Pregenerated sensors for ARHGEF26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036885Ensembl transcript IDs: ENSMUST00000079300.13, ENSMUST00000161057.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCTTCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTaGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGAGACGTGT | + |
|
Preference number: 1 (lower is better) Translates to: LLHSCTYSYLQGLRA*NVFCKERHPRSETC Trigger: ACACGTCTCACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 90 bp | AGACCATACAAAGGAGAAACTCATGCGGAAGAGCAATGGTCTAAGTaGAGTGGGGACAGAGAGGCCAAGATACATCATCTTAGGAAACAG | + |
|
Preference number: 1 (lower is better) Translates to: RPYKGETHAEEQWSK*SGDREAKIHHLRKQ Trigger: CTGTTTCCTAAGATGATGTATCTTGGCCTCTCTGTCCCCACTTCACTTAGACCATTGCTCTTCCGCATGAGTTTCTCCTTTGTATGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 90 bp | TGTGTTACTGAAGGCAGAGCAATCTTATGTCAGCTCTTTAGCAGTTaGCCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: CVTEGRAILCQLFSS*PIISCLQDVLTYVS Trigger: GCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGGTCAACTGCTAAAGAGCTGACATAAGATTGCTCTGCCTTCAGTAACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 90 bp | GTATTTACAAAATGGACAATCTCAAAGACAAACTTGCTGGTGCTGTaGGACCATACAAAGGAGAAACTCATGCGGAAGAGCAATGGTCTA | + |
|
Preference number: 1 (lower is better) Translates to: VFTKWTISKTNLLVL*DHTKEKLMRKSNGL Trigger: TAGACCATTGCTCTTCCGCATGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTTTGTAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR CCA 90 bp | CACAAAAAGTATTTACAAAATGGACAATCTCAAAGACAAACTTGCTaGTGCTGTGAGACCATACAAAGGAGAAACTCATGCGGAAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: HKKYLQNGQSQRQTC*CCETIQRRNSCGRA Trigger: TGCTCTTCCGCATGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTTTGTAAATACTTTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR GCA 90 bp | AAAAAGTATTTACAAAATGGACAATCTCAAAGACAAACTTGCTGGTaGTGTGAGACCATACAAAGGAGAAACTCATGCGGAAGAGCAATG | + |
|
Preference number: 1 (lower is better) Translates to: KKYLQNGQSQRQTCW*CETIQRRNSCGRAM Trigger: CATTGCTCTTCCGCATGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTTTGTAAATACTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTTTCCAAAGTGCAGAATaGCTTGGCAAGCTTAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLFQSAE*LGKLRG Trigger: GCCTCTAAGCTTGCCAAGCCATTCTGCACTTTGGAA...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTGGAACCATGTGTTACTaGAGGCAGAGCAATCTTATG | + |
|
Preference number: 2 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLGTMCY*RQSNLM Trigger: CATAAGATTGCTCTGCCTTCAGTAACACATGGTTCC...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGACAGGAGTAGGGATATaGGACAAAGATCTGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKDSGPGMSFARKGIPEVTGVGI*DKDLRQ Trigger: CTGCCTCAGATCTTTGTCCCATATCCCTACTCCTGT...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR TCA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGGAGCAATGGTCTAAGTaGAGTGGGGACAGAGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HTYILGFWNLMLWVCLDREQWSK*SGDREA Trigger: GGCCTCTCTGTCCCCACTTCACTTAGACCATTGCTC...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGGAGGTTTACAAAACATaGCAGCTCACCTACCGAACT | + |
|
Preference number: 2 (lower is better) Translates to: SKDSGPGMSFARKGIPEVEVYKT*QLTYRT Trigger: AGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTC...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTTGGAATCTTATGCTTTaGGTGTGTTTAGACAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLWNLML*VCLDRS Trigger: ACTCCTGTCTAAACACACCCAAAGCATAAGATTCCA...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGATGGGCTTCTGGGTATaGGCCAAGCACACTTACATA | + |
|
Preference number: 2 (lower is better) Translates to: SFMYLLIPPRTQGLECLLMGFWV*AKHTYI Trigger: TATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCAT...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR GCA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATGCTGTTCTTCCAAAGTaGAGAATGGCTTGGCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PIISCLQDVLTYVSWKSHAVLPK*RMAWQA Trigger: AGCTTGCCAAGCCATTCTGCACTTTGGAAGAACAGC...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR TCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTTCATTATGCAAAAGCTaGGCTTTGTGGACTCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VPHLPSIKENGGRVQVSISLCKS*ALWTQC Trigger: GCACTGAGTCCACAAAGCTCAGCTTTTGCATAATGA...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTCAATTGAAAACAAGCAGAACTGTCAGGAACCATGTGTTACTGAAGGCACAGCTCTTTAGCAGTTaGCCCATAATATCCTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HFQLKTSRTVRNHVLLKAQLFSS*PIISCL Trigger: AAGACAGGATATTATGGGTCAACTGCTAAAGAGCTG...TGCCTTCAGTAACACATGGTTCCTGACAGTTCTGCTTGTTTTCAATTGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR CCA 90 bp | TTTCGTAGAAAGAGGTTTACAAAACATGACAGCTCACCTACCGAACTACTATTACAAAGACAAACTTGCTaGTGCTGTGAGACCATACAA | + |
|
