCTGTG...GATGAATGTTGCTTGTGTTAGTCGCAGGCAGGGCATCTCTGAAGAAGACCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTAGACCCTGGAAGGAGTaGCTGAGTGGTGGAGGGTGG | + |
Preference number: 4 (lower is better) Translates to: RILSLMTYILTTSHDLVIRPWKE*LSGGGW Trigger: CCACCCTCCACCACTCAGCCACTCCTTCCAGGGTCT...AATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTGTTCGTGGGTGCTTCTaGCCACAAAAGGGTATACTG | + |
Preference number: 4 (lower is better) Translates to: LDHCNQPHTPTDPPSNSPVRGCF*PQKGIL Trigger: CAGTATACCCTTTTGTGGCCAGAAGCACCCACGAAC...AGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | ACCACGAGTCTAGACCATTGCAATCAGCCTCACACACCCACTGATCCACCCTCATGTAGACTCAGTTCGTaGGTGCTTCTGGCCACAAAA | + |
Preference number: 4 (lower is better) Translates to: TTSLDHCNQPHTPTDPPSCRLSS*VLLATK Trigger: TTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACA...TGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGCAATGGTCTAGACTCGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CAGCAATGTGGAAGTGTAAGCAGAATAACCCTTTCCTCCCCAACTGCTTCTTGGAGGATGGTCACAGGCTaGCCTGCCTGTAGACTCAGT | + |
Preference number: 4 (lower is better) Translates to: QQCGSVSRITLSSPTASWRMVTG*PACRLS Trigger: ACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCT...CCAAGAAGCAGTTGGGGAGGAAAGGGTTATTCTGCTTACACTTCCACATTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 72 bp | AATGGCTGCGCCATCCCGACGCCACTAACAGTCTTTTaGTTAGTGTCACGCTTCCTGGTTGACAAGGATCCT | + |
Preference number: 4 (lower is better) Translates to: NGCAIPTPLTVF*LVSRFLVDKDP Trigger: AGGATCCTTGTCAACCAGGAAGCGTGACACTAACAAAAAGACTGTTAGTGGCGTCGGGATGGCGCAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGCAGCAGAGCCATGGTaGTCTCTGCCCTTCGTAGCA | + |
Preference number: 4 (lower is better) Translates to: QPHDIHSYHIPRLGYFPRAAEPW*SLPFVA Trigger: TGCTACGAAGGGCAGAGAGCACCATGGCTCTGCTGC...TCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | CCTGCGACTAACACAAGCAACATTCATCCTTTTAAGTCCATAGGAATGGGGGTTGCCCCTCTGTCCGTTTaGTTCCACCAGGCTCCATTC | + |
Preference number: 4 (lower is better) Translates to: PATNTSNIHPFKSIGMGVAPLSV*FHQAPF Trigger: GAATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGC...AACCCCCATTCCTATGGACTTAAAAGGATGAATGTTGCTTGTGTTAGTCGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | CAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGACGAAGGTCCAGCTTGTaGCCTGAGGGAGAAGGTTGC | + |
Preference number: 4 (lower is better) Translates to: QPHDIHSYHIPRLGYFPRRRSSL*PEGEGC Trigger: GCAACCTTCTCCCTCAGGCCACAAGCTGGACCTTCG...TCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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3UTR CAA 72 bp | AGCCTCATGACATACATTCTTACCACATCCCACGACTaGGTTATTTTCCCAGAGCGCCAGGCCAGTAGTCAC | + |
Preference number: 4 (lower is better) Translates to: SLMTYILTTSHD*VIFPERQASSH Trigger: GTGACTACTGGCCTGGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | GTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTCTGCCTCCAGATTACCCATaGAATCGACCACATTGTTTC | + |
Preference number: 4 (lower is better) Translates to: VSQSSTSIDCQVPLSPSLPPDYP*NRPHCF Trigger: GAAACAATGTGGTCGATTTCATGGGTAATCTGGAGG...CAGACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR TCA 90 bp | CAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAAATGTGCACAGGATCTaGCCCAGCCACTGCATGACG | + |
Preference number: 4 (lower is better) Translates to: QPHDIHSYHIPRLGYFPRNVHRI*PSHCMT Trigger: CGTCATGCAGTGGCTGGGTCAGATCCTGTGCACATT...TCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GAACAGGCTGTTCTATTACAAACTGCTTCTAAAGCTTCCTGCTTAGATAGCCAGGGAGTGGCTGAGTGGTaGAGGGTGGAAGCACCTTCT | + |
Preference number: 4 (lower is better) Translates to: EQAVLLQTASKASCLDSQGVAEW*RVEAPS Trigger: AGAAGGTGCTTCCACCCTCCACCACTCAGCCACTCC...CTGGCTATCTAAGCAGGAAGCTTTAGAAGCAGTTTGTAATAGAACAGCCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | CAGCAATGTGGAAGTGTAAGCAGAATAACCCTTTCCTCCCCAACTGCTTCTTGGGTTCGTGGGTGCTTCTaGCCACAAAAGGGTATACTG | + |
Preference number: 4 (lower is better) Translates to: QQCGSVSRITLSSPTASWVRGCF*PQKGIL Trigger: CAGTATACCCTTTTGTGGCCAGAAGCACCCACGAAC...CCAAGAAGCAGTTGGGGAGGAAAGGGTTATTCTGCTTACACTTCCACATTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | CCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCTGTTGTAGGTGGCTTCTaGTGTCAGAGGCACAGAGTC | + |
Preference number: 4 (lower is better) Translates to: PQPHDIHSYHIPRLGYFPVVGGF*CQRHRV Trigger: GACTCTGTGCCTCTGACATCAGAAGCCACCTACAAC...AGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | CCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCTTATACTGCCACCACCTaGCTCATGGTTGGGACAGTG | + |
Preference number: 4 (lower is better) Translates to: PQPHDIHSYHIPRLGYFPYTATT*LMVGTV Trigger: CACTGTCCCAACCATGAGTCAGGTGGTGGCAGTATA...AGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR GCA 90 bp | AGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGCTGGTAAGGAGAGCCTaGATCTGGTGTTCAGACCCT | + |
Preference number: 4 (lower is better) Translates to: SLMTYILTTSHDLVIFPELVRRA*IWCSDP Trigger: AGGGTCTGAACACCAGATGCAGGCTCTCCTTACCAG...CTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | TCTTCTTCAGAGATGCCCTGCCTGCGACTAACACAAGCAACATTCATCCTTTTAGACTCAGTTCGTGGGTaGTTCTGGCCACAAAAGGGT | + |
