Pregenerated sensors for ARHGDIA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025132Ensembl transcript IDs: ENSMUST00000067936.6, ENSMUST00000106197.10
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCAGGCTCGCAGGAAGCAACAGCAGCGCACCCCAGGCCTCCCTTaGGTGGGTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: GQARRKQQQRTPGLP*VGHWDGDGRRGEDR Trigger: CCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGCTGTTGCTTCCTGCGAGCCTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | AGGCTCGCAGGAAGCAACAGCAGCGCACCCCAGGCCTCCCTTGGGTaGGTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RLAGSNSSAPQASLG*VTGMGMADEARTGR Trigger: TCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGCTGTTGCTTCCTGCGAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | TCCCACATTTGTCCTGGCTGGGTCCAGGGAGGGTCGGCCCAGGGATaGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: SHICPGWVQGGSAQG*WHQEPGQRHQASWP Trigger: GGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGGACCCAGCCAGGACAAATGTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | GCAGCGCACCCCAGGCCTCCCTTGGGTGGGTCACTGGGATGGGGATaGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: AAHPRPPLGGSLGWG*QTRRGQGEHMLMQT Trigger: TGTCTGCATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | CACATTTGTCCTGGCTGGGTCCAGGGAGGGTCGGCCCAGGGATGGTaGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: HICPGWVQGGSAQGW*HQEPGQRHQASWPK Trigger: TTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGGACCCAGCCAGGACAAATGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | GAGGTCCTGTCAGCACTTTGGTTTGGGGTAGGTAGGGGGTTAGGGTaGGGCATGTCGGTCCTTCTGTCTGTCCGTCGCCCTGCCCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: EVLSALWFGVGRGLG*GMSVLLSVRRPARL Trigger: GAGACGGGCAGGGCGACGGACAGACAGAAGGACCGACATGCCCCACCCTAACCCCCTACCTACCCCAAACCAAAGTGCTGACAGGACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | GAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTaGGGACAGGGGCTCCGAGTACTGCCTACAAGGGACAGAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ETSKARLALSLRGSL*GQGLRVLPTRDREG Trigger: GCCTTCTCTGTCCCTTGTAGGCAGTACTCGGAGCCCCTGTCCCCACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | CAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTaGCTGGGTCCAGGGAGGGTCGGCCCAGGGATGGTGGCACCAAGA | + |
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Preference number: 1 (lower is better) Translates to: QETAPNCVNLVPHLS*LGPGRVGPGMVAPR Trigger: TCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGGACCCAGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 90 bp | GACAGAGAAGGCAGAGGAATGAGGCACCCTACCCTGCCTCCTAGATaGGGCTGGAGGCATCGAGTTTTGGCAATTGACCCTCCCCTAGCT | + |
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Preference number: 1 (lower is better) Translates to: DREGRGMRHPTLPPR*GWRHRVLAIDPPLA Trigger: AGCTAGGGGAGGGTCAATTGCCAAAACTCGATGCCTCCAGCCCCATCTAGGAGGCAGGGTAGGGTGCCTCATTCCTCTGCCTTCTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CAA 90 bp | TGGCCAGGCTCGCAGGAAGCAACAGCAGCGCACCCCAGGCCTCCCTaGGGTGGGTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: WPGSQEATAAHPRPP*GGSLGWGWQTRRGQ Trigger: CTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGCTGTTGCTTCCTGCGAGCCTGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGAGGGTCGGCCCAGGGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGGGAGGGGAAGAGCTaGCCAGGCTCGCAGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PGRVGPGMVAPRTRAEASGEGKS*PGSQEA Trigger: TGCTTCCTGCGAGCCTGGCCAGCTCTTCCCCTCCCC...TGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGAGGGTCGGCCCAGGGATGGTGGCACCAAGAACCAGGGCAGAGGCATCATCACTGGGATGGGGATaGCAGACGAGGCGAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: PGRVGPGMVAPRTRAEASSLGWG*QTRRGQ Trigger: CTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGA...TGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR TCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGGGGAGGAATGACGGGTaGGGGAGGTCCTGTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GWWHQEPGQRHQASWPKWGRNDG*GRSCQH Trigger: GTGCTGACAGGACCTCCCTCACCCGTCATTCCTCCC...