Preference number: 2 (lower is better) Translates to: FRRKRFTKHDSSPTELLLQRQTC*CCETIQ Trigger: TTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTG...TAATAGTAGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTCTTTCTACGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCAATTGAAAACAAGCAGAACTGTCAGGAACCATGTGTTACTGAAGGCACTCACATACGTGAGCTaGAAATCCCATGTCATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: HFQLKTSRTVRNHVLLKALTYVS*KSHVIL Trigger: TAAAATGACATGGGATTTCCAGCTCACGTATGTGAG...TGCCTTCAGTAACACATGGTTCCTGACAGTTCTGCTTGTTTTCAATTGAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR GCA 72 bp | TCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTaGAAGGAAAGGCATCCCAGAAGTGAGACGTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SYLQGLRAWNVF*KERHPRSETCL Trigger: CAGACACGTCTCACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 72 bp | AAATGGACAATCTCAAAGACAAACTTGCTGGTGCTGTaGGACCATACAAAGGAGAAACTCATGCGGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KWTISKTNLLVL*DHTKEKLMRKS Trigger: GCTCTTCCGCATGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR CCA 72 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTaGGTGTGTTTAGACAGGAGTAGGGATATGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: HTYILGFWNLML*VCLDRSRDMGQ Trigger: TTGTCCCATATCCCTACTCCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 72 bp | GAAGGCAGAGCAATCTTATGTCAGCTCTTTAGCAGTTaGCCCATAATATCCTGTCTTCAGGATGTTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: EGRAILCQLFSS*PIISCLQDVLT Trigger: TGTGAGAACATCCTGAAGACAGGATATTATGGGTCAACTGCTAAAGAGCTGACATAAGATTGCTCTGCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR GCA 72 bp | TTACAAAATGGACAATCTCAAAGACAAACTTGCTGGTaGTGTGAGACCATACAAAGGAGAAACTCATGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQNGQSQRQTCW*CETIQRRNSCG Trigger: TCCGCATGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR GCA 72 bp | TTTTATAATCCTGGGACATCTCTTGCTGTGGACTACTaGTATTGCTTCATTCATGTACTTACTCATACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FYNPGTSLAVDY*YCFIHVLTHTS Trigger: GGAGGTATGAGTAAGTACATGAATGAAGCAATAGCAGTAGTCCACAGCAAGAGATGTCCCAGGATTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR CCA 72 bp | TATTTACAAAATGGACAATCTCAAAGACAAACTTGCTaGTGCTGTGAGACCATACAAAGGAGAAACTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: YLQNGQSQRQTC*CCETIQRRNSC Trigger: GCATGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTTTGTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR GCA 72 bp | AAGTATTTACAAAATGGACAATCTCAAAGACAAACTTaGTGGTGCTGTGAGACCATACAAAGGAGAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KYLQNGQSQRQT*WCCETIQRRNS Trigger: TGAGTTTCTCCTTTGTATGGTCTCACAGCACCAGCAAGTTTGTCTTTGAGATTGTCCATTTTGTAAATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 72 bp | GAGACTCCAAACCCATCTACCAGGTATTTAATGCAATaGATTCCTGCTAACATCAAAATATTTCAAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ETPNPSTRYLMQ*IPANIKIFQAS Trigger: ACTTGCTTGAAATATTTTGATGTTAGCAGGAATTCATTGCATTAAATACCTGGTAGATGGGTTTGGAGTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR TCA 72 bp | GCTATACAGGAACACTTTAGTAAGTGTTCAGCTGCTTaGTTTAAAGGATGCATATTTCCACACTGTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: AIQEHFSKCSAA*FKGCIFPHCLT Trigger: TGTTAAACAGTGTGGAAATATGCATCCTTTAAATCAAGCAGCTGAACACTTACTAAAGTGTTCCTGTATAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGGCTCTGGTACGACTGTaGCCGCGGCTTGCTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVALVRL*PRLAPA Trigger: AGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGC...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGACTGGAGCGGAGGGGTaGACCGTCTCCGCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVTGAEG*TVSATK Trigger: CTTTGTGGCGGAGACGGTCCACCCCTCCGCTCCAGT...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGACGCGGACCGGAGTCTaGGGCGTGGGAAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTYILGFWNLMLWVCLDRTRTGV*GVGRAA Trigger: GGCTGCCCTTCCCACGCCGCAGACTCCGGTCCGCGT...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGCCGGAGTCTGCGGCGTaGGAAGGGCAGCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFMYLLIPPRTQGLECLLPESAA*EGQPAP Trigger: AGGAGCTGGCTGCCCTTCCCACGCCGCAGACTCCGG...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTGTCAGGGTAAAGAGGTaGGTGGCAGAGCTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLVRVKR*VAELCL Trigger: AAGACAGAGCTCTGCCACTCACCTCTTTACCCTGAC...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATTGTGTCCCAGGGCTGTaGTCCAGCGGGCTCGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNCVPGL*SSGLAH Trigger: GTGAGCGAGCCCGCTGGATCACAGCCCTGGGACACA...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTCACAATTCTCTCCTCTaGCTTCTGCTCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLHNSLL*LLLLGL Trigger: GAGGCCAAGGAGCAGAAGGCAGAGGAGAGAATTGTG...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGAAGCTGGGGGCTCCTaGACACCGTCCTGTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNEAGGS*TPSCRP Trigger: CGGACGACAGGACGGTGTCCAGGAGCCCCCAGCTTC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATTGCGCGCTCAGAAGCTaGGGGCTCCTGGACACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PIISCLQDVLTYVSWKSHCALRS*GLLDTV Trigger: GACGGTGTCCAGGAGCCCCCAGCTTCTGAGCGCGCA...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGGGTGGTTCTGTCTGGTaGCTGTTTCCCACTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVGGSVW*LFPTAV Trigger: CACAGCAGTGGGAAACAGCCACCAGACAGAACCACC...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTGCAACTTCTGCAGCGTaGGCTGTTGGTAGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLATSAA*AVGRLH Trigger: ATGAAGTCTACCAACAGCGCACGCTGCAGAAGTTGC...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGCCTTCCTCCCCTTCGTaGCCCAAGGGTGCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTYILGFWNLMLWVCLDRPSSPS*PKGAPS Trigger: ACTGGGAGCACCCTTGGGCCACGAAGGGGAGGAAGG...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGACCTTCTCACTGGCATaGTTGCTGAGGACTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVTFSLA*LLRTVR Trigger: CCTGACAGTCCTCAGCAACCATGCCAGTGAGAAGGT...