RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF10L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040964

Ensembl transcript IDs: ENSMUST00000039204.10, ENSMUST00000069623.12, ENSMUST00000097820.9, ENSMUST00000105797.9, ENSMUST00000105798.8, ENSMUST00000105799.8, ENSMUST00000138493.8, ENSMUST00000140403.2, ENSMUST00000143614.8, ENSMUST00000147426.2, ENSMUST00000154979.2

Found 819 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACCCGTCCTCCTCACTGTGTTCCAGAGCCGAGCCATCGGCAGGTaGTGGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTGGGCCGT +
Preference number: 1 (lower is better)
Translates to: GPVLLTVFQSRAIGR*WLPHRQQGPGEVGR
Trigger: ACGGCCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCTCGGCTCTGGAACACAGTGAGGAGGACGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp CCCGTCCTCCTCACTGTGTTCCAGAGCCGAGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTGGGCCGTGGA +
Preference number: 1 (lower is better)
Translates to: PVLLTVFQSRAIGRC*LPHRQQGPGEVGRG
Trigger: TCCACGGCCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCTCGGCTCTGGAACACAGTGAGGAGGACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 90 bp GTCAGCTCCCGAGCTGTGTGGCTGTCAGGCCCAGGCACGGTTTCATaGGCCTGCCCGTCTGGCTTGTCCTCCTCGGCCTGCGGTCCCTCG +
Preference number: 1 (lower is better)
Translates to: VSSRAVWLSGPGTVS*ACPSGLSSSACGPS
Trigger: CGAGGGACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCATGAAACCGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR GCA 90 bp GCCCGGGGAGGTGGGCCGTGGAGCGTAGGCGGTATTGGAGCAGGATaGCTTTCTTGCGGGTCAGCTCCCGAGCTGTGTGGCTGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: ARGGGPWSVGGIGAG*LSCGSAPELCGCQA
Trigger: GGCCTGACAGCCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCACGGCCCACCTCCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 90 bp GCAGAGCACAGGGGCCGCCACTGGGAAGGACTTGACCGTGCGCGGTaGAGGCCGGTTCAGGGAGAAGATCTCCACCTGGCCACCAGCACC +
Preference number: 1 (lower is better)
Translates to: AEHRGRHWEGLDRAR*RPVQGEDLHLATST
Trigger: GGTGCTGGTGGCCAGGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR CCA 90 bp CCGTCTGGCTTGTCCTCCTCGGCCTGCGGTCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCAGGGGCCAGGATGCTCATGGCCACA +
Preference number: 1 (lower is better)
Translates to: PSGLSSSACGPSASS*SLRRMSGARMLMAT
Trigger: TGTGGCCATGAGCATCCTGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGGACCGCAGGCCGAGGAGGACAAGCCAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp GACAACAGGGGCCCGGGGAGGTGGGCCGTGGAGCGTAGGCGGTATTaGAGCAGGATGCCTTTCTTGCGGGTCAGCTCCCGAGCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: DNRGPGRWAVERRRY*SRMPFLRVSSRAVW
Trigger: CCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCACGGCCCACCTCCCCGGGCCCCTGTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp GTGCTGGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTGGGCCGTaGAGCGTAGGCGGTATTGGAGCAGGATGCCTTTCTTGCGGGTCA +
Preference number: 1 (lower is better)
Translates to: VLAPAQTTGARGGGP*SVGGIGAGCLSCGS
Trigger: TGACCCGCAAGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCACGGCCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp GCCGGCTCCGGACCCAGACGTCAGGGTCATCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGTGTTCCAGAGCCGAGCCATCGGCAG +
Preference number: 1 (lower is better)
Translates to: AGSGPRRQGHRPSRR*TRPPHCVPEPSHRQ
Trigger: CTGCCGATGGCTCGGCTCTGGAACACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCGATGACCCTGACGTCTGGGTCCGGAGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp CCTTGTCCACCAGAGATGATAGCCACAGAGCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCAGGG +
Preference number: 1 (lower is better)
Translates to: PCPPEMIATEQISLR*ASRAQGRLRTQTSG
Trigger: CCCTGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGTGGCTATCATCTCTGGTGGACAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp GCCACCAGCACCCTCCTGACCACCGCCAACCCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGCCGAGAAGCCCAGCAGGGGAGAGTT +
Preference number: 1 (lower is better)
Translates to: ATSTLLTTANPKVAL*KGSADRREAQQGRV
Trigger: AACTCTCCCCTGCTGGGCTTCTCGGCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGGGTTGGCGGTGGTCAGGAGGGTGCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR GCA 90 bp CCTCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGAAGGCCACAGGTCCACAGTGACCAT +
Preference number: 1 (lower is better)
Translates to: PRPLPGHSAGCQGPG*SWPQPGRPQVHSDH
Trigger: ATGGTCACTGTGGACCTGTGGCCTTCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR GCA 90 bp GACCTCTGGATGGGCAGGGTAGACAGCTATAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTGTCTGTCTCGCTGCACGGGGCCGCC +
Preference number: 1 (lower is better)
Translates to: DLWMGRVDSYRAKGT*QMRSVLSVSLHGAA
Trigger: GGCGGCCCCGTGCAGCGAGACAGACAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCTATAGCTGTCTACCCTGCCCATCCAGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp GGGATGCCCTCCAGTCGGGGTACAGGCAACAGGACAATGACACCCTaGTCAGTGCCTACCCAGAGCAGACCCTGGCAGATGAGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: GMPSSRGTGNRTMTP*SVPTQSRPWQMRRL
Trigger: CAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGTAGGCACTGACCAGGGTGTCATTGTCCTGTTGCCTGTACCCCGACTGGAGGGCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp AAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCTaGATGGGCAGGGTAGACAGCTATAGAGCCAAGGGCACCTGCCAG +
Preference number: 1 (lower is better)
Translates to: KGPSMSAVIQLPPDL*MGRVDSYRAKGTCQ
Trigger: CTGGCAGGTGCCCTTGGCTCTATAGCTGTCTACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 90 bp GAATATACTCTATGCAGAGCACAGGGGCCGCCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCCGGTTCAGGGAGAAGATCTCCACCT +
Preference number: 1 (lower is better)
Translates to: EYTLCRAQGPPLGRT*PCAVKAGSGRRSPP
Trigger: AGGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGCATAGAGTATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR CCA 90 bp CTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTaGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGT +
Preference number: 1 (lower is better)
Translates to: LCSSKASVENPGLSL*PGQVPEENPGGPKG
Trigger: ACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR TCA 90 bp GCCAGGATGCTCATGGCCACAGCCAGGAAGGCCACAGGTCCACAGTaGCCATTGAGAGACACCATGCCTTTCCCTGTGATCTTGGGGATG +
Preference number: 1 (lower is better)
Translates to: ARMLMATARKATGPQ*PLRDTMPFPVILGM
Trigger: CATCCCCAAGATCACAGGGAAAGGCATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGCCTTCCTGGCTGTGGCCATGAGCATCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 90 bp TATATTTATAGTCACACGCTCAGACACTCACACATACACTCCTCCTaGAGGGGCCCGCCCACCTCGGAGCCTCACTCAGCCCCAACAAAA +
Preference number: 1 (lower is better)
Translates to: YIYSHTLRHSHIHSS*RGPPTSEPHSAPTK
Trigger: TTTTGTTGGGGCTGAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGTGTGACTATAAATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp CTGCACGGGGCCGCCCGCCCACTCAGGCCACCTGGAGCACCGCCGAAATGGCGGCCAGCATGTCCGCAGTaGTCCAGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: LHGAARPLRPPGAPPKWRPACPQ*SSCPLT
Trigger: GGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGG...CCGCCATTTCGGCGGTGCTCCAGGTGGCCTGAGTGGGCGGGCGGCCCCGTGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCCAGCATGTCCGCAGTaGTCCAGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAPACPQ*SSCPLT
Trigger: GGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR CAA 90 bp AGGTGGGCCGTGGAGCGTAGGCGGTATTGGAGCAGGATGCCTTTCTaGCGGGTCAGCTCCCGAGCTGTGTGGCTGTCAGGCCCAGGCACG +
Preference number: 2 (lower is better)
Translates to: RWAVERRRYWSRMPF*RVSSRAVWLSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCACGGCCCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCGATCCAGCTGCCCCCTaGCCTCTGGATGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLDPAAP*PLDGQG
Trigger: ACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATC...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp TCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCAGGATGCTCATGGCCGCCTGGGCAGGTCCCTaGGGAAAATCCAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: SASSWSLRRMSGARMLMAAWAGP*GKSRWA
Trigger: GGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGC...GGCCATGAGCATCCTGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCGATCCAGCTGCCCCCTaGCCTCTGGATGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPDPAAP*PLDGQG
Trigger: ACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATC...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGATCCAGCTGCCCCCTaGCCTCTGGATGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMDPAAP*PLDGQG
Trigger: ACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATC...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCAGCATGTCCGCAGTaGTCCAGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSPACPQ*SSCPLT
Trigger: GGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCCAGGCCTATCCCTGTaGCCTGGGCAGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPPGLSL*PGQVPE
Trigger: CTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp TCACTCCGCAGGATGTCAGGGGCCAGGATGCTCATGGCCACAGCCAGGAAGGCCACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: SLRRMSGARMLMATARKATQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...GGCCTTCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACATCCTGCGGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CAA 90 bp CCGCCCACTCAGGCCACCTGGAGCACCGCCGAAATGGCGGTAGCCTaGTCCACCAGAGATGATAGCCACAGAGCAGATCTCCTTGCGGTG +
Preference number: 2 (lower is better)
Translates to: PPTQATWSTAEMAVA*STRDDSHRADLLAV
Trigger: CACCGCAAGGAGATCTGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCTCCAGGTGGCCTGAGTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGATCCAGCTGCCCCCTaGCCTCTGGATGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGDPAAP*PLDGQG
Trigger: ACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATC...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCCAGCATGTCCGCAGTaGTCCAGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGPACPQ*SSCPLT
Trigger: GGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCAGCATGTCCGCAGTaGTCCAGCTGCCCCCTGACC +
Preference number: 2 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPACPQ*SSCPLT
Trigger: GGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCAGGCCTATCCCTGTaGCCTGGGCAGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPGLSL*PGQVPE
Trigger: CTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR GCA 90 bp CCAGACGTCAGGGTCATCGGCCATCTCGTAGATGGACCCGTCCTCCTCACTGTGTGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PDVRVIGHLVDGPVLLTVCQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...CACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCGATGACCCTGACGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp AGCACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCAAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 2 (lower is better)
Translates to: STAEMAVALSTRDDSHRASSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...TGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CAA 90 bp GGAATATACTCTATGCAGAGCACAGGGGCCGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGCCGGTTCAGGGAGAAGATCTCCACC +
Preference number: 2 (lower is better)
Translates to: GIYSMQSTGAATGKD*TVRGEGRFREKIST
Trigger: GGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGCATAGAGTATATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR-3UTR TCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTAGGGCACCTGCCAGATaGGAAGTGTGCTGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPRAPAR*EVCCLS
Trigger: AGACAGACAGCACACTTCTCATCTGGCAGGTGCCCT...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp ACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCAGATCCAGGCCTATCCCTGTaGCCTGGGCAGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: TAEMAVALSTRDDSHRADPGLSL*PGQVPE
Trigger: CTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGG...ATCTGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGATCCAGCTGCCCCCTaGCCTCTGGATGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVDPAAP*PLDGQG
Trigger: ACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATC...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCGCCTGGGCAGGTCCCTaGGGAAAATCCAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAAWAGP*GKSRWA
Trigger: GGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGC...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp AGCACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCACCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: STAEMAVALSTRDDSHRAPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...TGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR GCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTTGTCCTCCTCGGCCTaGGGTCCCTCGGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQALSSSA*GPSASS
Trigger: GGAAGAGGCCGAGGGACCGCAGGCCGAGGAGGACAA...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCCAGGCCTATCCCTGTaGCCTGGGCAGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAPGLSL*PGQVPE
Trigger: CTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR-3UTR CCA 90 bp AGCACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCACGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 2 (lower is better)
Translates to: STAEMAVALSTRDDSHRARPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...TGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR TCA 90 bp TATTGGAGCAGGATGCCTTTCTTGCGGGTCAGCTCCCGAGCTGTGTGGCTGTCAGCCACAGGTCCACAGTaGCCATTGAGAGACACCATG +
Preference number: 2 (lower is better)
Translates to: YWSRMPFLRVSSRAVWLSATGPQ*PLRDTM
Trigger: CATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGC...TGACAGCCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR GCA 72 bp CTCCTCACTGTGTTCCAGAGCCGAGCCATCGGCAGGTaGTGGCTCCCGCACAGACAACAGGGGCCCGGGGAG +
Preference number: 3 (lower is better)
Translates to: LLTVFQSRAIGR*WLPHRQQGPGE
Trigger: CTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCTCGGCTCTGGAACACAGTGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 72 bp CTCACTGTGTTCCAGAGCCGAGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LTVFQSRAIGRC*LPHRQQGPGEV
Trigger: CACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCTCGGCTCTGGAACACAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR-3UTR CAA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 3 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 72 bp AGGGGCCGCCACTGGGAAGGACTTGACCGTGCGCGGTaGAGGCCGGTTCAGGGAGAAGATCTCCACCTGGCC +
Preference number: 3 (lower is better)
Translates to: RGRHWEGLDRAR*RPVQGEDLHLA
Trigger: GGCCAGGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR CCA 72 bp CCCGCACAGACAACAGGGGCCCGGGGAGGTGGGCCGTaGAGCGTAGGCGGTATTGGAGCAGGATGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: PAQTTGARGGGP*SVGGIGAGCLS
Trigger: AGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCACGGCCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 72 bp ATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTaGTCCAGCTGCCCCCTGACCTCTGGATGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: IQVGQRVPACPQ*SSCPLTSGWAG
Trigger: CCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR GCA 72 bp GGTGGGCCGTGGAGCGTAGGCGGTATTGGAGCAGGATaGCTTTCTTGCGGGTCAGCTCCCGAGCTGTGTGGC +
Preference number: 3 (lower is better)
Translates to: GGPWSVGGIGAG*LSCGSAPELCG
Trigger: GCCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCACGGCCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 72 bp CCAGAGATGATAGCCACAGAGCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGCCGGCTCCGGACCCAG +
Preference number: 3 (lower is better)
Translates to: PEMIATEQISLR*ASRAQGRLRTQ
Trigger: CTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGTGGCTATCATCTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 72 bp CTATGCAGAGCACAGGGGCCGCCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCCGGTTCAGGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: LCRAQGPPLGRT*PCAVKAGSGRR
Trigger: TCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGCATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR CCA 72 bp ACCCTCCTGACCACCGCCAACCCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGCCGAGAAGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: TLLTTANPKVAL*KGSADRREAQQ
Trigger: CTGCTGGGCTTCTCGGCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGGGTTGGCGGTGGTCAGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
3UTR CCA 72 bp GGACCCAGACGTCAGGGTCATCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGTGTTCCAGAGCCGAGC +
Preference number: 3 (lower is better)
Translates to: GPRRQGHRPSRR*TRPPHCVPEPS
Trigger: GCTCGGCTCTGGAACACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCGATGACCCTGACGTCTGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CCA 72 bp TCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTaGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: SKASVENPGLSL*PGQVPEENPGG
Trigger: CCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
3UTR CCA 72 bp AGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCTaGATGGGCAGGGTAGACAGCTATAGAGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: SMSAVIQLPPDL*MGRVDSYRAKG
Trigger: GCCCTTGGCTCTATAGCTGTCTACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR TCA 72 bp CTCATGGCCACAGCCAGGAAGGCCACAGGTCCACAGTaGCCATTGAGAGACACCATGCCTTTCCCTGTGATC +
Preference number: 3 (lower is better)
Translates to: LMATARKATGPQ*PLRDTMPFPVI
Trigger: GATCACAGGGAAAGGCATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGCCTTCCTGGCTGTGGCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR GCA 72 bp ATGGGCAGGGTAGACAGCTATAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTGTCTGTCTCGCTGCAC +
Preference number: 3 (lower is better)
Translates to: MGRVDSYRAKGT*QMRSVLSVSLH
Trigger: GTGCAGCGAGACAGACAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCTATAGCTGTCTACCCTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CGGCCTGCGGTCCCTCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCACCCTCGGCCCGCAGCTaGCCCATGCAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: RPAVPRPLPGHSAGCQGPPSARS*PMQHLP
Trigger: TGGAAGATGCTGCATGGGCCAGCTGCGGGCCGAGGG...TGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGGACCGCAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCGCTCGGCCCCGGGCTaGTGGGCGTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMRSAPG*WASGLS
Trigger: TGAGAGCCCAGACGCCCATCAGCCCGGGGCCGAGCG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp CACAGAGCAGATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HRADLLAVGITGTGPAPDPLGRT*PCAVKA
Trigger: GGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGG...GTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp CTGCACGGGGCCGCCCGCCCACTCAGGCCACCTGGAGCACCGCCGAAATGGCGGGCCTCGAAGCTTTGCTaGGTTTGCAAAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LHGAARPLRPPGAPPKWRASKLC*VCKVAA
Trigger: TGCCGCCACTTTGCAAACTCAGCAAAGCTTCGAGGC...CCGCCATTTCGGCGGTGCTCCAGGTGGCCTGAGTGGGCGGGCGGCCCCGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCAACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ISLRWASRAQGRLRTQTSTRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...TGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGARGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCACGGTTTCATGAGCCTGCCCGTCTGGCTTGTCCTCCTCGGCCTGCGGTCCCTCGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: ARFHEPARLACPPRPAVPRGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...AGGGACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCATGAAACCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCACTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: ISLRWASRAQGRLRTQTSLGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...TGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCACAGGCTGCGGGCCTaGGCTCTTGCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLHRLRA*ALAGGQ
Trigger: CTGGCCACCTGCAAGAGCCCAGGCCCGCAGCCTGTG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCACAGGCTGCGGGCCTaGGCTCTTGCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAHRLRA*ALAGGQ
Trigger: CTGGCCACCTGCAAGAGCCCAGGCCCGCAGCCTGTG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCGCTCGGCCCCGGGCTaGTGGGCGTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVRSAPG*WASGLS
Trigger: TGAGAGCCCAGACGCCCATCAGCCCGGGGCCGAGCG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp AGCCATCGGCAGGTGCTGGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTGGGTCGGCCAACCGCTTCTaGTCGTTCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SHRQVLAPAQTTGARGGGSANRF*SFSFSA
Trigger: GGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGA...CCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCAACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ISLRWASRAQGRLRTQTSTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...TGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSERGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCGTGGGTGCCTCTGTCTaGGGTGGTGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAVGASV*GGAAAG
Trigger: CCCAGCAGCTGCACCACCCCAGACAGAGGCACCCAC...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCTCCAGCCCATCCCTaGTCCCGCTCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGASPAHP*SRSWRP
Trigger: AGGCCGCCAAGAGCGGGACCAGGGATGGGCTGGAGA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCACAGGGGCCGCCACTaGGAAGGACTTGACCGTGCG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAHRGRH*EGLDRA
Trigger: CGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCCACAGGCTGCGGGCCTaGGCTCTTGCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSHRLRA*ALAGGQ
Trigger: CTGGCCACCTGCAAGAGCCCAGGCCCGCAGCCTGTG...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGASSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLSSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCCGCATCCCCATTGCTaGCCACAGTGGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLPHPHC*PQWVPL
Trigger: CAGAGGCACCCACTGTGGTCAGCAATGGGGATGCGG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPARGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPRGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQRGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CGGCCTGCGGTCCCTCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCAAGGCAGACAGTGGGATaGACTGTGACCGAGGGATCG +
Preference number: 4 (lower is better)
Translates to: RPAVPRPLPGHSAGCQGPRQTVG*TVTEGS
Trigger: CGATCCCTCGGTCACAGTGCATCCCACTGTCTGCCT...TGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGGACCGCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTCAAGCCATCCGGCATaGGGCCCAGCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQSSHPA*GPALAR
Trigger: CCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAATCAAGCCATCCGGCATaGGGCCCAGCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEESSHPA*GPALAR
Trigger: CCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGA...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTTCAAGCCATCCGGCATaGGGCCCAGCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACSSHPA*GPALAR
Trigger: CCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGA...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGALLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ATGCAGAGCACAGGGGCCGCCACTGGGAAGGACTTGACCGTGCGCGGTGAAGGCCTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: MQSTGAATGKDLTVRGEGLLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...GCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR CCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCACAGGGGCCGCCACTaGGAAGGACTTGACCGTGCG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLHRGRH*EGLDRA
Trigger: CGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCATGAGCCTGCCCGTCTaGCTTGTCCTCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAMSLPV*LVLLGL
Trigger: CAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCAT...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCGGAAGAACACCACCTaGCACTTGCGGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLRKNTT*HLRALS
Trigger: GCTGAGCGCCCGCAAGTGTCAGGTGGTGTTCTTCCG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCGGAAGAACACCACCTaGCACTTGCGGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSERKNTT*HLRALS
Trigger: GCTGAGCGCCCGCAAGTGTCAGGTGGTGTTCTTCCG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCTGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLCAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAPLGRT*PCAVKA
Trigger: GGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPPLGRT*PCAVKA
Trigger: GGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEPLGRT*PCAVKA
Trigger: GGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCGGCATCTAGTACAGTaGCCCTCGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSRHLVQ*PSARSW
Trigger: CCAGCTGCGGGCCGAGGGTCACTGTACTAGATGCCG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCGAGGTACCAGGCTGCTaGTCTCTAGCTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAEVPGC*SLAGPC
Trigger: ACAGGGGCCAGCTAGAGATCAGCAGCCTGGTACCTC...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCTCTGTCTGGGGTGGTaGAGCTGCTGGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSELCLGW*SCWVQV
Trigger: GACCTGGACCCAGCAGCTGCACCACCCCAGACAGAG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCCTCTGTCTGGGGTGGTaGAGCTGCTGGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSLCLGW*SCWVQV
Trigger: GACCTGGACCCAGCAGCTGCACCACCCCAGACAGAG...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCACACCACCTGACACTTaGGGGCGCTCAGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLTPPDT*GRSAPW
Trigger: CCAAGGCGCTGAGCGCCCGCAAGTGTCAGGTGGTGT...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMTRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPTRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPTRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGCCATCGGCAGGTGCTGGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTGGGCTGGAATATACTCTATaGAGAGCACAGGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SHRQVLAPAQTTGARGGGLEYTL*RAQGPP
Trigger: TGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAG...CCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CGGCCTGCGGTCCCTCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCAAGGATGCTGCCATCCTaGAGTCCAAGGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: RPAVPRPLPGHSAGCQGPRMLPS*SPRQTV
Trigger: CACTGTCTGCCTTGGACTGCAGGATGGCAGCATCCT...TGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGGACCGCAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTTTGTCCTCCTCGGCCTaGGGTCCCTCGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPLSSSA*GPSASS
Trigger: GGAAGAGGCCGAGGGACCGCAGGCCGAGGAGGACAA...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTTGTCCTCCTCGGCCTaGGGTCCCTCGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQLSSSA*GPSASS
Trigger: GGAAGAGGCCGAGGGACCGCAGGCCGAGGAGGACAA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCAGAGCAGATCTCCTTaGGGTGGGCATCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAQSRSP*GGHHGH
Trigger: GTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGGTGGGTGCCTCTGTCTaGGGTGGTGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQVGASV*GGAAAG
Trigger: CCCAGCAGCTGCACCACCCCAGACAGAGGCACCCAC...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTGGGCTGATGGGCGTCTaGGCTCTCACAGGGGACGTC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACGLMGV*ALTGDV
Trigger: GACGTCCCCTGTGAGAGCCCAGACGCCCATCAGCCC...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAGGGCTGATGGGCGTCTaGGCTCTCACAGGGGACGTC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEGLMGV*ALTGDV
Trigger: GACGTCCCCTGTGAGAGCCCAGACGCCCATCAGCCC...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEHGAQL*RGRFDV
Trigger: GACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCTCAAGCCATCCGGCATaGGGCCCAGCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVSSHPA*GPALAR
Trigger: CCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGA...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGADNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLLLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCACCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: ISLRWASRAQGRLRTQTSPKVAL*KGSADR
Trigger: GCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGG...TGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCACAGGGGCCGCCACTaGGAAGGACTTGACCGTGCG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMHRGRH*EGLDRA
Trigger: CGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACACAGGGGCCGCCACTaGGAAGGACTTGACCGTGCG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAHRGRH*EGLDRA
Trigger: CGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCACAGGGGCCGCCACTaGGAAGGACTTGACCGTGCG +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPHRGRH*EGLDRA
Trigger: CGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEELGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQLGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCCCTCGGCCCGCAGCTaGCCCATGCAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPPSARS*PMQHLP
Trigger: TGGAAGATGCTGCATGGGCCAGCTGCGGGCCGAGGG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLPSASS*SLRRMS
Trigger: TGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGAGCCTGCCCGTCTaGCTTGTCCTCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSMSLPV*LVLLGL
Trigger: CAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCAT...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCATGAGCCTGCCCGTCTaGCTTGTCCTCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLMSLPV*LVLLGL
Trigger: CAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCAT...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPSSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACSSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLAIGRC*LPHRQQ
Trigger: CTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGC...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
3UTR CAA 72 bp TGTCCACCAGAGATGATAGCCACAGAGCAGATCTCCTaGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CPPEMIATEQIS*RWASRAQGRLR
Trigger: CCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGTGGCTATCATCTCTGGTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
3UTR CAA 72 bp TCTATGCAGAGCACAGGGGCCGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGCCGGTTCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SMQSTGAATGKD*TVRGEGRFREK
Trigger: CTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTGCTCTGCATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR TCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCGGAAGAACACCACCTaGCACTTGCGGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPRKNTT*HLRALS
Trigger: GCTGAGCGCCCGCAAGTGTCAGGTGGTGTTCTTCCG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCTGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLCAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp CACAGAGCAGATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACTCCAGAGTCTCCGTGTaGAAGAGGCGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HRADLLAVGITGTGPAPDSRVSV*KRRMEE
