RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP45 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035697

Ensembl transcript IDs: ENSMUST00000043311.7, ENSMUST00000099501.10, ENSMUST00000105373.8

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTaGAGCCAGAGCCACCTCCAGCTCCACACACAGAGGTCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: CAPTRLSMSSLLQDS*SQSHLQLHTQRSGL
Trigger: CAGCCCTGACCTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 90 bp GAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTaGAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGA +
Preference number: 1 (lower is better)
Translates to: ETHCVPPPVCPCPAS*KIPEARATSSSTHR
Trigger: TCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 90 bp CATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTaGCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTG +
Preference number: 1 (lower is better)
Translates to: HVESSFTAPWERPTV*PHPSVHVQPPARFL
Trigger: CAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR CCA 90 bp TGCAGCTGCATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTaGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCCTGAT +
Preference number: 1 (lower is better)
Translates to: CSCIPTGTQRPGNSI*DCYPSVSMVPGSPD
Trigger: ATCAGGGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGATGCAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 90 bp GTTTATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTaGTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: VYFKKIVSSCGKLLY*SLGETHCVPPPVCP
Trigger: TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR TCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCAGGCTGACATTGAGCTaGTGGTCCCTGCCATCACCA +
Preference number: 2 (lower is better)
Translates to: SLGETHCVPPPVCPCPASRLTLS*WSLPSP
Trigger: TGGTGATGGCAGGGACCATCAGCTCAATGTCAGCCT...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR TCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCAGGCTGACATTGAGCTaGTGGTCCCTGCCATCACCA +
Preference number: 2 (lower is better)
Translates to: PPPVCPCPASCKIPEARARLTLS*WSLPSP
Trigger: TGGTGATGGCAGGGACCATCAGCTCAATGTCAGCCT...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR TCA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCAGACACATCCAGACTaGTGGGGACCATGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQQTHPD*WGPWER
Trigger: TCTCTCCCATGGTCCCCATCAGTCTGGATGTGTCTG...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR GCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGCCATCATGGGAATCTaGAGCTGCATCCCCACAGGC +
Preference number: 2 (lower is better)
Translates to: PPVCPCPASCKIPEARATAIMGI*SCIPTG
Trigger: GCCTGTGGGGATGCAGCTGCAGATTCCCATGATGGC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR TCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCAGACACATCCAGACTaGTGGGGACCATGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFQTHPD*WGPWER
Trigger: TCTCTCCCATGGTCCCCATCAGTCTGGATGTGTCTG...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR GCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCATGGGAATCTGCAGCTaGATCCCCACAGGCACACAA +
Preference number: 2 (lower is better)
Translates to: PPPVCPCPASCKIPEARAMGICS*IPTGTQ
Trigger: TTGTGTGCCTGTGGGGATGCAGCTGCAGATTCCCAT...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR TCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGAGGCTGACATTGAGCTaGTGGTCCCTGCCATCACCA +
Preference number: 2 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGRLTLS*WSLPSP
Trigger: TGGTGATGGCAGGGACCATCAGCTCAATGTCAGCCT...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR GCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATATGGGAATCTGCAGCTaGATCCCCACAGGCACACAA +
Preference number: 2 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDMGICS*IPTGTQ
Trigger: TTGTGTGCCTGTGGGGATGCAGCTGCAGATTCCCAT...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR GCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGCCATGTCCAGCCTCCTaGAAGATTCCTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLPCPAS*KIPEAR
Trigger: TCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR CCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACAATCCATCTGTGTCCATaGTACCAGGGAGCCCTGATC +
Preference number: 2 (lower is better)
Translates to: PCPASCKIPEARATSSSTIHLCP*YQGALI
Trigger: GATCAGGGCTCCCTGGTACCATGGACACAGATGGAT...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR CCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATCCAGGCAACTCCATCTaGGACTGTTATCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDPGNSI*DCYPSV
Trigger: CACAGATGGATAACAGTCCCAGATGGAGTTGCCTGG...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR CCA 90 bp CATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACGAGATGAGGCCATCATaGGAATCTGCAGCTGCATCC +