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGGGCCGCCGGGCTGTTaGTACTCAAAACCACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNGPPGC*YSKPRK Trigger: CTTCCGTGGTTTTGAGTACCAACAGCCCGGCGGCCC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATCCACCTGGGTCAGGGTaGTTCTGTCTGGTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIISCLQDVLTYVSWKSHPPGSG*FCLVAV Trigger: AACAGCCACCAGACAGAACCACCCTGACCCAGGTGG...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGTCCGCCACAAAGGGGTaGCGCCGTTGCTGGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFMYLLIPPRTQGLECLLSATKG*RRCWKN Trigger: ATTTTTCCAGCAACGGCGTCACCCCTTTGTGGCGGA...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGACCACGTCTGCCACCTaGAGGGAAAGTTCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFMYLLIPPRTQGLECLLTTSAT*RESSSG Trigger: GCCTGATGAACTTTCCCTGCAGGTGGCAGACGTGGT...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATCTGCCTTCTGCTCCTTaGCCTCTGGTTCCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNLPSAP*PLVPHQ Trigger: CTGATGAGGAACCAGAGGCCAAGGAGCAGAAGGCAG...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTAAGTCCCCAGCTGGCTaGCCAGTTTGTGATACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPSIKENGGRVQVSIKSPAG*PVCDTG Trigger: CCCAGTATCACAAACTGGTCAGCCAGCTGGGGACTT...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATCGCAGGGGCTTGTGGTaGATCACAATTCTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNRRGLW*ITILSS Trigger: AGAGGAGAGAATTGTGATTCACCACAAGCCCCTGCG...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATAAAGCCGCTGACCACTaGCCTTCTGTAAGACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNKAADH*PSVRRG Trigger: TCCACGTCTTACAGAAGGGCAGTGGTCAGCGGCTTT...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGGTTGGTAGACTTCATTaGTGCAGTATTTCACGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVVGRLH*CSISRR Trigger: CCTACGTGAAATACTGCACCAATGAAGTCTACCAAC...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | TTTCGTAGAAAGAGGTTTACAAAACATGACAGCTCACCTACCGAACTACTATTAGTAAGAAACCAGGGGTaGCTTGGGCCGTCGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRRKRFTKHDSSPTELLLVRNQG*LGPSES Trigger: CGACTCCGACGGCCCAAGTCACCCCTGGTTTCTTAC...TAATAGTAGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTCTTTCTACGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATCAAAATCAAAGCCGCTaGCCACTGCCCTTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PIISCLQDVLTYVSWKSHQNQSR*PLPFCK Trigger: CTTACAGAAGGGCAGTGGTCAGCGGCTTTGATTTTG...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | CATTTTCAATTGAAAACAAGCAGAACTGTCAGGAACCATGTGTTACTGAAGGCACTCTCCTCTGCCTTCTaGTCCTTGGCCTCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFQLKTSRTVRNHVLLKALSSAF*SLASGS Trigger: GGAACCAGAGGCCAAGGAGCAGAAGGCAGAGGAGAG...TGCCTTCAGTAACACATGGTTCCTGACAGTTCTGCTTGTTTTCAATTGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTAATGAGGACCACGTCTaGCACCTGCAGGGAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPSIKENGGRVQVSINEDHV*HLQGKF Trigger: GAACTTTCCCTGCAGGTGGCAGACGTGGTCCTCATT...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGTCTTCTTCTTTGAGCTaGTGGGACTGTCAAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVSSSLS*WDCQNQ Trigger: TTGATTTTGACAGTCCCACCAGCTCAAAGAAGAAGA...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGTTATCAATAGTAGCTTaGCATGTTATCTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKDSGPGMSFARKGIPEVLSIVA*HVISLA Trigger: TGCCAAGGAGATAACATGTCAAGCTACTATTGATAA...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGTTTGGGATAATCTGCTaGTTTCCCATCTTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTYILGFWNLMLWVCLDRFGIIC*FPILRA Trigger: GGCCCTCAAGATGGGAAAGCAGCAGATTATCCCAAA...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTTGGGAGGGCAGCCTTTaGAGTGGCAGTTTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPSIKENGGRVQVSIWEGSL*SGSFCS Trigger: AGAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCA...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGGAAGGGTTCTTCCCTaGAGAGGAATTAAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNGRVLP*RGIKLF Trigger: GAAGAGCTTAATTCCTCTCCAGGGAAGAACCCTTCC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATTTGAGTAAAGCATCGTaGAAGGGTTCTTCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIISCLQDVLTYVSWKSHLSKAS*KGSSLE Trigger: CTCCAGGGAAGAACCCTTCCACGATGCTTTACTCAA...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTTGGCAGTTTTTGTTCTaGAGACTTGTGTGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPSIKENGGRVQVSIWQFLF*RLVWES Trigger: GCTCTCCCACACAAGTCTTCAGAACAAAAACTGCCA...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGGGGTCAAAGGTGGATaGTGTGTGCTTTTCTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNGVKGG*CVLFYN Trigger: ATTGTAGAAAAGCACACAGCATCCACCTTTGACCCC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGGTAGACTTCATTGGTaGAGTATTTCACGTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNGRLHW*SISRRG Trigger: ACCCCTACGTGAAATACTGCACCAATGAAGTCTACC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGAGAGGCAAGGCTTTTTaGGATAATCTGCTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFMYLLIPPRTQGLECLLRGKAF*DNLLLS Trigger: GGAAAGCAGCAGATTATCCCAAAAAGCCTTGCCTCT...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGTTTGGACATCCTCTTaGAGAACAGCACTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNVWTSS*RTALCL Trigger: AAGACACAGTGCTGTTCTCCAAGAGGATGTCCAAAC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGAGTAGACCTGCTGTTTaGACATCCTCTTGGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFMYLLIPPRTQGLECLLSRPAV*TSSWRT Trigger: TGTTCTCCAAGAGGATGTCCAAACAGCAGGTCTACT...