Pregenerated sensors for ARHGDIB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030220Ensembl transcript IDs: ENSMUST00000032344.12, ENSMUST00000111891.4, ENSMUST00000111892.8, ENSMUST00000154440.2, ENSMUST00000204934.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCTTGACCTTCAGGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATTTGGTGTGTGTGTGTGTGTaGCAGAGAAAGGGCCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: FLTFRTQGGRSQGFKSHLVCVCV*QRKGLA Trigger: AGCTAGGCCCTTTCTCTGTCACACACACACACACAC...CAAATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAATAAACTTCTGAACAGAAGGCCAAGGAGGCGTCAGCCGGAGCTTGCCCATGTTTTAAGTCTCATTTaGAGGGAACACTCTGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KNKLLNRRPRRRQPELAHVLSLI*REHSER Trigger: TCTCTCAGAGTGTTCCCTGCAAATGAGACTTAAAAC...ATGGGCAAGCTCCGGCTGACGCCTCCTTGGCCTTCTGTTCAGAAGTTTATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTTCAAGGAGAGCTCCCCTTaGCAGAGAAGACAACGGGGT | + |
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Preference number: 2 (lower is better) Translates to: QRKANEVLSHTHNDFILFKESSP*QRRQRG Trigger: ACCCCGTTGTCTTCTCTGCCAAGGGGAGCTCTCCTT...GAAAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTGCAAGAATAAACTTCTaGACAGAAGGCCAAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GKGKQMRFSVTHTTILFFARINF*TEGQGG Trigger: GCCTCCTTGGCCTTCTGTTCAGAAGTTTATTCTTGC...AAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTGAACACTCTGAGAGATaGGGTAAGATAAAACATATT | + |
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Preference number: 2 (lower is better) Translates to: GKGKQMRFSVTHTTILFFEHSER*GKIKHI Trigger: AATATGTTTTATCTTACCCCATCTCTCAGAGTGTTC...AAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR TCA 72 bp | GGCCAAGGAGGCGTCAGCCGGAGCTTGCCCATTTCTTaGCCTTCAGGACTCAAGGTGGGAGAAGCCAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: GQGGVSRSLPIS*PSGLKVGEARV Trigger: AACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAAATGGGCAAGCTCCGGCTGACGCCTCCTTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR GCA 72 bp | TCTGAACAGAAGGCCAAGGAGGCGTCAGCCGGAGCTTaGCCATTTCTTGACCTTCAGGACTCAAGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SEQKAKEASAGA*PFLDLQDSRWE Trigger: CTCCCACCTTGAGTCCTGAAGGTCAAGAAATGGGCAAGCTCCGGCTGACGCCTCCTTGGCCTTCTGTTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR TCA 72 bp | TCGAACCGGAAGAACCCAGTGGCAAGAATAAACTTCTaGACAGAAGGCCAAGGAGGCGTCAGCCGGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SNRKNPVARINF*TEGQGGVSRSL Trigger: CAAGCTCCGGCTGACGCCTCCTTGGCCTTCTGTTCAGAAGTTTATTCTTGCCACTGGGTTCTTCCGGTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGAGCTCCCCTTGGCAGAGAAGACAACGGGGTTCATCGAACCGGAAGAACGAGCTTGCCCATTTCTaGACCTTCAGGACTCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: KESSPWQRRQRGSSNRKNELAHF*TFRTQG Trigger: ACCTTGAGTCCTGAAGGTCAAGAAATGGGCAAGCTC...GTTCTTCCGGTTCGATGAACCCCGTTGTCTTCTCTGCCAAGGGGAGCTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR CCA 72 bp | GTTTTAAGTCTCATTTGCAGGGAACACTCTGAGAGATaGGGTAAGATAAAACATATTGGTGATGAAATGTGT | + |
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Preference number: 3 (lower is better) Translates to: VLSLICREHSER*GKIKHIGDEMC Trigger: ACACATTTCATCACCAATATGTTTTATCTTACCCCATCTCTCAGAGTGTTCCCTGCAAATGAGACTTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| 3UTR TCA 72 bp | TGGTACCATATTTATTTAAGGGCAAAGGAAAGCAAATaGGGTTCTCAGTCACACACACAACGATTTTATTCT | + |