Trigger: CTCTTCCATCCGCCTCTTTCACACGGAGACTCTGGA...GTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCAGGCACGGTTTCATaGGCCTGCCCGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACPGTVS*ACPSGL
Trigger: CAAGCCAGACGGGCAGGCTCATGAAACCGTGCCTGG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCCAGGCACGGTTTCATaGGCCTGCCCGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPPGTVS*ACPSGL
Trigger: CAAGCCAGACGGGCAGGCTCATGAAACCGTGCCTGG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCCAGGCACGGTTTCATaGGCCTGCCCGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQPGTVS*ACPSGL
Trigger: CAAGCCAGACGGGCAGGCTCATGAAACCGTGCCTGG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCTTGGCGGCCTTCATaGGCTGGGTCATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGASWRPS*AGSSWA
Trigger: AGCCCAAGATGACCCAGCTCATGAAGGCCGCCAAGA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS-3UTR TCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCGAGGTACCAGGCTGCTaGTCTCTAGCTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSEVPGC*SLAGPC
Trigger: ACAGGGGCCAGCTAGAGATCAGCAGCCTGGTACCTC...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCTCTGTCTGGGGTGGTaGAGCTGCTGGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPLCLGW*SCWVQV
Trigger: GACCTGGACCCAGCAGCTGCACCACCCCAGACAGAG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCGTGACTCCACGTAGCTaGCTTCGCTCTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLVTPRS*LRSARW
Trigger: CCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCAC...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGACACCACCTGACACTTaGGGGCGCTCAGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMTPPDT*GRSAPW
Trigger: CCAAGGCGCTGAGCGCCCGCAAGTGTCAGGTGGTGT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAACACCACCTGACACTTaGGGGCGCTCAGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEETPPDT*GRSAPW
Trigger: CCAAGGCGCTGAGCGCCCGCAAGTGTCAGGTGGTGT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCGGCCAACCGCTTCTaGTCGTTCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGASANRF*SFSFSA
Trigger: GGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCTCGGCCAACCGCTTCTaGTCGTTCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLSANRF*SFSFSA
Trigger: GGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGA...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPATRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMTRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACTRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVTRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCGAGGGATCGGTGGCTaGCCGGCTCTCCTCTGCACC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGRGIGG*PALLCT
Trigger: GGTGCAGAGGAGAGCCGGGCAGCCACCGATCCCTCG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCAGGCAGACAGTGGGATaGACTGTGACCGAGGGATCG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLRQTVG*TVTEGS
Trigger: CGATCCCTCGGTCACAGTGCATCCCACTGTCTGCCT...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGGCAGGATGCCTTTCTTaGGGGTCAGCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEAGCLS*GSAPEL
Trigger: CAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGC...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCGCAGGATGCCTTTCTTaGGGGTCAGCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLAGCLS*GSAPEL
Trigger: CAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGC...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCAGAGCAGATCTCCTTaGGGTGGGCATCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEQSRSP*GGHHGH
Trigger: GTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCCTATGGCAGGCTGTaGAGGAGGGTTCGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGASYGRL*RRVRGS
Trigger: GCTTCCTCGAACCCTCCTCCACAGCCTGCCATAGGA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCATGCCTCTGTCTGGGGTaGTGCAGCTGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSACLCLG*CSCWVQ
Trigger: CTGGACCCAGCAGCTGCACCACCCCAGACAGAGGCA...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGCCTCTGTCTGGGGTaGTGCAGCTGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQCLCLG*CSCWVQ
Trigger: CTGGACCCAGCAGCTGCACCACCCCAGACAGAGGCA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCTCTTCCGCTTCCAGCTaGAGCGCCGGACCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSSSASS*SAGPQR
Trigger: TCTCTGGGGTCCGGCGCTCCAGCTGGAAGCGGAAGA...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTCTTCCGCTTCCAGCTaGAGCGCCGGACCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPSSASS*SAGPQR
Trigger: TCTCTGGGGTCCGGCGCTCCAGCTGGAAGCGGAAGA...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTCCAATCTTCTCTGTaGAGTCCCACTCGGCCACGC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLQSSL*SPTRPR
Trigger: GCGTGGCCGAGTGGGACTCCACAGAGAAGATTGGAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CACTCCGCAGGATGTCAGGGGCCAGGATGCTCATGGCCACAGCCAGGAAGGCCAGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HSAGCQGPGCSWPQPGRPDNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...TGGCCTTCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACATCCTGCGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGTGGATCTCAGCCACCTaGTCGGCCAACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEWISAT*SANRFC
Trigger: GCAGAAGCGGTTGGCCGACCAGGTGGCTGAGATCCA...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCTGGATCTCAGCCACCTaGTCGGCCAACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSWISAT*SANRFC
Trigger: GCAGAAGCGGTTGGCCGACCAGGTGGCTGAGATCCA...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLTSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CTGGCCACCAGCACCCTCCTGACCACCGCCAACCCAAAGGTAGCCCTGTGGAAGCCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LATSTLLTTANPKVALWKPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...CTTCCACAGGGCTACCTTTGGGTTGGCGGTGGTCAGGAGGGTGCTGGTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPLLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSALLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEELLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CACAGAGCAGATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HRADLLAVGITGTGPAPDHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...GTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSAQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCCACAGTTATGCACATaGGAGGGCTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAPQLCT*EGSPGP
Trigger: GGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCCTCGGCCCGCAGCTaGCCCATGCAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVPSARS*PMQHLP
Trigger: TGGAAGATGCTGCATGGGCCAGCTGCGGGCCGAGGG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEPSASS*SLRRMS
Trigger: TGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAATGAGCCTGCCCGTCTaGCTTGTCCTCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEMSLPV*LVLLGL
Trigger: CAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCAT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAG +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSAIGRC*LPHRQQ
Trigger: CTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGC...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPAIGRC*LPHRQQ
Trigger: CTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGC...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAG +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPAIGRC*LPHRQQ
Trigger: CTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGC...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSQISLR*ASRAQG
Trigger: GCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPQISLR*ASRAQG
Trigger: GCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAATGGGGGTGAGGGTGTaGCTGGCGAAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAMGVRV*LAKTLL
Trigger: CAGGAGGGTCTTCGCCAGCCACACCCTCACCCCCAT...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105797.9
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTGCTGGGTCCAGGTCTaGGCCCGGGACAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMCWVQV*ARDSVK
Trigger: TTTGACACTGTCCCGGGCTCAGACCTGGACCCAGCA...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCATGCTGGGTCCAGGTCTaGGCCCGGGACAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSACWVQV*ARDSVK
Trigger: TTTGACACTGTCCCGGGCTCAGACCTGGACCCAGCA...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCGCTCGGCCCCGGGCTaGTGGGCGTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPRSAPG*WASGLS
Trigger: TGAGAGCCCAGACGCCCATCAGCCCGGGGCCGAGCG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCGCTCGGCCCCGGGCTaGTGGGCGTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPRSAPG*WASGLS
Trigger: TGAGAGCCCAGACGCCCATCAGCCCGGGGCCGAGCG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCTGGCGCGGGAGGTTTaGTGTCTGTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLLAREV*CLSHQP
Trigger: AGGTTGGTGTGACAGACATCAAACCTCCCGCGCCAG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCGAGTATCCGCTTCAGTaGCTCCACGTAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAEYPLQ*LHVAAF
Trigger: GAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTC...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSAGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAATGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEECAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCATGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSACAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPCAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPACAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGCGCTCCTTGGACTTaGTCAGCTGCCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQCAPWT*SAALGL
Trigger: GAGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCGGCATCTAGTACAGTaGCCCTCGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQRHLVQ*PSARSW
Trigger: CCAGCTGCGGGCCGAGGGTCACTGTACTAGATGCCG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GACAATGACACCCTGGTCAGTGCCTACCCAGAGCAGACCCTGGCAGATGAGGAGCGGCATCTAGTACAGTaGCCCTCGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DNDTLVSAYPEQTLADEERHLVQ*PSARSW
Trigger: CCAGCTGCGGGCCGAGGGTCACTGTACTAGATGCCG...CTCCTCATCTGCCAGGGTCTGCTCTGGGTAGGCACTGACCAGGGTGTCATTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCGCCACAGGTCCACAGTaGCCATTGAGAGACACCATG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLATGPQ*PLRDTM
Trigger: CATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGC...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTGAGGTACCAGGCTGCTaGTCTCTAGCTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACEVPGC*SLAGPC
Trigger: ACAGGGGCCAGCTAGAGATCAGCAGCCTGGTACCTC...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCGTGACTCCACGTAGCTaGCTTCGCTCTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLVTPRS*LRSARW
Trigger: CCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCAC...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEETLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACTLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSATLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AAGGACTTGACCGTGCGCGGTGAAGGCCGGTTCAGGGAGAAGATCTCCACCTGGACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KDLTVRGEGRFREKISTWTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...CCAGGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR GCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSAMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCAGGATGCTGCCATCCTaGAGTCCAAGGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLRMLPS*SPRQTV
Trigger: CACTGTCTGCCTTGGACTGCAGGATGGCAGCATCCT...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSLGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSELGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CCAGACGTCAGGGTCATCGGCCATCTCGTAGATGGACCCGTCCTCCTCACTGTGCCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PDVRVIGHLVDGPVLLTVPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...CACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCGATGACCCTGACGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCATGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSACQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPACQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTTGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACCQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGTTGTCCTCCTCGGCCTaGGGTCCCTCGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQLSSSA*GPSASS
Trigger: GGAAGAGGCCGAGGGACCGCAGGCCGAGGAGGACAA...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAGCAGGATGCCTTTCTTaGGGGTCAGCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEAGCLS*GSAPEL
Trigger: CAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGC...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACAGAGCAGATCTCCTTaGGGTGGGCATCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAQSRSP*GGHHGH
Trigger: GTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCAGAGCAGATCTCCTTaGGGTGGGCATCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQQSRSP*GGHHGH
Trigger: GTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCAGAGCAGATCTCCTTaGGGTGGGCATCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACQSRSP*GGHHGH
Trigger: GTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCAACCAGGCCAGAGCTaGTGTCCTCCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEQPGQS*CPPPHH
Trigger: GTGATGAGGAGGAGGACACCAGCTCTGGCCTGGTTG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGTCTCCAGCCCATCCCTaGTCCCGCTCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQSPAHP*SRSWRP
Trigger: AGGCCGCCAAGAGCGGGACCAGGGATGGGCTGGAGA...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTCTCCAGCCCATCCCTaGTCCCGCTCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGSPAHP*SRSWRP
Trigger: AGGCCGCCAAGAGCGGGACCAGGGATGGGCTGGAGA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVHGAQL*RGRFDV
Trigger: GACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTCAAGCCATCCGGCATaGGGCCCAGCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVASSHPA*GPALAR
Trigger: CCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGA...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTTCGCTCTGCACGATaGAGCCTAGGATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLRSAR*SLGCVS
Trigger: GGAGACACATCCTAGGCTCCATCGTGCAGAGCGAAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAGGGCGCTCAGCGCCTTaGGCTCCATCTCCATTAGTG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEGRSAP*APSPLV
Trigger: CACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCC...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGGGCGCTCAGCGCCTTaGGCTCCATCTCCATTAGTG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMGRSAP*APSPLV
Trigger: CACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCC...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGGGCGCTCAGCGCCTTaGGCTCCATCTCCATTAGTG +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSAGRSAP*APSPLV
Trigger: CACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCC...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGGGCGCTCAGCGCCTTaGGCTCCATCTCCATTAGTG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAGRSAP*APSPLV
Trigger: CACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSDNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPADNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGATCTCAGCCACCTaGTCGGCCAACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAWISAT*SANRFC