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTTGGGACTCCACGTTCTaGCTATTGGATTTACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPSIKENGGRVQVSIWDSTF*LLDLLS Trigger: ACTGAGTAAATCCAATAGTCAGAACGTGGAGTCCCA...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATAAGGTGGATGCTGTGTaGTTTTCTACAATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNKVDAV*FSTMSL Trigger: CAGTGACATTGTAGAAAAGCACACAGCATCCACCTT...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | CATTTTCAATTGAAAACAAGCAGAACTGTCAGGAACCATGTGTTACTGAAGGCATATGGGCAAGGCCATTaGCAATGGGCGAAGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: HFQLKTSRTVRNHVLLKAYGQGH*QWAKIP Trigger: AGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATA...TGCCTTCAGTAACACATGGTTCCTGACAGTTCTGCTTGTTTTCAATTGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TTTCGTAGAAAGAGGTTTACAAAACATGACAGCTCACCTACCGAACTACTATTACTTGGCACATTCCATTaGAAACCAGCCCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRRKRFTKHDSSPTELLLLGTFH*KPAPLS Trigger: GGAGAGAGGGGCTGGTTTCCAATGGAATGTGCCAAG...TAATAGTAGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTCTTTCTACGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGGACATGTTATCTCCTTaGCACATTCCATTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HTYILGFWNLMLWVCLDRDMLSP*HIPLET Trigger: GGTTTCCAATGGAATGTGCCAAGGAGATAACATGTC...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | TCATTCATGTACTTACTCATACCTCCAAGGACTCAGGGCCTGGAATGTCTTTTGTCAAGATCTCCAAGCTaGGTAAATAAGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFMYLLIPPRTQGLECLLSRSPS*VNKNAL Trigger: CAGAGCATTCTTATTTACTCAGCTTGGAGATCTTGA...CAAAAGACATTCCAGGCCCTGAGTCCTTGGAGGTATGAGTAAGTACATGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATGTTATTCTGATGTCTTaGTTCCAACTCTGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERPRYIILGNSGNGRSHNVILMS*FQLCEE Trigger: TTCTTCACAGAGTTGGAAGCAAGACATCAGAATAAC...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTATGAAGATGTTATTCTaGTGTCTTGCTTCCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHLPSIKENGGRVQVSIMKMLF*CLASNS Trigger: AGAGTTGGAAGCAAGACATCAGAATAACATCTTCAT...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR GCA 90 bp | TTTCGTAGAAAGAGGTTTACAAAACATGACAGCTCACCTACCGAACTACTATTACCTTCAAGGCCCTTTTaGAGACTTCATACTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRRKRFTKHDSSPTELLLPSRPF*RLHTLE Trigger: CTCCAAAGTATGAAGTCTGCAAAAGGGCCTTGAAGG...TAATAGTAGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTCTTTCTACGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TTTCGTAGAAAGAGGTTTACAAAACATGACAGCTCACCTACCGAACTACTATTATCTTCTTTGAGCTGGTaGGACTGTCAAAATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRRKRFTKHDSSPTELLLSSLSW*DCQNQS Trigger: GCTTTGATTTTGACAGTCCCACCAGCTCAAAGAAGA...TAATAGTAGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTCTTTCTACGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CCA 90 bp | TTTCGTAGAAAGAGGTTTACAAAACATGACAGCTCACCTACCGAACTACTATTAGCAGACTTCATACTTTaGAGAGTCCTTGGGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRRKRFTKHDSSPTELLLADFIL*RVLGCF Trigger: AAAACACCCAAGGACTCTCCAAAGTATGAAGTCTGC...TAATAGTAGTTCGGTAGGTGAGCTGTCATGTTTTGTAAACCTCTTTCTACGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| 3UTR CAA 72 bp | GAGCTGGAAATCCCATGTCATTTTAGTAGCTTAAGGTaGCAATGCTGTAGTTATCTAAGAACAATATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELEIPCHFSSLR*QCCSYLRTILN Trigger: ATTCAATATTGTTCTTAGATAACTACAGCATTGCAACCTTAAGCTACTAAAATGACATGGGATTTCCAGCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | GCCCGCTGGGGCTCTGGTACGACTGTGGCCGCGGCTTGCTCCGGCTaGGCAACTGGAGCGGAGGGGTGGACCGTCTCCGCCACAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARWGSGTTVAAACSG*ATGAEGWTVSATKG Trigger: CCCCTTTGTGGCGGAGACGGTCCACCCCTCCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | CATTGGTCACCGGCCTCCGATGCGCGCTCAGAAGCTGGGGGCTCCTaGACACCGTCCTGTCGTCCGGGTCGGCGGGTACGCGGACCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HWSPASDARSEAGGS*TPSCRPGRRVRGPE Trigger: CTCCGGTCCGCGTACCCGCCGACCCGGACGACAGGACGGTGTCCAGGAGCCCCCAGCTTCTGAGCGCGCATCGGAGGCCGGTGACCAATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | GGGCTCTGGTACGACTGTGGCCGCGGCTTGCTCCGGCTGAGCAACTaGAGCGGAGGGGTGGACCGTCTCCGCCACAAAGGGGTGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GLWYDCGRGLLRLSN*SGGVDRLRHKGVTP Trigger: CGGCGTCACCCCTTTGTGGCGGAGACGGTCCACCCCTCCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | AGGGAAGTCGGTGATCAGCAGCCCGCTGGGGCTCTGGTACGACTGTaGCCGCGGCTTGCTCCGGCTGAGCAACTGGAGCGGAGGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: REVGDQQPAGALVRL*PRLAPAEQLERRGG Trigger: TCCACCCCTCCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGCTGCTGATCACCGACTTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 90 bp | GCCGTCGGAGTCGAGGAGAAGCAGCTCTGTAGTCCGGGGACACCGTaGGACCATTGGTCACCGGCCTCCGATGCGCGCTCAGAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVGVEEKQLCSPGTP*DHWSPASDARSEAG Trigger: CCCAGCTTCTGAGCGCGCATCGGAGGCCGGTGACCAATGGTCGCACGGTGTCCCCGGACTACAGAGCTGCTTCTCCTCGACTCCGACGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | AGCTCCTCCACAGGGAAGTCGGTGATCAGCAGCCCGCTGGGGCTCTaGTACGACTGTGGCCGCGGCTTGCTCCGGCTGAGCAACTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSTGKSVISSPLGL*YDCGRGLLRLSNWS Trigger: GCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGCTGCTGATCACCGACTTCCCTGTGGAGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | GTCGAGGAGAAGCAGCTCTGTAGTCCGGGGACACCGTGCGACCATTaGTCACCGGCCTCCGATGCGCGCTCAGAAGCTGGGGGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VEEKQLCSPGTPCDH*SPASDARSEAGGSW