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Preference number: 3 (lower is better) Translates to: WYHIYLRAKESK*GSQSHTQRFYS Trigger: AGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTGCCCTTAAATAAATATGGTACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACTGCCTCGGGCCAGCATaGCCTTGGGAGCTTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: TWSGELFWWVRKVTGGTDCLGPA*PWELPL Trigger: TAGAGGAAGCTCCCAAGGGCATGCTGGCCCGAGGCA...GTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGTGCCTCGGGCCAGCATaGCCTTGGGAGCTTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQCLGPA*PWELPL Trigger: TAGAGGAAGCTCCCAAGGGCATGCTGGCCCGAGGCA...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGGGGCCAGCATGCCCTTaGGAGCTTCCTCTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQGPACP*ELPLLE Trigger: CTCCAGTAGAGGAAGCTCCCAAGGGCATGCTGGCCC...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| 3UTR CAA 72 bp | AGGCCAAGGAGGCGTCAGCCGGAGCTTGCCCATTTCTaGACCTTCAGGACTCAAGGTGGGAGAAGCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RPRRRQPELAHF*TFRTQGGRSQG Trigger: ACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAAATGGGCAAGCTCCGGCTGACGCCTCCTTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | ACATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACCGCCTCTTCCAGCTGTaGCTGTGCATCCTTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: TWSGELFWWVRKVTGGTDRLFQL*LCILLR Trigger: ACGGAGAAGGATGCACAGCCACAGCTGGAAGAGGCG...GTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACACTTGTTGTGGTAAGTaGCTCGGGCCAGCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWSGELFWWVRKVTGGTDTCCGK*LGPACP Trigger: AGGGCATGCTGGCCCGAGGCACTTACCACAACAAGT...GTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTGGGCCAGCATGCCCTTaGGAGCTTCCTCTACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GTGREEGVCDDQHGRENSGPACP*ELPLLE Trigger: CTCCAGTAGAGGAAGCTCCCAAGGGCATGCTGGCCC...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACTCCTTGTCCATCTCCTaGAGCTCCTTCAAGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: TWSGELFWWVRKVTGGTDSLSIS*SSFKDF Trigger: GAAGTCCTTGAAGGAGCTGCAGGAGATGGACAAGGA...GTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTGAATTCGTACTCCTCTaGTCGGGGCCCATAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGREEGVCDDQHGRENSEFVLL*SGPIAA Trigger: GGCAGCTATGGGCCCCGACCAGAGGAGTACGAATTC...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | ACATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACCATAGCTGCCAACCATaGATGTGGCTTTATCCACTC | + |
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Preference number: 4 (lower is better) Translates to: TWSGELFWWVRKVTGGTDHSCQP*MWLYPL Trigger: GAGTGGATAAAGCCACATTCATGGTTGGCAGCTATG...GTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGGTTTGTCGTCATCCGTaGAGAAGGACTTGTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQVCRHP*RRTCCG Trigger: ACCACAACAAGTCCTTCTTCACGGATGACGACAAAC...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTACTTGTTGTGGTAAGTaGCTCGGGCCAGCATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GTGREEGVCDDQHGRENSTCCGK*LGPACP Trigger: AGGGCATGCTGGCCCGAGGCACTTACCACAACAAGT...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | AAGAATAAACTTCTGAACAGAAGGCCAAGGAGGCGTCAGCCGGAGCTTGCCCATCGCCTCTTCCAGCTGTaGCTGTGCATCCTTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: KNKLLNRRPRRRQPELAHRLFQL*LCILLR Trigger: ACGGAGAAGGATGCACAGCCACAGCTGGAAGAGGCG...ATGGGCAAGCTCCGGCTGACGCCTCCTTGGCCTTCTGTTCAGAAGTTTATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGGGACTTCTGAGGGGGTaGCTTATAATTGAGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQGLLRG*LIIELA Trigger: AGCAAGCTCAATTATAAGCCACCCCCTCAGAAGTCC...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTGGGGTGGCTTATAATTaGGCTTGCTGTCCAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: GTGREEGVCDDQHGRENSGVAYN*ACCPGR Trigger: ACGACCTGGACAGCAAGCTCAATTATAAGCCACCCC...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | CCCCTTGGCAGAGAAGACAACGGGGTTCATCGAACCGGAAGAACCCAGTGGCAACATAGCTGCCAACCATaGATGTGGCTTTATCCACTC | + |