Preference number: 2 (lower is better)
Translates to: HVQPPARFLKPEPPPAPHEMRPS*ESAAAS
Trigger: GGATGCAGCTGCAGATTCCCATGATGGCCTCATCTC...GTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCATCCATCTGTGTCCATaGTACCAGGGAGCCCTGATC +
Preference number: 2 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPIHLCP*YQGALI
Trigger: GATCAGGGCTCCCTGGTACCATGGACACAGATGGAT...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACCCAGGCAACTCCATCTaGGACTGTTATCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHPGNSI*DCYPSV
Trigger: CACAGATGGATAACAGTCCCAGATGGAGTTGCCTGG...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR-3UTR GCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGCCATCATGGGAATCTaGAGCTGCATCCCCACAGGC +
Preference number: 2 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGAIMGI*SCIPTG
Trigger: GCCTGTGGGGATGCAGCTGCAGATTCCCATGATGGC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 72 bp TGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTaGAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: CVPPPVCPCPAS*KIPEARATSSS
Trigger: GGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 72 bp AGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTaGCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: SSFTAPWERPTV*PHPSVHVQPPA
Trigger: TGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 72 bp CATGGGAGAGATGAGGCCATCATGGGAATCTGCAGCTaGATCCCCACAGGCACACAAAGGCCAGGCAACTCC +
Preference number: 3 (lower is better)
Translates to: HGRDEAIMGICS*IPTGTQRPGNS
Trigger: GGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGATGCAGCTGCAGATTCCCATGATGGCCTCATCTCTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR CCA 72 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTaGGACTGTTATCCATCTGTGTCCATGGTACCAGGG +
Preference number: 3 (lower is better)
Translates to: IPTGTQRPGNSI*DCYPSVSMVPG
Trigger: CCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR CCA 72 bp AGACTGATGGGGACCATGGGAGAGATGAGGCCATCATaGGAATCTGCAGCTGCATCCCCACAGGCACACAAA +
Preference number: 3 (lower is better)
Translates to: RLMGTMGEMRPS*ESAAASPQAHK
Trigger: TTTGTGTGCCTGTGGGGATGCAGCTGCAGATTCCCATGATGGCCTCATCTCTCCCATGGTCCCCATCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR CCA 72 bp GCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATaGTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTC +
Preference number: 3 (lower is better)
Translates to: ATPSGTVIHLCP*YQGALISLKFL
Trigger: GAGGAACTTCAGGGAGATCAGGGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
3UTR GCA 72 bp AAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTaGTCCTTGGGAGAGACCCACTGTGTGCCCCCACCC +
Preference number: 3 (lower is better)
Translates to: KKIVSSCGKLLY*SLGETHCVPPP
Trigger: GGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCATGCCCCCTCCTGGCTaGCAGGCGCCTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPAMPPPG*QAPPLA
Trigger: AGCCAGAGGAGGCGCCTGGCAGCCAGGAGGGGGCAT...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCGGACAGGGATGTGGCTaGTGGCTCCAGGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASGQGCG*WLQAGS
Trigger: GCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCC...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGGCTGGCCACACTGGGTaGATGCCCCCTCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQAGHTG*MPPPGC
Trigger: GCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGC...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCGCTGGCCACACTGGGTaGATGCCCCCTCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPVCPCPASCKIPEARAAGHTG*MPPPGC
Trigger: GCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGC...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCTCGGAGCCGCATGGTaGGCAGAGGGGCCCGTGATG +
Preference number: 4 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQLGAAW*AEGPVM
Trigger: CATCACGGGCCCCTCTGCCCACCATGCGGCTCCGAG...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCCGCAGCGTCAGGGGCTaGATGAAGGTCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASRSVRG*MKVWVC
Trigger: GCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCG...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGAGAGGCCGCAGTCCCTaGGCCTGGGCCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGRGRSP*AWACAL
Trigger: CAGGGCACAGGCCCAGGCGCAGGGACTGCGGCCTCT...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTCGGCTGGCAGATCCTaGATGAGCTCACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASSAGRS*MSSRRR
Trigger: CCGCCTGCGTGAGCTCATGCAGGATCTGCCAGCCGA...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCGTTCCTCCTCAGCCTTaGCCACCTGGAGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPVCPCPASCKIPEARAVPPQP*PPGAGP