Trigger: CCAGGAGCCCCCAGCTTCTGAGCGCGCATCGGAGGCCGGTGACCAATGGTCGCACGGTGTCCCCGGACTACAGAGCTGCTTCTCCTCGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | AGTGGACTTCGGGGAGCCGCCCGACGCCGCGTAAGAAACCAGGGGTaGCTTGGGCCGTCGGAGTCGAGGAGAAGCAGCTCTGTAGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLRGAARRRVRNQG*LGPSESRRSSSVVR Trigger: CCGGACTACAGAGCTGCTTCTCCTCGACTCCGACGGCCCAAGTCACCCCTGGTTTCTTACGCGGCGTCGGGCGGCTCCCCGAAGTCCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | CCGGGACTGTCCATGTCGTTGTCGACTTCGCCTTCCTCCCCTTCGTaGCCCAAGGGTGCTCCCAGTCCCTCCACCATGCTGCGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLSMSLSTSPSSPS*PKGAPSPSTMLRTL Trigger: CAAGGTGCGCAGCATGGTGGAGGGACTGGGAGCACCCTTGGGCCACGAAGGGGAGGAAGGCGAAGTCGACAACGACATGGACAGTCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | TGGTTCTGTCTGGTGGCTGTTTCCCACTGCTGTGTCCCAGGGCTGTaGTCCAGCGGGCTCGCTCACTCTGGGTCTCAGCGCCTAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WFCLVAVSHCCVPGL*SSGLAHSGSQRLVA Trigger: TGCTACTAGGCGCTGAGACCCAGAGTGAGCGAGCCCGCTGGATCACAGCCCTGGGACACAGCAGTGGGAAACAGCCACCAGACAGAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CCA 90 bp | CGGTTTTATGGGCAAGGCCATTGGCAATGGGCGAAGATACCTTACTaGCAGTCACCCCGGTGCAGTCCTCATCGGTGGCGCAAGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RFYGQGHWQWAKIPY*QSPRCSPHRWRKRP Trigger: CGGCCTCTTGCGCCACCGATGAGGACTGCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | CTTGAGGGCCGCCGGGCTGTTGGTACTCAAAACCACGGAAGGGTTTaGGAGCTCATTCCCTTGGGAGGGCAGCCTTTGGAGTGGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEGRRAVGTQNHGRV*ELIPLGGQPLEWQF Trigger: AAACTGCCACTCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCAAACCCTTCCGTGGTTTTGAGTACCAACAGCCCGGCGGCCCTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | CGTGGCCCAAGGGTGCTCCCAGTCCCTCCACCATGCTGCGCACCTTaGGAAGCCTCCTATGGGACTCCACGTTCTGACTATTGGATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RGPRVLPVPPPCCAP*EASYGTPRSDYWIY Trigger: GTAAATCCAATAGTCAGAACGTGGAGTCCCATAGGAGGCTTCTCAAGGTGCGCAGCATGGTGGAGGGACTGGGAGCACCCTTGGGCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | TCTGAGACAGCCCATTTCTTTTCACCGCGGAGAGCTGGCTCCACGTaGAGCGCAGGGGCTTGTGGTGAATCACAATTCTCTCCTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SETAHFFSPRRAGST*SAGACGESQFSPLP Trigger: AGGCAGAGGAGAGAATTGTGATTCACCACAAGCCCCTGCGCTCCACGTGGAGCCAGCTCTCCGCGGTGAAAAGAAATGGGCTGTCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | ATACTGGGCCAGATGAGTCGGTTTTATGGGCAAGGCCATTGGCAATaGGCGAAGATACCTTACTGGCAGTCACCCCGGTGCAGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ILGQMSRFYGQGHWQ*AKIPYWQSPRCSPH Trigger: ATGAGGACTGCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCGACTCATCTGGCCCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | ACCACGGAAGGGTTTGGGAGCTCATTCCCTTGGGAGGGCAGCCTTTaGAGTGGCAGTTTTTGTTCTGAAGACTTGTGTGGGAGAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTEGFGSSFPWEGSL*SGSFCSEDLCGRAG Trigger: TCCTGCTCTCCCACACAAGTCTTCAGAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCAAACCCTTCCGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | GAAGTCGTTCCCCTTCATACCAGCCATCGCCAACACGCTGATAAATaGGGACCACGTCTGCCACCTGCAGGGAAAGTTCATCAGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVVPLHTSHRQHADK*GPRLPPAGKVHQAV Trigger: AACAGCCTGATGAACTTTCCCTGCAGGTGGCAGACGTGGTCCTCATTTATCAGCGTGTTGGCGATGGCTGGTATGAAGGGGAACGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | TTTGTGATACTGGGCCAGATGAGTCGGTTTTATGGGCAAGGCCATTaGCAATGGGCGAAGATACCTTACTGGCAGTCACCCCGGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FVILGQMSRFYGQGH*QWAKIPYWQSPRCS Trigger: ACTGCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCGACTCATCTGGCCCAGTATCACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGCACAGTCGGACCAACTaGCTCACTTCCTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKDSGPGMSFARKGIPEVHSRTN*LTSFKA Trigger: GGCCTTGAAGGAAGTGAGCAAGTTGGTCCGACTGTG...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTTTCTCACTGGCATGGTaGCTGAGGACTGTCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLFSLAW*LRTVRV Trigger: TACCCTGACAGTCCTCAGCAACCATGCCAGTGAGAA...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | TGTTCTTCTTCTTTGAGCTGGTGGGACTGTCAAAATCAAAGCCGCTaGCCACTGCCCTTCTGTAAGACGTGGACCTCAAGCCTCGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSSLSWWDCQNQSR*PLPFCKTWTSSLAE Trigger: TTCGGCGAGGCTTGAGGTCCACGTCTTACAGAAGGGCAGTGGTCAGCGGCTTTGATTTTGACAGTCCCACCAGCTCAAAGAAGAAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTTGGCAGAGCTCTGTCTaGAGTAAAGCATCGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLWQSSV*SKASWK Trigger: CTTCCACGATGCTTTACTCAAGACAGAGCTCTGCCA...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | CTGTTGGTACTCAAAACCACGGAAGGGTTTGGGAGCTCATTCCCTTaGGAGGGCAGCCTTTGGAGTGGCAGTTTTTGTTCTGAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLKTTEGFGSSFP*EGSLWSGSFCSEDL Trigger: CAAGTCTTCAGAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCAAACCCTTCCGTGGTTTTGAGTACCAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTTTTTGTTCTGAAGACTaGTGTGGGAGAGCAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLFCSED*CGRAGE Trigger: CTCTCCTGCTCTCCCACACAAGTCTTCAGAACAAAA...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGTGGGAGCTCATTCCCTaGGGAGGGCAGCCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HTYILGFWNLMLWVCLDRWELIP*GGQPLE Trigger: CTCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCA...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTAGGGCCGCCGGGCTGTaGGTACTCAAAACCACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VPHLPSIKENGGRVQVSIRAAGL*VLKTTE Trigger: TTCCGTGGTTTTGAGTACCAACAGCCCGGCGGCCCT...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATACCATGCTGCGCACCTaGAGAAGCCTCCTATGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PIISCLQDVLTYVSWKSHTMLRT*RSLLWD Trigger: GTCCCATAGGAGGCTTCTCAAGGTGCGCAGCATGGT...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGTGGATGGGCTTCTGGGTATGAGCCAAGCACACTTACATACTGGGCTTTCCTTCAAGGCCCTTTaGCAGACTTCATACTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AEVDGLLGMSQAHLHTGLSFKAL*QTSYFG Trigger: TCCAAAGTATGAAGTCTGCAAAAGGGCCTTGAAGGA...AAGCCCAGTATGTAAGTGTGCTTGGCTCATACCCAGAAGCCCATCCACCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGACTCAGGGCCTGGAATGTCTTTTGCAAGGAAAGGCATCCCAGAAGTGACCAGGGGGAAAGGCTaGATTTTAAATTCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKDSGPGMSFARKGIPEVTRGKG*ILNSSW Trigger: CCAGCTGGAATTTAAAATCAAGCCTTTCCCCCTGGT...CACTTCTGGGATGCCTTTCCTTGCAAAAGACATTCCAGGCCCTGAGTCCTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 90 bp | CTGGGAATTAATCGTGTACATCATCTCTGTCCGCTCCATCTTCCGTaGTCCTTCATTGCACAGTCGGACCAACTTGCTCACTTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGINRVHHLCPLHLP*SFIAQSDQLAHFLQ Trigger: TTGAAGGAAGTGAGCAAGTTGGTCCGACTGTGCAATGAAGGAGCACGGAAGATGGAGCGGACAGAGATGATGTACACGATTAATTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CCA 90 bp | CGGGAAGAGGAGACCAGGGGGAAAGGCTTGATTTTAAATTCCAGCTaGGAATTAATCGTGTACATCATCTCTGTCCGCTCCATCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: REEETRGKGLILNSS*ELIVYIISVRSIFR Trigger: ACGGAAGATGGAGCGGACAGAGATGATGTACACGATTAATTCCCAGCTGGAATTTAAAATCAAGCCTTTCCCCCTGGTCTCCTCTTCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS-3UTR CAA 90 bp | CACACTTACATACTGGGCTTCTGGAATCTTATGCTTTGGGTGTGTTTAGACAGGTCTGCCTTCTGCTCCTaGGCCTCTGGTTCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HTYILGFWNLMLWVCLDRSAFCS*ASGSSS Trigger: TGATGAGGAACCAGAGGCCAAGGAGCAGAAGGCAGA...CCTGTCTAAACACACCCAAAGCATAAGATTCCAGAAGCCCAGTATGTAAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATCCTTGGCACATTCCATaGGAAACCAGCCCCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PIISCLQDVLTYVSWKSHPWHIP*ETSPSL Trigger: GAGAGAGGGGCTGGTTTCCAATGGAATGTGCCAAGG...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATTTGGGAGGGCAGCCTTaGGAGTGGCAGTTTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PIISCLQDVLTYVSWKSHLGGQP*EWQFLF Trigger: GAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAA...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATTTCCGTGCTCCTTCATaGCACAGTCGGACCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PIISCLQDVLTYVSWKSHFRAPS*HSRTNL Trigger: CAAGTTGGTCCGACTGTGCAATGAAGGAGCACGGAA...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 90 bp | GATTTACTCAGTTTAATTTCAGAGGCAAGGCTTTTTGGGATAATCTaGTGCTTTCCCATCTTGAGGGCCGCCGGGCTGTTGGTACTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLLSLISEARLFGII*CFPILRAAGLLVLK Trigger: TTTGAGTACCAACAGCCCGGCGGCCCTCAAGATGGGAAAGCAGCAGATTATCCCAAAAAGCCTTGCCTCTGAAATTAAACTGAGTAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 90 bp | GGGAGAATGAGAAAAGAGATCATAGGTAAGTTCCTGCAGTCTTCATaGGACTCGATCCTCGACAACACTTCCTTAAAGGACGGGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRMRKEIIGKFLQSS*DSILDNTSLKDGLV Trigger: AACCAACCCGTCCTTTAAGGAAGTGTTGTCGAGGATCGAGTCCCATGAAGACTGCAGGAACTTACCTATGATCTCTTTTCTCATTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCTCACCTTCCTTCTATTAAGGAAAATGGTGGCAGAGTTCAAGTGTCAATTTTATGGGCAAGGCCATaGGCAATGGGCGAAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: VPHLPSIKENGGRVQVSILWARP*AMGEDT Trigger: GGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAA...AATTGACACTTGAACTCTGCCACCATTTTCCTTAATAGAAGGAAGGTGAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 90 bp | ACCATGCTGCGCACCTTGAGAAGCCTCCTATGGGACTCCACGTTCTaGCTATTGGATTTACTCAGTTTAATTTCAGAGGCAAGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TMLRTLRSLLWDSTF*LLDLLSLISEARLF Trigger: AAAAAGCCTTGCCTCTGAAATTAAACTGAGTAAATCCAATAGTCAGAACGTGGAGTCCCATAGGAGGCTTCTCAAGGTGCGCAGCATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CATTTTCAATTGAAAACAAGCAGAACTGTCAGGAACCATGTGTTACTGAAGGCAAAAGGGGTGACGCCGTaGCTGGAAAAATCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HFQLKTSRTVRNHVLLKAKGVTP*LEKSTS Trigger: CGAGGTGGATTTTTCCAGCAACGGCGTCACCCCTTT...TGCCTTCAGTAACACATGGTTCCTGACAGTTCTGCTTGTTTTCAATTGAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATTGTTTGGACATCCTCTaGGAGAACAGCACTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERPRYIILGNSGNGRSHNCLDIL*ENSTVS Trigger: AGACACAGTGCTGTTCTCCAAGAGGATGTCCAAACA...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CCCATAATATCCTGTCTTCAGGATGTTCTCACATACGTGAGCTGGAAATCCCATAGTTCATCAGGCTGTTaGGCAGTAAAAGACCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PIISCLQDVLTYVSWKSHSSSGC*AVKDLM Trigger: CATTAGGTCTTTTACTGCCAAACAGCCTGATGAACT...ATGGGATTTCCAGCTCACGTATGTGAGAACATCCTGAAGACAGGATATTATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | GAGAGGCCAAGATACATCATCTTAGGAAACAGTGGAAATGGTAGGAGCCACAATCTTATCAATAGTAGCTaGACATGTTATCTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ERPRYIILGNSGNGRSHNLINSS*TCYLLG Trigger: GCCAAGGAGATAACATGTCAAGCTACTATTGATAAG...ATTGTGGCTCCTACCATTTCCACTGTTTCCTAAGATGATGTATCTTGGCCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS-3UTR CAA 90 bp | CATTTTCAATTGAAAACAAGCAGAACTGTCAGGAACCATGTGTTACTGAAGGCAGTCCTTGGGTGTTTTTaGACAGATAGTATCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFQLKTSRTVRNHVLLKAVLGCF*TDSIHQ Trigger: CTGATGGATACTATCTGTCAAAAAACACCCAAGGAC...TGCCTTCAGTAACACATGGTTCCTGACAGTTCTGCTTGTTTTCAATTGAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | CCGGCCTCCGATGCGCGCTCAGAAGCTGGGGGCTCCTaGACACCGTCCTGTCGTCCGGGTCGGCGGGTACGC | + |
