Pregenerated sensors for ARHGEF19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028919Ensembl transcript IDs: ENSMUST00000006618.9, ENSMUST00000125392.8, ENSMUST00000135623.3, ENSMUST00000138096.8, ENSMUST00000141834.9, ENSMUST00000147903.3
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGAGGTTaGGTTGTGAGCCTGGCCTCTGAGCTGTGCTTTGATAGTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: MGPRHHLLLEPSPGG*VVSLASELCFDSFK Trigger: CTTGAAACTATCAAAGCACAGCTCAGAGGCCAGGCTCACAACTCAACCTCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR TCA 90 bp | ACCACAAAGTTCACAGAGGCAAAGAGCGATTCTCTCCTGAAATCCTaGTGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TTKFTEAKSDSLLKS*WGPGITSSWSPAQE Trigger: CTCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGGAGAGAATCGCTCTTTGCCTCTGTGAACTTTGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR GCA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTaGCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TLLLGGQSSRLRQPL*PRDTWRPVTAGTAS Trigger: GCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR TCA 90 bp | CACTGGCAACCACAAAGTTCACAGAGGCAAAGAGCGATTCTCTCCTaGAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: HWQPQSSQRQRAILS*NPDGAPASPPPGAQ Trigger: CTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGGAGAGAATCGCTCTTTGCCTCTGTGAACTTTGTGGTTGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGACTGGCCTCTGAGCTGTaGTTTGATAGTTTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PEILMGPRHHLLLEPSPGLASEL*FDSFKA Trigger: GGCCTTGAAACTATCAAAGCACAGCTCAGAGGCCAG...TCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR CAA 90 bp | CTGCTTGGATCTGACACTTTGCTACTTGGAGGACAAAGTAGCAGGTaGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: LLGSDTLLLGGQSSR*RQPLCPRDTWRPVT Trigger: TGTCACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGTGTCAGATCCAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR-3UTR CCA 90 bp | AACAACAAAACAGGGAAGATGTATGTTTGTAGATGGTTTTTCCAGGGTAGTGATGCAAGTGCCGCTCACTaGCAACCACAAAGTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: NNKTGKMYVCRWFFQGSDASAAH*QPQSSQ Trigger: CTGTGAACTTTGTGGTTGCCAGTGAGCGGCACTTGC...ATCACTACCCTGGAAAAACCATCTACAAACATACATCTTCCCTGTTTTGTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR GCA 72 bp | CTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTaGCCACGGGACACCTGGAGACCAGTGACAGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LGGQSSRLRQPL*PRDTWRPVTAG Trigger: TCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR TCA 72 bp | CTGACACTTTGCTACTTGGAGGACAAAGTAGCAGGTTaGGGCAGCCCCTCTGCCCACGGGACACCTGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LTLCYLEDKVAG*GSPSAHGTPGD Trigger: GTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| 3UTR TCA 72 bp | TTCACAGAGGCAAAGAGCGATTCTCTCCTGAAATCCTaGTGGGGCCCCGGCATCACCTCCTCCTGGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FTEAKSDSLLKS*WGPGITSSWSP Trigger: TGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGGAGAGAATCGCTCTTTGCCTCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | AAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCCCTCCTCCTCACGCTaGTGCCGCCGCAACTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: KAALRHTEATRTRVAPAGPSSSR*CRRNSR Trigger: GCGCGAGTTGCGGCGGCAGCAGCGTGAGGAGGAGGG...CCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | GAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCGCGCGGAAAGAGCTaGTCGGGGAGAGGTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: EGGPQTHRGHPHPSGPSWARGKS*SGRGWR Trigger: GCGCCAACCTCTCCCCGAGCAGCTCTTTCCGCGCGC...CCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | GAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGACAGTGAGGCCAGCTaGCAGCCCTGCCGGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: EGGPQTHRGHPHPSGPSWDSEAS*QPCRVS Trigger: TGAGACCCGGCAGGGCTGGCAGCTGGCCTCACTGTC...CCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | GACTGTGAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCCCCTGGTGGCAGTGCTaGGCCCCAAGCGCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DCEGGPQTHRGHPHPSGPPWWQC*APSAER Trigger: CCTCTCTGCGCTTGGGGCGCAGCACTGCCACCAGGG...GGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTCACAGTC 70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | AAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCACAGAGCCTGCTCTTaGGCAGCCTGGCCAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KAALRHTEATRTRVAPAGHRACS*AAWPVS Trigger: GGAGACTGGCCAGGCTGCGCAAGAGCAGGCTCTGTG...CCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | GACTGTGAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCTGGCCTCCTGCAGCTTaGAGTCGCGCAGGCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: DCEGGPQTHRGHPHPSGPWPPAA*SRAGSA Trigger: CGCTGAGCCTGCGCGACTGCAAGCTGCAGGAGGCCA...GGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTCACAGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | TGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTCCTGGCGCGCTGCCCGTaGAGCAGCCTGAGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CPRDTWRPVTAGTASPALLARCP*SSLSRN Trigger: GTTCCTGCTCAGGCTGCTGCACGGGCAGCGCGCCAG...GAGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | AGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCCCCAGCAGAGCTTCTCTGAGCCACTGTaGCTGGCCCTGCGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RHTEATRTRVAPAGPQQSFSEPL*LALRWG Trigger: GCCCCAACGCAGGGCCAGCCACAGTGGCTCAGAGAA...GCTCTGCTGGGGCCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | GCATCACCTCCTCCTGGAGCCCAGCCCAGGAGGTTGAGTTGTGAGCCTGGCCTCCGCGCAGGCTCAGCGTaGCCAGGACGCCACTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASPPPGAQPRRLSCEPGLRAGSA*PGRHCR Trigger: GCGGCAGTGGCGTCCTGGCCACGCTGAGCCTGCGCG...GAGGCCAGGCTCACAACTCAACCTCCTGGGCTGGGCTCCAGGAGGAGGTGATGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | AGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCCCCAGCAGAGCGCCATGTCCTCATCTTaGGAGCCCGGTGCTGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: RHTEATRTRVAPAGPQQSAMSSS*EPGAVR Trigger: GCGGACAGCACCGGGCTCCCAAGATGAGGACATGGC...GCTCTGCTGGGGCCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR TCA 90 bp | AGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCCCCAGCAGAGCACGGAACCTAAGAAGTaGCCCACGGCCACCGACAGG | + |
