Pregenerated sensors for ARHGDIG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073433Ensembl transcript IDs: ENSMUST00000025019.9, ENSMUST00000121959.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGGGACACAGCAGAGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGCAACTGACAAGAAATTaGGAATACAGACCCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGHSREWGTSGHQLGGLGQLTRN*EYRPQV Trigger: CACTTGGGGTCTGTATTCCCAATTTCTTGTCAGTTG...CCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCTCTGCTGTGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| 3UTR-3UTR CAA 90 bp | GGGGGACACAGCAGAGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGGCAACTGACAAGAAATaGGGAATACAGACCCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: GGHSREWGTSGHQLGGLGATDKK*GIQTPS Trigger: ACTTGGGGTCTGTATTCCCAATTTCTTGTCAGTTGC...CCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCTCTGCTGTGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | AGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCGGGGTCCATAATGGGTaGCAGGGGTCCCAGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RVGDIWSPTGRSRECLQVGVHNG*QGSQQR Trigger: GCGCTGCTGGGACCCCTGCCACCCATTATGGACCCC...GACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGTGGCAGACATGGAGGTaGCACTCCCAGGACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WGTSGHQLGGLGNACRSLWQTWR*HSQDRW Trigger: CCACCTGTCCTGGGAGTGGCACCTCCATGTCTGCCA...CAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | ACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGGGGGTCCATAATGGGTaGCAGGGGTCCCAGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TSGHQLGGLGNACRSLQLGVHNG*QGSQQR Trigger: GCGCTGCTGGGACCCCTGCCACCCATTATGGACCCC...CAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | GGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAATGGCAGACATGGAGGTaGCACTCCCAGGACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GTSGHQLGGLGNACRSLQWQTWR*HSQDRW Trigger: CCACCTGTCCTGGGAGTGGCACCTCCATGTCTGCCA...TTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | GGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACATACTCCTGGGCTCTaGGGCCGTAGCTTCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GTSGHQLGGLGNACRSLQHTPGL*GRSFPP Trigger: TGGTGGGAAGCTACGGCCCCAGAGCCCAGGAGTATG...TTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | GAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCACTCCCAGGACAGGTaGTTCAGCCTGTCGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: EWGTSGHQLGGLGNACRSHSQDR*FSLSSS Trigger: TGATGACGACAGGCTGAACCACCTGTCCTGGGAGTG...AGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCGTCCAGTTGCCAGATTaGCAGCATGCTCTTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVGDIWSPTGRSRECLQVVQLPD*QHALLP Trigger: GGGAAGAAGAGCATGCTGGCAATCTGGCAACTGGAC...GACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | ACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGAGTCAGCCTAGTCACCTaGACGTTGGGCAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TGRSRECLQVSATDKKLGVSLVT*TLGRLG Trigger: CCCCAGCCTGCCCAACGTGCAGGTGACTAGGCTGAC...TCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | GCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGAATACAGACCCCAAGTGGGGCAGTCCTGGCAGACATaGAGGTGCCACTCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ACRSLQLTRNWEYRPQVGQSWQT*RCHSQD Trigger: GTCCTGGGAGTGGCACCTCCATGTCTGCCAGGACTG...CCCCACTTGGGGTCTGTATTCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | ACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGATCCCCGGGGTCCAGTTaGCAGATTGCCAGCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: TGRSRECLQVSATDKKLGSPGSS*QIASML Trigger: GAGCATGCTGGCAATCTGGCAACTGGACCCCGGGGA...TCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | CCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGTCCCCGGGGTCCAGTTaGCAGATTGCCAGCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: PTGRSRECLQVSATDKKLSPGSS*QIASML Trigger: GAGCATGCTGGCAATCTGGCAACTGGACCCCGGGGA...CAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | ATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACCACTCCCAGGACAGGTaGTTCAGCCTGTCGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: IWSPTGRSRECLQVSATDHSQDR*FSLSSS Trigger: TGATGACGACAGGCTGAACCACCTGTCCTGGGAGTG...GTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | GGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGAATACAGTCCTGGCAGACATaGAGGTGCCACTCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GRSRECLQVSATDKKLGIQSWQT*RCHSQD Trigger: GTCCTGGGAGTGGCACCTCCATGTCTGCCAGGACTG...TATTCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | CCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGCAGTCCTTCCAGTCCTaGCAGACATGGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTGRSRECLQVSATDKKLQSFQS*QTWRCH Trigger: GTGGCACCTCCATGTCTGCCAGGACTGGAAGGACTG...CAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | CCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGGTCCAGTTGCCAGATTaGCAGCATGCTCTTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PTGRSRECLQVSATDKKLVQLPD*QHALLP Trigger: GGGAAGAAGAGCATGCTGGCAATCTGGCAACTGGAC...CAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR GCA 90 bp | AGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCACCTTGTATTCAATaGCCTCCTTCAGGACAAACA | + |
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Preference number: 4 (lower is better) Translates to: RVGDIWSPTGRSRECLQVSPCIQ*PPSGQT Trigger: TGTTTGTCCTGAAGGAGGGCATTGAATACAAGGTGA...GACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025019.9 |
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| CDS-3UTR CCA 90 bp | TGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGTTCAGGACAAACACCTaGTTTTTCAGTGCATCTAGG | + |
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Preference number: 4 (lower is better) Translates to: WGTSGHQLGGLGNACRSLFRTNT*FFSASR Trigger: CCTAGATGCACTGAAAAACCAGGTGTTTGTCCTGAA...CAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| 3UTR CAA 72 bp | GACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTaGCAGGTCTCTGCAACTGACAAGAAATTGGGAATA | + |
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Preference number: 4 (lower is better) Translates to: DIWSPTGRSREC*QVSATDKKLGI Trigger: TATTCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CCA 90 bp | CCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGTTCAGGACAAACACCTaGTTTTTCAGTGCATCTAGG | + |
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Preference number: 4 (lower is better) Translates to: PTGRSRECLQVSATDKKLFRTNT*FFSASR Trigger: CCTAGATGCACTGAAAAACCAGGTGTTTGTCCTGAA...CAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS GCA 90 bp | GCATCTAGGTCTCCTGTAAGGTCCATGATGATAGGCCCTGGAGCCTaGTCCGTCAGCAGTGTCAGCCTAGTCACCTGCACGTTGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ASRSPVRSMMIGPGA*SVSSVSLVTCTLGR Trigger: CCTGCCCAACGTGCAGGTGACTAGGCTGACACTGCTGACGGAGCAGGCTCCAGGGCCTATCATCATGGACCTTACAGGAGACCTAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | TGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCTAGTCACCTGCACGTaGGGCAGGCTGGGGTCCATA | + |
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Preference number: 5 (lower is better) Translates to: WGTSGHQLGGLGNACRSLLVTCT*GRLGSI Trigger: TATGGACCCCAGCCTGCCCAACGTGCAGGTGACTAG...CAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCGTTGACTCCCCATCCTaGTCAGCCAAGAGGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: RVGDIWSPTGRSRECLQVVDSPS*SAKRTR Trigger: CCGAGTCCTCTTGGCTGACAAGGATGGGGAGTCAAC...GACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | GAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTGGTCCAGTTGCCAGATaGCCAGCATGCTCTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: EWGTSGHQLGGLGNACRSGPVAR*PACSSS Trigger: GGAAGAAGAGCATGCTGGCAATCTGGCAACTGGACC...AGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS TCA 90 bp | TCACAAATTCATACTCCTGGGCTCTGGGGCCGTAGCTTCCCACCATaGAGATGGCCTTGTCCACACGCAGTCCCCGACGATAGGTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SQIHTPGLWGRSFPP*RWPCPHAVPDDRCD Trigger: ATCACACCTATCGTCGGGGACTGCGTGTGGACAAGGCCATCTTCATGGTGGGAAGCTACGGCCCCAGAGCCCAGGAGTATGAATTTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | TGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCCTCATCTGATGGAGTaGACTCCCCATCCTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: WGTSGHQLGGLGNACRSLPHLME*TPHPCQ Trigger: CTGACAAGGATGGGGAGTCAACTCCATCAGATGAGG...CAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGGGACATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCCCTCATCTGATGGAGTaGACTCCCCATCCTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RVGDIWSPTGRSRECLQVPHLME*TPHPCQ Trigger: CTGACAAGGATGGGGAGTCAACTCCATCAGATGAGG...GACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGATGTCCCCCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | GCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGAATACAGACCCCAAGTGGGGCTAGTCACCTGCACGTaGGGCAGGCTGGGGTCCATA | + |
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Preference number: 5 (lower is better) Translates to: ACRSLQLTRNWEYRPQVGLVTCT*GRLGSI Trigger: TATGGACCCCAGCCTGCCCAACGTGCAGGTGACTAG...CCCCACTTGGGGTCTGTATTCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CCA 90 bp | GGGTCCAGTTGCCAGATTGCCAGCATGCTCTTCTTCCCAGGGGCCTaGTACTCTGGTACAATTTCGTCCAGCACCTCATCTGATGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: GSSCQIASMLFFPGA*YSGTISSSTSSDGV Trigger: AACTCCATCAGATGAGGTGCTGGACGAAATTGTACCAGAGTACCAGGCCCCTGGGAAGAAGAGCATGCTGGCAATCTGGCAACTGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | ATCTGGTCACCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACGTGCCAATGCTCCTCTaGGTGCTTCCTCCACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IWSPTGRSRECLQVSATDVPMLL*VLPPLK Trigger: CTTCAGTGGAGGAAGCACCAAGAGGAGCATTGGCAC...GTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGGTGACCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | CCAACTGGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGGTTGACTCCCCATCCTaGTCAGCCAAGAGGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: PTGRSRECLQVSATDKKLVDSPS*SAKRTR Trigger: CCGAGTCCTCTTGGCTGACAAGGATGGGGAGTCAAC...CAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCCAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | GCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGAATACAGACCCCAAGTGGGGGTGCCAATGCTCCTCTaGGTGCTTCCTCCACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ACRSLQLTRNWEYRPQVGVPMLL*VLPPLK Trigger: CTTCAGTGGAGGAAGCACCAAGAGGAGCATTGGCAC...CCCCACTTGGGGTCTGTATTCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS-3UTR CAA 90 bp | GGGAGGTCTAGGGAATGCTTGCAGGTCTCTGCAACTGACAAGAAATTGGGAATACTGACAATCTCCTTGTaGACCTTGAAGGTGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: GRSRECLQVSATDKKLGILTISL*TLKVIF Trigger: GAAGATCACCTTCAAGGTCAACAAGGAGATTGTCAG...TATTCCCAATTTCTTGTCAGTTGCAGAGACCTGCAAGCATTCCCTAGACCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025019.9 |
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| CDS CCA 90 bp | GTGATCTTCACCTTGTATTCAATGCCCTCCTTCAGGACAAACACCTaGTTTTTCAGTGCATCTAGGTCTCCTGTAAGGTCCATGATGATA | + |
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Preference number: 5 (lower is better) Translates to: VIFTLYSMPSFRTNT*FFSASRSPVRSMMI Trigger: TATCATCATGGACCTTACAGGAGACCTAGATGCACTGAAAAACCAGGTGTTTGTCCTGAAGGAGGGCATTGAATACAAGGTGAAGATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025019.9 |
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| CDS CCA 90 bp | TCCTTGTTGACCTTGTATTCAATGCCCTCCTTCAGGACAAACACCTaGTTTTTCAGTGCATCTAGGTCTCCTGTAAGGTCCATGATGATA | + |
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Preference number: 5 (lower is better) Translates to: SLLTLYSMPSFRTNT*FFSASRSPVRSMMI Trigger: TATCATCATGGACCTTACAGGAGACCTAGATGCACTGAAAAACCAGGTGTTTGTCCTGAAGGAGGGCATTGAATACAAGGTCAACAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121959.3 |