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTGGGCCCTCCCCTAGCTACTaGAGCCACCCCCAACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QVRQVRLGWLCPSGALCGPSPSY*SHPQPW Trigger: CCAGGGTTGGGGGTGGCTCCAGTAGCTAGGGGAGGG...CCCACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGCTCAGGGGCTCTCTGTaGGGACAGGGGCTCCGAGTA | + |
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Preference number: 2 (lower is better) Translates to: GWWHQEPGQRHQASWPKWLRGSL*GQGLRV Trigger: TACTCGGAGCCCCTGTCCCCACAGAGAGCCCCTGAG...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CAA 90 bp | GAGGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTaGTCCTGGCTGGGTCCAGGGAGGGTCGGCCCAGGGATGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: EAQETAPNCVNLVPH*SWLGPGRVGPGMVA Trigger: TGCCACCATCCCTGGGCCGACCCTCCCTGGACCCAGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR TCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGGAGAAGGCAGAGGAATaGGGCACCCTACCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GWWHQEPGQRHQASWPKWEKAEE*GTLPCL Trigger: GAGGCAGGGTAGGGTGCCTCATTCCTCTGCCTTCTC...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGAGGCAATATTGGAGGCCTGGGCTaGAACCCCTCCCCCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GTKNQGRGIRPAGPNGGNIGGLG*NPSPTA Trigger: TGCAGTGGGGGAGGGGTTCCAGCCCAGGCCTCCAAT...ATTGCCTCCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATAGCAGATTGGAGGCCTaGGCTGGAACCCCTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VTGMGMADEARTGRAHAHSRLEA*AGTPPP Trigger: TGGGGGAGGGGTTCCAGCCCAGGCCTCCAATCTGCT...ATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATGCAGACAGGGACACAGCAGATTaGAGGCCTGGGCTGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: GMGMADEARTGRAHAHADRDTAD*RPGLEP Trigger: GGGTTCCAGCCCAGGCCTCCAATCTGCTGTGTCCCT...GTCTGCATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGCCTTGGGTGGGTCACTaGGATGGGGATGGCAGACGA | + |
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Preference number: 2 (lower is better) Translates to: GWWHQEPGQRHQASWPKWPWVGH*DGDGRR Trigger: TCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGG...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATAGCCCTTCCCCATGCTaGGACAGAGACAAGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VTGMGMADEARTGRAHAHSPSPC*DRDKVG Trigger: GCCCACCTTGTCTCTGTCGCAGCATGGGGAAGGGCT...ATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTGGGAGCCCTTCCCCATGCTaGGACAGAGACAAGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QVRQVRLGWLCPSGALCGSPSPC*DRDKVG Trigger: GCCCACCTTGTCTCTGTCGCAGCATGGGGAAGGGCT...CCCACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR TCA 90 bp | GCACATGCTCATGCAGACAGGGAGTTAAGAGTTAGCGACGGCCCCCAGCACACGTGGACTAGGGAGGAATaGCGGGTGAGGGAGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AHAHADRELRVSDGPQHTWTREE*RVREVL Trigger: CAGGACCTCCCTCACCCGTCATTCCTCCCTAGTCCA...CGTGTGCTGGGGGCCGTCGCTAACTCTTAACTCCCTGTCTGCATGAGCATGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGGTCCTGTCAGCACTTTaGTTTGGGGTAGGTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GWWHQEPGQRHQASWPKWVLSAL*FGVGRG Trigger: CCCCCTACCTACCCCAAACCAAAGTGCTGACAGGAC...