Trigger: GCAGAAGCGGTTGGCCGACCAGGTGGCTGAGATCCA...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGGATCTCAGCCACCTaGTCGGCCAACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPWISAT*SANRFC
Trigger: GCAGAAGCGGTTGGCCGACCAGGTGGCTGAGATCCA...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGASGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLSGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCCACAGTTATGCACATaGGAGGGCTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLPQLCT*EGSPGP
Trigger: GGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCCTCGGCCCGCAGCTaGCCCATGCAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPSARS*PMQHLP
Trigger: TGGAAGATGCTGCATGGGCCAGCTGCGGGCCGAGGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQTQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACTQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQPSASS*SLRRMS
Trigger: TGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCGCCATCGGCAGGTGCTaGCTCCCGCACAGACAACAG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVAIGRC*LPHRQQ
Trigger: CTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGC...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
3UTR CAA 72 bp GTGGAGCGTAGGCGGTATTGGAGCAGGATGCCTTTCTaGCGGGTCAGCTCCCGAGCTGTGTGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VERRRYWSRMPF*RVSSRAVWLSG
Trigger: GCCTGACAGCCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATACCGCCTACGCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACTGGCGCGGGAGGTTTaGTGTCTGTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSALAREV*CLSHQP
Trigger: AGGTTGGTGTGACAGACATCAAACCTCCCGCGCCAG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCTGGCGCGGGAGGTTTaGTGTCTGTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMLAREV*CLSHQP
Trigger: AGGTTGGTGTGACAGACATCAAACCTCCCGCGCCAG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACTGGCGCGGGAGGTTTaGTGTCTGTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEELAREV*CLSHQP
Trigger: AGGTTGGTGTGACAGACATCAAACCTCCCGCGCCAG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCGGAAGAACACCACCTaGCACTTGCGGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQRKNTT*HLRALS
Trigger: GCTGAGCGCCCGCAAGTGTCAGGTGGTGTTCTTCCG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCGGCATCTAGTACAGTaGCCCTCGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVARHLVQ*PSARSW
Trigger: CCAGCTGCGGGCCGAGGGTCACTGTACTAGATGCCG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCGCCTCGAAGCTTTGCTaGGTTTGCAAAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSASKLC*VCKVAA
Trigger: TGCCGCCACTTTGCAAACTCAGCAAAGCTTCGAGGC...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GCACGGTTTCATGAGCCTGCCCGTCTGGCTTGTCCTCCTCGGCCTGCGGTCCCTCTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ARFHEPARLACPPRPAVPLSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...AGGGACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCATGAAACCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCTCCAGAGTCTCCGTGTaGAAGAGGCGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLSRVSV*KRRMEE
Trigger: CTCTTCCATCCGCCTCTTTCACACGGAGACTCTGGA...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCCAGGCACGGTTTCATaGGCCTGCCCGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGPGTVS*ACPSGL
Trigger: CAAGCCAGACGGGCAGGCTCATGAAACCGTGCCTGG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTTGGCGGCCTTCATaGGCTGGGTCATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMSWRPS*AGSSWA
Trigger: AGCCCAAGATGACCCAGCTCATGAAGGCCGCCAAGA...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCTCTGTCTGGGGTGGTaGAGCTGCTGGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQLCLGW*SCWVQV
Trigger: GACCTGGACCCAGCAGCTGCACCACCCCAGACAGAG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGGTGACTCCACGTAGCTaGCTTCGCTCTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQVTPRS*LRSARW
Trigger: CCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCAC...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGACACCACCTGACACTTaGGGGCGCTCAGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQTPPDT*GRSAPW
Trigger: CCAAGGCGCTGAGCGCCCGCAAGTGTCAGGTGGTGT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATCGGCCAACCGCTTCTaGTCGTTCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPASANRF*SFSFSA
Trigger: GGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGA...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTTCGGCCAACCGCTTCTaGTCGTTCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACSANRF*SFSFSA
Trigger: GGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGA...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCGGCCAACCGCTTCTaGTCGTTCAGCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMSANRF*SFSFSA
Trigger: GGCTGAGAAGCTGAACGAGCAGAAGCGGTTGGCCGA...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACACTCTTGGTCAGCTaGTGGATCTCAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSTLLVS*WISATW
Trigger: CCAGGTGGCTGAGATCCAGCAGCTGACCAAGAGTGT...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCCCTCCAGTCGGGGTACAGGCAACAGGACAATGACACCCTGGTCAGTGCCTACACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALQSGYRQQDNDTLVSAYTLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...GTAGGCACTGACCAGGGTGTCATTGTCCTGTTGCCTGTACCCCGACTGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGACGGCCAGGTCCTTCTaGAGGTCCTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQTARSF*RSCSSW
Trigger: CCAGGAGCTGCAGGACCTGCAGAAGGACCTGGCCGT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGTCATCGGCCATCTCGTAGATGGACCCGTCCTCCTCACTGTGTTCCAGAGCCGATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GHRPSRRWTRPPHCVPEPMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...CGGCTCTGGAACACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCGATGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQTRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CCTCCTCCTCCGGATCTGGAATATACTCTATGCAGAGCACAGGGGCCGCCACTGACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: PPPPDLEYTLCRAQGPPLTRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...CAGTGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAGATCCGGAGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR GCA 90 bp ACAGGGGCCGCCACTGGGAAGGACTTGACCGTGCGCGGTGAAGGCCGGTTCAGGACCAGAACGGGGCTTTaGTTTTCTTGTCCTCATCGG +
Preference number: 4 (lower is better)
Translates to: TGAATGKDLTVRGEGRFRTRTGL*FSCPHR
Trigger: CCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGT...CCTGAACCGGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR GCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVATRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGAGGCAGACAGTGGGATaGACTGTGACCGAGGGATCG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMRQTVG*TVTEGS
Trigger: CGATCCCTCGGTCACAGTGCATCCCACTGTCTGCCT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCAGGCAGACAGTGGGATaGACTGTGACCGAGGGATCG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPRQTVG*TVTEGS
Trigger: CGATCCCTCGGTCACAGTGCATCCCACTGTCTGCCT...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCATACAGTAGGATGCTaGCATCCTGCAGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAHTVGC*HPAVQG
Trigger: GCCTTGGACTGCAGGATGGCAGCATCCTACTGTATG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPLGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSALGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACTGTGTTCCAGAGCCGAGCCATCGGCAGGTGCTGGCTCCCGCACAGACAACAGCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TVFQSRAIGRCWLPHRQQLGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...CTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCTCGGCTCTGGAACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACCATCCAGACACCGCTaGCGGCTTTCACCATGTGAG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAPSRHR*RLSPCE
Trigger: CTCACATGGTGAAAGCCGGCAGCGGTGTCTGGATGG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCCATCCAGACACCGCTaGCGGCTTTCACCATGTGAG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQPSRHR*RLSPCE
Trigger: CTCACATGGTGAAAGCCGGCAGCGGTGTCTGGATGG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCCATCCAGACACCGCTaGCGGCTTTCACCATGTGAG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMPSRHR*RLSPCE
Trigger: CTCACATGGTGAAAGCCGGCAGCGGTGTCTGGATGG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCTGGTGACACATAGGTaGTTTTGGCCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSELVTHR*FWPGRR
Trigger: CCTCCTGCCAGGCCAAAAGCACCTATGTGTCACCAG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCTGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVCQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGCGAAGACCCTCCTaGCTGGCCCACATATTGCCT +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAWRRPS*LAHILP
Trigger: AGGCAATATGTGGGCCAGGCAGGAGGGTCTTCGCCA...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105797.9
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTCCTATGGCAGGCTGTaGAGGAGGGTTCGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPSYGRL*RRVRGS
Trigger: GCTTCCTCGAACCCTCCTCCACAGCCTGCCATAGGA...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTGCCTCTGTCTGGGGTaGTGCAGCTGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGCLCLG*CSCWVQ
Trigger: CTGGACCCAGCAGCTGCACCACCCCAGACAGAGGCA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGTCTTCCGCTTCCAGCTaGAGCGCCGGACCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQSSASS*SAGPQR
Trigger: TCTCTGGGGTCCGGCGCTCCAGCTGGAAGCGGAAGA...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGGGAGAAAGCTTGGGCTaGAAGGACCCTCGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEGESLG*KDPRCL
Trigger: TAAGCACCGAGGGTCCTTCCAGCCCAAGCTTTCTCC...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAGGTCTGGAGAAAGCTTaGGCTGGAAGGACCCTCGGT +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEGLEKA*AGRTLG
Trigger: ACCGAGGGTCCTTCCAGCCCAAGCTTTCTCCAGACC...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCGCGGCCTTCATGAGCTaGGTCATCTTACAATCGCAC +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAAAFMS*VILQSH
Trigger: GTGCGATTGTAAGATGACCCAGCTCATGAAGGCCGC...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTCTCCAGCCCATCCCTaGTCCCGCTCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVASPAHP*SRSWRP
Trigger: AGGCCGCCAAGAGCGGGACCAGGGATGGGCTGGAGA...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGHGAQL*RGRFDV
Trigger: GACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACTCCAATCTTCTCTGTaGAGTCCCACTCGGCCACGC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEELQSSL*SPTRPR
Trigger: GCGTGGCCGAGTGGGACTCCACAGAGAAGATTGGAG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACTCCAATCTTCTCTGTaGAGTCCCACTCGGCCACGC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPALQSSL*SPTRPR
Trigger: GCGTGGCCGAGTGGGACTCCACAGAGAAGATTGGAG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVDNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGAGAAGCAGCTGCCGCTaGCCAGAGGTCAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMRSSCR*PEVNSL
Trigger: CAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCTTCT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAGAAGCAGCTGCCGCTaGCCAGAGGTCAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEERSSCR*PEVNSL
Trigger: CAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCTTCT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGAGAAGCAGCTGCCGCTaGCCAGAGGTCAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQRSSCR*PEVNSL
Trigger: CAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCTTCT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAAGAAGCAGCTGCCGCTaGCCAGAGGTCAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSARSSCR*PEVNSL
Trigger: CAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCTTCT...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCTGGATGGGCAGGGTAGACAGCAGAAGCAGCTGCCGCTaGCCAGAGGTCAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: MSAVIQLPPDLWMGRVDSRSSCR*PEVNSL
Trigger: CAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCTTCT...GCTGTCTACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATCACTGCGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEETSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPTSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACTSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQTSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSSGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPPKVAL*KGSADR
Trigger: GCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAPKVAL*KGSADR
Trigger: GCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACPKVAL*KGSADR
Trigger: GCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCACAGGGGCCGCCACTaGGAAGGACTTGACCGTGCG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAHRGRH*EGLDRA
Trigger: CGCACGGTCAAGTCCTTCCCAGTGGCGGCCCCTGTG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVALGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCCACAGTTATGCACATaGGAGGGCTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPPQLCT*EGSPGP
Trigger: GGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCACAGTTATGCACATaGGAGGGCTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSPQLCT*EGSPGP
Trigger: GGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCCCTCGGCCCGCAGCTaGCCCATGCAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAPSARS*PMQHLP
Trigger: TGGAAGATGCTGCATGGGCCAGCTGCGGGCCGAGGG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTGTGAAAGAGGCGGATaGAAGAGCCAGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGACERGG*KSQRRR
Trigger: CCTTCTCCTCTGGCTCTTCCATCCGCCTCTTTCACA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVPSASS*SLRRMS
Trigger: TGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVASSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACRPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPARPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGCGGCCTTCATGAGCTaGGTCATCTTGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAAAFMS*VILGWK
Trigger: CTTCCAGCCCAAGATGACCCAGCTCATGAAGGCCGC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGTGCTGGGTCCAGGTCTaGGCCCGGGACAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQCWVQV*ARDSVK
Trigger: TTTGACACTGTCCCGGGCTCAGACCTGGACCCAGCA...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGAGTATCCGCTTCAGTaGCTCCACGTAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPEYPLQ*LHVAAF
Trigger: GAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTC...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGAGTATCCGCTTCAGTaGCTCCACGTAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAEYPLQ*LHVAAF
Trigger: GAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCAGGGTCATCGGCCATCTCGCCAAGTGTAATCTGTTaGCCCAGGAAATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SRAQGRLRTQTSGSSAISPSVIC*PRKSCS
Trigger: TGAGCAAGATTTCCTGGGTCAACAGATTACACTTGG...CGAGATGGCCGATGACCCTGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCCTCGAAGCTTTGCTaGGTTTGCAAAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSAASKLC*VCKVAA
Trigger: TGCCGCCACTTTGCAAACTCAGCAAAGCTTCGAGGC...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGCCTCGAAGCTTTGCTaGGTTTGCAAAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMASKLC*VCKVAA
Trigger: TGCCGCCACTTTGCAAACTCAGCAAAGCTTCGAGGC...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCCTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSLSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLLSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTTCCAGAGTCTCCGTGTaGAAGAGGCGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACSRVSV*KRRMEE