Preference number: 4 (lower is better) Translates to: SSSEMPCLRLTQATFILLDSVRG*FWPQKG Trigger: ACCCTTTTGTGGCCAGAAGCACCCACGAACTGAGTC...TAAAAGGATGAATGTTGCTTGTGTTAGTCGCAGGCAGGGCATCTCTGAAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CCA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGCATCTGGCTCAGTCTaGTGGTCTTCTTGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLASGSV*WSSWKE Trigger: CTCTTTCCAAGAAGACCACCAGACTGAGCCAGATGC...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR GCA 90 bp | TGCAATGGCTCTAGGCATTGGGGTAAAAAGGCACATTACACAGAGTCCCTTGGAGCCAGCGACTGTTGTTaGCTTTGGTATCCTTGTTTT | + |
Preference number: 4 (lower is better) Translates to: CNGSRHWGKKAHYTESLGASDCC*LWYPCF Trigger: AAAACAAGGATACCAAAGGCAACAACAGTCGCTGGC...TCCAAGGGACTCTGTGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 72 bp | GCCTGTCATCCTCGAACGGGGTCTTCTTTGAGGGGTTaGTTTCCAGATTTGAGAAATGACTTGCTCACTAAG | + |
Preference number: 4 (lower is better) Translates to: ACHPRTGSSLRG*FPDLRNDLLTK Trigger: CTTAGTGAGCAAGTCATTTCTCAAATCTGGAAACAAACCCCTCAAAGAAGACCCCGTTCGAGGATGACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR TCA 90 bp | GAACAGGCTGTTCTATTACAAACTGCTTCTAAAGCTTCCTGCTTAGATAGCCAGTCACAAGGAAGAAACTaGGACCCGAAGGTCCAGCTT | + |
Preference number: 4 (lower is better) Translates to: EQAVLLQTASKASCLDSQSQGRN*DPKVQL Trigger: AAGCTGGACCTTCGGGTCTCAGTTTCTTCCTTGTGA...CTGGCTATCTAAGCAGGAAGCTTTAGAAGCAGTTTGTAATAGAACAGCCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CCA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTGTAGACTCAGTTCGTaGGTGCTTCTGGCCACAAAA | + |
Preference number: 4 (lower is better) Translates to: RILSLMTYILTTSHDLVICRLSS*VLLATK Trigger: TTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACA...AATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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3UTR CAA 72 bp | AGCCTCATGACATACATTCTTACCACATCCCACGACTaGGTTATTTTCCTAGGTGGAAAAGTGCAGTTGTGT | + |
Preference number: 4 (lower is better) Translates to: SLMTYILTTSHD*VIFLGGKVQLC Trigger: ACACAACTGCACTTTTCCACCTAGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 72 bp | GCTGTCTCTCAAGAGGGTCAATTCCAAATTTGTCGGTaGTATAGAGATCATAGTGGATCACCTTTTTCACTG | + |
Preference number: 4 (lower is better) Translates to: AVSQEGQFQICR*YRDHSGSPFSL Trigger: CAGTGAAAAAGGTGATCCACTATGATCTCTATACAACCGACAAATTTGGAATTGACCCTCTTGAGAGACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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3UTR CAA 72 bp | TCCCGTGAGATTATATTGCCTAGTGATGTCATAACCTaGTTATTTTGCACACTCCATGATGTTCACACAAAA | + |
Preference number: 4 (lower is better) Translates to: SREIILPSDVIT*LFCTLHDVHTK Trigger: TTTTGTGTGAACATCATGGAGTGTGCAAAATAACAAGGTTATGACATCACTAGGCAATATAATCTCACGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS CCA 90 bp | TGGTTAAACTGTGGGAGCTCGGCCACTAGTAAGGAGTTGAGCGCCTaGTATTCGTGCCGGGCTGCCTCCTCCTCCCAGGTCACGCTGCCC | + |
Preference number: 5 (lower is better) Translates to: WLNCGSSATSKELSA*YSCRAASSSQVTLP Trigger: GGGCAGCGTGACCTGGGAGGAGGAGGCAGCCCGGCACGAATACCAGGCGCTCAACTCCTTACTAGTGGCCGAGCTCCCACAGTTTAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AGTGGCACTGCTGAGCCACCCACTGTGGCCTCCCACACTAGGCATTCTGTAAGGTCCAGCCCCAGGGAGTaGGGCTTGGGGTCCTGGCTA | + |
Preference number: 5 (lower is better) Translates to: SGTAEPPTVASHTRHSVRSSPRE*GLGSWL Trigger: TAGCCAGGACCCCAAGCCCAACTCCCTGGGGCTGGA...CCTTACAGAATGCCTAGTGTGGGAGGCCACAGTGGGTGGCTCAGCAGTGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | GGGGGAATGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCGAAAGAGTATGTGTGTaGATGCGGGCCAGCCGCTCC | + |
Preference number: 5 (lower is better) Translates to: GGMAPCGWDHLWAGSLGFERVCV*MRASRS Trigger: GGAGCGGCTGGCCCGCATCAACACACATACTCTTTC...GAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCATTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS GCA 90 bp | CCAGCTTGTGGCATGGCAGCTTCGATGATGCCCTGGATCTCCTTCTaGAGTTCTGGCTCCTTCTGGTACGCCTTGACCAGCAGCAGGGCC | + |
Preference number: 5 (lower is better) Translates to: PACGMAASMMPWISF*SSGSFWYALTSSRA Trigger: GGCCCTGCTGCTGGTCAAGGCGTACCAGAAGGAGCCAGAACTGCAGAAGGAGATCCAGGGCATCATCGAAGCTGCCATGCCACAAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS GCA 90 bp | GAGGGCAGAGGTGGCTCTCTGAAGGGCAGGGTGGGCGCTGGCATCTaGAGGTGTGTTCTCCAGAATTTTCTGCAGCAGGAGGGGGTACTT | + |
Preference number: 5 (lower is better) Translates to: EGRGGSLKGRVGAGI*RCVLQNFLQQEGVL Trigger: AAGTACCCCCTCCTGCTGCAGAAAATTCTGGAGAACACACCTGCAGATGCCAGCGCCCACCCTGCCCTTCAGAGAGCCACCTCTGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 90 bp | GGAAGTCCGGCTCTGAGACGTGGTGATGAGGCAGCAGAGCCATGGTaGTCTCTGCCCTTCGTAGCACTTGATCGGCGAGGTCTCTCTGGA | + |
Preference number: 5 (lower is better) Translates to: GSPALRRGDEAAEPW*SLPFVALDRRGLSG Trigger: TCCAGAGAGACCTCGCCGATCAAGTGCTACGAAGGGCAGAGAGCACCATGGCTCTGCTGCCTCATCACCACGTCTCAGAGCCGGACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | CCAGGCTCCATTCTGGGTTCCCCTTCTTGTCTTGGGCCTCTAGGATaGTCACAGGCTGGCCTGCCTGTAGACTCAGTTCGTGGGTGCTTC | + |
Preference number: 5 (lower is better) Translates to: PGSILGSPSCLGPLG*SQAGLPVDSVRGCF Trigger: GAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCAGAGCGCCAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTGAAAGAGTATGTGTGTaGATGCGGGCCAGCCGCTCC | + |