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATGCAGACGTCCTGTCAGCACTTTaGTTTGGGGTAGGTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GMGMADEARTGRAHAHADVLSAL*FGVGRG Trigger: CCCCCTACCTACCCCAAACCAAAGTGCTGACAGGAC...GTCTGCATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | CAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGCCACGTGGCACCCCAGGCCTCCCTTaGGTGGGTCACTGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: QMEAINTDRPGTRFRPRGTPGLP*VGHWDG Trigger: CCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGT...GCCACGTGGCCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTACCCTGCCTCCTAGATaGGGCTGGAGGCATCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: AQVRQVRLGWLCPSGALCTLPPR*GWRHRV Trigger: AACTCGATGCCTCCAGCCCCATCTAGGAGGCAGGGT...ACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGCTGGGAGGAATGACGGGTaGGGGAGGTCCTGTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GTGDSSQLCELGPTFVLAGRNDG*GRSCQH Trigger: GTGCTGACAGGACCTCCCTCACCCGTCATTCCTCCC...AGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGGGCTGGACAACCCTGACAGTGTTCTGTTCCATTCTAGAAGCCAGGGCCATTGGAGGCCTGGGCTaGAACCCCTCCCCCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: KVGWTTLTVFCSILEARAIGGLG*NPSPTA Trigger: TGCAGTGGGGGAGGGGTTCCAGCCCAGGCCTCCAAT...GGCCCTGGCTTCTAGAATGGAACAGAACACTGTCAGGGTTGTCCAGCCCACCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGTGGACTAGGGAGGAATaGCGGGTGAGGGAGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: EAQETAPNCVNLVPHLSWWTREE*RVREVL Trigger: CAGGACCTCCCTCACCCGTCATTCCTCCCTAGTCCA...CCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGCCCAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGGGCAGACAGGAGAGCTaGCTGCCTGAGTGGACTAGG | + |
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Preference number: 2 (lower is better) Translates to: QLAQMEAINTDRPGTRFRGRQES*LPEWTR Trigger: CCTAGTCCACTCAGGCAGTCAGCTCTCCTGTCTGCC...CCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTGGGCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR GCA 90 bp | GGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGAGGCAATGACAGGGAGAGCACATaGTCATGCAGACAGGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: GTKNQGRGIRPAGPNGGNDREST*SCRQGV Trigger: AACTCCCTGTCTGCATGAGCATGTGCTCTCCCTGTC...ATTGCCTCCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATAAGACAGAGGGAACCTaGAGGGACACAGCAGATTGG | + |
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Preference number: 2 (lower is better) Translates to: VTGMGMADEARTGRAHAHKTEGT*RDTADW Trigger: CCAATCTGCTGTGTCCCTCCAGGTTCCCTCTGTCTT...ATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGCCCAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGAGGGGCTCCGAGTACTaGCTACAAGGGACAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QLAQMEAINTDRPGTRFRRGSEY*LQGTEK Trigger: CTTCTCTGTCCCTTGTAGGCAGTACTCGGAGCCCCT...CCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTGGGCCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGCCCAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGAAGACAGAGGGAACCTaGAGGGACACAGCAGATTGG | + |
