Pregenerated sensors for ARHGAP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035133Ensembl transcript IDs: ENSMUST00000219443.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGACTCCAAGGCTTTGTGGAACCTACGCAAACACTCTACCAACTaGGCTACACACCCTCAGGCCCTAGTTTTAAAAGCTTATATTCAC | + |
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Preference number: 1 (lower is better) Translates to: ADSKALWNLRKHSTN*ATHPQALVLKAYIH Trigger: GTGAATATAAGCTTTTAAAACTAGGGCCTGAGGGTGTGTAGCTCAGTTGGTAGAGTGTTTGCGTAGGTTCCACAAAGCCTTGGAGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR TCA 90 bp | AATGTGTTGCAGGCTATGCTCAAACTATGTAGTCAAGGACGATTCTaGACTTTTGATTTTTCTGCCTCTATCTCCTATATGCTAGGATTA | + |
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Preference number: 1 (lower is better) Translates to: NVLQAMLKLCSQGRF*TFDFSASISYMLGL Trigger: TAATCCTAGCATATAGGAGATAGAGGCAGAAAAATCAAAAGTTCAGAATCGTCCTTGACTACATAGTTTGAGCATAGCCTGCAACACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATATCTACTAAAAGCCTaGAACAGAGACCCCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIYLLKA*NRDPSI Trigger: AATAGAGGGGTCTCTGTTTCAGGCTTTTAGTAGATA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGTCAGTGTAACAGACTaGGCTTTAAACCATACTTTA | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIVSVTD*ALNHTL Trigger: TAAAGTATGGTTTAAAGCTCAGTCTGTTACACTGAC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAAACACTGTCGAGACTaGTTTTGGAATAAAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIKHCRD*FWNKKH Trigger: GTGCTTTTTATTCCAAAATCAGTCTCGACAGTGTTT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAATTCCTGTGTGCTTTaGAATAGGAATAATAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIINSCVL*NRNNRD Trigger: GTCCCTATTATTCCTATTGCAAAGCACACAGGAATT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATGTGTCCCTAAACAGTaGAATAACTTACAAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIICVPKQ*NNLQAT Trigger: TGTTGCTTGTAAGTTATTGCACTGTTTAGGGACACA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACAAACATCCCAAGCATaGCATAGTAACTGGAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIQTSQA*HSNWKL Trigger: TAATTTCCAGTTACTATGCCATGCTTGGGATGTTTG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGGAAGAGGTGTAAGGTaGTTAATGTGGAAACTTATA | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIGRGVR*LMWKLI Trigger: TATAAGTTTCCACATTAACCACCTTACACCTCTTCC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAACATACCTATACCCTTaGCCAAAAACAAACACAAGT | + |
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Preference number: 2 (lower is better) Translates to: FSSFTDNGSSVWIKHKIITYLYP*PKTNTS Trigger: ACTTGTGTTTGTTTTTGGCCAAGGGTATAGGTATGT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR TCA 72 bp | CAGGCTATGCTCAAACTATGTAGTCAAGGACGATTCTaGACTTTTGATTTTTCTGCCTCTATCTCCTATATG | + |
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Preference number: 3 (lower is better) Translates to: QAMLKLCSQGRF*TFDFSASISYM Trigger: CATATAGGAGATAGAGGCAGAAAAATCAAAAGTTCAGAATCGTCCTTGACTACATAGTTTGAGCATAGCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGTAGCCTGGTTCATGTaGACATCTTTGTTGAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIVAWFM*TSLLKL Trigger: CAATTTCAACAAAGATGTCAACATGAACCAGGCTAC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAACATACCTATACCCTaGGCCAAAAACAAACACAAG | + |
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Preference number: 3 (lower is better) Translates to: FSSFTDNGSSVWIKHKIINIPIP*AKNKHK Trigger: CTTGTGTTTGTTTTTGGCCAAGGGTATAGGTATGTT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR TCA 72 bp | AAACTAATTTCTCACCATTCAACTAAGATGAGAATATaGAATCCTGTGATTCCCCTTTTCTCCATCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KLISHHSTKMRI*NPVIPLFSILQ Trigger: CTGGAGGATGGAGAAAAGGGGAATCACAGGATTTCATATTCTCATCTTAGTTGAATGGTGAGAAATTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| 3UTR TCA 72 bp | GTATTTAACTCAAAGAGAACTCACCAGATCCATAGATaGCAGCAGATAGTCATAAAGTTGGGCTTATCTTAT | + |