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| CDS GCA 72 bp | GGAGCCTGCTCCGTCAGCAGTGTCAGCCTAGTCACCTaGACGTTGGGCAGGCTGGGGTCCATAATGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GACSVSSVSLVT*TLGRLGSIMGG Trigger: GCCACCCATTATGGACCCCAGCCTGCCCAACGTGCAGGTGACTAGGCTGACACTGCTGACGGAGCAGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CAA 72 bp | TCCAGCACCTCATCTGATGGAGTTGACTCCCCATCCTaGTCAGCCAAGAGGACTCGGGCGCACAGCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSTSSDGVDSPS*SAKRTRAHSAS Trigger: GCTGGCGCTGTGCGCCCGAGTCCTCTTGGCTGACAAGGATGGGGAGTCAACTCCATCAGATGAGGTGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CAA 90 bp | ACAATTTCGTCCAGCACCTCATCTGATGGAGTTGACTCCCCATCCTaGTCAGCCAAGAGGACTCGGGCGCACAGCGCCAGCCGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TISSSTSSDGVDSPS*SAKRTRAHSASRSS Trigger: GCTGCTCCGGCTGGCGCTGTGCGCCCGAGTCCTCTTGGCTGACAAGGATGGGGAGTCAACTCCATCAGATGAGGTGCTGGACGAAATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS GCA 72 bp | TCTCCTGTAAGGTCCATGATGATAGGCCCTGGAGCCTaGTCCGTCAGCAGTGTCAGCCTAGTCACCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: SPVRSMMIGPGA*SVSSVSLVTCT Trigger: CGTGCAGGTGACTAGGCTGACACTGCTGACGGAGCAGGCTCCAGGGCCTATCATCATGGACCTTACAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CAA 90 bp | CCTGGTACTCTGGTACAATTTCGTCCAGCACCTCATCTGATGGAGTaGACTCCCCATCCTTGTCAGCCAAGAGGACTCGGGCGCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: PGTLVQFRPAPHLME*TPHPCQPRGLGRTA Trigger: CGCTGTGCGCCCGAGTCCTCTTGGCTGACAAGGATGGGGAGTCAACTCCATCAGATGAGGTGCTGGACGAAATTGTACCAGAGTACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CCA 72 bp | TGCCAGATTGCCAGCATGCTCTTCTTCCCAGGGGCCTaGTACTCTGGTACAATTTCGTCCAGCACCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: CQIASMLFFPGA*YSGTISSSTSS Trigger: AGATGAGGTGCTGGACGAAATTGTACCAGAGTACCAGGCCCCTGGGAAGAAGAGCATGCTGGCAATCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CAA 72 bp | CTGGTACAATTTCGTCCAGCACCTCATCTGATGGAGTaGACTCCCCATCCTTGTCAGCCAAGAGGACTCGGG | + |
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Preference number: 6 (lower is better) Translates to: LVQFRPAPHLME*TPHPCQPRGLG Trigger: CCCGAGTCCTCTTGGCTGACAAGGATGGGGAGTCAACTCCATCAGATGAGGTGCTGGACGAAATTGTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CCA 72 bp | ACCTTGTATTCAATGCCCTCCTTCAGGACAAACACCTaGTTTTTCAGTGCATCTAGGTCTCCTGTAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: TLYSMPSFRTNT*FFSASRSPVRS Trigger: GGACCTTACAGGAGACCTAGATGCACTGAAAAACCAGGTGTTTGTCCTGAAGGAGGGCATTGAATACAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025019.9 ENSMUST00000121959.3 |
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| CDS CAA 90 bp | AGGCCACTGACAATCTCCTTGTTGACCTTGAAGGTGATCTTCACCTaGTATTCAATGCCCTCCTTCAGGACAAACACCTGGTTTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RPLTISLLTLKVIFT*YSMPSFRTNTWFFS Trigger: ACTGAAAAACCAGGTGTTTGTCCTGAAGGAGGGCATTGAATACAAGGTGAAGATCACCTTCAAGGTCAACAAGGAGATTGTCAGTGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025019.9 |
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| CDS CAA 72 bp | ACAATCTCCTTGTTGACCTTGAAGGTGATCTTCACCTaGTATTCAATGCCCTCCTTCAGGACAAACACCTGG | + |
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Preference number: 6 (lower is better) Translates to: TISLLTLKVIFT*YSMPSFRTNTW Trigger: CCAGGTGTTTGTCCTGAAGGAGGGCATTGAATACAAGGTGAAGATCACCTTCAAGGTCAACAAGGAGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025019.9 |
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| CDS CAA 72 bp | AGACATTTGAGGCCACTGACAATCTCCTTGTTGACCTaGAAGGTGATCTTCACCTTGTATTCAATGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RHLRPLTISLLT*KVIFTLYSMPS Trigger: GGAGGGCATTGAATACAAGGTGAAGATCACCTTCAAGGTCAACAAGGAGATTGTCAGTGGCCTCAAATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025019.9 |
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