|
Preference number: 6 (lower is better) Translates to: PASDARSEAGGS*TPSCRPGRRVR Trigger: GCGTACCCGCCGACCCGGACGACAGGACGGTGTCCAGGAGCCCCCAGCTTCTGAGCGCGCATCGGAGGCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 72 bp | GGCTCTGGTACGACTGTGGCCGCGGCTTGCTCCGGCTaGGCAACTGGAGCGGAGGGGTGGACCGTCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSGTTVAAACSG*ATGAEGWTVSA Trigger: GGCGGAGACGGTCCACCCCTCCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 72 bp | AGCCCGCTGGGGCTCTGGTACGACTGTGGCCGCGGCTaGCTCCGGCTGAGCAACTGGAGCGGAGGGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPLGLWYDCGRG*LRLSNWSGGVD Trigger: GTCCACCCCTCCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 90 bp | GTGATCAGCAGCCCGCTGGGGCTCTGGTACGACTGTGGCCGCGGCTaGCTCCGGCTGAGCAACTGGAGCGGAGGGGTGGACCGTCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VISSPLGLWYDCGRG*LRLSNWSGGVDRLR Trigger: GCGGAGACGGTCCACCCCTCCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGCTGCTGATCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 72 bp | GGGGACACCGTGCGACCATTGGTCACCGGCCTCCGATaGGCGCTCAGAAGCTGGGGGCTCCTGGACACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDTVRPLVTGLR*ALRSWGLLDTV Trigger: GACGGTGTCCAGGAGCCCCCAGCTTCTGAGCGCGCATCGGAGGCCGGTGACCAATGGTCGCACGGTGTCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | GGTGATCAGCAGCCCGCTGGGGCTCTGGTACGACTGTaGCCGCGGCTTGCTCCGGCTGAGCAACTGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GDQQPAGALVRL*PRLAPAEQLER Trigger: CCGCTCCAGTTGCTCAGCCGGAGCAAGCCGCGGCCACAGTCGTACCAGAGCCCCAGCGGGCTGCTGATCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 72 bp | CGGGGAGCCGCCCGACGCCGCGTAAGAAACCAGGGGTaGCTTGGGCCGTCGGAGTCGAGGAGAAGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGAARRRVRNQG*LGPSESRRSSS Trigger: AGAGCTGCTTCTCCTCGACTCCGACGGCCCAAGTCACCCCTGGTTTCTTACGCGGCGTCGGGCGGCTCCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 90 bp | GTGGACCTCAAGCCTCGCCGAAGGGAGCCGGGACTGTCCATGTCGTaGTCGACTTCGCCTTCCTCCCCTTCGTGGCCCAAGGGTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VDLKPRRREPGLSMS*STSPSSPSWPKGAP Trigger: GGGAGCACCCTTGGGCCACGAAGGGGAGGAAGGCGAAGTCGACAACGACATGGACAGTCCCGGCTCCCTTCGGCGAGGCTTGAGGTCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | AGCCGCCCGACGCCGCGTAAGAAACCAGGGGTGACTTaGGCCGTCGGAGTCGAGGAGAAGCAGCTCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRPTPRKKPGVT*AVGVEEKQLCS Trigger: ACTACAGAGCTGCTTCTCCTCGACTCCGACGGCCCAAGTCACCCCTGGTTTCTTACGCGGCGTCGGGCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | GGGCAAGGCCATTGGCAATGGGCGAAGATACCTTACTaGCAGTCACCCCGGTGCAGTCCTCATCGGTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GQGHWQWAKIPY*QSPRCSPHRWR Trigger: GCGCCACCGATGAGGACTGCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | TCCATGTCGTTGTCGACTTCGCCTTCCTCCCCTTCGTaGCCCAAGGGTGCTCCCAGTCCCTCCACCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SMSLSTSPSSPS*PKGAPSPSTML Trigger: CAGCATGGTGGAGGGACTGGGAGCACCCTTGGGCCACGAAGGGGAGGAAGGCGAAGTCGACAACGACATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 72 bp | AGTCTCGAGGGGGCCAGCTCCAAGTCCCCAGCTGGCTaGCCAGTTTGTGATACTGGGCCAGATGAGTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLEGASSKSPAG*PVCDTGPDESV Trigger: AACCGACTCATCTGGCCCAGTATCACAAACTGGTCAGCCAGCTGGGGACTTGGAGCTGGCCCCCTCGAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 72 bp | CCGCCGGGCTGTTGGTACTCAAAACCACGGAAGGGTTaGGGAGCTCATTCCCTTGGGAGGGCAGCCTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPGCWYSKPRKG*GAHSLGRAAFG Trigger: TCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCAAACCCTTCCGTGGTTTTGAGTACCAACAGCCCGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 90 bp | CCTTGGGAGGGCAGCCTTTGGAGTGGCAGTTTTTGTTCTGAAGACTaGTGTGGGAGAGCAGGAGAGAGTCTCGAGGGGGCCAGCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PWEGSLWSGSFCSED*CGRAGESLEGASSK Trigger: CTTGGAGCTGGCCCCCTCGAGACTCTCTCCTGCTCTCCCACACAAGTCTTCAGAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 72 bp | AGGGTGCTCCCAGTCCCTCCACCATGCTGCGCACCTTaGGAAGCCTCCTATGGGACTCCACGTTCTGACTAT | + |
|
Preference number: 6 (lower is better) Translates to: RVLPVPPPCCAP*EASYGTPRSDY Trigger: ATAGTCAGAACGTGGAGTCCCATAGGAGGCTTCTCAAGGTGCGCAGCATGGTGGAGGGACTGGGAGCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 72 bp | GCTGGTGGGACTGTCAAAATCAAAGCCGCTGACCACTaGCCTTCTGTAAGACGTGGACCTCAAGCCTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGGTVKIKAADH*PSVRRGPQASP Trigger: CGGCGAGGCTTGAGGTCCACGTCTTACAGAAGGGCAGTGGTCAGCGGCTTTGATTTTGACAGTCCCACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | GCCCATTTCTTTTCACCGCGGAGAGCTGGCTCCACGTaGAGCGCAGGGGCTTGTGGTGAATCACAATTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AHFFSPRRAGST*SAGACGESQFS Trigger: AGAGAATTGTGATTCACCACAAGCCCCTGCGCTCCACGTGGAGCCAGCTCTCCGCGGTGAAAAGAAATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | CAGATGAGTCGGTTTTATGGGCAAGGCCATTGGCAATaGGCGAAGATACCTTACTGGCAGTCACCCCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QMSRFYGQGHWQ*AKIPYWQSPRC Trigger: GCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCGACTCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | CTGGGCCAGATGAGTCGGTTTTATGGGCAAGGCCATTaGCAATGGGCGAAGATACCTTACTGGCAGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LGQMSRFYGQGH*QWAKIPYWQSP Trigger: GGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCGACTCATCTGGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | AATGATTTCCACCTGGGTCAGGGTGGTTCTGTCTGGTaGCTGTTTCCCACTGCTGTGTCCCAGGGCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NDFHLGQGGSVW*LFPTAVSQGCD Trigger: ATCACAGCCCTGGGACACAGCAGTGGGAAACAGCCACCAGACAGAACCACCCTGACCCAGGTGGAAATCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 90 bp | GTTTGTGATACTGGGCCAGATGAGTCGGTTTTATGGGCAAGGCCATaGGCAATGGGCGAAGATACCTTACTGGCAGTCACCCCGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VCDTGPDESVLWARP*AMGEDTLLAVTPVQ Trigger: CTGCACCGGGGTGACTGCCAGTAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCGACTCATCTGGCCCAGTATCACAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS TCA 72 bp | CCCCTTCATACCAGCCATCGCCAACACGCTGATAAATaGGGACCACGTCTGCCACCTGCAGGGAAAGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLHTSHRQHADK*GPRLPPAGKVH Trigger: ATGAACTTTCCCTGCAGGTGGCAGACGTGGTCCTCATTTATCAGCGTGTTGGCGATGGCTGGTATGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 72 bp | GACTCGATCCTCGACAACACTTCCTTAAAGGACGGGTaGGTTGCTAGCAACTTCTGCAGCGTGCGCTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSILDNTSLKDG*VASNFCSVRCW Trigger: CCAACAGCGCACGCTGCAGAAGTTGCTAGCAACCAACCCGTCCTTTAAGGAAGTGTTGTCGAGGATCGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS GCA 72 bp | TCATCTCTGTCCGCTCCATCTTCCGTGCTCCTTCATTaGACAGTCGGACCAACTTGCTCACTTCCTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSAPSSVLLH*TVGPTCSLPSR Trigger: CCTTGAAGGAAGTGAGCAAGTTGGTCCGACTGTGCAATGAAGGAGCACGGAAGATGGAGCGGACAGAGATGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CCA 72 bp | CTCAAAACCACGGAAGGGTTTGGGAGCTCATTCCCTTaGGAGGGCAGCCTTTGGAGTGGCAGTTTTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKTTEGFGSSFP*EGSLWSGSFCS Trigger: AGAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCAAACCCTTCCGTGGTTTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CAA 72 bp | ACTCAAAACCACGGAAGGGTTTGGGAGCTCATTCCCTaGGGAGGGCAGCCTTTGGAGTGGCAGTTTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TQNHGRVWELIP*GGQPLEWQFLF Trigger: GAACAAAAACTGCCACTCCAAAGGCTGCCCTCCCAAGGGAATGAGCTCCCAAACCCTTCCGTGGTTTTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 72 bp | AATCGTGTACATCATCTCTGTCCGCTCCATCTTCCGTaGTCCTTCATTGCACAGTCGGACCAACTTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: NRVHHLCPLHLP*SFIAQSDQLAH Trigger: GTGAGCAAGTTGGTCCGACTGTGCAATGAAGGAGCACGGAAGATGGAGCGGACAGAGATGATGTACACGATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CCA 72 bp | GGCTGTTTGGCAGTAAAAGACCTAATGATTTCCACCTaGGTCAGGGTGGTTCTGTCTGGTGGCTGTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GCLAVKDLMIST*VRVVLSGGCFP Trigger: TGGGAAACAGCCACCAGACAGAACCACCCTGACCCAGGTGGAAATCATTAGGTCTTTTACTGCCAAACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS GCA 72 bp | TTAATTTCAGAGGCAAGGCTTTTTGGGATAATCTGCTaGTTTCCCATCTTGAGGGCCGCCGGGCTGTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LISEARLFGIIC*FPILRAAGLLV Trigger: TACCAACAGCCCGGCGGCCCTCAAGATGGGAAAGCAGCAGATTATCCCAAAAAGCCTTGCCTCTGAAATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | CCAGTTTGTGATACTGGGCCAGATGAGTCGGTTTTATaGGCAAGGCCATTGGCAATGGGCGAAGATACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PVCDTGPDESVL*ARPLAMGEDTL Trigger: TAAGGTATCTTCGCCCATTGCCAATGGCCTTGCCCATAAAACCGACTCATCTGGCCCAGTATCACAAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | ACAGGAAGAAGTAGACCTGCTGTTTGGACATCCTCTTaGAGAACAGCACTGTGTCTTCCACATAGGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRSRPAVWTSS*RTALCLPHRLS Trigger: TGACAGCCTATGTGGAAGACACAGTGCTGTTCTCCAAGAGGATGTCCAAACAGCAGGTCTACTTCTTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CAA 72 bp | AGTCGGACCAACTTGCTCACTTCCTTCAAGGCCCTTTaGCAGACTTCATACTTTGGAGAGTCCTTGGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRTNLLTSFKAL*QTSYFGESLGV Trigger: AACACCCAAGGACTCTCCAAAGTATGAAGTCTGCAAAAGGGCCTTGAAGGAAGTGAGCAAGTTGGTCCGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CCA 72 bp | GAGACCAGGGGGAAAGGCTTGATTTTAAATTCCAGCTaGGAATTAATCGTGTACATCATCTCTGTCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETRGKGLILNSS*ELIVYIISVRS Trigger: GGAGCGGACAGAGATGATGTACACGATTAATTCCCAGCTGGAATTTAAAATCAAGCCTTTCCCCCTGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CAA 72 bp | GCAGACTTCATACTTTGGAGAGTCCTTGGGTGTTTTTaGACAGATAGTATCCATCAGCAGGGGAAGGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ADFILWRVLGCF*TDSIHQQGKAC Trigger: ACACGCCTTCCCCTGCTGATGGATACTATCTGTCAAAAAACACCCAAGGACTCTCCAAAGTATGAAGTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS TCA 72 bp | CGCACCTTGAGAAGCCTCCTATGGGACTCCACGTTCTaGCTATTGGATTTACTCAGTTTAATTTCAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTLRSLLWDSTF*LLDLLSLISEA Trigger: TGCCTCTGAAATTAAACTGAGTAAATCCAATAGTCAGAACGTGGAGTCCCATAGGAGGCTTCTCAAGGTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||
| CDS CCA 72 bp | AGAAAAGAGATCATAGGTAAGTTCCTGCAGTCTTCATaGGACTCGATCCTCGACAACACTTCCTTAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RKEIIGKFLQSS*DSILDNTSLKD Trigger: GTCCTTTAAGGAAGTGTTGTCGAGGATCGAGTCCCATGAAGACTGCAGGAACTTACCTATGATCTCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079300.13 ENSMUST00000161057.2 |
||
| CDS CAA 72 bp | TCGTCCCATCCTCTCCACATTCTTATCAATAGTAGCTaGACATGTTATCTCCTTGGCACATTCCATTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSHPLHILINSS*TCYLLGTFHWK Trigger: TTTCCAATGGAATGTGCCAAGGAGATAACATGTCAAGCTACTATTGATAAGAATGTGGAGAGGATGGGACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079300.13 |
||