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Preference number: 4 (lower is better) Translates to: RHTEATRTRVAPAGPQQSTEPKK*PTATDR Trigger: CCTGTCGGTGGCCGTGGGTCACTTCTTAGGTTCCGT...GCTCTGCTGGGGCCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR TCA 90 bp | GACTGTGAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCCCACATCGCACACGCTaGAGCGCAGCACATCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DCEGGPQTHRGHPHPSGPPHRTR*SAAHRP Trigger: AGGCCGATGTGCTGCGCTTCAGCGTGTGCGATGTGG...GGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTCACAGTC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | CCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGACTGGGCGACGGGCGGTaGCAGGTGGTCCAGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PEILMGPRHHLLLEPSPGLGDGR*QVVQPS Trigger: ACTTGGCTGGACCACCTGGCACCGCCCGTCGCCCAG...TCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCTGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGAACCCTGGTGGCAGTaGTGCGCCCCAAGCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PLCPRDTWRPVTAGTASPEPWWQ*CAPSAE Trigger: CTCTGCGCTTGGGGCGCAGCACTGCCACCAGGGTTC...GGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | AAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGGTCCGCTTCATGGACTaGACGCTCGCGTTGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: KAALRHTEATRTRVAPAGVRFMD*TLALHS Trigger: GGAGTGCAACGCGAGCGTGCAGTCCATGAAGCGGAC...CCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | TGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTCGCCACAGCGAGAAGGTaGAGCCCCGCGTCGAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: CPRDTWRPVTAGTASPALATARR*SPASSV Trigger: AACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGC...GAGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | AGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCCCCAGCAGAGCGTGAGAGGCAGCCGCTaGCACACAGGAGACTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RHTEATRTRVAPAGPQQSVRGSR*HTGDSS Trigger: AGAGGAGTCTCCTGTGTGCCAGCGGCTGCCTCTCAC...GCTCTGCTGGGGCCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | GACTGTGAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCGGCCATAACAGTCCTTaGAGAGGGGCAGGGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: DCEGGPQTHRGHPHPSGPGHNSP*RGAGVA Trigger: GGCAACCCCTGCCCCTCTCCAAGGACTGTTATGGCC...GGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTCACAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | GAGCGATTCTCTCCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGGCTCTCAGCAGCAGCTaGTGCCTGGCGCGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ERFSPEILMGPRHHLLLEALSSS*CLARCP Trigger: CGGGCAGCGCGCCAGGCACCAGCTGCTGCTGAGAGC...CTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGGAGAGAATCGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | GAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGATCTCCTTGTCCTCCTaGGGGCTGGATGGTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: EGGPQTHRGHPHPSGPSWISLSS*GLDGLK Trigger: CTTGAGACCATCCAGCCCCCAGGAGGACAAGGAGAT...CCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR TCA 90 bp | CCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGAAGCCACTGCTTGTCCTaGGTCCCCAGACACTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: PEILMGPRHHLLLEPSPGSHCLS*VPRHSL Trigger: GAGCGAGTGTCTGGGGACTCAGGACAAGCAGTGGCT...TCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTGCTCCTTTAGAGCGCTaGAGGCCTTGGTGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: LPTGHLETSDSRNSQPRPAPLER*RPWWPC Trigger: ACATGGCCACCAAGGCCTTCAGCGCTCTAAAGGAGC...AGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR TCA 90 bp | AAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCAGTCATTGAAGAGGTaGAGGTACACGGCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KAALRHTEATRTRVAPAGQSLKR*RYTALL Trigger: CAGCAAGGCCGTGTACCTTCACCTCTTCAATGACTG...CCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR TCA 90 bp | GACTGTGAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCCTTCCCCATCACATGTaGTCTCCTTGTCCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DCEGGPQTHRGHPHPSGPLPHHM*SPCPPG Trigger: CCCAGGAGGACAAGGAGATCACATGTGATGGGGAAG...GGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTCACAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | GCATCACCTCCTCCTGGAGCCCAGCCCAGGAGGTTGAGTTGTGAGCCTGGCCTCCACTGTGGCTGGCCCTaGGTTGGGGCTGCATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ASPPPGAQPRRLSCEPGLHCGWP*VGAACA Trigger: AGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTG...GAGGCCAGGCTCACAACTCAACCTCCTGGGCTGGGCTCCAGGAGGAGGTGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | TGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTCCTCGCGTTGCACTCCTaGACCAGCTCCTTTAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: CPRDTWRPVTAGTASPALLALHS*TSSFRA Trigger: CGCTCTAAAGGAGCTGGTGCAGGAGTGCAACGCGAG...GAGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGACGGGCGGTGCCAGGTaGTCCAGCCAAGTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVTGGAR*SSQVRL Trigger: CAGCCTCACTTGGCTGGACCACCTGGCACCGCCCGT...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | CCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGACTTGCGTGTCCAGCCTaGGTTCCACCAGACCACCGT | + |