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Preference number: 4 (lower is better) Translates to: PLGREDNGVHRTGRTQWQHSCQP*MWLYPL Trigger: GAGTGGATAAAGCCACATTCATGGTTGGCAGCTATG...TTGCCACTGGGTTCTTCCGGTTCGATGAACCCCGTTGTCTTCTCTGCCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | CCCCTTGGCAGAGAAGACAACGGGGTTCATCGAACCGGAAGAACCCAGTGGCAAGGACTTCTGAGGGGGTaGCTTATAATTGAGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLGREDNGVHRTGRTQWQGLLRG*LIIELA Trigger: AGCAAGCTCAATTATAAGCCACCCCCTCAGAAGTCC...TTGCCACTGGGTTCTTCCGGTTCGATGAACCCCGTTGTCTTCTCTGCCAAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTTCCTTGTCCATCTCCTaGAGCTCCTTCAAGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: GTGREEGVCDDQHGRENSSLSIS*SSFKDF Trigger: GAAGTCCTTGAAGGAGCTGCAGGAGATGGACAAGGA...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | GGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATTTGCAGGGAACACTCTACTTGTTGTGGTAAGTaGCTCGGGCCAGCATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GLKVGEARVLSLICREHSTCCGK*LGPACP Trigger: AGGGCATGCTGGCCCGAGGCACTTACCACAACAAGT...AGAGTGTTCCCTGCAAATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTCATAGCTGCCAACCATaGATGTGGCTTTATCCACTC | + |
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Preference number: 4 (lower is better) Translates to: GTGREEGVCDDQHGRENSHSCQP*MWLYPL Trigger: GAGTGGATAAAGCCACATTCATGGTTGGCAGCTATG...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGGTGTTTTCTTGTACTTaGTTAGACTCTCGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQVFSCT*LDSRHP Trigger: AGGATGACGAGAGTCTAACCAAGTACAAGAAAACAC...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | TTCTTGACCTTCAGGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATTTGGAATTCGTACTCCTCTaGTCGGGGCCCATAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FLTFRTQGGRSQGFKSHLEFVLL*SGPIAA Trigger: GGCAGCTATGGGCCCCGACCAGAGGAGTACGAATTC...CAAATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | CATTTCTTGACCTTCAGGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATGGGGTGGCTTATAATTaGGCTTGCTGTCCAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: HFLTFRTQGGRSQGFKSHGVAYN*ACCPGR Trigger: ACGACCTGGACAGCAAGCTCAATTATAAGCCACCCC...ATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR GCA 90 bp | CATTTCTTGACCTTCAGGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATTCCTTGTCCATCTCCTaGAGCTCCTTCAAGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: HFLTFRTQGGRSQGFKSHSLSIS*SSFKDF Trigger: GAAGTCCTTGAAGGAGCTGCAGGAGATGGACAAGGA...ATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | AAACTTCTGAACAGAAGGCCAAGGAGGCGTCAGCCGGAGCTTGCCCATTTCTTGGTGTTTTCTTGTACTTaGTTAGACTCTCGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: KLLNRRPRRRQPELAHFLVFSCT*LDSRHP Trigger: AGGATGACGAGAGTCTAACCAAGTACAAGAAAACAC...CAAGAAATGGGCAAGCTCCGGCTGACGCCTCCTTGGCCTTCTGTTCAGAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | CATTTCTTGACCTTCAGGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATGTTTGTCGTCATCCGTaGAGAAGGACTTGTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: HFLTFRTQGGRSQGFKSHVCRHP*RRTCCG Trigger: ACCACAACAAGTCCTTCTTCACGGATGACGACAAAC...ATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCCTGAAGGTCAAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | GGCAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTCGCCTCTTCCAGCTGTaGCTGTGCATCCTTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: GKGKQMRFSVTHTTILFFRLFQL*LCILLR Trigger: ACGGAGAAGGATGCACAGCCACAGCTGGAAGAGGCG...AAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | CAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTTCGAATTCGTACTCCTCTaGTCGGGGCCCATAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QRKANEVLSHTHNDFILFEFVLL*SGPIAA