Preference number: 5 (lower is better) Translates to: PERQASSHLSHRAPPALTERVCV*MRASRS Trigger: GGAGCGGCTGGCCCGCATCAACACACATACTCTTTC...AGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTGGCGCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 90 bp | GCATCTGGCTCAGTCTGGTGGTCTTCTTGGAAAGAGTATGTGTGTTaGTGCGGGCCAGCCGCTCCCGAAGGCTCAGCTGCTCCACTTTGG | + |
Preference number: 5 (lower is better) Translates to: ASGSVWWSSWKEYVC*CGPAAPEGSAAPLW Trigger: CCAAAGTGGAGCAGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACACATACTCTTTCCAAGAAGACCACCAGACTGAGCCAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 90 bp | ACCAGGCTTCTTAACCGCTGCTTAAACTGCAGAAAGGCATGGAGCTaGAGGTCCCTCGCTAGGCTGCAGTACTGCTCCGCAGGTCCCCCA | + |
Preference number: 5 (lower is better) Translates to: TRLLNRCLNCRKAWS*RSLARLQYCSAGPP Trigger: TGGGGGACCTGCGGAGCAGTACTGCAGCCTAGCGAGGGACCTTCAGCTCCATGCCTTTCTGCAGTTTAAGCAGCGGTTAAGAAGCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 90 bp | CGATTTGGCCCCGCAGCAGGGTCAGGTCCAGAGTCCCAGTCCCGTTaGTGTTGCTTGACACCTGGTATAGCTTCTCAGGGCCATATCTGG | + |
Preference number: 5 (lower is better) Translates to: RFGPAAGSGPESQSR*CCLTPGIASQGHIW Trigger: CCAGATATGGCCCTGAGAAGCTATACCAGGTGTCAAGCAACATCAACGGGACTGGGACTCTGGACCTGACCCTGCTGCGGGGCCAAATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | TGGCATGGCAGCTTCGATGATGCCCTGGATCTCCTTCTGCAGTTCTaGCTCCTTCTGGTACGCCTTGACCAGCAGCAGGGCCTGGTCATA | + |
Preference number: 5 (lower is better) Translates to: WHGSFDDALDLLLQF*LLLVRLDQQQGLVI Trigger: TATGACCAGGCCCTGCTGCTGGTCAAGGCGTACCAGAAGGAGCCAGAACTGCAGAAGGAGATCCAGGGCATCATCGAAGCTGCCATGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS CCA 90 bp | CCGTTTGCTTCCACCAGGCTCCATTCTGGGTTCCCCTTCTTGTCTTaGGCCTCTAGGATGGTCACAGGCTGGCCTGCCTGTAGACTCAGT | + |
Preference number: 5 (lower is better) Translates to: PFASTRLHSGFPFLS*ASRMVTGWPACRLS Trigger: ACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CTGCAGCCTCCATGGCCTCAGAGGCAAACCCAGGCCACCTGTGTTCTCTGGTTCTCGAAGTCCAGGAGTTaGTCCAGGCGCTTCTTGATC | + |
Preference number: 5 (lower is better) Translates to: LQPPWPQRQTQATCVLWFSKSRS*SRRFLI Trigger: GATCAAGAAGCGCCTGGACAAACTCCTGGACTTCGA...GAACCAGAGAACACAGGTGGCCTGGGTTTGCCTCTGAGGCCATGGAGGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | CCCTGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACTCTGGGTTCCCCTTCTaGTCTTGGGCCTCTAGGATG | + |
Preference number: 5 (lower is better) Translates to: PWNRLRVCTHSPDLCRDHSGFPF*SWASRM Trigger: CATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGA...GTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | GGGGTCTTGCTCTTGCATCACACTGTTGGGGCTTTAACAAGCCCAGAGGAGGCGAGCCCCTCTGTCCGTTaGCTTCCACCAGGCTCCATT | + |
Preference number: 5 (lower is better) Translates to: GVLLLHHTVGALTSPEEASPSVR*LPPGSI Trigger: AATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGCT...CGCCTCCTCTGGGCTTGTTAAAGCCCCAACAGTGTGATGCAAGAGCAAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | ACCACATCCCACGACTTGGTTATTTTCCCAGAGCGCCAGGCCAGTAGTCACCTGCCCAGGGAGTTGGGCTaGGGGTCCTGGCTAGAAAGT | + |
Preference number: 5 (lower is better) Translates to: TTSHDLVIFPERQASSHLPRELG*GSWLES Trigger: ACTTTCTAGCCAGGACCCCAAGCCCAACTCCCTGGG...CAGGTGACTACTGGCCTGGCGCTCTGGGAAAATAACCAAGTCGTGGGATGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS GCA 90 bp | TTACCAATCAGGTGCGCTTGCTCCTCTTCCCTGCAGGCTGTCTCCTaGAGCCCTCGAAGGAACCTGCTGCTCACTTGGATGATGTCATCG | + |
Preference number: 5 (lower is better) Translates to: LPIRCACSSSLQAVS*SPRRNLLLTWMMSS Trigger: CGATGACATCATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGCCTGCAGGGAAGAGGAGCAAGCGCACCTGATTGGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS GCA 90 bp | CTAGGATGGTCACAGGCTGGCCTGCCTGTAGACTCAGTTCGTGGGTaGTTCTGGCCACAAAAGGGTATACTGCCACCACCTGACTCATGG | + |
Preference number: 5 (lower is better) Translates to: LGWSQAGLPVDSVRG*FWPQKGILPPPDSW Trigger: CCATGAGTCAGGTGGTGGCAGTATACCCTTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | CATCTGGTGTTCAGACCCTGGAAGGAGTGGCTGAGTGGTGGAGGGTaGAAGCACCTTCTCAAAGCTCTCCTGAAAGAGGCGGAGCTGACT | + |
Preference number: 5 (lower is better) Translates to: HLVFRPWKEWLSGGG*KHLLKALLKEAELT Trigger: AGTCAGCTCCGCCTCTTTCAGGAGAGCTTTGAGAAGGTGCTTCCACCCTCCACCACTCAGCCACTCCTTCCAGGGTCTGAACACCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | TGGTCACAGGCTGGCCTGCCTGTAGACTCAGTTCGTGGGTGCTTCTaGCCACAAAAGGGTATACTGCCACCACCTGACTCATGGTTGGGA | + |
Preference number: 5 (lower is better) Translates to: WSQAGLPVDSVRGCF*PQKGILPPPDSWLG Trigger: TCCCAACCATGAGTCAGGTGGTGGCAGTATACCCTTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGCCTGTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | TCTGGGTTCCCCTTCTTGTCTTGGGCCTCTAGGATGGTCACAGGCTaGCCTGCCTGTAGACTCAGTTCGTGGGTGCTTCTGGCCACAAAA | + |
Preference number: 5 (lower is better) Translates to: SGFPFLSWASRMVTG*PACRLSSWVLLATK Trigger: TTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACACCAATCAGGTGCGCTaGCTCCTCTTCCCTGCAGGC | + |
Preference number: 5 (lower is better) Translates to: KPVKNIPPWPLHQLLLPDTNQVR*LLFPAG Trigger: GCCTGCAGGGAAGAGGAGCAAGCGCACCTGATTGGT...GTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS TCA 90 bp | AGGCTGTCTCCTGCAGCCCTCGAAGGAACCTGCTGCTCACTTGGATaGTGTCATCGATGTTGGAGAACAGGATGTCCAGATCGCCTGGTG | + |