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Preference number: 4 (lower is better) Translates to: PEILMGPRHHLLLEPSPGLACPA*VPPDHR Trigger: ACGGTGGTCTGGTGGAACCCAGGCTGGACACGCAAG...TCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGGCAACTCGCGCGCGCTaGCCACGTCGCTGTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVATRAR*PRRCTP Trigger: AGGAGTACAGCGACGTGGCCAGCGCGCGCGAGTTGC...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGCGGTTCCACCAGAGTTaGGGGCTGGGCACCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVRFHQS*GLGTRT Trigger: TGTCCTGGTGCCCAGCCCCCAACTCTGGTGGAACCG...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGTGCTCTTGCGCAGCCTaGCCAGTCTCCAGAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVCSCAA*PVSRRP Trigger: GGGCCTTCTGGAGACTGGCCAGGCTGCGCAAGAGCA...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCTGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGGTACACGGCCTTGCTaGACAGCTTCAGTTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLCPRDTWRPVTAGTASPGTRPC*TASVWL Trigger: CAGCCAAACTGAAGCTGTCCAGCAAGGCCGTGTACC...GGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR CCA 90 bp | TGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTCTGTCCTCCTGGGGGCTaGATGGTCTCAAGGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: CPRDTWRPVTAGTASPALCPPGG*MVSRLK Trigger: TTTCAGCCTTGAGACCATCCAGCCCCCAGGAGGACA...GAGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGTGGCCAGGACGCCACTaGCGCGCACGTCGGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: TLLLGGQSSRLRQPLCPRWPGRH*RARRGC Trigger: ACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGCCA...CCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCTGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGGTCCTGGTCTTCACTaGCAGGATGTCTGTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PLCPRDTWRPVTAGTASPGPGLH*QDVCLL Trigger: GAGAAGACAGACATCCTGGCAGTGAAGACCAGGACC...GGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGCCAGCTGCCAGCCCTaGCGGGTCTCATTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLLLGGQSSRLRQPLCPRASCQP*RVSFLH Trigger: GTGGAGGAATGAGACCCGGCAGGGCTGGCAGCTGGC...CCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS-3UTR GCA 90 bp | AAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGTCAGCGGGAAGATCTTaGCCTCAAAATGGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAALRHTEATRTRVAPAGSAGRS*PQNGSS Trigger: AGAAGATCCATTTTGAGGGCAAGATCTTCCCGCTGA...CCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTGCTCCTCTGGAGCAATaGGAAAGAGATCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: LPTGHLETSDSRNSQPRPAPLEQ*ERDPHT Trigger: TGTGTGTGGATCTCTTTCCCATTGCTCCAGAGGAGC...AGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACAGGCTCTCCTGCTaGCACACAGCTACTGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLLGGQSSRLRQPLCPRDRLSC*HTATGR Trigger: TCGCCCAGTAGCTGTGTGCCAGCAGGAGAGCCTGTC...CCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCAGACTGTGAGCAGAGGCAGCCAGAGCATATTTACAGGACTGACACCCGGCGATATGGGTATCTaGGCCTCCTGGGGACGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQTVSRGSQSIFTGLTPGDMGI*ASWGRR Trigger: CCGACGTCCCCAGGAGGCCCAGATACCCATATCGCC...GGGTGTCAGTCCTGTAAATATGCTCTGGCTGCCTCTGCTCACAGTCTGAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGTCTCACTGGTGCTCTTaGCCTCGGGCAGTTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVSHWCS*PRAVLK Trigger: TTTCAAAACTGCCCGAGGTCAAGAGCACCAGTGAGA...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCAGACTGTGAGCAGAGGCAGCCAGAGCATATTTACAGGACTGACACCCCAGCCAGCGGGCCTGTaGGATCAGCGGGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAQTVSRGSQSIFTGLTPQPAGL*DQREDL Trigger: AAGATCTTCCCGCTGATCTCACAGGCCCGCTGGCTG...GGGTGTCAGTCCTGTAAATATGCTCTGGCTGCCTCTGCTCACAGTCTGAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCAGACTGTGAGCAGAGGCAGCCAGAGCATATTTACAGGACTGACACCCCGGCTACCGGGAGCTTaGAGCTCCTCTGGAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PAQTVSRGSQSIFTGLTPRLPGA*SSSGAM Trigger: CATTGCTCCAGAGGAGCTGCAAGCTCCCGGTAGCCG...GGGTGTCAGTCCTGTAAATATGCTCTGGCTGCCTCTGCTCACAGTCTGAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGCTGTCTTCTCCAAGGTaGGTTCATCTGGCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLLGGQSSRLRQPLCPRLSSPR*VHLAAG Trigger: CCCTGCAGCCAGATGAACTCACCTTGGAGAAGACAG...CCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| 3UTR CAA 72 bp | TCTGACACTTTGCTACTTGGAGGACAAAGTAGCAGGTaGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDTLLLGGQSSR*RQPLCPRDTWR Trigger: TCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGTGTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGATACACCTGCATCTTaGGCCAGGCTGACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLLLGGQSSRLRQPLCPRDTPAS*ARLTSL Trigger: CAGAGAAGTCAGCCTGGCGCAAGATGCAGGTGTATC...CCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | GAGCGATTCTCTCCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGGTAGCTCAGCCATGTTaGCATGGACAAAAACGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERFSPEILMGPRHHLLLEVAQPC*HGQKRQ Trigger: TTGCCGTTTTTGTCCATGCCAACATGGCTGAGCTAC...CTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGGAGAGAATCGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCAGACTGTGAGCAGAGGCAGCCAGAGCATATTTACAGGACTGACACCCGAAGGTACACGGCCTTaGTGGACAGCTTCAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQTVSRGSQSIFTGLTPEGTRP*WTASVW Trigger: CCAAACTGAAGCTGTCCAGCAAGGCCGTGTACCTTC...GGGTGTCAGTCCTGTAAATATGCTCTGGCTGCCTCTGCTCACAGTCTGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCACTTTAATATTCAAGCCTGCTTGGATCTGACACTTTGCTACTTGGAGCTCAGCAGCAGCTGGTaGCTGGCGCGCTGCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSHFNIQACLDLTLCYLELSSSW*LARCPC Trigger: GCACGGGCAGCGCGCCAGGCACCAGCTGCTGCTGAG...CTCCAAGTAGCAAAGTGTCAGATCCAAGCAGGCTTGAATATTAAAGTGACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGCAAAATGGATCTTCTTaGTTAGGTGAATTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVQNGSS*LGELVP Trigger: AGGAACTAATTCACCTAAGCAAGAAGATCCATTTTG...