Trigger: GGCAGCTATGGGCCCCGACCAGAGGAGTACGAATTC...GAAAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR TCA 90 bp | CAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTTCGTTTGTCGTCATCCGTaGAGAAGGACTTGTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QRKANEVLSHTHNDFILFVCRHP*RRTCCG Trigger: ACCACAACAAGTCCTTCTTCACGGATGACGACAAAC...GAAAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CCA 90 bp | CAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTTCGTGTTTTCTTGTACTTaGTTAGACTCTCGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKANEVLSHTHNDFILFVFSCT*LDSRHP Trigger: AGGATGACGAGAGTCTAACCAAGTACAAGAAAACAC...GAAAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS GCA 90 bp | GAGGGCCTCGAGATCGCCAGTAAGGTCCATGGTGATGGGTCCTGGTaGACTGTCACATACAAGGCTAAGCCGGGTAACAGTCACGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: EGLEIASKVHGDGSW*TVTYKAKPGNSHVG Trigger: CCCAACGTGACTGTTACCCGGCTTAGCCTTGTATGTGACAGTGCACCAGGACCCATCACCATGGACCTTACTGGCGATCTCGAGGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGAGACTCTCGTCATCCTaGTCCATCTCCTGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQRLSSS*SISCSS Trigger: GGAGCTGCAGGAGATGGACAAGGATGACGAGAGTCT...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS TCA 90 bp | TCTCCTGCAGCTCCTTCAAGGACTTCTGAGGGGGTGGCTTATAATTaGGCTTGCTGTCCAGGTCGTCGTCCGCCTCTTCCAGCTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SPAAPSRTSEGVAYN*ACCPGRRPPLPAVA Trigger: AGCCACAGCTGGAAGAGGCGGACGACGACCTGGACAGCAAGCTCAATTATAAGCCACCCCCTCAGAAGTCCTTGAAGGAGCTGCAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000154440.2 |
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| CDS CCA 90 bp | TTTGAGGGCCTCGAGATCGCCAGTAAGGTCCATGGTGATGGGTCCTaGTGCACTGTCACATACAAGGCTAAGCCGGGTAACAGTCACGTT | + |
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Preference number: 5 (lower is better) Translates to: FEGLEIASKVHGDGS*CTVTYKAKPGNSHV Trigger: AACGTGACTGTTACCCGGCTTAGCCTTGTATGTGACAGTGCACCAGGACCCATCACCATGGACCTTACTGGCGATCTCGAGGCCCTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGCCCAGCAGTGTTTTCTaGTACTTGGTTAGACTCTCG | + |
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Preference number: 5 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQPSSVF*YLVRLS Trigger: CGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGG...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | GGAACAGGGAGGGAGGAGGGAGTTTGTGATGATCAACATGGTCGGGAGAACTCTTCACGTTGGGAACTGTaGGGTCTGCTACCACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GTGREEGVCDDQHGRENSSRWEL*GLLPQG Trigger: TCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGA...AGAGTTCTCCCGACCATGTTGATCATCACAAACTCCCTCCTCCCTCCCTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | CCGGAAGAACCCAGTGGCAAGAATAAACTTCTGAACAGAAGGCCAAGGAGGCGTAGACTCTCGTCATCCTaGTCCATCTCCTGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PEEPSGKNKLLNRRPRRRRLSSS*SISCSS Trigger: GGAGCTGCAGGAGATGGACAAGGATGACGAGAGTCT...ACGCCTCCTTGGCCTTCTGTTCAGAAGTTTATTCTTGCCACTGGGTTCTTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCGGGAGAACTCTTCTGGTGGGTGAGGAAGGTGACAGGAGGGACGGACAGAGTGTTTTCTTGTACTaGGTTAGACTCTCGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: MVGRTLLVGEEGDRRDGQSVFLY*VRLSSS Trigger: GGATGACGAGAGTCTAACCAAGTACAAGAAAACACT...CTGTCCGTCCCTCCTGTCACCTTCCTCACCCACCAGAAGAGTTCTCCCGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | GGACTCAAGGTGGGAGAAGCCAGGGTTTTAAGTCTCATTTGCAGGGAACACTCTTCACGTTGGGAACTGTaGGGTCTGCTACCACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GLKVGEARVLSLICREHSSRWEL*GLLPQG Trigger: TCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGA...AGAGTGTTCCCTGCAAATGAGACTTAAAACCCTGGCTTCTCCCACCTTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS GCA 90 bp | TACAAGGCTAAGCCGGGTAACAGTCACGTTGGGAACTGTTGGGTCTaGTACCACAGGGACATCTCCCAGCAGTGTTTTCTTGTACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: YKAKPGNSHVGNCWV*YHRDISQQCFLVLG Trigger: ACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGACTGTTACCCGGCTTAGCCTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CCA 90 bp | GGTCTGCTACCACAGGGACATCTCCCAGCAGTGTTTTCTTGTACTTaGTTAGACTCTCGTCATCCTTGTCCATCTCCTGCAGCTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GLLPQGHLPAVFSCT*LDSRHPCPSPAAPS Trigger: TGAAGGAGCTGCAGGAGATGGACAAGGATGACGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CCA 90 bp | GTCACATACAAGGCTAAGCCGGGTAACAGTCACGTTGGGAACTGTTaGGTCTGCTACCACAGGGACATCTCCCAGCAGTGTTTTCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: VTYKAKPGNSHVGNC*VCYHRDISQQCFLV Trigger: TACAAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGACTGTTACCCGGCTTAGCCTTGTATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | AAGAATAAACTTCTGAACAGAAGGCCAAGGAGGCGTCAGCCGGAGCTTGCCCATAGTGTTTTCTTGTACTaGGTTAGACTCTCGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: KNKLLNRRPRRRQPELAHSVFLY*VRLSSS Trigger: GGATGACGAGAGTCTAACCAAGTACAAGAAAACACT...ATGGGCAAGCTCCGGCTGACGCCTCCTTGGCCTTCTGTTCAGAAGTTTATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGAAAGCAAATGAGGTTCTCAGTCACACACACAACGATTTTATTCTTTTCTCACGTTGGGAACTGTaGGGTCTGCTACCACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: QRKANEVLSHTHNDFILFSRWEL*GLLPQG Trigger: TCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGA...GAAAAGAATAAAATCGTTGTGTGTGTGACTGAGAACCTCATTTGCTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032344.12 ENSMUST00000111892.8 |
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| CDS TCA 90 bp | ATGAATGTGGCTTTATCCACTCTCATGCCAGTCCGGTATGTGTGTTaGACATACTTCAGGCCAGACACAATATCCTTATTCACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MNVALSTLMPVRYVC*TYFRPDTISLFTLK Trigger: CTTCAAAGTGAATAAGGATATTGTGTCTGGCCTGAAGTATGTTCAACACACATACCGGACTGGCATGAGAGTGGATAAAGCCACATTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000204934.2 |
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| CDS TCA 72 bp | GCTCCTTCAAGGACTTCTGAGGGGGTGGCTTATAATTaGGCTTGCTGTCCAGGTCGTCGTCCGCCTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: APSRTSEGVAYN*ACCPGRRPPLP Trigger: TGGAAGAGGCGGACGACGACCTGGACAGCAAGCTCAATTATAAGCCACCCCCTCAGAAGTCCTTGAAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000154440.2 |
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| CDS CCA 72 bp | AAGGCTAAGCCGGGTAACAGTCACGTTGGGAACTGTTaGGTCTGCTACCACAGGGACATCTCCCAGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: KAKPGNSHVGNC*VCYHRDISQQC Trigger: ACACTGCTGGGAGATGTCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGACTGTTACCCGGCTTAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CCA 72 bp | CTCGAGATCGCCAGTAAGGTCCATGGTGATGGGTCCTaGTGCACTGTCACATACAAGGCTAAGCCGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LEIASKVHGDGS*CTVTYKAKPGN Trigger: GTTACCCGGCTTAGCCTTGTATGTGACAGTGCACCAGGACCCATCACCATGGACCTTACTGGCGATCTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS GCA 72 bp | GAGATCGCCAGTAAGGTCCATGGTGATGGGTCCTGGTaGACTGTCACATACAAGGCTAAGCCGGGTAACAGT | + |