Preference number: 5 (lower is better) Translates to: RLSPAALEGTCCSLG*CHRCWRTGCPDRLV Trigger: CACCAGGCGATCTGGACATCCTGTTCTCCAACATCGATGACATCATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS GCA 90 bp | GCAGGGTGGGCGCTGGCATCTGCAGGTGTGTTCTCCAGAATTTTCTaGAGCAGGAGGGGGTACTTGGTAATCCTCTGTAGAGGGATCACA | + |
Preference number: 5 (lower is better) Translates to: AGWALASAGVFSRIF*SRRGYLVILCRGIT Trigger: TGTGATCCCTCTACAGAGGATTACCAAGTACCCCCTCCTGCTGCAGAAAATTCTGGAGAACACACCTGCAGATGCCAGCGCCCACCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | CTGCAGGCTGTCTCCTGCAGCCCTCGAAGGAACCTGCTGCTCACTTaGATGATGTCATCGATGTTGGAGAACAGGATGTCCAGATCGCCT | + |
Preference number: 5 (lower is better) Translates to: LQAVSCSPRRNLLLT*MMSSMLENRMSRSP Trigger: AGGCGATCTGGACATCCTGTTCTCCAACATCGATGACATCATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS-3UTR CAA 90 bp | CTTCCCTGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACTCAGGACTCTCTGACTaGGAAGAGGCCTCATCTGCT | + |
Preference number: 5 (lower is better) Translates to: LPWNRLRVCTHSPDLCRDSGLSD*EEASSA Trigger: AGCAGATGAGGCCTCTTCCAAGTCAGAGAGTCCTGA...GTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | GGGGTCTTGCTCTTGCATCACACTGTTGGGGCTTTAACAAGCCCAGAGGAGGCGCCACTGCATGACGAGTaGGTTAAACTGTGGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: GVLLLHHTVGALTSPEEAPLHDE*VKLWEL Trigger: GAGCTCCCACAGTTTAACCAACTCGTCATGCAGTGG...CGCCTCCTCTGGGCTTGTTAAAGCCCCAACAGTGTGATGCAAGAGCAAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | CTTCCCTGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACACCAGCCAGCGACTGTaGTTGCCTTTGGTATCCTTG | + |
Preference number: 5 (lower is better) Translates to: LPWNRLRVCTHSPDLCRDTSQRL*LPLVSL Trigger: CAAGGATACCAAAGGCAACAACAGTCGCTGGCTGGT...GTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCTCCGACTCCTGGGAGCTCTGTTCCATTCTTAGGCAATTCTCCTTGTGAGTCTCCCAGGGAGTTGGGCTaGGGGTCCTGGCTAGAAAGT | + |
Preference number: 5 (lower is better) Translates to: PPTPGSSVPFLGNSPCESPRELG*GSWLES Trigger: ACTTTCTAGCCAGGACCCCAAGCCCAACTCCCTGGG...AGACTCACAAGGAGAATTGCCTAAGAATGGAACAGAGCTCCCAGGAGTCGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS TCA 90 bp | TGCCCTGGATCTCCTTCTGCAGTTCTGGCTCCTTCTGGTACGCCTTaGCCAGCAGCAGGGCCTGGTCATAGTTGGCACAGTAGACTTTAT | + |
Preference number: 5 (lower is better) Translates to: CPGSPSAVLAPSGTP*PAAGPGHSWHSRLY Trigger: ATAAAGTCTACTGTGCCAACTATGACCAGGCCCTGCTGCTGGTCAAGGCGTACCAGAAGGAGCCAGAACTGCAGAAGGAGATCCAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS GCA 90 bp | AGAGTATGTGTGTTGATGCGGGCCAGCCGCTCCCGAAGGCTCAGCTaGTCCACTTTGGTATACTTTAAGGCCACTTCCTTGCGCATCTTG | + |
Preference number: 5 (lower is better) Translates to: RVCVLMRASRSRRLS*STLVYFKATSLRIL Trigger: CAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGTGGAGCAGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACACATACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 90 bp | AGGGTCAGGTCCAGAGTCCCAGTCCCGTTGATGTTGCTTGACACCTaGTATAGCTTCTCAGGGCCATATCTGGTAAGGAGAGCCTGCATC | + |
Preference number: 5 (lower is better) Translates to: RVRSRVPVPLMLLDT*YSFSGPYLVRRACI Trigger: GATGCAGGCTCTCCTTACCAGATATGGCCCTGAGAAGCTATACCAGGTGTCAAGCAACATCAACGGGACTGGGACTCTGGACCTGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | TGCAATGGCTCTAGGCATTGGGGTAAAAAGGCACATTACACAGAGTCCCTTGGATCCTTCTGGTACGCCTaGACCAGCAGCAGGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: CNGSRHWGKKAHYTESLGSFWYA*TSSRAW Trigger: CCAGGCCCTGCTGCTGGTCAAGGCGTACCAGAAGGA...TCCAAGGGACTCTGTGTAATGTGCCTTTTTACCCCAATGCCTAGAGCCATTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | GCAATCAGCCTCACACACCCACTGATCCACCCTCAAATTCCCCTCTTCCCTGGATCGAAGTCCAGGAGTTaGTCCAGGCGCTTCTTGATC | + |
Preference number: 5 (lower is better) Translates to: AISLTHPLIHPQIPLFPGSKSRS*SRRFLI Trigger: GATCAAGAAGCGCCTGGACAAACTCCTGGACTTCGA...TCCAGGGAAGAGGGGAATTTGAGGGTGGATCAGTGGGTGTGTGAGGCTGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCTTTGTCTCCTAGTAGCCCCTCTGTCCGTTaGCTTCCACCAGGCTCCATT | + |
Preference number: 5 (lower is better) Translates to: PVSQSSTSIDCQVPLSPSSPSVR*LPPGSI Trigger: AATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGCT...ACTAGGAGACAAAGGAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 90 bp | ACAGGATGTCCAGATCGCCTGGTGGCAGCTGTTGTAGGTGGCTTCTaGTGTCAGAGGCACAGAGTCGGAGCATGTGTAAGTAGGAGACTT | + |
Preference number: 5 (lower is better) Translates to: TGCPDRLVAAVVGGF*CQRHRVGACVSRRL Trigger: AAGTCTCCTACTTACACATGCTCCGACTCTGTGCCTCTGACATCAGAAGCCACCTACAACAGCTGCCACCAGGCGATCTGGACATCCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS GCA 90 bp | ATTCCAAGAATAAGTTACCAATCAGGTGCGCTTGCTCCTCTTCCCTaGAGGCTGTCTCCTGCAGCCCTCGAAGGAACCTGCTGCTCACTT | + |
Preference number: 5 (lower is better) Translates to: IPRISYQSGALAPLP*RLSPAALEGTCCSL Trigger: AAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGCCTGCAGGGAAGAGGAGCAAGCGCACCTGATTGGTAACTTATTCTTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS-3UTR CAA 90 bp | GGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACACCCAGGTCATCAAATTCCTaGTCTTCTGTCCGGGATACA | + |
Preference number: 5 (lower is better) Translates to: GTASEFVHTVQTCAETTPRSSNS*SSVRDT Trigger: TGTATCCCGGACAGAAGACAAGGAATTTGATGACCT...GGGTGTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTTTCCCAGAGTCCAGCCCCAGGGAGTaGGGCTTGGGGTCCTGGCTA | + |