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCACTTTAATATTCAAGCCTGCTTGGATCTGACACTTTGCTACTTGGAGAGGTCAGAACCCTGGTaGCAGTGCTGCGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSHFNIQACLDLTLCYLERSEPW*QCCAPS Trigger: GCTTGGGGCGCAGCACTGCCACCAGGGTTCTGACCT...CTCCAAGTAGCAAAGTGTCAGATCCAAGCAGGCTTGAATATTAAAGTGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCACTTTAATATTCAAGCCTGCTTGGATCTGACACTTTGCTACTTGGAGTGGACAGCTTCAGTTTaGCTGGCGGTGCGGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSHFNIQACLDLTLCYLEWTASV*LAVRRA Trigger: TGCCCGCCGCACCGCCAGCCAAACTGAAGCTGTCCA...CTCCAAGTAGCAAAGTGTCAGATCCAAGCAGGCTTGAATATTAAAGTGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTCTTGGCAACTAGGAAAACTCACAGAGTCACTTTAATATTCAAGCCTGCTGTTTCCCTTCCCGGATaGCTCCAGCACCTGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AFLATRKTHRVTLIFKPAVSLPG*LQHLSP Trigger: CGGGCTCAGGTGCTGGAGCCATCCGGGAAGGGAAAC...AGCAGGCTTGAATATTAAAGTGACTCTGTGAGTTTTCCTAGTTGCCAAGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCACTTTAATATTCAAGCCTGCTTGGATCTGACACTTTGCTACTTGGAGCCTGGAGCTTCAGGCTaGGGTCTCGAACCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSHFNIQACLDLTLCYLEPGASG*GLEPVA Trigger: AGCTACAGGTTCGAGACCTCAGCCTGAAGCTCCAGG...CTCCAAGTAGCAAAGTGTCAGATCCAAGCAGGCTTGAATATTAAAGTGACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR TCA 90 bp | AACAACAAAACAGGGAAGATGTATGTTTGTAGATGGTTTTTCCAGGGTAGTGATGCCCGTGCAGCAGCCTaGGCAGGAACACATGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNKTGKMYVCRWFFQGSDARAAA*AGTHGL Trigger: CAGGCCATGTGTTCCTGCTCAGGCTGCTGCACGGGC...ATCACTACCCTGGAAAAACCATCTACAAACATACATCTTCCCTGTTTTGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTGGCAACTAGGAAAACTCACAGAGTCACTTTAATATTCAAGCCTGCTACGTCGGGGATGTCCTaGCACAGCGAGAAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLATRKTHRVTLIFKPATSGMS*HSEKVE Trigger: CTCCACCTTCTCGCTGTGGCAGGACATCCCCGACGT...AGCAGGCTTGAATATTAAAGTGACTCTGTGAGTTTTCCTAGTTGCCAAGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTCTTGGCAACTAGGAAAACTCACAGAGTCACTTTAATATTCAAGCCTGCTCTGAGCAGGAACACATaGCCTGGGATGCCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLATRKTHRVTLIFKPALSRNT*PGMPWS Trigger: GCTCCAGGGCATCCCAGGCCATGTGTTCCTGCTCAG...AGCAGGCTTGAATATTAAAGTGACTCTGTGAGTTTTCCTAGTTGCCAAGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR GCA 90 bp | AACAACAAAACAGGGAAGATGTATGTTTGTAGATGGTTTTTCCAGGGTAGTGATCTAGGCGAGCCAGGATaGCGGGGAACTTGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNKTGKMYVCRWFFQGSDLGEPG*RGTWGS Trigger: AGAACCCCAAGTTCCCCGGCATCCTGGCTCGCCTAG...ATCACTACCCTGGAAAAACCATCTACAAACATACATCTTCCCTGTTTTGTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | AACAACAAAACAGGGAAGATGTATGTTTGTAGATGGTTTTTCCAGGGTAGTGATTGGCCTGGGATGCCCTaGAGCTTCAGGCTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNKTGKMYVCRWFFQGSDWPGMP*SFRLRS Trigger: AGACCTCAGCCTGAAGCTCCAGGGCATCCCAGGCCA...ATCACTACCCTGGAAAAACCATCTACAAACATACATCTTCCCTGTTTTGTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | AACAACAAAACAGGGAAGATGTATGTTTGTAGATGGTTTTTCCAGGGTAGTGATCCCCCAGCTTGCTGCTaGCGTTGGAGACCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNKTGKMYVCRWFFQGSDPPACC*RWRPSC Trigger: ACAAGAGGGTCTCCAACGCCAGCAGCAAGCTGGGGG...ATCACTACCCTGGAAAAACCATCTACAAACATACATCTTCCCTGTTTTGTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTCTTGGCAACTAGGAAAACTCACAGAGTCACTTTAATATTCAAGCCTGCTAGCTTGCAGCTCCTCTaGAGCAATGGGAAAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AFLATRKTHRVTLIFKPASLQLL*SNGKEI Trigger: GATCTCTTTCCCATTGCTCCAGAGGAGCTGCAAGCT...AGCAGGCTTGAATATTAAAGTGACTCTGTGAGTTTTCCTAGTTGCCAAGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS GCA 90 bp | TCCGCGCCCTCCGCTCCGTCCCCGGGGCCCTCCTCCTCACGCTGCTaGCGCCGCAACTCGCGCGCGCTGGCCACGTCGCTGTACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPSAPSPGPSSSRC*RRNSRALATSLYSW Trigger: CCAGGAGTACAGCGACGTGGCCAGCGCGCGCGAGTTGCGGCGGCAGCAGCGTGAGGAGGAGGGCCCCGGGGACGGAGCGGAGGGCGCGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 90 bp | TCCTCCGCGCCCTCCGCTCCGTCCCCGGGGCCCTCCTCCTCACGCTaGTGCCGCCGCAACTCGCGCGCGCTGGCCACGTCGCTGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAPSAPSPGPSSSR*CRRNSRALATSLYS Trigger: GGAGTACAGCGACGTGGCCAGCGCGCGCGAGTTGCGGCGGCAGCAGCGTGAGGAGGAGGGCCCCGGGGACGGAGCGGAGGGCGCGGAGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 90 bp | CTCAGCGTGGCCAGGACGCCACTGCCGCGCACGTCGGGGATGTCCTaGCACAGCGAGAAGGTGGAGCCCCGCGTCGAGCGTTGCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSVARTPLPRTSGMS*HSEKVEPRVERCAR Trigger: CCGCGCGCAACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGCAGGACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGCCACGCTGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS CCA 90 bp | CGCCACTGCCGCGCACGTCGGGGATGTCCTGCCACAGCGAGAAGGTaGAGCCCCGCGTCGAGCGTTGCGCGCGGAAAGAGCTGCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHCRARRGCPATARR*SPASSVARGKSCSG Trigger: CCCCGAGCAGCTCTTTCCGCGCGCAACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGCAGGACATCCCCGACGTGCGCGGCAGTGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 90 bp | GGGATGTCCTGCCACAGCGAGAAGGTGGAGCCCCGCGTCGAGCGTTaGGCGCGGAAAGAGCTGCTCGGGGAGAGGTTGGCGCGCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMSCHSEKVEPRVER*ARKELLGERLARGG Trigger: GCCACCGCGCGCCAACCTCTCCCCGAGCAGCTCTTTCCGCGCGCAACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGCAGGACATCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 90 bp | CCTGCAGCTTGCAGTCGCGCAGGCTCAGCGTGGCCAGGACGCCACTaGCGCGCACGTCGGGGATGTCCTGCCACAGCGAGAAGGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAACSRAGSAWPGRH*RARRGCPATARRWS Trigger: GCTCCACCTTCTCGCTGTGGCAGGACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGCCACGCTGAGCCTGCGCGACTGCAAGCTGCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGACGGTTCCACCAGAGTaGGGGGCTGGGCACCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGGPQTHRGHPHPSGPSWTVPPE*GAGHQD Trigger: GTCCTGGTGCCCAGCCCCCAACTCTGGTGGAACCGT...CCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 90 bp | CACAGTCGGCTCGGAGGCAGCTCCACGAAGGACAGGCTCTCCTGCTaGCACACAGCTACTGGGCGACGGGCGGTGCCAGGTGGTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSRLGGSSTKDRLSC*HTATGRRAVPGGPA Trigger: GGCTGGACCACCTGGCACCGCCCGTCGCCCAGTAGCTGTGTGCCAGCAGGAGAGCCTGTCCTTCGTGGAGCTGCCTCCGAGCCGACTGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000138096.8 ENSMUST00000141834.9 |
||