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Preference number: 6 (lower is better) Translates to: EIASKVHGDGSW*TVTYKAKPGNS Trigger: ACTGTTACCCGGCTTAGCCTTGTATGTGACAGTGCACCAGGACCCATCACCATGGACCTTACTGGCGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS GCA 72 bp | AAGCCGGGTAACAGTCACGTTGGGAACTGTTGGGTCTaGTACCACAGGGACATCTCCCAGCAGTGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KPGNSHVGNCWV*YHRDISQQCFL Trigger: AAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGACCCAACAGTTCCCAACGTGACTGTTACCCGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CAA 90 bp | GGGTCTGCTACCACAGGGACATCTCCCAGCAGTGTTTTCTTGTACTaGGTTAGACTCTCGTCATCCTTGTCCATCTCCTGCAGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSATTGTSPSSVFLY*VRLSSSLSISCSSF Trigger: GAAGGAGCTGCAGGAGATGGACAAGGATGACGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CAA 90 bp | ACTGTTGGGTCTGCTACCACAGGGACATCTCCCAGCAGTGTTTTCTaGTACTTGGTTAGACTCTCGTCATCCTTGTCCATCTCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TVGSATTGTSPSSVF*YLVRLSSSLSISCS Trigger: GCTGCAGGAGATGGACAAGGATGACGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGACCCAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CCA 72 bp | TCCTTCTTAATGGCCAGGTTCCATTCCCAGGTGAGGTaGTCCTGTTTGTCGTCATCCGTGAAGAAGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: SFLMARFHSQVR*SCLSSSVKKDL Trigger: CAAGTCCTTCTTCACGGATGACGACAAACAGGACCACCTCACCTGGGAATGGAACCTGGCCATTAAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CCA 72 bp | CCACAGGGACATCTCCCAGCAGTGTTTTCTTGTACTTaGTTAGACTCTCGTCATCCTTGTCCATCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PQGHLPAVFSCT*LDSRHPCPSPA Trigger: TGCAGGAGATGGACAAGGATGACGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CAA 72 bp | ACCACAGGGACATCTCCCAGCAGTGTTTTCTTGTACTaGGTTAGACTCTCGTCATCCTTGTCCATCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TTGTSPSSVFLY*VRLSSSLSISC Trigger: GCAGGAGATGGACAAGGATGACGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CAA 72 bp | TCTGCTACCACAGGGACATCTCCCAGCAGTGTTTTCTaGTACTTGGTTAGACTCTCGTCATCCTTGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SATTGTSPSSVF*YLVRLSSSLSI Trigger: GATGGACAAGGATGACGAGAGTCTAACCAAGTACAAGAAAACACTGCTGGGAGATGTCCCTGTGGTAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS CAA 90 bp | TTCACCCTGTATTCAATGCCTTCCTTTAGCACAAATGTATCCTTTTaGAGGGCCTCGAGATCGCCAGTAAGGTCCATGGTGATGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FTLYSMPSFSTNVSF*RASRSPVRSMVMGP Trigger: AGGACCCATCACCATGGACCTTACTGGCGATCTCGAGGCCCTCAAAAAGGATACATTTGTGCTAAAGGAAGGCATTGAATACAGGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 |
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| CDS TCA 72 bp | GCTTTATCCACTCTCATGCCAGTCCGGTATGTGTGTTaGACATACTTCAGGCCAGACACAATATCCTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: ALSTLMPVRYVC*TYFRPDTISLF Trigger: GAATAAGGATATTGTGTCTGGCCTGAAGTATGTTCAACACACATACCGGACTGGCATGAGAGTGGATAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000204934.2 |
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| CDS CAA 72 bp | GGCTTTATCCACTCTCATGCCAGTCCGGTATGTGTGTaGAACATACTTCAGGCCAGACACAATATCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: GFIHSHASPVCV*NILQARHNILI Trigger: AATAAGGATATTGTGTCTGGCCTGAAGTATGTTCAACACACATACCGGACTGGCATGAGAGTGGATAAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000204934.2 |
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| CDS CAA 90 bp | CATGAATGTGGCTTTATCCACTCTCATGCCAGTCCGGTATGTGTGTaGAACATACTTCAGGCCAGACACAATATCCTTATTCACTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HECGFIHSHASPVCV*NILQARHNILIHFE Trigger: TTCAAAGTGAATAAGGATATTGTGTCTGGCCTGAAGTATGTTCAACACACATACCGGACTGGCATGAGAGTGGATAAAGCCACATTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000204934.2 |
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| CDS CAA 72 bp | ACATACTTCAGGCCAGACACAATATCCTTATTCACTTaGAAGTTAATTTTCACCCTGTATTCAATGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TYFRPDTISLFT*KLIFTLYSMPS Trigger: GGAAGGCATTGAATACAGGGTGAAAATTAACTTCAAAGTGAATAAGGATATTGTGTCTGGCCTGAAGTATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032344.12 ENSMUST00000111891.4 ENSMUST00000111892.8 ENSMUST00000204934.2 |
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