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Preference number: 2 (lower is better) Translates to: QLAQMEAINTDRPGTRFRKTEGT*RDTADW Trigger: CCAATCTGCTGTGTCCCTCCAGGTTCCCTCTGTCTT...CCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTGGGCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGAGAGACAAGGTGGGCTaGACAACCCTGACAGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: EAQETAPNCVNLVPHLSWRDKVG*TTLTVF Trigger: GAACACTGTCAGGGTTGTCCAGCCCACCTTGTCTCT...CCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR-3UTR GCA 90 bp | CAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGCCACGTGGCGAGAGCACATGCTCATaGAGACAGGGAGTTAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QMEAINTDRPGTRFRPRGESTCS*RQGVKS Trigger: ACTCTTAACTCCCTGTCTGCATGAGCATGTGCTCTC...GCCACGTGGCCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 72 bp | CAGCAGCGCACCCCAGGCCTCCCTTGGGTGGGTCACTaGGATGGGGATGGCAGACGAGGCGAGGACAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QQRTPGLPWVGH*DGDGRRGEDRE Trigger: CTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 72 bp | CCTGGCTGGGTCCAGGGAGGGTCGGCCCAGGGATGGTaGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PGWVQGGSAQGW*HQEPGQRHQAS Trigger: GCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGGACCCAGCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 72 bp | GGAAGCAACAGCAGCGCACCCCAGGCCTCCCTTGGGTaGGTCACTGGGATGGGGATGGCAGACGAGGCGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSNSSAPQASLG*VTGMGMADEAR Trigger: CCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGCTGTTGCTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 72 bp | CGCAGGAAGCAACAGCAGCGCACCCCAGGCCTCCCTTaGGTGGGTCACTGGGATGGGGATGGCAGACGAGGC | + |
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Preference number: 3 (lower is better) Translates to: RRKQQQRTPGLP*VGHWDGDGRRG Trigger: GCCTCGTCTGCCATCCCCATCCCAGTGACCCACCCAAGGGAGGCCTGGGGTGCGCTGCTGTTGCTTCCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 72 bp | AAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTaGGGACAGGGGCTCCGAGTACTGCCTACAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: KARLALSLRGSL*GQGLRVLPTRD Trigger: GTCCCTTGTAGGCAGTACTCGGAGCCCCTGTCCCCACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR CCA 72 bp | GCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTaGCTGGGTCCAGGGAGGGTCGGCCCAGGGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: APNCVNLVPHLS*LGPGRVGPGMV Trigger: CACCATCCCTGGGCCGACCCTCCCTGGACCCAGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR TCA 72 bp | ATCAGGCCAGCTGGCCCAAATGGAGGCAATAAATACTaGCAGGCCAGGCACGAGGTTCAGGCCACGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: IRPAGPNGGNKY*QARHEVQATWP Trigger: GGGCCACGTGGCCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTGGGCCAGCTGGCCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| 3UTR TCA 72 bp | AGGGAGGGGAGGCACAGGAGACAGCTCCCAACTGTGTaGACTTGGTCCCACATTTGTCCTGGCTGGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: REGRHRRQLPTV*TWSHICPGWVQ Trigger: CTGGACCCAGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTCCCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| 3UTR CCA 72 bp | GGCAGAGGAATGAGGCACCCTACCCTGCCTCCTAGATaGGGCTGGAGGCATCGAGTTTTGGCAATTGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRGMRHPTLPPR*GWRHRVLAIDP Trigger: AGGGTCAATTGCCAAAACTCGATGCCTCCAGCCCCATCTAGGAGGCAGGGTAGGGTGCCTCATTCCTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| 3UTR CCA 72 bp | AGCCCTTCCCCATGCTGCGACAGAGACAAGGTGGGCTaGACAACCCTGACAGTGTTCTGTTCCATTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPSPCCDRDKVG*TTLTVFCSILE Trigger: TTCTAGAATGGAACAGAACACTGTCAGGGTTGTCCAGCCCACCTTGTCTCTGTCGCAGCATGGGGAAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGGGGGACGTTGGGGTCTaGAGAGACAGCTACTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWWHQEPGQRHQASWPKWGDVGV*RDSYSA Trigger: GGCCGAGTAGCTGTCTCTGCAGACCCCAACGTCCCC...