| CDS TCA 90 bp | GGATTCCCTCACGGGCAGTTTCCCTTCCCGGATGGCTCCAGCACCTaGGCCCGAGGTCAGAACCCTGGTGGCAGTGCTGCGCCCCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GFPHGQFPFPDGSST*ARGQNPGGSAAPQA Trigger: CGCTTGGGGCGCAGCACTGCCACCAGGGTTCTGACCTCGGGCTCAGGTGCTGGAGCCATCCGGGAAGGGAAACTGCCCGTGAGGGAATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS TCA 90 bp | TTGCGCAGTCGAGCGCTGAGGCTGCTGATCTCCACCACATGGGCCTaGGGCACCCATCCCTTCTCACCATCGGCCAGGCGCACGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRSRALRLLISTTWA*GTHPFSPSARRTPS Trigger: GGAGGGCGTGCGCCTGGCCGATGGTGAGAAGGGATGGGTGCCTCAGGCCCATGTGGTGGAGATCAGCAGCCTCAGCGCTCGACTGCGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS GCA 90 bp | ACACACAGTCGGCTCGGAGGCAGCTCCACGAAGGACAGGCTCTCCTaGTGGCACACAGCTACTGGGCGACGGGCGGTGCCAGGTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: THSRLGGSSTKDRLS*WHTATGRRAVPGGP Trigger: TGGACCACCTGGCACCGCCCGTCGCCCAGTAGCTGTGTGCCAGCAGGAGAGCCTGTCCTTCGTGGAGCTGCCTCCGAGCCGACTGTGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000138096.8 ENSMUST00000141834.9 |
||
| CDS CCA 90 bp | AGGCAGCTCCACGAAGGACAGGCTCTCCTGCTGGCACACAGCTACTaGGCGACGGGCGGTGCCAGGTGGTCCAGCCAAGTGAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQLHEGQALLLAHSY*ATGGARWSSQVRLE Trigger: CTCCAGCCTCACTTGGCTGGACCACCTGGCACCGCCCGTCGCCCAGTAGCTGTGTGCCAGCAGGAGAGCCTGTCCTTCGTGGAGCTGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000138096.8 ENSMUST00000141834.9 |
||
| CDS CCA 90 bp | GACAGTGAGGCCAGCTGCCAGCCCTGCCGGGTCTCATTCCTCCACTaGTGGAGGCGATATGGGTATCTGGGCCTCCTGGGGACGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSEASCQPCRVSFLH*WRRYGYLGLLGTSA Trigger: GGCCGACGTCCCCAGGAGGCCCAGATACCCATATCGCCTCCACCAGTGGAGGAATGAGACCCGGCAGGGCTGGCAGCTGGCCTCACTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
||
| CDS CCA 90 bp | GCTCAAATTTGGCCTCCTGCAGCTTGCAGTCGCGCAGGCTCAGCGTaGCCAGGACGCCACTGCCGCGCACGTCGGGGATGTCCTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AQIWPPAACSRAGSA*PGRHCRARRGCPAT Trigger: TGTGGCAGGACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGCCACGCTGAGCCTGCGCGACTGCAAGCTGCAGGAGGCCAAATTTGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 90 bp | TGGTGCCTGGCGCGCTGCCCGTGCAGCAGCCTGAGCAGGAACACATaGCCTGGGATGCCCTGGAGCTTCAGGCTGAGGTCTCGAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WCLARCPCSSLSRNT*PGMPWSFRLRSRTC Trigger: ACAGGTTCGAGACCTCAGCCTGAAGCTCCAGGGCATCCCAGGCCATGTGTTCCTGCTCAGGCTGCTGCACGGGCAGCGCGCCAGGCACCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS TCA 90 bp | GCTGCGCCCCAAGCGCAGAGAGGAATGCAGCCTAGTCATCAGCTCTaGGGCCGAGAAACGCCTTCGCTCCGGTGCCTCAAGGCCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAPQAQRGMQPSHQL*GRETPSLRCLKAPS Trigger: AGAGGGGGCCTTGAGGCACCGGAGCGAAGGCGTTTCTCGGCCTCAGAGCTGATGACTAGGCTGCATTCCTCTCTGCGCTTGGGGCGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS GCA 90 bp | CACCGTTGCTTCTCACTTTCGGTCCGTGCTCTCAGCAGCAGCTGGTaGCTGGCGCGCTGCCCGTGCAGCAGCCTGAGCAGGAACACATGG | + |
|
Preference number: 5 (lower is better) Translates to: HRCFSLSVRALSSSW*LARCPCSSLSRNTW Trigger: CCATGTGTTCCTGCTCAGGCTGCTGCACGGGCAGCGCGCCAGGCACCAGCTGCTGCTGAGAGCACGGACCGAAAGTGAGAAGCAACGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 90 bp | AGTGAGGCCAGCTGCCAGCCCTGCCGGGTCTCATTCCTCCACTGGTaGAGGCGATATGGGTATCTGGGCCTCCTGGGGACGTCGGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SEASCQPCRVSFLHW*RRYGYLGLLGTSAI Trigger: TATGGCCGACGTCCCCAGGAGGCCCAGATACCCATATCGCCTCCACCAGTGGAGGAATGAGACCCGGCAGGGCTGGCAGCTGGCCTCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGACACCTGGAGACCAGTGTTGGCCTCCTGCAGCTaGCAGTCGCGCAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSRLRQPLCPRDTWRPVLASCS*QSRRLS Trigger: GCTGAGCCTGCGCGACTGCAAGCTGCAGGAGGCCAA...CACTGGTCTCCAGGTGTCCCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCACGGGACACCTGGAGACCAGTGACAGCAGGAACAGCCAGCCCCGCCCTCAGAGCGCTGAAGGCCTaGGTGGCCATGTCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CPRDTWRPVTAGTASPALRALKA*VAMSSS Trigger: AGATGAGGACATGGCCACCAAGGCCTTCAGCGCTCT...GAGGGCGGGGCTGGCTGTTCCTGCTGTCACTGGTCTCCAGGTGTCCCGTGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS TCA 90 bp | TTCTCTGAGCCACTGTGGCTGGCCCTGCGTTGGGGCTGCATGTGCTaGGAACTCCACGGTTCCACCAGAGTTGGGGGCTGGGCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSEPLWLALRWGCMC*ELHGSTRVGGWAPG Trigger: TCCTGGTGCCCAGCCCCCAACTCTGGTGGAACCGTGGAGTTCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTGGCTCAGAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
||
| CDS CCA 90 bp | CCAGGGACCAGCGGCTACCGGGAGCTTGCAGCTCCTCTGGAGCAATaGGAAAGAGATCCACACACAGTCGGCTCGGAGGCAGCTCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: PGTSGYRELAAPLEQ*ERDPHTVGSEAAPR Trigger: TCGTGGAGCTGCCTCCGAGCCGACTGTGTGTGGATCTCTTTCCCATTGCTCCAGAGGAGCTGCAAGCTCCCGGTAGCCGCTGGTCCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000141834.9 |
||
| CDS CCA 90 bp | CTGCCAGCCCTGCCGGGTCTCATTCCTCCACTGGTGGAGGCGATATaGGTATCTGGGCCTCCTGGGGACGTCGGCCATAACAGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPALPGLIPPLVEAI*VSGPPGDVGHNSPW Trigger: CCAAGGACTGTTATGGCCGACGTCCCCAGGAGGCCCAGATACCCATATCGCCTCCACCAGTGGAGGAATGAGACCCGGCAGGGCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
||
| CDS CCA 90 bp | ATCCACCGTTGCTTCTCACTTTCGGTCCGTGCTCTCAGCAGCAGCTaGTGCCTGGCGCGCTGCCCGTGCAGCAGCCTGAGCAGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: IHRCFSLSVRALSSS*CLARCPCSSLSRNT Trigger: TGTGTTCCTGCTCAGGCTGCTGCACGGGCAGCGCGCCAGGCACCAGCTGCTGCTGAGAGCACGGACCGAAAGTGAGAAGCAACGGTGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | AGACACACAGAGGCCACCCGCACCCGAGTGGCCCCAGCTGGGCCCCAGCAGAGCTGTAGCTCAGCCATGTaGGCATGGACAAAAACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHTEATRTRVAPAGPQQSCSSAM*AWTKTA Trigger: TGCCGTTTTTGTCCATGCCAACATGGCTGAGCTACA...GCTCTGCTGGGGCCCAGCTGGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS GCA 90 bp | GCATCTTGCGCCAGGCTGACTTCTCTGAGCCACTGTGGCTGGCCCTaGGTTGGGGCTGCATGTGCTGAGAACTCCACGGTTCCACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASCARLTSLSHCGWP*VGAACAENSTVPPE Trigger: CTCTGGTGGAACCGTGGAGTTCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTGGCTCAGAGAAGTCAGCCTGGCGCAAGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 |