Preference number: 5 (lower is better) Translates to: SLMTYILTTSHDLVIFPESSPRE*GLGSWL Trigger: TAGCCAGGACCCCAAGCCCAACTCCCTGGGGCTGGA...CTCTGGGAAAATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCCTGGAACCGCCTCCGAGTTTGTACACACAGTCCAGACCTGTGCAGAGACCACATGAAATCGACCACATaGTTTCTGAGCTCCTTCACA | + |
Preference number: 5 (lower is better) Translates to: PWNRLRVCTHSPDLCRDHMKSTT*FLSSFT Trigger: TGTGAAGGAGCTCAGAAACAATGTGGTCGATTTCAT...GTGGTCTCTGCACAGGTCTGGACTGTGTGTACAAACTCGGAGGCGGTTCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGCATTGACTGCCAAGTTCCGCATCTTGTATTCGTaGATATTGCCGTTCACATCC | + |
Preference number: 5 (lower is better) Translates to: QASSHLSHRAPPALTAKFRILYS*ILPFTS Trigger: GGATGTGAACGGCAATATCAACGAATACAAGATGCG...GAACTTGGCAGTCAATGCTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | TTATTTTCCCAGAGCGCCAGGCCAGTAGTCACCTGTCTCACAGAGCTCCACCAGACTTCCTTGCGCATCTaGTATTCGTTGATATTGCCG | + |
Preference number: 5 (lower is better) Translates to: LFSQSARPVVTCLTELHQTSLRI*YSLILP Trigger: CGGCAATATCAACGAATACAAGATGCGCAAGGAAGT...CTGGTGGAGCTCTGTGAGACAGGTGACTACTGGCCTGGCGCTCTGGGAAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACTTGCCTTTGGTATCCTaGTTTTGTAGAAGGGCCACG | + |
Preference number: 5 (lower is better) Translates to: KPVKNIPPWPLHQLLLPDLPLVS*FCRRAT Trigger: CGTGGCCCTTCTACAAAACAAGGATACCAAAGGCAA...GTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | CAGCAATGTGGAAGTGTAAGCAGAATAACCCTTTCCTCCCCAACTGCTTCTTGGTCTGGGTTCCCCTTCTaGTCTTGGGCCTCTAGGATG | + |
Preference number: 5 (lower is better) Translates to: QQCGSVSRITLSSPTASWSGFPF*SWASRM Trigger: CATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGA...CCAAGAAGCAGTTGGGGAGGAAAGGGTTATTCTGCTTACACTTCCACATTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | TCTTCTTCAGAGATGCCCTGCCTGCGACTAACACAAGCAACATTCATCCTTTTAACCCGAAGGTCCAGCTaGTGGCCTGAGGGAGAAGGT | + |
Preference number: 5 (lower is better) Translates to: SSSEMPCLRLTQATFILLTRRSS*WPEGEG Trigger: ACCTTCTCCCTCAGGCCACAAGCTGGACCTTCGGGT...TAAAAGGATGAATGTTGCTTGTGTTAGTCGCAGGCAGGGCATCTCTGAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCTCAGAACCTAGGCCCATGGCTTCCCCTTGAGCAGGACTCTTCACAGTTCACTATGAAATCGACCACATaGTTTCTGAGCTCCTTCACA | + |
Preference number: 5 (lower is better) Translates to: PQNLGPWLPLEQDSSQFTMKSTT*FLSSFT Trigger: TGTGAAGGAGCTCAGAAACAATGTGGTCGATTTCAT...AGTGAACTGTGAAGAGTCCTGCTCAAGGGGAAGCCATGGGCCTAGGTTCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAAACTTCCTTGCGCATCTaGTATTCGTTGATATTGCCG | + |
Preference number: 5 (lower is better) Translates to: SSCFLTCLSSSPDFLGDETSLRI*YSLILP Trigger: CGGCAATATCAACGAATACAAGATGCGCAAGGAAGT...TTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | CCTCCGACTCCTGGGAGCTCTGTTCCATTCTTAGGCAATTCTCCTTGTGAGTCTTTTAAGGCCACTTCCTaGCGCATCTTGTATTCGTTG | + |
Preference number: 5 (lower is better) Translates to: PPTPGSSVPFLGNSPCESFKATS*RILYSL Trigger: CAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAA...AGACTCACAAGGAGAATTGCCTAAGAATGGAACAGAGCTCCCAGGAGTCGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTCCACTGCATGACGAGTaGGTTAAACTGTGGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLPLHDE*VKLWEL Trigger: GAGCTCCCACAGTTTAACCAACTCGTCATGCAGTGG...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | GTTGACAAGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTACCAGCCAGCGACTGTaGTTGCCTTTGGTATCCTTG | + |
Preference number: 5 (lower is better) Translates to: VDKDPQPHDIHSYHIPRLTSQRL*LPLVSL Trigger: CAAGGATACCAAAGGCAACAACAGTCGCTGGCTGGT...AAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCTTGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTCCACCTGACTCATGGTaGGGACAGTGGGAACAGAGA | + |
Preference number: 5 (lower is better) Translates to: RILSLMTYILTTSHDLVIPPDSW*GQWEQR Trigger: TCTCTGTTCCCACTGTCCCAACCATGAGTCAGGTGG...AATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 90 bp | CTTTGGTATACTTTAAGGCCACTTCCTTGCGCATCTTGTATTCGTTaGTATTGCCGTTCACATCCTGGAGGGCAGAGGTGGCTCTCTGAA | + |
Preference number: 5 (lower is better) Translates to: LWYTLRPLPCASCIR*YCRSHPGGQRWLSE Trigger: TTCAGAGAGCCACCTCTGCCCTCCAGGATGTGAACGGCAATATCAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AGCAGCAAGAAAGAAAAGATGAGTAGTGAGCCGTGGTGTTTCCTGGCAACGCTGAGTCTGGTGGTCTTCTaGGAAAGAGTATGTGTGTTG | + |
Preference number: 5 (lower is better) Translates to: SSKKEKMSSEPWCFLATLSLVVF*ERVCVL Trigger: CAACACACATACTCTTTCCAAGAAGACCACCAGACT...CAGCGTTGCCAGGAAACACCACGGCTCACTACTCATCTTTTCTTTCTTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CAGCAATGTGGAAGTGTAAGCAGAATAACCCTTTCCTCCCCAACTGCTTCTTGGAGGTCATCAAATTCCTaGTCTTCTGTCCGGGATACA | + |
Preference number: 5 (lower is better) Translates to: QQCGSVSRITLSSPTASWRSSNS*SSVRDT Trigger: TGTATCCCGGACAGAAGACAAGGAATTTGATGACCT...CCAAGAAGCAGTTGGGGAGGAAAGGGTTATTCTGCTTACACTTCCACATTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS-3UTR CAA 90 bp | GCCCTGCCTGCGACTAACACAAGCAACATTCATCCTTTTAAGTCCATAGGAATGTTTAAGGCCACTTCCTaGCGCATCTTGTATTCGTTG | + |
Preference number: 5 (lower is better) Translates to: ALPATNTSNIHPFKSIGMFKATS*RILYSL Trigger: CAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAA...CATTCCTATGGACTTAAAAGGATGAATGTTGCTTGTGTTAGTCGCAGGCAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCTGCGACTAACACAAGCAACATTCATCCTTTTAAGTCCATAGGAATGGGGGTTTTGCCTTTGGTATCCTaGTTTTGTAGAAGGGCCACG | + |