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTGGGGACGTTGGGGTCTaGAGAGACAGCTACTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQVRQVRLGWLCPSGALCGDVGV*RDSYSA Trigger: GGCCGAGTAGCTGTCTCTGCAGACCCCAACGTCCCC...ACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGGAGGGCCTGGGGCAGTaGTGCATACCAAGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWWHQEPGQRHQASWPKWEGLGQ*CIPRSV Trigger: GACTGACCTTGGTATGCAGCACTGCCCCAGGCCCTC...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | CAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTGGGTGCCCCGAGCAAGCATaGCTTTGGGAGCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVRQVRLGWLCPSGALCGCPEQA*LWEPPP Trigger: TGGAGGAGGCTCCCAAAGGCATGCTTGCTCGGGGCA...CCCACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | GGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATGCAGACGAGCAAGCATGCCTTTaGGAGCCTCCTCCATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GMGMADEARTGRAHAHADEQACL*EPPPWV Trigger: CACCCATGGAGGAGGCTCCCAAAGGCATGCTTGCTC...GTCTGCATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| 3UTR CAA 72 bp | GGGGAGGCACAGGAGACAGCTCCCAACTGTGTGAACTaGGTCCCACATTTGTCCTGGCTGGGTCCAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEAQETAPNCVN*VPHLSWLGPGR Trigger: CCTCCCTGGACCCAGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | AGGGGGTTAGGGTGGGGCATGTCGGTCCTTCTGTCTGTCCGTCGCCCTGCCCGTTCCTTGTCCAGTTCCTaGATCTCCTGGATGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGWGMSVLLSVRRPARSLSSS*ISWMLF Trigger: GAAGAGCATCCAGGAGATCCAGGAACTGGACAAGGA...ACGGGCAGGGCGACGGACAGACAGAAGGACCGACATGCCCCACCCTAACCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| 3UTR CAA 72 bp | ACCCTGCCTCCTAGATGGGGCTGGAGGCATCGAGTTTaGGCAATTGACCCTCCCCTAGCTACTGGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLPPRWGWRHRV*AIDPPLATGAT Trigger: GGTGGCTCCAGTAGCTAGGGGAGGGTCAATTGCCAAAACTCGATGCCTCCAGCCCCATCTAGGAGGCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | GGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATGCAGACAGTTCCTGGATCTCCTaGATGCTCTTCTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMGMADEARTGRAHAHADSSWIS*MLFWAG Trigger: TCCAGCCCAGAAGAGCATCCAGGAGATCCAGGAACT...GTCTGCATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | GGGTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATCTTCCTCATTCTCTaGAGCTATCTGCGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLGWGWQTRRGQGEHMLIFLIL*SYLRKL Trigger: CAGCTTGCGCAGATAGCTGCAGAGAATGAGGAAGAT...GAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGCCCAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGTGCCCCGAGCAAGCATaGCTTTGGGAGCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLAQMEAINTDRPGTRFRCPEQA*LWEPPP Trigger: TGGAGGAGGCTCCCAAAGGCATGCTTGCTCGGGGCA...CCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTGGGCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTGATGCTCTTCTGGGCTaGAGGCTTGTAGTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQVRQVRLGWLCPSGALCDALLG*RLVVHR Trigger: TCTGTGAACTACAAGCCTCCAGCCCAGAAGAGCATC...ACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | GCACATGCTCATGCAGACAGGGAGTTAAGAGTTAGCGACGGCCCCCAGCACACGAGTTCCTGGATCTCCTaGATGCTCTTCTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHAHADRELRVSDGPQHTSSWIS*MLFWAG Trigger: TCCAGCCCAGAAGAGCATCCAGGAGATCCAGGAACT...CGTGTGCTGGGGGCCGTCGCTAACTCTTAACTCCCTGTCTGCATGAGCATGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGCTGAGCAAGCATGCCTTTaGGAGCCTCCTCCATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTGDSSQLCELGPTFVLAEQACL*EPPPWV Trigger: CACCCATGGAGGAGGCTCCCAAAGGCATGCTTGCTC...AGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | GTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATTTCCTGTATGTGTGTTaGATGTACTTCATGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTGMGMADEARTGRAHAHFLYVC*MYFMPD