Trigger: CTCTTCCATCCGCCTCTTTCACACGGAGACTCTGGA...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTCCAGAGTCTCCGTGTaGAAGAGGCGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQSRVSV*KRRMEE
Trigger: CTCTTCCATCCGCCTCTTTCACACGGAGACTCTGGA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGCCACAGGTCCACAGTaGCCATTGAGAGACACCATG +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPATGPQ*PLRDTM
Trigger: CATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGC...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGCCACAGGTCCACAGTaGCCATTGAGAGACACCATG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAATGPQ*PLRDTM
Trigger: CATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCGCCACAGGTCCACAGTaGCCATTGAGAGACACCATG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPATGPQ*PLRDTM
Trigger: CATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGC...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTAGGGCACCTGCCAGATaGGAAGTGTGCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACRAPAR*EVCCLS
Trigger: AGACAGACAGCACACTTCTCATCTGGCAGGTGCCCT...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGAGGGCACCTGCCAGATaGGAAGTGTGCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQRAPAR*EVCCLS
Trigger: AGACAGACAGCACACTTCTCATCTGGCAGGTGCCCT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCATGAGCGCATGGGGGTaGGGGTGTGGCTGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAMSAWG*GCGWRR
Trigger: TCTTCGCCAGCCACACCCTCACCCCCATGCGCTCAT...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105797.9
CDS-3UTR GCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCACACTCTTGGTCAGCTaGTGGATCTCAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSTLLVS*WISATW
Trigger: CCAGGTGGCTGAGATCCAGCAGCTGACCAAGAGTGT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGTTGGACTTGATCAGCTaGCCTCGGTCTCCATACACC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSELDLIS*PRSPYT
Trigger: GGTGTATGGAGACCGAGGGCAGCTGATCAAGTCCAA...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQTLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGTGGAAGGGAAGTGCTGACCGCCGAGAAGCCCAGCAGGGGAGAGTTAACAGGAACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CGREVLTAEKPSRGELTGTLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...TCCTGTTAACTCTCCCCTGCTGGGCTTCTCGGCGGTCAGCACTTCCCTTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CTCCTCCTCCGGATCTGGAATATACTCTATGCAGAGCACAGGGGCCGCCACTGGATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLRIWNILYAEHRGRHWMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...CCAGTGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAGATCCGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCACCAGAACGGGGCTTTaGTTTTCTTGTCCTCATCGG +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGATRTGL*FSCPHR
Trigger: CCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGT...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGAGGATGCTGCCATCCTaGAGTCCAAGGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQRMLPS*SPRQTV
Trigger: CACTGTCTGCCTTGGACTGCAGGATGGCAGCATCCT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAGGATGCTGCCATCCTaGAGTCCAAGGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEERMLPS*SPRQTV
Trigger: CACTGTCTGCCTTGGACTGCAGGATGGCAGCATCCT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAAGGATGCTGCCATCCTaGAGTCCAAGGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSARMLPS*SPRQTV
Trigger: CACTGTCTGCCTTGGACTGCAGGATGGCAGCATCCT...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTGGTGACACATAGGTaGTTTTGGCCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACLVTHR*FWPGRR
Trigger: CCTCCTGCCAGGCCAAAAGCACCTATGTGTCACCAG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCTGGTGACACATAGGTaGTTTTGGCCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQLVTHR*FWPGRR
Trigger: CCTCCTGCCAGGCCAAAAGCACCTATGTGTCACCAG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACTGGTGACACATAGGTaGTTTTGGCCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPALVTHR*FWPGRR
Trigger: CCTCCTGCCAGGCCAAAAGCACCTATGTGTCACCAG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGCQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSRAKGT*QMRSVL
Trigger: CAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQRAKGT*QMRSVL
Trigger: CAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPRAKGT*QMRSVL
Trigger: CAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCT...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCAACCAGGCCAGAGCTaGTGTCCTCCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVQPGQS*CPPPHH
Trigger: GTGATGAGGAGGAGGACACCAGCTCTGGCCTGGTTG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCGGAGAAAGCTTGGGCTaGAAGGACCCTCGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSGESLG*KDPRCL
Trigger: TAAGCACCGAGGGTCCTTCCAGCCCAAGCTTTCTCC...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAHGAQL*RGRFDV
Trigger: GACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGTCAAGCCATCCGGCATaGGGCCCAGCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVSSHPA*GPALAR
Trigger: CCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGA...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTTCGCTCTGCACGATaGAGCCTAGGATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSLRSAR*SLGCVS
Trigger: GGAGACACATCCTAGGCTCCATCGTGCAGAGCGAAG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACTTCGCTCTGCACGATaGAGCCTAGGATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPALRSAR*SLGCVS
Trigger: GGAGACACATCCTAGGCTCCATCGTGCAGAGCGAAG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCGCTCAGCGCCTTaGGCTCCATCTCCATTAGTG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGGRSAP*APSPLV
Trigger: CACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCC...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGDNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCTCCTGGAAGAGGCGTaGGGGGCCCAGGTACACCTT +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVALLEEA*GAQVHL
Trigger: AAGGTGTACCTGGGCCCCCCACGCCTCTTCCAGGAG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPSGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCACAGGCTGCGGGCCTaGGCTCTTGCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPHRLRA*ALAGGQ
Trigger: CTGGCCACCTGCAAGAGCCCAGGCCCGCAGCCTGTG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCTGTGAAAGAGGCGGATaGAAGAGCCAGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSCERGG*KSQRRR
Trigger: CCTTCTCCTCTGGCTCTTCCATCCGCCTCTTTCACA...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQTQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGTQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPSASS*SLRRMS
Trigger: TGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVRPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAQISLR*ASRAQG
Trigger: GCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTAGCTGGCCCCTGTaGTTGGAGGGCTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMSSWPL*LEGLKL
Trigger: CAACTTCAAGCCCTCCAACCACAGGGGCCAGCTAGA...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGAAGACCCTCCTGCCTaGCCCACATATTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQEDPPA*PTYCLG
Trigger: CCCGAGGCAATATGTGGGCCAGGCAGGAGGGTCTTC...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105797.9
3UTR CAA 72 bp CAGGCCACCTGGAGCACCGCCGAAATGGCGGTAGCCTaGTCCACCAGAGATGATAGCCACAGAGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: QATWSTAEMAVA*STRDDSHRADL
Trigger: GAGATCTGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCTCCAGGTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGTCTTGGCGGCCTTCATaGGCTGGGTCATCTTACAAT +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSESWRPS*AGSSYN
Trigger: ATTGTAAGATGACCCAGCTCATGAAGGCCGCCAAGA...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCATGGACTTGGAGAATaGAGCCACAAAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEHGLGE*SHKEVS
Trigger: GGAGACCTCTTTGTGGCTTCATTCTCCAAGTCCATG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp AGCACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCAGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: STAEMAVALSTRDDSHRAGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...TGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPPLGRT*PCAVKA
Trigger: GGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCGGCATCTAGTACAGTaGCCCTCGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPRHLVQ*PSARSW
Trigger: CCAGCTGCGGGCCGAGGGTCACTGTACTAGATGCCG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGCGGCATCTAGTACAGTaGCCCTCGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVRHLVQ*PSARSW
Trigger: CCAGCTGCGGGCCGAGGGTCACTGTACTAGATGCCG...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACLSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSALSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQLSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCATGCCTTTCCCTGTaGTCTTGGGGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPCLSL*SWGCPP
Trigger: TGGAGGGCATCCCCAAGATCACAGGGAAAGGCATGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCTTGAGCTTCAGCTCCTaGATGTCTCTACCCCCAACT +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSLSFSS*MSLPPT
Trigger: AGTTGGGGGTAGAGACATGCAGGAGCTGAAGCTCAA...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp CCAGACGTCAGGGTCATCGGCCATCTCGTAGATGGACCCGTCCTCCTCACTGTGACACTCTTGGTCAGCTaGTGGATCTCAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PDVRVIGHLVDGPVLLTVTLLVS*WISATW
Trigger: CCAGGTGGCTGAGATCCAGCAGCTGACCAAGAGTGT...CACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCGATGACCCTGACGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTTTGGACTTGATCAGCTaGCCTCGGTCTCCATACACC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACLDLIS*PRSPYT
Trigger: GGTGTATGGAGACCGAGGGCAGCTGATCAAGTCCAA...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTTCTTGGCTCCAGCATaGTGGATGAGCAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAFLAPA*WMSRLS
Trigger: AGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACCAGAACGGGGCTTTaGTTTTCTTGTCCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSTRTGL*FSCPHR
Trigger: CCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGT...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCACCAGGCCCCCAAGCTaGAGACTGAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPTRPPS*RLRVRE
Trigger: CTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGT...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACTGGAATATACTCTATaGAGAGCACAGGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSALEYTL*RAQGPP
Trigger: TGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACATACAGTAGGATGCTaGCATCCTGCAGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEHTVGC*HPAVQG
Trigger: GCCTTGGACTGCAGGATGGCAGCATCCTACTGTATG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCATACAGTAGGATGCTaGCATCCTGCAGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQHTVGC*HPAVQG
Trigger: GCCTTGGACTGCAGGATGGCAGCATCCTACTGTATG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCCATCCAGACACCGCTaGCGGCTTTCACCATGTGAG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGPSRHR*RLSPCE
Trigger: CTCACATGGTGAAAGCCGGCAGCGGTGTCTGGATGG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTTTGTCCTCCTCGGCCTaGGGTCCCTCGGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPLSSSA*GPSASS
Trigger: GGAAGAGGCCGAGGGACCGCAGGCCGAGGAGGACAA...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCGCAGGATGCCTTTCTTaGGGGTCAGCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAAGCLS*GSAPEL
Trigger: CAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGC...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVRAKGT*QMRSVL
Trigger: CAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCT...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCAACCAGGCCAGAGCTaGTGTCCTCCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGQPGQS*CPPPHH
Trigger: GTGATGAGGAGGAGGACACCAGCTCTGGCCTGGTTG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGTGGGTGCCTCTGTCTaGGGTGGTGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVVGASV*GGAAAG
Trigger: CCCAGCAGCTGCACCACCCCAGACAGAGGCACCCAC...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGGGCTGATGGGCGTCTaGGCTCTCACAGGGGACGTC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPGLMGV*ALTGDV
Trigger: GACGTCCCCTGTGAGAGCCCAGACGCCCATCAGCCC...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGGGCTGATGGGCGTCTaGGCTCTCACAGGGGACGTC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVGLMGV*ALTGDV
Trigger: GACGTCCCCTGTGAGAGCCCAGACGCCCATCAGCCC...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCTCCAGCCCATCCCTaGTCCCGCTCTTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPSPAHP*SRSWRP
Trigger: AGGCCGCCAAGAGCGGGACCAGGGATGGGCTGGAGA...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGTSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TATTGGAGCAGGATGCCTTTCTTGCGGGTCAGCTCCCGAGCTGTGTGGCTGTCACCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: YWSRMPFLRVSSRAVWLSPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...TGACAGCCACACAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCTCCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQPKVAL*KGSADR
Trigger: GCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGCTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVLGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCCACAGTTATGCACATaGGAGGGCTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGPQLCT*EGSPGP
Trigger: GGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGTGAAAGAGGCGGATaGAAGAGCCAGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQCERGG*KSQRRR
Trigger: CCTTCTCCTCTGGCTCTTCCATCCGCCTCTTTCACA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCCCTCGGCCTCTTCCTaGTCACTCCGCAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAPSASS*SLRRMS
Trigger: TGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCAGCTCCCGAGCTGTGTaGCTGTCAGGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPSSRAV*LSGPGT
Trigger: CGTGCCTGGGCCTGACAGCCACACAGCTCGGGAGCT...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGRPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCTCTAGCTGGCCCCTGTaGTTGGAGGGCTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVSSWPL*LEGLKL
Trigger: CAACTTCAAGCCCTCCAACCACAGGGGCCAGCTAGA...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGTCTTACAATCGCACTTaGGCTTCAGCTCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSESYNRT*ASAPAC
Trigger: ACATGCAGGAGCTGAAGCTCAAGTGCGATTGTAAGA...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTTGGCGGCCTTCATaGGCTGGGTCATCTTACAAT +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMSWRPS*AGSSYN
Trigger: ATTGTAAGATGACCCAGCTCATGAAGGCCGCCAAGA...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCGGAAGAACACCACCTaGCACTTGCGGGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPRKNTT*HLRALS
Trigger: GCTGAGCGCCCGCAAGTGTCAGGTGGTGTTCTTCCG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCATGGACTTGGAGAATaGAGCCACAAAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACHGLGE*SHKEVS
Trigger: GGAGACCTCTTTGTGGCTTCATTCTCCAAGTCCATG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCATGGACTTGGAGAATaGAGCCACAAAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSHGLGE*SHKEVS
Trigger: GGAGACCTCTTTGTGGCTTCATTCTCCAAGTCCATG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCCTGGAGTAGGAGGATaGACTGTGGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLPGVGG*TVEISE