Preference number: 5 (lower is better) Translates to: PATNTSNIHPFKSIGMGVLPLVS*FCRRAT Trigger: CGTGGCCCTTCTACAAAACAAGGATACCAAAGGCAA...AACCCCCATTCCTATGGACTTAAAAGGATGAATGTTGCTTGTGTTAGTCGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | CCTGCGACTAACACAAGCAACATTCATCCTTTTAAGTCCATAGGAATGGGGGTTCGCATCTTGTATTCGTaGATATTGCCGTTCACATCC | + |
Preference number: 5 (lower is better) Translates to: PATNTSNIHPFKSIGMGVRILYS*ILPFTS Trigger: GGATGTGAACGGCAATATCAACGAATACAAGATGCG...AACCCCCATTCCTATGGACTTAAAAGGATGAATGTTGCTTGTGTTAGTCGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236608.2 |
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CDS-3UTR CAA 90 bp | AGGATCCTCAGCCTCATGACATACATTCTTACCACATCCCACGACTTGGTTATTAGTCTGGTGGTCTTCTaGGAAAGAGTATGTGTGTTG | + |
Preference number: 5 (lower is better) Translates to: RILSLMTYILTTSHDLVISLVVF*ERVCVL Trigger: CAACACACATACTCTTTCCAAGAAGACCACCAGACT...AATAACCAAGTCGTGGGATGTGGTAAGAATGTATGTCATGAGGCTGAGGATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | TCGGCCACTAGTAAGGAGTTGAGCGCCTGGTATTCGTaGCGGGCTGCCTCCTCCTCCCAGGTCACGCTGCCC | + |
Preference number: 6 (lower is better) Translates to: SATSKELSAWYS*RAASSSQVTLP Trigger: GGGCAGCGTGACCTGGGAGGAGGAGGCAGCCCGGCACGAATACCAGGCGCTCAACTCCTTACTAGTGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | TGTGGGAGCTCGGCCACTAGTAAGGAGTTGAGCGCCTaGTATTCGTGCCGGGCTGCCTCCTCCTCCCAGGTC | + |
Preference number: 6 (lower is better) Translates to: CGSSATSKELSA*YSCRAASSSQV Trigger: GACCTGGGAGGAGGAGGCAGCCCGGCACGAATACCAGGCGCTCAACTCCTTACTAGTGGCCGAGCTCCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | AGGTGCGCTTGCTCCTCTTCCCTGCAGGCTGTCTCCTaGAGCCCTCGAAGGAACCTGCTGCTCACTTGGATG | + |
Preference number: 6 (lower is better) Translates to: RCACSSSLQAVS*SPRRNLLLTWM Trigger: CATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGCCTGCAGGGAAGAGGAGCAAGCGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS CCA 72 bp | GGTTGGGACAGTGGGAACAGAGAGCTGGGTGGGCTCTaGGGCTGGAAGCCAGGAGTCTTCATGTGTCCCTGT | + |
Preference number: 6 (lower is better) Translates to: GWDSGNRELGGL*GWKPGVFMCPC Trigger: ACAGGGACACATGAAGACTCCTGGCTTCCAGCCCCAGAGCCCACCCAGCTCTCTGTTCCCACTGTCCCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 72 bp | CCCGCAGCAGGGTCAGGTCCAGAGTCCCAGTCCCGTTaGTGTTGCTTGACACCTGGTATAGCTTCTCAGGGC | + |
Preference number: 6 (lower is better) Translates to: PAAGSGPESQSR*CCLTPGIASQG Trigger: GCCCTGAGAAGCTATACCAGGTGTCAAGCAACATCAACGGGACTGGGACTCTGGACCTGACCCTGCTGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | GGTGGCTCTCTGAAGGGCAGGGTGGGCGCTGGCATCTaGAGGTGTGTTCTCCAGAATTTTCTGCAGCAGGAG | + |
Preference number: 6 (lower is better) Translates to: GGSLKGRVGAGI*RCVLQNFLQQE Trigger: CTCCTGCTGCAGAAAATTCTGGAGAACACACCTGCAGATGCCAGCGCCCACCCTGCCCTTCAGAGAGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | GCTCTGAGACGTGGTGATGAGGCAGCAGAGCCATGGTaGTCTCTGCCCTTCGTAGCACTTGATCGGCGAGGT | + |
Preference number: 6 (lower is better) Translates to: ALRRGDEAAEPW*SLPFVALDRRG Trigger: ACCTCGCCGATCAAGTGCTACGAAGGGCAGAGAGCACCATGGCTCTGCTGCCTCATCACCACGTCTCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | GGGCAGAGGTGGCTCTCTGAAGGGCAGGGTGGGCGCTaGCATCTGCAGGTGTGTTCTCCAGAATTTTCTGCA | + |
Preference number: 6 (lower is better) Translates to: GQRWLSEGQGGR*HLQVCSPEFSA Trigger: TGCAGAAAATTCTGGAGAACACACCTGCAGATGCCAGCGCCCACCCTGCCCTTCAGAGAGCCACCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | TCCACCAGGCTCCATTCTGGGTTCCCCTTCTTGTCTTaGGCCTCTAGGATGGTCACAGGCTGGCCTGCCTGT | + |
Preference number: 6 (lower is better) Translates to: STRLHSGFPFLS*ASRMVTGWPAC Trigger: ACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | TGGTTAAACTGTGGGAGCTCGGCCACTAGTAAGGAGTaGAGCGCCTGGTATTCGTGCCGGGCTGCCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: WLNCGSSATSKE*SAWYSCRAASS Trigger: GGAGGAGGCAGCCCGGCACGAATACCAGGCGCTCAACTCCTTACTAGTGGCCGAGCTCCCACAGTTTAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | CTCTGTCCGTTTGCTTCCACCAGGCTCCATTCTGGGTTCCCCTTCTaGTCTTGGGCCTCTAGGATGGTCACAGGCTGGCCTGCCTGTAGA | + |
Preference number: 6 (lower is better) Translates to: LCPFASTRLHSGFPF*SWASRMVTGWPACR Trigger: TCTACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAACGGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | GGCATGGCAGCTTCGATGATGCCCTGGATCTCCTTCTaGAGTTCTGGCTCCTTCTGGTACGCCTTGACCAGC | + |
Preference number: 6 (lower is better) Translates to: GMAASMMPWISF*SSGSFWYALTS Trigger: GCTGGTCAAGGCGTACCAGAAGGAGCCAGAACTGCAGAAGGAGATCCAGGGCATCATCGAAGCTGCCATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS GCA 72 bp | GGACCAGCCAGGGCTCTGGCCAGACTGCACAATGGTTaGCACACCAGGCTTCTTAACCGCTGCTTAAACTGC | + |
Preference number: 6 (lower is better) Translates to: GPARALARLHNG*HTRLLNRCLNC Trigger: GCAGTTTAAGCAGCGGTTAAGAAGCCTGGTGTGGCAACCATTGTGCAGTCTGGCCAGAGCCCTGGCTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | CCCTTCTTGTCTTGGGCCTCTAGGATGGTCACAGGCTaGCCTGCCTGTAGACTCAGTTCGTGGGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: PFLSWASRMVTG*PACRLSSWVLL Trigger: CAGAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | CCCAGGGAGTTGGGCTTGGGGTCCTGGCTAGAAAGTTaGAAGGCACATAGCCCCTCTGTCCGTTTGCTTCCA | + |