||
| CDS GCA 90 bp | GTCAGAACCCTGGTGGCAGTGCTGCGCCCCAAGCGCAGAGAGGAATaGAGCCTAGTCATCAGCTCTGAGGCCGAGAAACGCCTTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRTLVAVLRPKRREE*SLVISSEAEKRLRS Trigger: GGAGCGAAGGCGTTTCTCGGCCTCAGAGCTGATGACTAGGCTGCATTCCTCTCTGCGCTTGGGGCGCAGCACTGCCACCAGGGTTCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS GCA 90 bp | CGGGCAGTTTCCAGGCTGACTTCTCTGAGCCACTGTGGCTGGCCCTaGGTTGGGGCTGCATGTGCTGAGAACTCCACGGTTCCACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAVSRLTSLSHCGWP*VGAACAENSTVPPE Trigger: CTCTGGTGGAACCGTGGAGTTCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTGGCTCAGAGAAGTCAGCCTGGAAACTGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147903.3 |
||
| CDS-3UTR CAA 90 bp | GACTGTGAAGGCGGCCCTCAGACACACAGAGGCCACCCGCACCCGAGTGGCCCCGTAATCAGCTCAAATTaGGCCTCCTGCAGCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DCEGGPQTHRGHPHPSGPVISSN*ASCSLQ Trigger: CTGCAAGCTGCAGGAGGCCAAATTTGAGCTGATTAC...GGGGCCACTCGGGTGCGGGTGGCCTCTGTGTGTCTGAGGGCCGCCTTCACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS TCA 90 bp | CTCGGCGGAATGCGGGGCAATGGTGTAGAACCACATCGCACACGCTaGAGCGCAGCACATCGGCCTCTAGACGCTGCTCCAGGTCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGGMRGNGVEPHRTR*SAAHRPLDAAPGRE Trigger: TTCACGACCTGGAGCAGCGTCTAGAGGCCGATGTGCTGCGCTTCAGCGTGTGCGATGTGGTTCTACACCATTGCCCCGCATTCCGCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 90 bp | TGCCCGTGCAGCAGCCTGAGCAGGAACACATGGCCTGGGATGCCCTaGAGCTTCAGGCTGAGGTCTCGAACCTGTAGCTCAGCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPCSSLSRNTWPGMP*SFRLRSRTCSSAML Trigger: CAACATGGCTGAGCTACAGGTTCGAGACCTCAGCCTGAAGCTCCAGGGCATCCCAGGCCATGTGTTCCTGCTCAGGCTGCTGCACGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | CCTGAAATCCTGATGGGGCCCCGGCATCACCTCCTCCTGGAGCCCAGCCCAGGACTCTCACTGGTGCTCTaGACCTCGGGCAGTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PEILMGPRHHLLLEPSPGLSLVL*TSGSFE Trigger: TTCAAAACTGCCCGAGGTCAAGAGCACCAGTGAGAG...TCCTGGGCTGGGCTCCAGGAGGAGGTGATGCCGGGGCCCCATCAGGATTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCAGACTGTGAGCAGAGGCAGCCAGAGCATATTTACAGGACTGACACCCCTGGACAGCTTCAGTTaGGCTGGCGGTGCGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAQTVSRGSQSIFTGLTPLDSFS*AGGAAG Trigger: GCCCGCCGCACCGCCAGCCAAACTGAAGCTGTCCAG...GGGTGTCAGTCCTGTAAATATGCTCTGGCTGCCTCTGCTCACAGTCTGAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | ACTTTGCTACTTGGAGGACAAAGTAGCAGGTTGAGGCAGCCCCTCTGCCCACGGGCGGCTACCGGGAGCTaGCAGCTCCTCTGGAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLLLGGQSSRLRQPLCPRAATGS*QLLWSN Trigger: ATTGCTCCAGAGGAGCTGCAAGCTCCCGGTAGCCGC...CCGTGGGCAGAGGGGCTGCCTCAACCTGCTACTTTGTCCTCCAAGTAGCAAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCAGACTGTGAGCAGAGGCAGCCAGAGCATATTTACAGGACTGACACCCGTGGCTGGCCCTGCGTaGGGGCTGCATGTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAQTVSRGSQSIFTGLTPVAGPA*GLHVLR Trigger: TCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCAC...GGGTGTCAGTCCTGTAAATATGCTCTGGCTGCCTCTGCTCACAGTCTGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCACTTTAATATTCAAGCCTGCTTGGATCTGACACTTTGCTACTTGGAGGCCCCGCGTCGAGCGTaGCGCGCGGAAAGAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSHFNIQACLDLTLCYLEAPRRA*RAERAA Trigger: AGCAGCTCTTTCCGCGCGCAACGCTCGACGCGGGGC...CTCCAAGTAGCAAAGTGTCAGATCCAAGCAGGCTTGAATATTAAAGTGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS GCA 72 bp | TCCGCTCCGTCCCCGGGGCCCTCCTCCTCACGCTGCTaGCGCCGCAACTCGCGCGCGCTGGCCACGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAPSPGPSSSRC*RRNSRALATSL Trigger: CAGCGACGTGGCCAGCGCGCGCGAGTTGCGGCGGCAGCAGCGTGAGGAGGAGGGCCCCGGGGACGGAGCGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 72 bp | TGGAGCCCCGCGTCGAGCGTTGCGCGCGGAAAGAGCTaGTCGGGGAGAGGTTGGCGCGCGGTGGCCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WSPASSVARGKS*SGRGWRAVARA Trigger: GGCCCGGGCCACCGCGCGCCAACCTCTCCCCGAGCAGCTCTTTCCGCGCGCAACGCTCGACGCGGGGCTCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS CCA 72 bp | AGCGTTGCGCGCGGAAAGAGCTGCTCGGGGAGAGGTTaGCGCGCGGTGGCCCGGGCCCCTCCTCCGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVARGKSCSGRG*RAVARAPPPRP Trigger: AGGGCGCGGAGGAGGGGCCCGGGCCACCGCGCGCCAACCTCTCCCCGAGCAGCTCTTTCCGCGCGCAACGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 72 bp | GCCAGGACGCCACTGCCGCGCACGTCGGGGATGTCCTaGCACAGCGAGAAGGTGGAGCCCCGCGTCGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: ARTPLPRTSGMS*HSEKVEPRVER Trigger: ACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGCAGGACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 72 bp | TGCAGTCGCGCAGGCTCAGCGTGGCCAGGACGCCACTaGCGCGCACGTCGGGGATGTCCTGCCACAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSRAGSAWPGRH*RARRGCPATAR Trigger: TCTCGCTGTGGCAGGACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGCCACGCTGAGCCTGCGCGACTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS CCA 72 bp | CGCGCACGTCGGGGATGTCCTGCCACAGCGAGAAGGTaGAGCCCCGCGTCGAGCGTTGCGCGCGGAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RARRGCPATARR*SPASSVARGKS Trigger: GCTCTTTCCGCGCGCAACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGCAGGACATCCCCGACGTGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS CCA 72 bp | TGGCCTCCTGCAGCTTGCAGTCGCGCAGGCTCAGCGTaGCCAGGACGCCACTGCCGCGCACGTCGGGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: WPPAACSRAGSA*PGRHCRARRGC Trigger: ACATCCCCGACGTGCGCGGCAGTGGCGTCCTGGCCACGCTGAGCCTGCGCGACTGCAAGCTGCAGGAGGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS GCA 72 bp | TGCCACAGCGAGAAGGTGGAGCCCCGCGTCGAGCGTTaGGCGCGGAAAGAGCTGCTCGGGGAGAGGTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CHSEKVEPRVER*ARKELLGERLA Trigger: CGCCAACCTCTCCCCGAGCAGCTCTTTCCGCGCGCAACGCTCGACGCGGGGCTCCACCTTCTCGCTGTGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS GCA 72 bp | AGCTCCTGGGGCCCGGGCTCTAGAGCACACAGAGCCTaGTCTTGCGCAGCCTGGCCAGTCTCCAGAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWGPGSRAHRA*SCAAWPVSRRP Trigger: GGGCCTTCTGGAGACTGGCCAGGCTGCGCAAGAGCAGGCTCTGTGTGCTCTAGAGCCCGGGCCCCAGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS GCA 72 bp | GCTCTCAGCAGCAGCTGGTGCCTGGCGCGCTGCCCGTaGAGCAGCCTGAGCAGGAACACATGGCCTGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ALSSSWCLARCP*SSLSRNTWPGM Trigger: CATCCCAGGCCATGTGTTCCTGCTCAGGCTGCTGCACGGGCAGCGCGCCAGGCACCAGCTGCTGCTGAGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS TCA 72 bp | CACGGGCAGTTTCCCTTCCCGGATGGCTCCAGCACCTaGGCCCGAGGTCAGAACCCTGGTGGCAGTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HGQFPFPDGSST*ARGQNPGGSAA Trigger: CGCAGCACTGCCACCAGGGTTCTGACCTCGGGCTCAGGTGCTGGAGCCATCCGGGAAGGGAAACTGCCCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS TCA 72 bp | CGAGCGCTGAGGCTGCTGATCTCCACCACATGGGCCTaGGGCACCCATCCCTTCTCACCATCGGCCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RALRLLISTTWA*GTHPFSPSARR Trigger: GCGCCTGGCCGATGGTGAGAAGGGATGGGTGCCTCAGGCCCATGTGGTGGAGATCAGCAGCCTCAGCGCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS CCA 72 bp | CACGAAGGACAGGCTCTCCTGCTGGCACACAGCTACTaGGCGACGGGCGGTGCCAGGTGGTCCAGCCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HEGQALLLAHSY*ATGGARWSSQV Trigger: CACTTGGCTGGACCACCTGGCACCGCCCGTCGCCCAGTAGCTGTGTGCCAGCAGGAGAGCCTGTCCTTCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000138096.8 ENSMUST00000141834.9 |
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| CDS CCA 72 bp | GCCAGCTGCCAGCCCTGCCGGGTCTCATTCCTCCACTaGTGGAGGCGATATGGGTATCTGGGCCTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASCQPCRVSFLH*WRRYGYLGLLG Trigger: CCCCAGGAGGCCCAGATACCCATATCGCCTCCACCAGTGGAGGAATGAGACCCGGCAGGGCTGGCAGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
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| CDS CCA 72 bp | AGAAACGCCTTCGCTCCGGTGCCTCAAGGCCCCCTCTaGCGTTCCCAGAAAGCTCCTGGGGCCCGGGCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RNAFAPVPQGPL*RSQKAPGARAL Trigger: TAGAGCCCGGGCCCCAGGAGCTTTCTGGGAACGCCAGAGGGGGCCTTGAGGCACCGGAGCGAAGGCGTTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS CCA 72 bp | CCTCCTCACGCTGCTGCCGCCGCAACTCGCGCGCGCTaGCCACGTCGCTGTACTCCTGGTAGAGGACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PPHAAAAATRAR*PRRCTPGRGQN Trigger: ATTCTGTCCTCTACCAGGAGTACAGCGACGTGGCCAGCGCGCGCGAGTTGCGGCGGCAGCAGCGTGAGGAGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000147903.3 |
||
| CDS TCA 72 bp | CCACTGTGGCTGGCCCTGCGTTGGGGCTGCATGTGCTaGGAACTCCACGGTTCCACCAGAGTTGGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLWLALRWGCMC*ELHGSTRVGGW Trigger: CCAGCCCCCAACTCTGGTGGAACCGTGGAGTTCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
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| CDS CCA 72 bp | AGCTGCCAGCCCTGCCGGGTCTCATTCCTCCACTGGTaGAGGCGATATGGGTATCTGGGCCTCCTGGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SCQPCRVSFLHW*RRYGYLGLLGT Trigger: CGTCCCCAGGAGGCCCAGATACCCATATCGCCTCCACCAGTGGAGGAATGAGACCCGGCAGGGCTGGCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
||
| CDS CCA 72 bp | GGCTCTAGAGCACACAGAGCCTGCTCTTGCGCAGCCTaGCCAGTCTCCAGAAGGCCCGTAGGGGTCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSRAHRACSCAA*PVSRRPVGVSV Trigger: CACCGAGACCCCTACGGGCCTTCTGGAGACTGGCCAGGCTGCGCAAGAGCAGGCTCTGTGTGCTCTAGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS CCA 72 bp | TGGCTCCAGCACCTGAGCCCGAGGTCAGAACCCTGGTaGCAGTGCTGCGCCCCAAGCGCAGAGAGGAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLQHLSPRSEPW*QCCAPSAERNA Trigger: TGCATTCCTCTCTGCGCTTGGGGCGCAGCACTGCCACCAGGGTTCTGACCTCGGGCTCAGGTGCTGGAGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS CCA 72 bp | TTCGGGATTCCCTCACGGGCAGTTTCCCTTCCCGGATaGCTCCAGCACCTGAGCCCGAGGTCAGAACCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FGIPSRAVSLPG*LQHLSPRSEPW Trigger: CCAGGGTTCTGACCTCGGGCTCAGGTGCTGGAGCCATCCGGGAAGGGAAACTGCCCGTGAGGGAATCCCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS CCA 72 bp | CTGCCCGTGCAGCAGCCTGAGCAGGAACACATGGCCTaGGATGCCCTGGAGCTTCAGGCTGAGGTCTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPVQQPEQEHMA*DALELQAEVSN Trigger: GTTCGAGACCTCAGCCTGAAGCTCCAGGGCATCCCAGGCCATGTGTTCCTGCTCAGGCTGCTGCACGGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 72 bp | CCAGGCGCACGCCCTCCAGCCAGCCATCGCTGGTCCTaGTCTTCACTGCCAGGATGTCTGTCTTCTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGARPPASHRWS*SSLPGCLSSPR Trigger: CCTTGGAGAAGACAGACATCCTGGCAGTGAAGACCAGGACCAGCGATGGCTGGCTGGAGGGCGTGCGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 72 bp | CATCGGCCAGGCGCACGCCCTCCAGCCAGCCATCGCTaGTCCTGGTCTTCACTGCCAGGATGTCTGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HRPGARPPASHR*SWSSLPGCLSS Trigger: AGAAGACAGACATCCTGGCAGTGAAGACCAGGACCAGCGATGGCTGGCTGGAGGGCGTGCGCCTGGCCGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CAA 90 bp | CCCAGCTTGCTGCTGGCGTTGGAGACCCTCTTGTACTCTCTGAGGTaGCGCAGTCGAGCGCTGAGGCTGCTGATCTCCACCACATGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSLLLALETLLYSLR*RSRALRLLISTTWA Trigger: GGCCCATGTGGTGGAGATCAGCAGCCTCAGCGCTCGACTGCGCAACCTCAGAGAGTACAAGAGGGTCTCCAACGCCAGCAGCAAGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS TCA 72 bp | CACCAGCTCCCCGTGCCGGACCAGCCAGCGGGCCTGTaGGATCAGCGGGAAGATCTTGCCCTCAAAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HQLPVPDQPAGL*DQREDLALKMD Trigger: ATCCATTTTGAGGGCAAGATCTTCCCGCTGATCTCACAGGCCCGCTGGCTGGTCCGGCACGGGGAGCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS GCA 72 bp | CTGGTGGCAGTGCTGCGCCCCAAGCGCAGAGAGGAATaGAGCCTAGTCATCAGCTCTGAGGCCGAGAAACGC | + |
|
Preference number: 6 (lower is better) Translates to: LVAVLRPKRREE*SLVISSEAEKR Trigger: GCGTTTCTCGGCCTCAGAGCTGATGACTAGGCTGCATTCCTCTCTGCGCTTGGGGCGCAGCACTGCCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