Trigger: TTCAGAGATTTCCACAGTTCATCCTCCTACTCCAGG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCCACTGGGAAGGACTTaGCCGTGCGCGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAPLGRT*PCAVKA
Trigger: GGCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGCCTCGAAGCTTTGCTaGGTTTGCAAAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGASKLC*VCKVAA
Trigger: TGCCGCCACTTTGCAAACTCAGCAAAGCTTCGAGGC...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTCCAGAGTCTCCGTGTaGAAGAGGCGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGSRVSV*KRRMEE
Trigger: CTCTTCCATCCGCCTCTTTCACACGGAGACTCTGGA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGCCACAGGTCCACAGTaGCCATTGAGAGACACCATG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQATGPQ*PLRDTM
Trigger: CATGGTGTCTCTCAATGGTCACTGTGGACCTGTGGC...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTAGGGCACCTGCCAGATaGGAAGTGTGCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGRAPAR*EVCCLS
Trigger: AGACAGACAGCACACTTCTCATCTGGCAGGTGCCCT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCAGGACGGACAGCGGATaGGCGCATGGGGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQARTDSG*AHGGEG
Trigger: ACCCTCACCCCCATGCGCTCATCCGCTGTCCGTCCT...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105797.9
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCACACCACCTGACACTTaGGGGCGCTCAGCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPTPPDT*GRSAPW
Trigger: CCAAGGCGCTGAGCGCCCGCAAGTGTCAGGTGGTGT...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGACACTCTTGGTCAGCTaGTGGATCTCAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQTLLVS*WISATW
Trigger: CCAGGTGGCTGAGATCCAGCAGCTGACCAAGAGTGT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCTTGGACTTGATCAGCTaGCCTCGGTCTCCATACACC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVLDLIS*PRSPYT
Trigger: GGTGTATGGAGACCGAGGGCAGCTGATCAAGTCCAA...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCTTCTTGGCTCCAGCATaGTGGATGAGCAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLFLAPA*WMSRLS
Trigger: AGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAA...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCTTCTTGGCTCCAGCATaGTGGATGAGCAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSFLAPA*WMSRLS
Trigger: AGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAA...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPTRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCACCAGAACGGGGCTTTaGTTTTCTTGTCCTCATCGG +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSTRTGL*FSCPHR
Trigger: CCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGAGGATGCTGCCATCCTaGAGTCCAAGGCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQRMLPS*SPRQTV
Trigger: CACTGTCTGCCTTGGACTGCAGGATGGCAGCATCCT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TCCGCAGTGATCCAGCTGCCCCCTGACCTCTGGATGGGCAGGGTAGACAGCTATCATACAGTAGGATGCTaGCATCCTGCAGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SAVIQLPPDLWMGRVDSYHTVGC*HPAVQG
Trigger: GCCTTGGACTGCAGGATGGCAGCATCCTACTGTATG...ATAGCTGTCTACCCTGCCCATCCAGAGGTCAGGGGGCAGCTGGATCACTGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCCCGCAGCTGGCCCATaGAGCATCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPPAAGP*SIFQAQ
Trigger: CTGAGCCTGGAAGATGCTGCATGGGCCAGCTGCGGG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTCTGGTGACACATAGGTaGTTTTGGCCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGLVTHR*FWPGRR
Trigger: CCTCCTGCCAGGCCAAAAGCACCTATGTGTCACCAG...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCCAGGGGAGCTCCTATaGCAGGCTGTGGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPPGELL*QAVEEG
Trigger: ACCCTCCTCCACAGCCTGCCATAGGAGCTCCCCTGG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCAACCAGGCCAGAGCTaGTGTCCTCCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAQPGQS*CPPPHH
Trigger: GTGATGAGGAGGAGGACACCAGCTCTGGCCTGGTTG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGCCTCTGTCTGGGGTaGTGCAGCTGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPCLCLG*CSCWVQ
Trigger: CTGGACCCAGCAGCTGCACCACCCCAGACAGAGGCA...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCGTGGGTGCCTCTGTCTaGGGTGGTGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAVGASV*GGAAAG
Trigger: CCCAGCAGCTGCACCACCCCAGACAGAGGCACCCAC...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPHGAQL*RGRFDV
Trigger: GACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTAGGACCATGGACTTaGAGAATGAAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLGPWT*RMKPQR
Trigger: TCTTTGTGGCTTCATTCTCCAAGTCCATGGTCCTAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCTAGGACCATGGACTTaGAGAATGAAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGALGPWT*RMKPQR
Trigger: TCTTTGTGGCTTCATTCTCCAAGTCCATGGTCCTAG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCAGAAGCAGCTGCCGCTaGCCAGAGGTCAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVARSSCR*PEVNSL
Trigger: CAAGCTGTTGACCTCTGGCCAGCGGCAGCTGCTTCT...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TGTGGAAGGGAAGTGCTGACCGCCGAGAAGCCCAGCAGGGGAGAGTTAACAGGACACAGCCATCCTGGCTaGTTCTCCTCCCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: CGREVLTAEKPSRGELTGHSHPG*FSSLSP
Trigger: TGGACTAAGGGAGGAGAACCAGCCAGGATGGCTGTG...TCCTGTTAACTCTCCCCTGCTGGGCTTCTCGGCGGTCAGCACTTCCCTTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCAGGTGGCCAGGCACTaGGTACCCGTGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPQVARH*VPVSTL
Trigger: CAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCTGGGCTCTTGCAGGTaGCCAGGCACTGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQALGSCR*PGTGYP
Trigger: CGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCCCTCGGCCCGCAGCTaGCCCATGCAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAPSARS*PMQHLP
Trigger: TGGAAGATGCTGCATGGGCCAGCTGCGGGCCGAGGG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTATGAGCCTGCCCGTCTaGCTTGTCCTCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPMSLPV*LVLLGL
Trigger: CAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCAT...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVARPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPQISLR*ASRAQG
Trigger: GCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGTGCTGGGTCCAGGTCTaGGCCCGGGACAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVCWVQV*ARDSVK
Trigger: TTTGACACTGTCCCGGGCTCAGACCTGGACCCAGCA...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCTTACAATCGCACTTaGGCTTCAGCTCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMSYNRT*ASAPAC
Trigger: ACATGCAGGAGCTGAAGCTCAAGTGCGATTGTAAGA...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCATGGACTTGGAGAATaGAGCCACAAAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVHGLGE*SHKEVS
Trigger: GGAGACCTCTTTGTGGCTTCATTCTCCAAGTCCATG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCAACTGTGGAAATCTCTaGACAGGTTTCACCATCAAC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLNCGNL*TGFTIN
Trigger: GTTGATGGTGAAACCTGTTCAGAGATTTCCACAGTT...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCCTGGAGTAGGAGGATaGACTGTGGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMPGVGG*TVEISE
Trigger: TTCAGAGATTTCCACAGTTCATCCTCCTACTCCAGG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCCTGGAGTAGGAGGATaGACTGTGGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPPGVGG*TVEISE
Trigger: TTCAGAGATTTCCACAGTTCATCCTCCTACTCCAGG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGCCTGGAGTAGGAGGATaGACTGTGGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQPGVGG*TVEISE
Trigger: TTCAGAGATTTCCACAGTTCATCCTCCTACTCCAGG...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGGCTGCTGCGGTCACTaGCACTCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVGCCGH*HSWSAA
Trigger: AGCAGCTGACCAAGAGTGTCAGTGACCGCAGCAGCC...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCCAAGTGTAATCTGTTaGCCCAGGAAATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLPSVIC*PRKSCS
Trigger: TGAGCAAGATTTCCTGGGTCAACAGATTACACTTGG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCCAGGCACGGTTTCATaGGCCTGCCCGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAPGTVS*ACPSGL
Trigger: CAAGCCAGACGGGCAGGCTCATGAAACCGTGCCTGG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCAGGGCACCTGCCAGATaGGAAGTGTGCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVARAPAR*EVCCLS
Trigger: AGACAGACAGCACACTTCTCATCTGGCAGGTGCCCT...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCAGGACATCTTTCCTATaGAGAAAGGAGACTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLRTSFL*RKETFR
Trigger: GCGAAAAGTCTCCTTTCTGCATAGGAAAGATGTCCT...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCACACTCTTGGTCAGCTaGTGGATCTCAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVATLLVS*WISATW
Trigger: CCAGGTGGCTGAGATCCAGCAGCTGACCAAGAGTGT...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTTGGACTTGATCAGCTaGCCTCGGTCTCCATACACC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGLDLIS*PRSPYT
Trigger: GGTGTATGGAGACCGAGGGCAGCTGATCAAGTCCAA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGTTGGACTTGATCAGCTaGCCTCGGTCTCCATACACC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQLDLIS*PRSPYT
Trigger: GGTGTATGGAGACCGAGGGCAGCTGATCAAGTCCAA...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPTLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGACCTTGTTCTGGGCCTaGCCTGCAGCAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVTLFWA*PAAVAF
Trigger: GAAGGCCACTGCTGCAGGGCAGGCCCAGAACAAGGT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGATGAGGAGGGTGATCTaGTCCACCACGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVMRRVI*STTARS
Trigger: GGACCTGGCCGTGGTGGAGCAGATCACCCTCCTCAT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCACCCGCATCAGCCTCTaGAGCGCCAGGCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQATRISL*SARHQS
Trigger: AGACTGGTGCCTGGCGCTGCAGAGGCTGATGCGGGT...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp ACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCAGATCCATCCAGACACCGCTaGCGGCTTTCACCATGTGAG +
Preference number: 4 (lower is better)
Translates to: TAEMAVALSTRDDSHRADPSRHR*RLSPCE
Trigger: CTCACATGGTGAAAGCCGGCAGCGGTGTCTGGATGG...ATCTGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGTGTCAGGGGCCAGGATaGTCATGGCCACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVCQGPG*SWPQPG
Trigger: TCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACA...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGCAGGATGCCTTTCTTaGGGGTCAGCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPAGCLS*GSAPEL
Trigger: CAGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCAGAGCAGATCTCCTTaGGGTGGGCATCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPQSRSP*GGHHGH
Trigger: GTGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTCTTCCGCTTCCAGCTaGAGCGCCGGACCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQASSASS*SAGPQR
Trigger: TCTCTGGGGTCCGGCGCTCCAGCTGGAAGCGGAAGA...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAHGAQL*RGRFDV
Trigger: GACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCTTCGCTCTGCACGATaGAGCCTAGGATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVALRSAR*SLGCVS
Trigger: GGAGACACATCCTAGGCTCCATCGTGCAGAGCGAAG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp CACTCCGCAGGATGTCAGGGGCCAGGATGCTCATGGCCACAGCCAGGAAGGCCATTCTTCAGCATGTCCTaGAGTAGGAGGATGAACTGT +
Preference number: 4 (lower is better)
Translates to: HSAGCQGPGCSWPQPGRPFFSMS*SRRMNC
Trigger: ACAGTTCATCCTCCTACTCCAGGACATGCTGAAGAA...TGGCCTTCCTGGCTGTGGCCATGAGCATCCTGGCCCCTGACATCCTGCGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGACAACCTGTCAGGGTaGCCCCGGGGAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPDNLSG*PRGVFF
Trigger: GAAGAACACTCCCCGGGGCCACCCTGACAGGTTGTC...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCCTGCCCTGCAGCAGTaGCCTTCTTGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPPALQQ*PSWLQH
Trigger: ATGCTGGAGCCAAGAAGGCCACTGCTGCAGGGCAGG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp CACCCTCAGCCTCCTCCTCCGGATCTGGAATATACTCTATGCAGAGCACAGGGGTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPQPPPPDLEYTLCRAQGSGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...CCCCTGTGCTCTGCATAGAGTATATTCCAGATCCGGAGGAGGAGGCTGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTCACCGCCTCATCCTaGTGCGCCTCGAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLTASS*CASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTGTGAAAGAGGCGGATaGAAGAGCCAGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGCERGG*KSQRRR
Trigger: CCTTCTCCTCTGGCTCTTCCATCCGCCTCTTTCACA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVTQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTACCCAGAGCAGACCCTaGCAGATGAGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPTQSRP*QMRRLV
Trigger: CACCAGCCTCCTCATCTGCCAGGGTCTGCTCTGGGT...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCATGAGCCTGCCCGTCTaGCTTGTCCTCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAMSLPV*LVLLGL
Trigger: CAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCAT...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCAGATCTCCTTGCGGTaGGCATCACGGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAQISLR*ASRAQG
Trigger: GCCCTGTGCCCGTGATGCCCACCGCAAGGAGATCTG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTCTAGCTGGCCCCTGTaGTTGGAGGGCTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVASSWPL*LEGLKL
Trigger: CAACTTCAAGCCCTCCAACCACAGGGGCCAGCTAGA...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCTGGCGCGGGAGGTTTaGTGTCTGTCACACCAACCT +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPLAREV*CLSHQP
Trigger: AGGTTGGTGTGACAGACATCAAACCTCCCGCGCCAG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATCTGGAACATGGAGTaGCAATGTAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSIWNME*QCRISF
Trigger: GAAGGAGATTCTACATTGTCACTCCATGTTCCAGAT...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGAACTGTGGAAATCTCTaGACAGGTTTCACCATCAAC +
Preference number: 4 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSENCGNL*TGFTIN
Trigger: GTTGATGGTGAAACCTGTTCAGAGATTTCCACAGTT...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCCAAGTGTAATCTGTTaGCCCAGGAAATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMPSVIC*PRKSCS
Trigger: TGAGCAAGATTTCCTGGGTCAACAGATTACACTTGG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGTGACTCCACGTAGCTaGCTTCGCTCTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPVTPRS*LRSARW
Trigger: CCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCAC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGACTCCACGTAGCTaGCTTCGCTCTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPVTPRS*LRSARW
Trigger: CCATCGTGCAGAGCGAAGGCAGCTACGTGGAGTCAC...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TCCAGTCGGGGTACAGGCAACAGGACAATGACACCCTGGTCAGTGCCTACCCAGACCAGAACGGGGCTTTaGTTTTCTTGTCCTCATCGG +
Preference number: 4 (lower is better)
Translates to: SSRGTGNRTMTPWSVPTQTRTGL*FSCPHR
Trigger: CCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGT...CTGGGTAGGCACTGACCAGGGTGTCATTGTCCTGTTGCCTGTACCCCGACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCTGGAATATACTCTATaGAGAGCACAGGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVALEYTL*RAQGPP
Trigger: TGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCAGGCAGACAGTGGGATaGACTGTGACCGAGGGATCG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPRQTVG*TVTEGS