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Preference number: 3 (lower is better) Translates to: VFNSKRTHQIHR*QQIVIKLGLSY Trigger: ATAAGATAAGCCCAACTTTATGACTATCTGCTGTCATCTATGGATCTGGTGAGTTCTCTTTGAGTTAAATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATTGTTGGCCAACTGCTaGCCCTGGTGCCTGAGAATT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIILLANC*PWCLRI Trigger: AATTCTCAGGCACCAGGGTCAGCAGTTGGCCAACAA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGGCCTACGCTCTCCATaGCCTTTTGAGGTTCTATCA | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIGLRSP*PFEVLS Trigger: TGATAGAACCTCAAAAGGTCATGGAGAGCGTAGGCC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGACACTGCAATTTGTTaGCCAACTGCTGACCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIDTAIC*PTADPG Trigger: ACCAGGGTCAGCAGTTGGCCAACAAATTGCAGTGTC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGCAGCACTGCAAGAATaGGAGTCAAGGAAAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIAALQE*ESRKGE Trigger: TTCACCTTTCCTTGACTCTCATTCTTGCAGTGCTGC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGAGATCCACACTAAATaGATCGCCACACATGGCACA | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIEIHTK*IATHGT Trigger: TGTGCCATGTGTGGCGATCCATTTAGTGTGGATCTC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATGCTCCAAGCCTAGCTaGTCGGTACAAATGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIICSKPS*SVQMYI Trigger: AATGTACATTTGTACCGATCAGCTAGGCTTGGAGCA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACTCTCCATGACCTTTTaGGGTTCTATCAGAAAACCC | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIILSMTF*GSIRKP Trigger: GGGTTTTCTGATAGAACCTCAAAAGGTCATGGAGAG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACTGAAGTGGTACCATTaGTTCTACCAATTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIILKWYH*FYQLSW Trigger: CCAGGACAATTGGTAGAATCAATGGTACCACTTCAG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAATGGTGGTGGCAACTaGAGTGGTACCATTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIINGGGN*SGTIDS Trigger: AGAATCAATGGTACCACTTCAGTTGCCACCACCATT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATCTACTATCTCTCGCTaGTGCCTACCATATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIISTISR*CLPYTS Trigger: AGAAGTATATGGTAGGCATCAGCGAGAGATAGTAGA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATCTCAAGTCAGCTTCTaGCACATCCTTATTGATAGG | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIISQVSF*HILIDR Trigger: CCTATCAATAAGGATGTGTCAGAAGCTGACTTGAGA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAATCATCGCTTGCATCTaGGTGTGTTCTTCTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIIIACI*VCSSVV Trigger: TACTACAGAAGAACACACTCAGATGCAAGCGATGAT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATCTACAAAAGGACACTaGAATTTGTTGGCCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIISTKGH*NLLANC Trigger: GCAGTTGGCCAACAAATTGCAGTGTCCTTTTGTAGA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAGCGGTTATCTCAGTTaGAATGTGTTCTCCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIISGYLS*NVFSFS Trigger: ACTGAAGGAGAACACATTGCAACTGAGATAACCGCT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACTGGTCAGATGTGATTaGAGGATTATCAATACCACC | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIILVRCD*RIINTT Trigger: GGTGGTATTGATAATCCTGCAATCACATCTGACCAG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGCTCAGAAGGTCGAATaGGATCCGTCTATCATTAAT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIAQKVE*DPSIIN Trigger: ATTAATGATAGACGGATCCCATTCGACCTTCTGAGC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAAATGTAAGGCGATTTaGCATCAACAGGCCGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIKCKAI*HQQAED