||
| CDS CCA 72 bp | CTGCCGGGTCTCATTCCTCCACTGGTGGAGGCGATATaGGTATCTGGGCCTCCTGGGGACGTCGGCCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPGLIPPLVEAI*VSGPPGDVGHN Trigger: GTTATGGCCGACGTCCCCAGGAGGCCCAGATACCCATATCGCCTCCACCAGTGGAGGAATGAGACCCGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000147903.3 |
||
| CDS CCA 72 bp | TCTTGCGCCAGGCTGACTTCTCTGAGCCACTGTGGCTaGCCCTGCGTTGGGGCTGCATGTGCTGAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCARLTSLSHCG*PCVGAACAENS Trigger: GGAGTTCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTGGCTCAGAGAAGTCAGCCTGGCGCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 |
||
| CDS GCA 72 bp | GTCCGCTTCATGGACTGCACGCTCGCGTTGCACTCCTaGACCAGCTCCTTTAGAGCGCTGAAGGCCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VRFMDCTLALHS*TSSFRALKALV Trigger: CACCAAGGCCTTCAGCGCTCTAAAGGAGCTGGTGCAGGAGTGCAACGCGAGCGTGCAGTCCATGAAGCGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
||
| CDS CCA 72 bp | AGCGGCTACCGGGAGCTTGCAGCTCCTCTGGAGCAATaGGAAAGAGATCCACACACAGTCGGCTCGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGYRELAAPLEQ*ERDPHTVGSEA Trigger: TGCCTCCGAGCCGACTGTGTGTGGATCTCTTTCCCATTGCTCCAGAGGAGCTGCAAGCTCCCGGTAGCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 ENSMUST00000141834.9 |
||
| CDS CCA 72 bp | GCAGTTTCCAGGCTGACTTCTCTGAGCCACTGTGGCTaGCCCTGCGTTGGGGCTGCATGTGCTGAGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: AVSRLTSLSHCG*PCVGAACAENS Trigger: GGAGTTCTCAGCACATGCAGCCCCAACGCAGGGCCAGCCACAGTGGCTCAGAGAAGTCAGCCTGGAAACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147903.3 |
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| CDS CAA 72 bp | CTGCTGGCGTTGGAGACCCTCTTGTACTCTCTGAGGTaGCGCAGTCGAGCGCTGAGGCTGCTGATCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LLALETLLYSLR*RSRALRLLIST Trigger: GGTGGAGATCAGCAGCCTCAGCGCTCGACTGCGCAACCTCAGAGAGTACAAGAGGGTCTCCAACGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS TCA 72 bp | CAAGCGCAGAGAGGAATGCAGCCTAGTCATCAGCTCTaGGGCCGAGAAACGCCTTCGCTCCGGTGCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: QAQRGMQPSHQL*GRETPSLRCLK Trigger: CTTGAGGCACCGGAGCGAAGGCGTTTCTCGGCCTCAGAGCTGATGACTAGGCTGCATTCCTCTCTGCGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006618.9 ENSMUST00000135623.3 |
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| CDS TCA 72 bp | ATGCGGGGCAATGGTGTAGAACCACATCGCACACGCTaGAGCGCAGCACATCGGCCTCTAGACGCTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: MRGNGVEPHRTR*SAAHRPLDAAP Trigger: TGGAGCAGCGTCTAGAGGCCGATGTGCTGCGCTTCAGCGTGTGCGATGTGGTTCTACACCATTGCCCCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS TCA 72 bp | TCGCGTTGCACTCCTGCACCAGCTCCTTTAGAGCGCTaGAGGCCTTGGTGGCCATGTCCTCATCTTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRCTPAPAPLER*RPWWPCPHLGS Trigger: GCTCCCAAGATGAGGACATGGCCACCAAGGCCTTCAGCGCTCTAAAGGAGCTGGTGCAGGAGTGCAACGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS CCA 72 bp | AACGGTAAGATGAGGAAGGAGGTGAGAGGCAGCCGCTaGCACACAGGAGACTCCTCTAGGCGAGCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: NGKMRKEVRGSR*HTGDSSRRARM Trigger: CATCCTGGCTCGCCTAGAGGAGTCTCCTGTGTGCCAGCGGCTGCCTCTCACCTCCTTCCTCATCTTACCGTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS CAA 90 bp | CCCTGGAGCTTCAGGCTGAGGTCTCGAACCTGTAGCTCAGCCATGTaGGCATGGACAAAAACGGCAAACTTCCCGAGCTCCTTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: PWSFRLRSRTCSSAM*AWTKTANFPSSFLR Trigger: CCGGAGGAAGGAGCTCGGGAAGTTTGCCGTTTTTGTCCATGCCAACATGGCTGAGCTACAGGTTCGAGACCTCAGCCTGAAGCTCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS TCA 72 bp | GGAACACATGGCCTGGGATGCCCTGGAGCTTCAGGCTaGGGTCTCGAACCTGTAGCTCAGCCATGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GTHGLGCPGASG*GLEPVAQPCWH Trigger: ATGCCAACATGGCTGAGCTACAGGTTCGAGACCTCAGCCTGAAGCTCCAGGGCATCCCAGGCCATGTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS GCA 72 bp | TGCCGGTGGCCTCTTCGTTATGATACACCTGCATCTTaGGCCAGGCTGACTTCTCTGAGCCACTGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CRWPLRYDTPAS*ARLTSLSHCGW Trigger: CCAGCCACAGTGGCTCAGAGAAGTCAGCCTGGCGCAAGATGCAGGTGTATCATAACGAAGAGGCCACCGGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006618.9 ENSMUST00000125392.8 ENSMUST00000135623.3 |
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| CDS CCA 72 bp | CGGTCTTCCCCATCACATGTGATCTCCTTGTCCTCCTaGGGGCTGGATGGTCTCAAGGCTGAAATCCACCGT | + |
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Preference number: 6 (lower is better) Translates to: RSSPSHVISLSS*GLDGLKAEIHR Trigger: ACGGTGGATTTCAGCCTTGAGACCATCCAGCCCCCAGGAGGACAAGGAGATCACATGTGATGGGGAAGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS GCA 72 bp | GGCCTTGGTGGCCATGTCCTCATCTTGGGAGCCCGGTaGTGTCCGCTTCAAAATGTTCTCTACCAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GLGGHVLILGAR*CPLQNVLYQHL Trigger: AAGATGCTGGTAGAGAACATTTTGAAGCGGACAGCACCGGGCTCCCAAGATGAGGACATGGCCACCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS CCA 72 bp | TCTTGCTTAGGTGAATTAGTTCCTCCGTCCGCTTCATaGACTGCACGCTCGCGTTGCACTCCTGCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SCLGELVPPSAS*TARSRCTPAPA Trigger: AGCTGGTGCAGGAGTGCAACGCGAGCGTGCAGTCCATGAAGCGGACGGAGGAACTAATTCACCTAAGCAAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS CAA 72 bp | TTCAGGCTGAGGTCTCGAACCTGTAGCTCAGCCATGTaGGCATGGACAAAAACGGCAAACTTCCCGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FRLRSRTCSSAM*AWTKTANFPSS Trigger: GGAGCTCGGGAAGTTTGCCGTTTTTGTCCATGCCAACATGGCTGAGCTACAGGTTCGAGACCTCAGCCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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| CDS TCA 72 bp | GCTCCAGGTCGTGAAGGAACCTCTCACTGGTGCTCTTaGCCTCGGGCAGTTTTGAAAATAGCCACTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: APGREGTSHWCS*PRAVLKIATAC Trigger: ACAAGCAGTGGCTATTTTCAAAACTGCCCGAGGTCAAGAGCACCAGTGAGAGGTTCCTTCACGACCTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006618.9 |
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