Trigger: GTCCGGCATGAAGTACATCCAACACACATACAGGAA...ATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGCCCAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGTCCTTGTCCAGTTCCTaGATCTCCTGGATGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLAQMEAINTDRPGTRFRSLSSS*ISWMLF Trigger: GAAGAGCATCCAGGAGATCCAGGAACTGGACAAGGA...CCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTGGGCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR GCA 90 bp | GAGGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGATCTTCCTCATTCTCTaGAGCTATCTGCGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAQETAPNCVNLVPHLSWIFLIL*SYLRKL Trigger: CAGCTTGCGCAGATAGCTGCAGAGAATGAGGAAGAT...CCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAGGGTCGGCCCAGGGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAATGACATTGGGGACGTaGGGGTCTGCAGAGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRVGPGMVAPRTRAEASMTLGT*GSAETA Trigger: AGCTGTCTCTGCAGACCCCAACGTCCCCAATGTCAT...TGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCCCTGGGCCGACCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GGGTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCCGAGTCACAATGACATaGGGGACGTTGGGGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLGWGWQTRRGQGEHMLRVTMT*GTLGSA Trigger: TGCAGACCCCAACGTCCCCAATGTCATTGTGACTCG...GAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGAGGCAATCGAGCAAGCATGCCTTaGGGAGCCTCCTCCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTKNQGRGIRPAGPNGGNRASMP*GASSMG Trigger: ACCCATGGAGGAGGCTCCCAAAGGCATGCTTGCTCG...ATTGCCTCCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GTAGGTAGGGGGTTAGGGTGGGGCATGTCGGTCCTTCTGTCTGTCCGTCGCCCTAGGCTTTCATCGTCCTaGTCCAGTTCCTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGRGLGWGMSVLLSVRRPRLSSS*SSSWIS Trigger: GGAGATCCAGGAACTGGACAAGGACGATGAAAGCCT...AGGGCGACGGACAGACAGAAGGACCGACATGCCCCACCCTAACCCCCTACCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGTGGCACCAAGAACCAGGGCAGAGGCATCAGGCCAGCTGGCCCAAATGGAGGCTTTCATCGTCCTaGTCCAGTTCCTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWWHQEPGQRHQASWPKWRLSSS*SSSWIS Trigger: GGAGATCCAGGAACTGGACAAGGACGATGAAAGCCT...CCATTTGGGCCAGCTGGCCTGATGCCTCTGCCCTGGTTCTTGGTGCCACCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | AGGGGGTTAGGGTGGGGCATGTCGGTCCTTCTGTCTGTCCGTCGCCCTGCCCGTTTTCCTGTATGTGTGTaGGATGTACTTCATGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLGWGMSVLLSVRRPARFPVCV*DVLHAG Trigger: TCCGGCATGAAGTACATCCAACACACATACAGGAAA...ACGGGCAGGGCGACGGACAGACAGAAGGACCGACATGCCCCACCCTAACCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | CAAATGGAGGCAATAAATACTGACAGGCCAGGCACGAGGTTCAGGCCACGTGGCCGAGCAAGCATGCCTTaGGGAGCCTCCTCCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QMEAINTDRPGTRFRPRGRASMP*GASSMG Trigger: ACCCATGGAGGAGGCTCCCAAAGGCATGCTTGCTCG...GCCACGTGGCCTGAACCTCGTGCCTGGCCTGTCAGTATTTATTGCCTCCATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GTAGGTAGGGGGTTAGGGTGGGGCATGTCGGTCCTTCTGTCTGTCCGTCGCCCTTCCTTCCACTCCTTTTaGATGGTGAGATTCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGRGLGWGMSVLLSVRRPSFHSF*MVRFHS Trigger: GGAGTGGAATCTCACCATCAAAAAGGAGTGGAAGGA...AGGGCGACGGACAGACAGAAGGACCGACATGCCCCACCCTAACCCCCTACCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGCTATGACATTGGGGACGTaGGGGTCTGCAGAGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTGDSSQLCELGPTFVLAMTLGT*GSAETA Trigger: AGCTGTCTCTGCAGACCCCAACGTCCCCAATGTCAT...AGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGCTGACAGGTGGTCAGTCTaGTCGTCATCTGTGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGDSSQLCELGPTFVLADRWSV*SSSVKR