Preference number: 6 (lower is better) Translates to: PRELGLGSWLES*KAHSPSVRLLP Trigger: TGGAAGCAAACGGACAGAGGGGCTATGTGCCTTCCAACTTTCTAGCCAGGACCCCAAGCCCAACTCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | CTCAGTCTGGTGGTCTTCTTGGAAAGAGTATGTGTGTaGATGCGGGCCAGCCGCTCCCGAAGGCTCAGCTGC | + |
Preference number: 6 (lower is better) Translates to: LSLVVFLERVCV*MRASRSRRLSC Trigger: GCAGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACACATACTCTTTCCAAGAAGACCACCAGACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | CCTGCAGGCTGTCTCCTGCAGCCCTCGAAGGAACCTGCTGCTCACTaGGATGATGTCATCGATGTTGGAGAACAGGATGTCCAGATCGCC | + |
Preference number: 6 (lower is better) Translates to: PAGCLLQPSKEPAAH*DDVIDVGEQDVQIA Trigger: GGCGATCTGGACATCCTGTTCTCCAACATCGATGACATCATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS CAA 90 bp | AGCATCTGGCTCAGTCTGGTGGTCTTCTTGGAAAGAGTATGTGTGTaGATGCGGGCCAGCCGCTCCCGAAGGCTCAGCTGCTCCACTTTG | + |
Preference number: 6 (lower is better) Translates to: SIWLSLVVFLERVCV*MRASRSRRLSCSTL Trigger: CAAAGTGGAGCAGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACACATACTCTTTCCAAGAAGACCACCAGACTGAGCCAGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | ACGATTTGGCCCCGCAGCAGGGTCAGGTCCAGAGTCCCAGTCCCGTaGATGTTGCTTGACACCTGGTATAGCTTCTCAGGGCCATATCTG | + |
Preference number: 6 (lower is better) Translates to: TIWPRSRVRSRVPVP*MLLDTWYSFSGPYL Trigger: CAGATATGGCCCTGAGAAGCTATACCAGGTGTCAAGCAACATCAACGGGACTGGGACTCTGGACCTGACCCTGCTGCGGGGCCAAATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | GGGTCCTGGCTAGAAAGTTGGAAGGCACATAGCCCCTCTGTCCGTTaGCTTCCACCAGGCTCCATTCTGGGTTCCCCTTCTTGTCTTGGG | + |
Preference number: 6 (lower is better) Translates to: GSWLESWKAHSPSVR*LPPGSILGSPSCLG Trigger: CCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGCTATGTGCCTTCCAACTTTCTAGCCAGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 72 bp | TCAGTCTGGTGGTCTTCTTGGAAAGAGTATGTGTGTTaGTGCGGGCCAGCCGCTCCCGAAGGCTCAGCTGCT | + |
Preference number: 6 (lower is better) Translates to: SVWWSSWKEYVC*CGPAAPEGSAA Trigger: AGCAGCTGAGCCTTCGGGAGCGGCTGGCCCGCATCAACACACATACTCTTTCCAAGAAGACCACCAGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 72 bp | AGCAGAGCCATGGTGCTCTCTGCCCTTCGTAGCACTTaGTCGGCGAGGTCTCTCTGGAGGACCACAAATGTG | + |
Preference number: 6 (lower is better) Translates to: SRAMVLSALRST*SARSLWRTTNV Trigger: CACATTTGTGGTCCTCCAGAGAGACCTCGCCGATCAAGTGCTACGAAGGGCAGAGAGCACCATGGCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | CCTTCTCAAAGCTCTCCTGAAAGAGGCGGAGCTGACTaGTGCTCTGGCCTAGTGTGTGCTCCAGCAGCTTCT | + |
Preference number: 6 (lower is better) Translates to: PSQSSPERGGAD*CSGLVCAPAAS Trigger: AGAAGCTGCTGGAGCACACACTAGGCCAGAGCAGCAGTCAGCTCCGCCTCTTTCAGGAGAGCTTTGAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | TCACAGGCTGGCCTGCCTGTAGACTCAGTTCGTGGGTaGTTCTGGCCACAAAAGGGTATACTGCCACCACCT | + |
Preference number: 6 (lower is better) Translates to: SQAGLPVDSVRG*FWPQKGILPPP Trigger: AGGTGGTGGCAGTATACCCTTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGCCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | AGGATGTCCAGATCGCCTGGTGGCAGCTGTTGTAGGTaGCTTCTGATGTCAGAGGCACAGAGTCGGAGCATG | + |
Preference number: 6 (lower is better) Translates to: RMSRSPGGSCCR*LLMSEAQSRSM Trigger: CATGCTCCGACTCTGTGCCTCTGACATCAGAAGCCACCTACAACAGCTGCCACCAGGCGATCTGGACATCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS CCA 72 bp | CCTTTGGTATCCTTGTTTTGTAGAAGGGCCACGATTTaGCCCCGCAGCAGGGTCAGGTCCAGAGTCCCAGTC | + |
Preference number: 6 (lower is better) Translates to: PLVSLFCRRATI*PRSRVRSRVPV Trigger: GACTGGGACTCTGGACCTGACCCTGCTGCGGGGCCAAATCGTGGCCCTTCTACAAAACAAGGATACCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | GCTGGCCTGCCTGTAGACTCAGTTCGTGGGTGCTTCTaGCCACAAAAGGGTATACTGCCACCACCTGACTCA | + |
Preference number: 6 (lower is better) Translates to: AGLPVDSVRGCF*PQKGILPPPDS Trigger: TGAGTCAGGTGGTGGCAGTATACCCTTTTGTGGCCAGAAGCACCCACGAACTGAGTCTACAGGCAGGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | CCACAAAAGGGTATACTGCCACCACCTGACTCATGGTaGGGACAGTGGGAACAGAGAGCTGGGTGGGCTCTG | + |
Preference number: 6 (lower is better) Translates to: PQKGILPPPDSW*GQWEQRAGWAL Trigger: CAGAGCCCACCCAGCTCTCTGTTCCCACTGTCCCAACCATGAGTCAGGTGGTGGCAGTATACCCTTTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | TTTGCTTCCACCAGGCTCCATTCTGGGTTCCCCTTCTaGTCTTGGGCCTCTAGGATGGTCACAGGCTGGCCT | + |
Preference number: 6 (lower is better) Translates to: FASTRLHSGFPF*SWASRMVTGWP Trigger: AGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 72 bp | CTTAACCGCTGCTTAAACTGCAGAAAGGCATGGAGCTaGAGGTCCCTCGCTAGGCTGCAGTACTGCTCCGCA | + |
Preference number: 6 (lower is better) Translates to: LNRCLNCRKAWS*RSLARLQYCSA Trigger: TGCGGAGCAGTACTGCAGCCTAGCGAGGGACCTTCAGCTCCATGCCTTTCTGCAGTTTAAGCAGCGGTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS TCA 72 bp | GTGCTTCTGGCCACAAAAGGGTATACTGCCACCACCTaGCTCATGGTTGGGACAGTGGGAACAGAGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: VLLATKGYTATT*LMVGTVGTESW Trigger: CCAGCTCTCTGTTCCCACTGTCCCAACCATGAGTCAGGTGGTGGCAGTATACCCTTTTGTGGCCAGAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | CAGTTCGTGGGTGCTTCTGGCCACAAAAGGGTATACTaGCACCACCTGACTCATGGTTGGGACAGTGGGAAC | + |