Trigger: CGATCCCTCGGTCACAGTGCATCCCACTGTCTGCCT...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPLGPQL*TWEGSP
Trigger: TGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGTCCTATGGCAGGCTGTaGAGGAGGGTTCGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVSYGRL*RRVRGS
Trigger: GCTTCCTCGAACCCTCCTCCACAGCCTGCCATAGGA...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTTCCTATGGCAGGCTGTaGAGGAGGGTTCGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPSYGRL*RRVRGS
Trigger: GCTTCCTCGAACCCTCCTCCACAGCCTGCCATAGGA...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCGCGGCCTTCATGAGCTaGGTCATCTTACAATCGCAC +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAAAFMS*VILQSH
Trigger: GTGCGATTGTAAGATGACCCAGCTCATGAAGGCCGC...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTCCAATCTTCTCTGTaGAGTCCCACTCGGCCACGC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLQSSL*SPTRPR
Trigger: GCGTGGCCGAGTGGGACTCCACAGAGAAGATTGGAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCTAGGACCATGGACTTaGAGAATGAAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPLGPWT*RMKPQR
Trigger: TCTTTGTGGCTTCATTCTCCAAGTCCATGGTCCTAG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTTCTTCAGCATGTCCTaGAGTAGGAGGATGAACTGT +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQFFSMS*SRRMNC
Trigger: ACAGTTCATCCTCCTACTCCAGGACATGCTGAAGAA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCATTCTTCAGCATGTCCTaGAGTAGGAGGATGAACTGT +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSAFFSMS*SRRMNC
Trigger: ACAGTTCATCCTCCTACTCCAGGACATGCTGAAGAA...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGACTTCACCACGTACTTaGGCCCCAGAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVTSPRT*APEVPG
Trigger: GCCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCCACAGTTATGCACATaGGAGGGCTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPPQLCT*EGSPGP
Trigger: GGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCGGCCATCTCGTAGATaGACCCGTCCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPRPSRR*TRPPHC
Trigger: ACAGTGAGGAGGACGGGTCCATCTACGAGATGGCCG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGCGGCCTTCATGAGCTaGGTCATCTTGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPAAFMS*VILGWK
Trigger: CTTCCAGCCCAAGATGACCCAGCTCATGAAGGCCGC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS-3UTR TCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGAGTATCCGCTTCAGTaGCTCCACGTAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPEYPLQ*LHVAAF
Trigger: GAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTC...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGAGTATCCGCTTCAGTaGCTCCACGTAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVEYPLQ*LHVAAF
Trigger: GAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTC...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGAGTATCCGCTTCAGTaGCTCCACGTAGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPEYPLQ*LHVAAF
Trigger: GAAGGCAGCTACGTGGAGTCACTGAAGCGGATACTC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGATCTGGAACATGGAGTaGCAATGTAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMIWNME*QCRISF
Trigger: GAAGGAGATTCTACATTGTCACTCCATGTTCCAGAT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCATCTGGAACATGGAGTaGCAATGTAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSIWNME*QCRISF
Trigger: GAAGGAGATTCTACATTGTCACTCCATGTTCCAGAT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGATCTGGAACATGGAGTaGCAATGTAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQIWNME*QCRISF
Trigger: GAAGGAGATTCTACATTGTCACTCCATGTTCCAGAT...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAAGTGTAATCTGTTaGCCCAGGAAATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVPSVIC*PRKSCS
Trigger: TGAGCAAGATTTCCTGGGTCAACAGATTACACTTGG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp ACCCTCCTGACCACCGCCAACCCAAAGGTAGCCCTGTGGAAGGGAAGTGCTGACCCAAGTGTAATCTGTTaGCCCAGGAAATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TLLTTANPKVALWKGSADPSVIC*PRKSCS
Trigger: TGAGCAAGATTTCCTGGGTCAACAGATTACACTTGG...GTCAGCACTTCCCTTCCACAGGGCTACCTTTGGGTTGGCGGTGGTCAGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGCCTCGAAGCTTTGCTaGGTTTGCAAAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPASKLC*VCKVAA
Trigger: TGCCGCCACTTTGCAAACTCAGCAAAGCTTCGAGGC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAAGGACATCTTTCCTATaGAGAAAGGAGACTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GQVPEENPGGPKGPSMSARTSFL*RKETFR
Trigger: GCGAAAAGTCTCCTTTCTGCATAGGAAAGATGTCCT...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGACACTCTTGGTCAGCTaGTGGATCTCAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVTLLVS*WISATW
Trigger: CCAGGTGGCTGAGATCCAGCAGCTGACCAAGAGTGT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGTTCTTGGCTCCAGCATaGTGGATGAGCAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQFLAPA*WMSRLS
Trigger: AGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAA...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTGGTGACACATAGGTaGTTTTGGCCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLVTHR*FWPGRR
Trigger: CCTCCTGCCAGGCCAAAAGCACCTATGTGTCACCAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVRAKGT*QMRSVL
Trigger: CAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTAGAGCCAAGGGCACCTaGCAGATGAGAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPRAKGT*QMRSVL
Trigger: CAGCACACTTCTCATCTGGCAGGTGCCCTTGGCTCT...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCGGTCTGGAGAAAGCTTaGGCTGGAAGGACCCTCGGT +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAGLEKA*AGRTLG
Trigger: ACCGAGGGTCCTTCCAGCCCAAGCTTTCTCCAGACC...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039204.10
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTTCGCTCTGCACGATaGAGCCTAGGATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLRSAR*SLGCVS
Trigger: GGAGACACATCCTAGGCTCCATCGTGCAGAGCGAAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGATACATCTAGGACCATaGACTTGGAGAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMIHLGP*TWRMKP
Trigger: TGGCTTCATTCTCCAAGTCCATGGTCCTAGATGTAT...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAATACATCTAGGACCATaGACTTGGAGAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAIHLGP*TWRMKP
Trigger: TGGCTTCATTCTCCAAGTCCATGGTCCTAGATGTAT...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCTTCTTCAGCATGTCCTaGAGTAGGAGGATGAACTGT +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVFFSMS*SRRMNC
Trigger: ACAGTTCATCCTCCTACTCCAGGACATGCTGAAGAA...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVSGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPSGGTC*PSESPP
Trigger: AGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGA...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCCAAAGGTAGCCCTGTaGAAGGGAAGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAPKVAL*KGSADR
Trigger: GCGGTCAGCACTTCCCTTCCACAGGGCTACCTTTGG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCATCTGGAACATGGAGTaGCAATGTAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVIWNME*QCRISF
Trigger: GAAGGAGATTCTACATTGTCACTCCATGTTCCAGAT...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCAACTGTGGAAATCTCTaGACAGGTTTCACCATCAAC +
Preference number: 4 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVNCGNL*TGFTIN
Trigger: GTTGATGGTGAAACCTGTTCAGAGATTTCCACAGTT...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCCTGGAGTAGGAGGATaGACTGTGGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAPGVGG*TVEISE
Trigger: TTCAGAGATTTCCACAGTTCATCCTCCTACTCCAGG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp AGCACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCACCTGGAGTAGGAGGATaGACTGTGGAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: STAEMAVALSTRDDSHRAPGVGG*TVEISE
Trigger: TTCAGAGATTTCCACAGTTCATCCTCCTACTCCAGG...TGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTTTCACCATGTGAGTaGCACTCACCGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLSPCE*HSPPHP
Trigger: AGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTCCAGAGTCTCCGTGTaGAAGAGGCGGATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQASRVSV*KRRMEE
Trigger: CTCTTCCATCCGCCTCTTTCACACGGAGACTCTGGA...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGCACCGCCGAAATGGCGGTAGCCTTGTCCACCAGAGATGATAGCCACAGAGCATTCTTGGCTCCAGCATaGTGGATGAGCAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: STAEMAVALSTRDDSHRAFLAPA*WMSRLS
Trigger: AGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAA...TGCTCTGTGGCTATCATCTCTGGTGGACAAGGCTACCGCCATTTCGGCGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTCTGGAATATACTCTATaGAGAGCACAGGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: EVSPLFFQGLSGESRPIPLEYTL*RAQGPP
Trigger: TGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAG...AGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCCTGGAATATACTCTATaGAGAGCACAGGGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPLEYTL*RAQGPP
Trigger: TGGCGGCCCCTGTGCTCTGCATAGAGTATATTCCAG...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGCATACAGTAGGATGCTaGCATCCTGCAGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVHTVGC*HPAVQG
Trigger: GCCTTGGACTGCAGGATGGCAGCATCCTACTGTATG...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGTGTGAAAGAGGCGGATaGAAGAGCCAGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVCERGG*KSQRRR
Trigger: CCTTCTCCTCTGGCTCTTCCATCCGCCTCTTTCACA...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGAAAGAGGCGGATaGAAGAGCCAGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPCERGG*KSQRRR
Trigger: CCTTCTCCTCTGGCTCTTCCATCCGCCTCTTTCACA...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTATCTGGAACATGGAGTaGCAATGTAGAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGIWNME*QCRISF
Trigger: GAAGGAGATTCTACATTGTCACTCCATGTTCCAGAT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGAACTGTGGAAATCTCTaGACAGGTTTCACCATCAAC +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQNCGNL*TGFTIN
Trigger: GTTGATGGTGAAACCTGTTCAGAGATTTCCACAGTT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCGTTCTTCAGCATGTCTaGAGCCACAAAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPVLQHV*SHKEVS
Trigger: GGAGACCTCTTTGTGGCTTCAGACATGCTGAAGAAC...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105797.9
CDS-3UTR CCA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCCTAGGACCATGGACTTaGAGAATGAAGCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SPLFFQGLSGESRPIPVALGPWT*RMKPQR
Trigger: TCTTTGTGGCTTCATTCTCCAAGTCCATGGTCCTAG...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGATACATCTAGGACCATaGACTTGGAGAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQIHLGP*TWRMKP
Trigger: TGGCTTCATTCTCCAAGTCCATGGTCCTAGATGTAT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CCA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTATACATCTAGGACCATaGACTTGGAGAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGIHLGP*TWRMKP
Trigger: TGGCTTCATTCTCCAAGTCCATGGTCCTAGATGTAT...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCACCAGAACGGGGCTTTaGTTTTCTTGTCCTCATCGG +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQATRTGL*FSCPHR
Trigger: CCGATGAGGACAAGAAAAGCAAAGCCCCGTTCTGGT...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTTCTTGGCTCCAGCATaGTGGATGAGCAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAFLAPA*WMSRLS
Trigger: AGACAATCTGCTCATCCAGCATGCTGGAGCCAAGAA...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CCA 90 bp AGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTTCTTCAGCATGTCCTaGAGTAGGAGGATGAACTGT +
Preference number: 4 (lower is better)
Translates to: RGFSSVLPRPQWRIQAYPFFSMS*SRRMNC
Trigger: ACAGTTCATCCTCCTACTCCAGGACATGCTGAAGAA...GGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCCCAAGTGTAATCTGTTaGCCCAGGAAATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQAPSVIC*PRKSCS
Trigger: TGAGCAAGATTTCCTGGGTCAACAGATTACACTTGG...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR GCA 90 bp GTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGAGGACATCTTTCCTATaGAGAAAGGAGACTTTTCGC +
Preference number: 4 (lower is better)
Translates to: VSPLFFQGLSGESRPIPVRTSFL*RKETFR
Trigger: GCGAAAAGTCTCCTTTCTGCATAGGAAAGATGTCCT...CACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR TCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCAACTGTGGAAATCTCTaGACAGGTTTCACCATCAAC +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQANCGNL*TGFTIN
Trigger: GTTGATGGTGAAACCTGTTCAGAGATTTCCACAGTT...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR GCA 90 bp TTTTCCAGAGGTTTCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCAGGACATCTTTCCTATaGAGAAAGGAGACTTTTCGC +
Preference number: 4 (lower is better)
Translates to: FSRGFSSVLPRPQWRIQARTSFL*RKETFR
Trigger: GCGAAAAGTCTCCTTTCTGCATAGGAAAGATGTCCT...GGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGAAACCTCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp AGCCATCGGCAGGTGCTGGCTCCCGCACAGACAACAGGGGCCCGGGGAGGTGGGATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: SHRQVLAPAQTTGARGGGMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...CCCACCTCCCCGGGCCCCTGTTGTCTGTGCGGGAGCCAGCACCTGCCGATGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS GCA 90 bp GGGTCCCACGCTCGCTCGCCCGTCCCAGAGCTCAGGGTCCTCATCTaGAGACTGAGGGTCCGGGAGGAGAAAGCGGGGACGCAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSHARSPVPELRVLI*RLRVREEKAGTQQA
Trigger: GGCCTGCTGCGTCCCCGCTTTCTCCTCCCGGACCCTCAGTCTGCAGATGAGGACCCTGAGCTCTGGGACGGGCGAGCGAGCGTGGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR CAA 90 bp CTGCACGGGGCCGCCCGCCCACTCAGGCCACCTGGAGCACCGCCGAAATGGCGGCCAGAGGTCAACAGCTaGTTGAGGCTGCTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: LHGAARPLRPPGAPPKWRPEVNS*LRLLRS
Trigger: TGACCGCAGCAGCCTCAACAAGCTGTTGACCTCTGG...CCGCCATTTCGGCGGTGCTCCAGGTGGCCTGAGTGGGCGGGCGGCCCCGTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CGGCCTGCGGTCCCTCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCAGGGCCCAGGTACACCTaGTTCTGGGCCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: RPAVPRPLPGHSAGCQGPGPRYT*FWACPA
Trigger: TGCAGGGCAGGCCCAGAACAAGGTGTACCTGGGCCC...TGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGGACCGCAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CGGCCTGCGGTCCCTCGGCCTCTTCCTGGTCACTCCGCAGGATGTCAGGGGCCAGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RPAVPRPLPGHSAGCQGPATGKD*TVRGEG
Trigger: GCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGC...TGGCCCCTGACATCCTGCGGAGTGACCAGGAAGAGGCCGAGGGACCGCAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS CCA 90 bp GGAGGAGGAGGACGGACAGCGGATGAGCGCATGGGGGTGAGGGTGTaGCTGGCGAAGACCCTCCTGCCTGGCCCACATATTGCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GGGGRTADERMGVRV*LAKTLLPGPHIASG
Trigger: GCCCGAGGCAATATGTGGGCCAGGCAGGAGGGTCTTCGCCAGCCACACCCTCACCCCCATGCGCTCATCCGCTGTCCGTCCTCCTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105797.9
ENSMUST00000147426.2
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS TCA 90 bp CACCTGAGCAGGACACAGAGGAGGAGGAGGAGGACGGACAGCGGATaGGCGCATGGGGGTGAGGGTGTGGCTGGCGAAGACCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: HLSRTQRRRRRTDSG*AHGGEGVAGEDPPA
Trigger: GGCAGGAGGGTCTTCGCCAGCCACACCCTCACCCCCATGCGCTCATCCGCTGTCCGTCCTCCTCCTCCTCCTCTGTGTCCTGCTCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105797.9
ENSMUST00000147426.2
CDS-3UTR CAA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCCCCACCGCATCCCCATaGCTGACCACAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAPTASP*LTTVGA