Trigger: GCGCTTCACAGATGACGACAAGACTGACCACCTGTC...AGCCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCTGGACAACCCTGACAGTGTTCTGTTCCATTCTAGAAGCCAGGGCCGACAGGTGGTCAGTCTaGTCGTCATCTGTGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KVGWTTLTVFCSILEARADRWSV*SSSVKR Trigger: GCGCTTCACAGATGACGACAAGACTGACCACCTGTC...GGCCCTGGCTTCTAGAATGGAACAGAACACTGTCAGGGTTGTCCAGCCCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GTCACTGGGATGGGGATGGCAGACGAGGCGAGGACAGGGAGAGCACATGCTCATTCCTTCCACTCCTTTTaGATGGTGAGATTCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTGMGMADEARTGRAHAHSFHSF*MVRFHS Trigger: GGAGTGGAATCTCACCATCAAAAAGGAGTGGAAGGA...ATGAGCATGTGCTCTCCCTGTCCTCGCCTCGTCTGCCATCCCCATCCCAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS GCA 90 bp | GGCTGGAGGCTTGTAGTTCACAGAGTGCTCATCTTCCTCATTCTCTaGAGCTATCTGCGCAAGCTGCTCAGCAGTGGGTTCCTGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GWRLVVHRVLIFLIL*SYLRKLLSSGFLFC Trigger: GCAGAACAGGAACCCACTGCTGAGCAGCTTGCGCAGATAGCTGCAGAGAATGAGGAAGATGAGCACTCTGTGAACTACAAGCCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGTGAGACAAGTAAGGCTCGGCTGGCTTTGTCCCTCAGGGGCTCTCTGTTTTCCTGTATGTGTGTaGGATGTACTTCATGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQVRQVRLGWLCPSGALCFPVCV*DVLHAG Trigger: TCCGGCATGAAGTACATCCAACACACATACAGGAAA...ACAGAGAGCCCCTGAGGGACAAAGCCAGCCGAGCCTTACTTGTCTCACCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS CCA 90 bp | ATCGTCCTTGTCCAGTTCCTGGATCTCCTGGATGCTCTTCTGGGCTaGAGGCTTGTAGTTCACAGAGTGCTCATCTTCCTCATTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVLVQFLDLLDALLG*RLVVHRVLIFLILC Trigger: GCAGAGAATGAGGAAGATGAGCACTCTGTGAACTACAAGCCTCCAGCCCAGAAGAGCATCCAGGAGATCCAGGAACTGGACAAGGACGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGACAAACGACTGTTTCTaGAAGCTCTCCAGATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: EAQETAPNCVNLVPHLSWTNDCF*KLSRSP Trigger: AGGTGATCTGGAGAGCTTCAAGAAACAGTCGTTTGT...CCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCTGGACAACCCTGACAGTGTTCTGTTCCATTCTAGAAGCCAGGGCCACAAACGACTGTTTCTaGAAGCTCTCCAGATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KVGWTTLTVFCSILEARATNDCF*KLSRSP Trigger: AGGTGATCTGGAGAGCTTCAAGAAACAGTCGTTTGT...GGCCCTGGCTTCTAGAATGGAACAGAACACTGTCAGGGTTGTCCAGCCCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCACAGGAGACAGCTCCCAACTGTGTGAACTTGGTCCCACATTTGTCCTGGTCAGTCTTGTCAATTTaGACCCCTTTCCTGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: EAQETAPNCVNLVPHLSWSVLSI*TPFLYV Trigger: CACATACAGGAAAGGGGTCAAAATTGACAAGACTGA...CCAGGACAAATGTGGGACCAAGTTCACACAGTTGGGAGCTGTCTCCTGTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCTGGACAACCCTGACAGTGTTCTGTTCCATTCTAGAAGCCAGGGCCTCAGTCTTGTCAATTTaGACCCCTTTCCTGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVGWTTLTVFCSILEARASVLSI*TPFLYV Trigger: CACATACAGGAAAGGGGTCAAAATTGACAAGACTGA...GGCCCTGGCTTCTAGAATGGAACAGAACACTGTCAGGGTTGTCCAGCCCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS CAA 90 bp | CGGCCCAGCAGGGCCTCCTTGTACTTTCGGAGGCTTTCATCGTCCTaGTCCAGTTCCTGGATCTCCTGGATGCTCTTCTGGGCTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPSRASLYFRRLSSS*SSSWISWMLFWAGG Trigger: GCCTCCAGCCCAGAAGAGCATCCAGGAGATCCAGGAACTGGACAAGGACGATGAAAGCCTCCGAAAGTACAAGGAGGCCCTGCTGGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS CAA 90 bp | GTGCTGCATACCAAGGTCAGTCGAGTCACAATGACATTGGGGACGTaGGGGTCTGCAGAGACAGCTACTCGGCCCAGCAGGGCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLHTKVSRVTMTLGT*GSAETATRPSRASL Trigger: CAAGGAGGCCCTGCTGGGCCGAGTAGCTGTCTCTGCAGACCCCAACGTCCCCAATGTCATTGTGACTCGACTGACCTTGGTATGCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS CAA 90 bp | ACGTTGGGGTCTGCAGAGACAGCTACTCGGCCCAGCAGGGCCTCCTaGTACTTTCGGAGGCTTTCATCGTCCTTGTCCAGTTCCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TLGSAETATRPSRAS*YFRRLSSSLSSSWI Trigger: GATCCAGGAACTGGACAAGGACGATGAAAGCCTCCGAAAGTACAAGGAGGCCCTGCTGGGCCGAGTAGCTGTCTCTGCAGACCCCAACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS CAA 72 bp | TCTGCAGAGACAGCTACTCGGCCCAGCAGGGCCTCCTaGTACTTTCGGAGGCTTTCATCGTCCTTGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAETATRPSRAS*YFRRLSSSLSS Trigger: ACTGGACAAGGACGATGAAAGCCTCCGAAAGTACAAGGAGGCCCTGCTGGGCCGAGTAGCTGTCTCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS TCA 72 bp | GGGCAGTGCTGCATACCAAGGTCAGTCGAGTCACAATaGCATTGGGGACGTTGGGGTCTGCAGAGACAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GQCCIPRSVESQ*HWGRWGLQRQL Trigger: TAGCTGTCTCTGCAGACCCCAACGTCCCCAATGTCATTGTGACTCGACTGACCTTGGTATGCAGCACTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
||
| CDS CAA 72 bp | GTGCTGCATACCAAGGTCAGTCGAGTCACAATGACATaGGGGACGTTGGGGTCTGCAGAGACAGCTACTCGG | + |
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Preference number: 6 (lower is better) Translates to: VLHTKVSRVTMT*GTLGSAETATR Trigger: CCGAGTAGCTGTCTCTGCAGACCCCAACGTCCCCAATGTCATTGTGACTCGACTGACCTTGGTATGCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS CCA 72 bp | GTCCAGTTCCTGGATCTCCTGGATGCTCTTCTGGGCTaGAGGCTTGTAGTTCACAGAGTGCTCATCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VQFLDLLDALLG*RLVVHRVLIFL Trigger: GAGGAAGATGAGCACTCTGTGAACTACAAGCCTCCAGCCCAGAAGAGCATCCAGGAGATCCAGGAACTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS CAA 72 bp | AGGGCCTCCTTGTACTTTCGGAGGCTTTCATCGTCCTaGTCCAGTTCCTGGATCTCCTGGATGCTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RASLYFRRLSSS*SSSWISWMLFW Trigger: CCAGAAGAGCATCCAGGAGATCCAGGAACTGGACAAGGACGATGAAAGCCTCCGAAAGTACAAGGAGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS GCA 72 bp | CTTGTAGTTCACAGAGTGCTCATCTTCCTCATTCTCTaGAGCTATCTGCGCAAGCTGCTCAGCAGTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LVVHRVLIFLIL*SYLRKLLSSGF Trigger: GAACCCACTGCTGAGCAGCTTGCGCAGATAGCTGCAGAGAATGAGGAAGATGAGCACTCTGTGAACTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS CAA 72 bp | TACTCCACACCTTCCTTCAAGACAAACGACTGTTTCTaGAAGCTCTCCAGATCACCTGTCAGGTCCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: YSTPSFKTNDCF*KLSRSPVRSSS Trigger: GGAACTGGACCTGACAGGTGATCTGGAGAGCTTCAAGAAACAGTCGTTTGTCTTGAAGGAAGGTGTGGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS CAA 90 bp | CATGTAGTCAGTCTTGTCAATTTTGACCCCTTTCCTGTATGTGTGTaGGATGTACTTCATGCCGGACACGATCTCTCTGTTCACCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: HVVSLVNFDPFPVCV*DVLHAGHDLSVHPE Trigger: TTCCGGGTGAACAGAGAGATCGTGTCCGGCATGAAGTACATCCAACACACATACAGGAAAGGGGTCAAAATTGACAAGACTGACTACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS CCA 72 bp | GTCTTGTCAATTTTGACCCCTTTCCTGTATGTGTGTTaGATGTACTTCATGCCGGACACGATCTCTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VLSILTPFLYVC*MYFMPDTISLF Trigger: GAACAGAGAGATCGTGTCCGGCATGAAGTACATCCAACACACATACAGGAAAGGGGTCAAAATTGACAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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| CDS CAA 72 bp | AGTCTTGTCAATTTTGACCCCTTTCCTGTATGTGTGTaGGATGTACTTCATGCCGGACACGATCTCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SLVNFDPFPVCV*DVLHAGHDLSV Trigger: AACAGAGAGATCGTGTCCGGCATGAAGTACATCCAACACACATACAGGAAAGGGGTCAAAATTGACAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067936.6 ENSMUST00000106197.10 |
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