Preference number: 6 (lower is better) Translates to: QFVGASGHKRVY*HHLTHGWDSGN Trigger: GTTCCCACTGTCCCAACCATGAGTCAGGTGGTGGCAGTATACCCTTTTGTGGCCAGAAGCACCCACGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | ATTCTGGGTTCCCCTTCTTGTCTTGGGCCTCTAGGATaGTCACAGGCTGGCCTGCCTGTAGACTCAGTTCGT | + |
Preference number: 6 (lower is better) Translates to: ILGSPSCLGPLG*SQAGLPVDSVR Trigger: ACGAACTGAGTCTACAGGCAGGCCAGCCTGTGACCATCCTAGAGGCCCAAGACAAGAAGGGGAACCCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | CGGTGTCCCCCTGTGTCTACCAGCCAGCGACTGTTGTaGCCTTTGGTATCCTTGTTTTGTAGAAGGGCCACG | + |
Preference number: 6 (lower is better) Translates to: RCPPVSTSQRLL*PLVSLFCRRAT Trigger: CGTGGCCCTTCTACAAAACAAGGATACCAAAGGCAACAACAGTCGCTGGCTGGTAGACACAGGGGGACACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | GGTGTCCCCCTGTGTCTACCAGCCAGCGACTGTTGTTaGCTTTGGTATCCTTGTTTTGTAGAAGGGCCACGA | + |
Preference number: 6 (lower is better) Translates to: GVPLCLPASDCC*LWYPCFVEGPR Trigger: TCGTGGCCCTTCTACAAAACAAGGATACCAAAGGCAACAACAGTCGCTGGCTGGTAGACACAGGGGGACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CCA 72 bp | CACAAGGAAGAAACTGAGACCCGAAGGTCCAGCTTGTaGCATGGCAGCTTCGATGATGCCCTGGATCTCCTT | + |
Preference number: 6 (lower is better) Translates to: HKEETETRRSSL*HGSFDDALDLL Trigger: AAGGAGATCCAGGGCATCATCGAAGCTGCCATGCCACAAGCTGGACCTTCGGGTCTCAGTTTCTTCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS CAA 72 bp | GATCACAAGGAAGAAACTGAGACCCGAAGGTCCAGCTaGTGGCATGGCAGCTTCGATGATGCCCTGGATCTC | + |
Preference number: 6 (lower is better) Translates to: DHKEETETRRSS*WHGSFDDALDL Trigger: GAGATCCAGGGCATCATCGAAGCTGCCATGCCACAAGCTGGACCTTCGGGTCTCAGTTTCTTCCTTGTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171629.3 |
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CDS CAA 72 bp | CTAGAAAGTTGGAAGGCACATAGCCCCTCTGTCCGTTaGCTTCCACCAGGCTCCATTCTGGGTTCCCCTTCT | + |
Preference number: 6 (lower is better) Translates to: LESWKAHSPSVR*LPPGSILGSPS Trigger: AGAAGGGGAACCCAGAATGGAGCCTGGTGGAAGCAAACGGACAGAGGGGCTATGTGCCTTCCAACTTTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS GCA 72 bp | TGGAATTCCAAGAATAAGTTACCAATCAGGTGCGCTTaGTCCTCTTCCCTGCAGGCTGTCTCCTGCAGCCCT | + |
Preference number: 6 (lower is better) Translates to: WNSKNKLPIRCA*SSSLQAVSCSP Trigger: AGGGCTGCAGGAGACAGCCTGCAGGGAAGAGGAGCAAGCGCACCTGATTGGTAACTTATTCTTGGAATTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS GCA 72 bp | GCGCTGGCATCTGCAGGTGTGTTCTCCAGAATTTTCTaGAGCAGGAGGGGGTACTTGGTAATCCTCTGTAGA | + |
Preference number: 6 (lower is better) Translates to: ALASAGVFSRIF*SRRGYLVILCR Trigger: TCTACAGAGGATTACCAAGTACCCCCTCCTGCTGCAGAAAATTCTGGAGAACACACCTGCAGATGCCAGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | TGTCTCCTGCAGCCCTCGAAGGAACCTGCTGCTCACTaGGATGATGTCATCGATGTTGGAGAACAGGATGTC | + |
Preference number: 6 (lower is better) Translates to: CLLQPSKEPAAH*DDVIDVGEQDV Trigger: GACATCCTGTTCTCCAACATCGATGACATCATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000237557.2 |
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CDS CCA 72 bp | TCCAGAGTCCCAGTCCCGTTGATGTTGCTTGACACCTaGTATAGCTTCTCAGGGCCATATCTGGTAAGGAGA | + |
Preference number: 6 (lower is better) Translates to: SRVPVPLMLLDT*YSFSGPYLVRR Trigger: TCTCCTTACCAGATATGGCCCTGAGAAGCTATACCAGGTGTCAAGCAACATCAACGGGACTGGGACTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | TCTGCAGGTGTGTTCTCCAGAATTTTCTGCAGCAGGAGGGGGTACTaGGTAATCCTCTGTAGAGGGATCACAAGGAAGAAACTGAGACCC | + |
Preference number: 6 (lower is better) Translates to: SAGVFSRIFCSRRGY*VILCRGITRKKLRP Trigger: GGGTCTCAGTTTCTTCCTTGTGATCCCTCTACAGAGGATTACCAAGTACCCCCTCCTGCTGCAGAAAATTCTGGAGAACACACCTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | AGCTGCTCCACTTTGGTATACTTTAAGGCCACTTCCTTGCGCATCTaGTATTCGTTGATATTGCCGTTCACATCCTGGAGGGCAGAGGTG | + |
Preference number: 6 (lower is better) Translates to: SCSTLVYFKATSLRI*YSLILPFTSWRAEV Trigger: CACCTCTGCCCTCCAGGATGTGAACGGCAATATCAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGTGGAGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 90 bp | CGAAGGCTCAGCTGCTCCACTTTGGTATACTTTAAGGCCACTTCCTaGCGCATCTTGTATTCGTTGATATTGCCGTTCACATCCTGGAGG | + |
Preference number: 6 (lower is better) Translates to: RRLSCSTLVYFKATS*RILYSLILPFTSWR Trigger: CCTCCAGGATGTGAACGGCAATATCAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGTGGAGCAGCTGAGCCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | GTGTTCTCCAGAATTTTCTGCAGCAGGAGGGGGTACTaGGTAATCCTCTGTAGAGGGATCACAAGGAAGAAA | + |
Preference number: 6 (lower is better) Translates to: VFSRIFCSRRGY*VILCRGITRKK Trigger: TTTCTTCCTTGTGATCCCTCTACAGAGGATTACCAAGTACCCCCTCCTGCTGCAGAAAATTCTGGAGAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | ACTTTGGTATACTTTAAGGCCACTTCCTTGCGCATCTaGTATTCGTTGATATTGCCGTTCACATCCTGGAGG | + |
Preference number: 6 (lower is better) Translates to: TLVYFKATSLRI*YSLILPFTSWR Trigger: CCTCCAGGATGTGAACGGCAATATCAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |
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CDS CAA 72 bp | AGCTGCTCCACTTTGGTATACTTTAAGGCCACTTCCTaGCGCATCTTGTATTCGTTGATATTGCCGTTCACA | + |
Preference number: 6 (lower is better) Translates to: SCSTLVYFKATS*RILYSLILPFT Trigger: TGTGAACGGCAATATCAACGAATACAAGATGCGCAAGGAAGTGGCCTTAAAGTATACCAAAGTGGAGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171629.3 ENSMUST00000236608.2 |