Trigger: ATCTTCGGCCTGTTGATGCCAAATCGCCTTACATTT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATACATCATCTCCAATTaGACTATATGGAGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIYIISN*TIWRWC Trigger: GCACCACCTCCATATAGTCCAATTGGAGATGATGTA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGCGCTCTGTTTTATCTaGGATTTTTGCTGCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIALCFI*DFCCFQ Trigger: TTGGAAGCAGCAAAAATCCCAGATAAAACAGAGCGC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACCCCAGTATAAAAAGTaGTCATTGTTTACTACTCGG | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIPQYKK*SLFTTR Trigger: CCGAGTAGTAAACAATGATCACTTTTTATACTGGGG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAAAATTTGTACTTCGATaGGGCAAGAAAGTCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIKFVLR*GKKVWS Trigger: TGACCAGACTTTCTTGCCTCATCGAAGTACAAATTT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGGTATGACAATATTGTaGTCTGTATTCGCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIGMTIL*SVFASF Trigger: AAAGGAGGCGAATACAGATCACAATATTGTCATACC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACAATTTGGAGTGCTATaGACAGGATACTCATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIQFGVL*TGYSFP Trigger: AGGAAATGAGTATCCTGTTCATAGCACTCCAAATTG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGTTTCAACGACAGATTaGTGGATTTTAGTGGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIVSTTD*WILVVD Trigger: GTCTACCACTAAAATCCATCAATCTGTCGTTGAAAC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATACGTGACAATTTGGAGTaGTATGAACAGGATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIRDNLE*YEQDTH Trigger: ATGAGTATCCTGTTCATAGCACTCCAAATTGTCACG...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR GCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATTCAAACTTGTCTGTTaGTGTGACAACAAGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIFKLVC*CDNKLS Trigger: AGACAACTTGTTGTCACAGCAACAGACAAGTTTGAA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAACTCCAATTGAGGAGTaGTATGACAATATTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: FSSFTDNGSSVWIKHKIITPIEE*YDNIVI Trigger: GATCACAATATTGTCATACCACTCCTCAATTGGAGT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAATTATTCTGTCCAGCTaGAGCAGCACTGCAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIIILSS*SSTARM Trigger: CATTCTTGCAGTGCTGCTCAAGCTGGACAGAATAAT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAGTACATCATCTCCAATaGGACTATATGGAGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIVHHLQ*DYMEVV Trigger: CACCACCTCCATATAGTCCAATTGGAGATGATGTAC...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAACTGAAGTGGTACCATaGATTCTACCAATTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FSSFTDNGSSVWIKHKIITEVVP*ILPIVL Trigger: CAGGACAATTGGTAGAATCAATGGTACCACTTCAGT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATTTTATCTGGGATTTTaGCTGCTTCCAATAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIFYLGF*LLPIAL Trigger: CAGAGCTATTGGAAGCAGCAAAAATCCCAGATAAAA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATAATTATCACAGGCTTTTaGGATTTTGATAGCTGGACA | + |
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Preference number: 5 (lower is better) Translates to: FSSFTDNGSSVWIKHKIIIITGF*DFDSWT Trigger: TGTCCAGCTATCAAAATCCAAAAAGCCTGTGATAAT...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGCTTTACTGATAATGGCAGCAGCGTCTGGATAAAGCATAAAATTATATGTTTCAACGACAGATaGATGGATTTTAGTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: FSSFTDNGSSVWIKHKIICFNDR*MDFSGR Trigger: TCTACCACTAAAATCCATCAATCTGTCGTTGAAACA...TATAATTTTATGCTTTATCCAGACGCTGCTGCCATTATCAGTAAAGCTGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219443.2 |
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