Trigger: GGCACCCACTGTGGTCAGCAATGGGGATGCGGTGGG...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCGGGCCCAGGTACACCTaGTTCTGGGCCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLGPRYT*FWACPA
Trigger: TGCAGGGCAGGCCCAGAACAAGGTGTACCTGGGCCC...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLATGKD*TVRGEG
Trigger: GCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGC...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGAATGKD*TVRGEG
Trigger: GCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGC...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGTCCCTGGTCCCGCTCTaGGCGGCCTTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSESLVPL*AAFMSW
Trigger: CCAGCTCATGAAGGCCGCCAAGAGCGGGACCAGGGA...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCTCCCTGGTCCCGCTCTaGGCGGCCTTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLSLVPL*AAFMSW
Trigger: CCAGCTCATGAAGGCCGCCAAGAGCGGGACCAGGGA...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp ATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCACTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: ISLRWASRAQGRLRTQTSLRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...TGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCGGGCCCAGGTACACCTaGTTCTGGGCCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSGPRYT*FWACPA
Trigger: TGCAGGGCAGGCCCAGAACAAGGTGTACCTGGGCCC...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCGGGCCCAGGTACACCTaGTTCTGGGCCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLGPRYT*FWACPA
Trigger: TGCAGGGCAGGCCCAGAACAAGGTGTACCTGGGCCC...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GACTTGACCGTGCGCGGTGAAGGCCGGTTCAGGGAGAAGATCTCCACCTGGCCAATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: DLTVRGEGRFREKISTWPMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...TGGCCAGGTGGAGATCTTCTCCCTGAACCGGCCTTCACCGCGCACGGTCAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140403.2
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEATGKD*TVRGEG
Trigger: GCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGC...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS CCA 90 bp GACCACCTGCTGAGGACTCAAGCCATCCGGCATGGGGCCCAGCTCTaGCGCGGGAGGTTTGATGTCTGTCACACCAACCTCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: DHLLRTQAIRHGAQL*RGRFDVCHTNLQEP
Trigger: GGGCTCCTGGAGGTTGGTGTGACAGACATCAAACCTCCCGCGCCAGAGCTGGGCCCCATGCCGGATGGCTTGAGTCCTCAGCAGGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000147426.2
CDS CCA 90 bp CTGGTCCCGCTCTTGGCGGCCTTCATGAGCTGGGTCATCTTGGGCTaGAAGGACCCTCGGTGCTTAGTGGGCTCGGCCTCCGGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LVPLLAAFMSWVILG*KDPRCLVGSASGLV
Trigger: GACCAAACCGGAGGCCGAGCCCACTAAGCACCGAGGGTCCTTCCAGCCCAAGATGACCCAGCTCATGAAGGCCGCCAAGAGCGGGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS-3UTR CAA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAACCCACCGCATCCCCATaGCTGACCACAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEPTASP*LTTVGA
Trigger: GGCACCCACTGTGGTCAGCAATGGGGATGCGGTGGG...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCCACCGCATCCCCATaGCTGACCACAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACPTASP*LTTVGA
Trigger: GGCACCCACTGTGGTCAGCAATGGGGATGCGGTGGG...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTCCCTGGTCCCGCTCTaGGCGGCCTTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRSLRKIQVGQRVPACPQSLVPL*AAFMSW
Trigger: CCAGCTCATGAAGGCCGCCAAGAGCGGGACCAGGGA...CTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp CTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCCGGGCGCTCAGCGCCTaGGGCTCCATCTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: LWPGQVPEENPGGPKGPSRALSA*GSISIS
Trigger: ACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCCG...GCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCCTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLLRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GCACGGTTTCATGAGCCTGCCCGTCTGGCTTGTCCTCCTCGGCCTGCGGTCCCTCACTTCACCACGTACTaGGGCCCCAGAGGTACCAGG +
Preference number: 5 (lower is better)
Translates to: ARFHEPARLACPPRPAVPHFTTY*GPRGTR
Trigger: CCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGTG...AGGGACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGCTCATGAAACCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTGACCTCGCAGCAGTGGCCTTCTaGGCTCCAGCATGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GGPKGPSMSAVIQLPPDLAAVAF*APACWM
Trigger: CATCCAGCATGCTGGAGCCAAGAAGGCCACTGCTGC...GAGGTCAGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCGGGCCCAGGTACACCTaGTTCTGGGCCTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPGPRYT*FWACPA
Trigger: TGCAGGGCAGGCCCAGAACAAGGTGTACCTGGGCCC...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ATCTCCTTGCGGTGGGCATCACGGGCACAGGGCCGGCTCCGGACCCAGACGTCATTGACCCAGGAAATCTaGCTCAGGGGGTTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: ISLRWASRAQGRLRTQTSLTQEI*LRGFGV
Trigger: CACCCCGAACCCCCTGAGCAAGATTTCCTGGGTCAA...TGACGTCTGGGTCCGGAGCCGGCCCTGTGCCCGTGATGCCCACCGCAAGGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAGCCACTGGGAAGGACTaGACCGTGCGCGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: ASVENPGLSLWPGQVPEEATGKD*TVRGEG
Trigger: GCCTTCACCGCGCACGGTCAAGTCCTTCCCAGTGGC...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCACAGAGCAGATCTCCTaGCGGTGGGCATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGATEQIS*RWASRA
Trigger: TGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGT...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS CCA 90 bp GTGCTGACCGCCGAGAAGCCCAGCAGGGGAGAGTTAACAGGACTGTaGACCAGGCCCCCAAGCTGCAGACTGAGGGTCCGGGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VLTAEKPSRGELTGL*TRPPSCRLRVREEK
Trigger: TTTCTCCTCCCGGACCCTCAGTCTGCAGCTTGGGGGCCTGGTCCACAGTCCTGTTAACTCTCCCCTGCTGGGCTTCTCGGCGGTCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS CCA 90 bp TTATGCACATGGGAGGGCTCTCCAGGTCCCAGGGAATGTCACCACTaGTCCGAGGATAGGCAGCGAGGGTCCCGTCCTGGAGGCCGGCAA +
Preference number: 5 (lower is better)
Translates to: LCTWEGSPGPRECHH*SEDRQRGSRPGGRQ
Trigger: TTGCCGGCCTCCAGGACGGGACCCTCGCTGCCTATCCTCGGACCAGTGGTGACATTCCCTGGGACCTGGAGAGCCCTCCCATGTGCATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCCACCGCATCCCCATaGCTGACCACAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVPTASP*LTTVGA
Trigger: GGCACCCACTGTGGTCAGCAATGGGGATGCGGTGGG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCACGGGCGCTCAGCGCCTaGGGCTCCATCTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: GQVPEENPGGPKGPSMSARALSA*GSISIS
Trigger: ACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCCG...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCGGGCGCTCAGCGCCTaGGGCTCCATCTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPRALSA*GSISIS
Trigger: ACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCCG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSELRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLLRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCCACTTCACCACGTACTaGGGCCCCAGAGGTACCAGG +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLHFTTY*GPRGTR
Trigger: CCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGTG...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCGCAGCAGTGGCCTTCTaGGCTCCAGCATGCTGGATG +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLAAVAF*APACWM
Trigger: CATCCAGCATGCTGGAGCCAAGAAGGCCACTGCTGC...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGATGGGCCGGCCAGACTaGTCTGGCTTCCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQMGRPD*SGFPGS
Trigger: GCTCCCCGGGAAGCCAGACAAGTCTGGCCGGCCCAT...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTTGACCCAGGAAATCTaGCTCAGGGGGTTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: AQTLTHTLLLEGPAHLGALTQEI*LRGFGV
Trigger: CACCCCGAACCCCCTGAGCAAGATTTCCTGGGTCAA...GGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TCTCCTCTGTTCTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCGCCTGCCCGTCTGGCTaGTCCTCCTCGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: SPLFFQGLSGESRPIPVAACPSG*SSSACG
Trigger: ACCGCAGGCCGAGGAGGACAAGCCAGACGGGCAGGC...GGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAGAACAGAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGATGAGCTGGGTCATCTaGGGCTGGAAGGACCCTCGG +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEMSWVI*GWKDPR
Trigger: CCGAGGGTCCTTCCAGCCCAAGATGACCCAGCTCAT...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS CCA 90 bp ACTTGTCTGGCTTCCCGGGGAGCAGCAGCCTCAGGCGGCACTTGTTaGCCGAGTGAATCTCCTCCTCCTTCACCCGCATCAGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TCLASRGAAASGGTC*PSESPPPSPASASA
Trigger: TGCAGAGGCTGATGCGGGTGAAGGAGGAGGAGATTCACTCGGCCAACAAGTGCCGCCTGAGGCTGCTGCTCCCCGGGAAGCCAGACAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
ENSMUST00000140403.2
CDS-3UTR CAA 90 bp GAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTTCCCTGGTCCCGCTCTaGGCGGCCTTCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ENPGLSLWPGQVPEENPGSLVPL*AAFMSW
Trigger: CCAGCTCATGAAGGCCGCCAAGAGCGGGACCAGGGA...ACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp TATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCGGGCGCTCAGCGCCTaGGGCTCCATCTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: YPCGLGRSLRKIQVGQRVRALSA*GSISIS
Trigger: ACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCCG...GACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCAGAGGTCAACAGCTaGTTGAGGCTGCTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEPEVNS*LRLLRS
Trigger: TGACCGCAGCAGCCTCAACAAGCTGTTGACCTCTGG...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSLRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTCTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPLRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGCTGCGCTCCTTGGACTaGATCAGCTGCCCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: WPGQVPEENPGGPKGPSMLRSLD*ISCPRS
Trigger: AGACCGAGGGCAGCTGATCAAGTCCAAGGAGCGCAG...CATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCAAGACCCTGCGCTCCTaGGACTTGATCAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLKTLRS*DLISCP
Trigger: AGGGCAGCTGATCAAGTCCAAGGAGCGCAGGGTCTT...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp ACGCTCAGACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGAAGACCCTGCGCTCCTaGGACTTGATCAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: TLRHSHIHSSWRGPPTSEKTLRS*DLISCP
Trigger: AGGGCAGCTGATCAAGTCCAAGGAGCGCAGGGTCTT...CTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGTCTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCACACTTCACCACGTACTaGGGCCCCAGAGGTACCAGG +
Preference number: 5 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAHFTTY*GPRGTR
Trigger: CCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGTG...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCCACTTCACCACGTACTaGGGCCCCAGAGGTACCAGG +
Preference number: 5 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPHFTTY*GPRGTR
Trigger: CCTGGTACCTCTGGGGCCCAAGTACGTGGTGAAGTG...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp GGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTGCAGCAGTGGCCTTCTaGGCTCCAGCATGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GLGRSLRKIQVGQRVPACAAVAF*APACWM
Trigger: CATCCAGCATGCTGGAGCCAAGAAGGCCACTGCTGC...ACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCAGCAGCAGTGGCCTTCTaGGCTCCAGCATGCTGGATG +
Preference number: 5 (lower is better)
Translates to: CGLGRSLRKIQVGQRVPAAAVAF*APACWM
Trigger: CATCCAGCATGCTGGAGCCAAGAAGGCCACTGCTGC...TGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCCAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCAGCAGGATGCCTTTCTaGCGGGTCAGCTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSSRMPF*RVSSRA
Trigger: AGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp TTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCAGCAGGATGCCTTTCTaGCGGGTCAGCTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: FQGLSGESRPIPVAWAGPSRMPF*RVSSRA
Trigger: AGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCT...GGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GGGCAGGTCCCTGAGGAAAATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAAGCAGGATGCCTTTCTaGCGGGTCAGCTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: GQVPEENPGGPKGPSMSASRMPF*RVSSRA
Trigger: AGCTCGGGAGCTGACCCGCAAGAAAGGCATCCTGCT...TGCGGACATGCTGGGACCCTTTGGCCCACCTGGATTTTCCTCAGGGACCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp CTTCCAAGGCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCACAGAGCAGATCTCCTaGCGGTGGGCATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: LPRPQWRIQAYPCGLGRSTEQIS*RWASRA
Trigger: TGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGT...GGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGCCTTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTACAGAGCAGATCTCCTaGCGGTGGGCATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPTEQIS*RWASRA
Trigger: TGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGT...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp GCCTCAGTGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAACAGAGCAGATCTCCTaGCGGTGGGCATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: ASVENPGLSLWPGQVPEETEQIS*RWASRA
Trigger: TGCCCGTGATGCCCACCGCAAGGAGATCTGCTCTGT...TTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS-3UTR CAA 90 bp AATCCAGGTGGGCCAAAGGGTCCCAGCATGTCCGCAGTGATCCAGCTGCCCCCTATGAGCTGGGTCATCTaGGGCTGGAAGGACCCTCGG +
Preference number: 5 (lower is better)
Translates to: NPGGPKGPSMSAVIQLPPMSWVI*GWKDPR
Trigger: CCGAGGGTCCTTCCAGCCCAAGATGACCCAGCTCAT...AGGGGGCAGCTGGATCACTGCGGACATGCTGGGACCCTTTGGCCCACCTGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069623.12
ENSMUST00000097820.9
CDS-3UTR CAA 90 bp ACACTCACACATACACTCCTCCTGGAGGGGCCCGCCCACCTCGGAGCCTCACTCAGCTGGCCCCTGTGGTaGGAGGGCTTGAAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TLTHTLLLEGPAHLGASLSWPLW*EGLKLM
Trigger: CATCAACTTCAAGCCCTCCAACCACAGGGGCCAGCT...GAGTGAGGCTCCGAGGTGGGCGGGCCCCTCCAGGAGGAGTGTATGTGTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069623.12
ENSMUST00000105798.8
ENSMUST00000105799.8
CDS TCA 90 bp CCAGAGGAGAAGGCCATCCAGACACCGCTGCCGGCTTTCACCATGTaGGTGACACTCACCGCCTCATCCTGGTGCGCCTCGAAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: PEEKAIQTPLPAFTM*VTLTASSWCASKLC
Trigger: GCAAAGCTTCGAGGCGCACCAGGATGAGGCGGTGAGTGTCACTCACATGGTGAAAGCCGGCAGCGGTGTCTGGATGGCCTTCTCCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS GCA 90 bp CTGGGCTCTTGCAGGTGGCCAGGCACTGGGTACCCGTGTCCACACTaGCATACAGTAGGATGCTGCCATCCTGCAGTCCAAGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: LGSCRWPGTGYPCPH*HTVGCCHPAVQGRQ
Trigger: CTGTCTGCCTTGGACTGCAGGATGGCAGCATCCTACTGTATGGCAGTGTGGACACGGGTACCCAGTGCCTGGCCACCTGCAAGAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS GCA 90 bp CTTCCAGGCTCAGCAGTGTTCGAATCGGCCCTGGGCCCACAGTTATaGACATGGGAGGGCTCTCCAGGTCCCAGGGAATGTCACCACTGG +
Preference number: 5 (lower is better)
Translates to: LPGSAVFESALGPQL*TWEGSPGPRECHHW
Trigger: CCAGTGGTGACATTCCCTGGGACCTGGAGAGCCCTCCCATGTGCATAACTGTGGGCCCAGGGCCGATTCGAACACTGCTGAGCCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12
ENSMUST00000097820.9
ENSMUST00000105797.9
ENSMUST00000105798.8
ENSMUST00000105799.8
ENSMUST00000138493.8
CDS-3UTR CAA 90 bp TGGAGAATCCAGGCCTATCCCTGTGGCCTGGGCAGGTCCCTGAGGAAAATCCAGCGGGCGCTCAGCGCCTaGGGCTCCATCTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: WRIQAYPCGLGRSLRKIQRALSA*GSISIS
Trigger: ACTAATGGAGATGGAGCCCAAGGCGCTGAGCGCCCG...CTGGATTTTCCTCAGGGACCTGCCCAGGCCACAGGGATAGGCCTGGATTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000039204.10
ENSMUST00000069623.12