Trigger: AGGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAAC...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGCTCCTCGGAGCCGCATaGTGGGCAGAGGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTELLGAA*WAEGPV
Trigger: CACGGGCCCCTCTGCCCACCATGCGGCTCCGAGGAG...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCAAGGAGGACTGCGGGTTaGGGCTCCCCGCGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPRRTAG*GSPRGS
Trigger: AGAACCGCGCGGGGAGCCCCAACCCGCAGTCCTCCT...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099501.10
CDS-3UTR CCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGCCGTGGACAGGGATGTaGCTGGTGGCTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMPWTGM*LVAPGR
Trigger: CCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGG...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCACCAAGCCAGCTTCCTaGTCCCCCAGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASTKPAS*SPSSSL
Trigger: CAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTGGT...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCACCAAGCCAGCTTCCTaGTCCCCCAGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPATKPAS*SPSSSL
Trigger: CAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTGGT...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCAGACTGGTGCCACCTGTaGTCTGCCCTCCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPDWCHL*SALLGA
Trigger: GGCTCCGAGGAGGGCAGATCACAGGTGGCACCAGTC...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGACTGGTGCCACCTGTaGTCTGCCCTCCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATDWCHL*SALLGA
Trigger: GGCTCCGAGGAGGGCAGATCACAGGTGGCACCAGTC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGTCTGGGTCTGCAGTGTaGCCGCTGCCTGCACCATGC +
Preference number: 4 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQSGSAV*PLPAPC
Trigger: GCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGA...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGATGCCCCCTCCTGGCTaGCAGGCGCCTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGMPPPG*QAPPLA
Trigger: AGCCAGAGGAGGCGCCTGGCAGCCAGGAGGGGGCAT...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTCTGCCTCCTCCTaGAGGGGGAAGACAATGCCC +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPASSASS*RGKTMP
Trigger: GGGCATTGTCTTCCCCCTGCAGGAGGAGGCAGAGGA...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGTTCCTCCTCAGCCTTaGCCACCTGGAGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATVPPQP*PPGAGP
Trigger: AGGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAAC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCAGGGTCCACTGGGCATaGCCACAGGTAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPARVHWA*PQVTRG
Trigger: ACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCT...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCGTGGATGCCCCCTCCTaGCTGCCAGGCGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPVDAPS*LPGASS
Trigger: AGAGGAGGCGCCTGGCAGCCAGGAGGGGGCATCCAC...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCAGGGATGTGGCTGGTaGCTCCAGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFQGCGW*LQAGSF
Trigger: GAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTG...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATAGCTGCAGGCGGCCCTaGAGCTTCTTGTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDSCRRP*SFLWPH
Trigger: GTGTGGCCACAAGAAGCTTCAGGGCCGCCTGCAGCT...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCTGCTCCAGGAAACTaGGGCGGTGTAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPASAPGN*GGVEHW
Trigger: CCAGTGCTCTACACCGCCTCAGTTTCCTGGAGCAGA...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTCTGCTCCAGGAAACTaGGGCGGTGTAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASSAPGN*GGVEHW
Trigger: CCAGTGCTCTACACCGCCTCAGTTTCCTGGAGCAGA...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTGGCTGCCGCTCCTaGCTGGTGCCACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPCGCRS*LVPPVI
Trigger: GATCACAGGTGGCACCAGTCAGGAGCGGCAGCCACA...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCATGTGGCTGCCGCTCCTaGCTGGTGCCACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPCGCRS*LVPPVI
Trigger: GATCACAGGTGGCACCAGTCAGGAGCGGCAGCCACA...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATCGCAGCGTCAGGGGCTaGATGAAGGTCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDRSVRG*MKVWVC
Trigger: GCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCG...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGCGCAGCGTCAGGGGCTaGATGAAGGTCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMRSVRG*MKVWVC
Trigger: GCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCG...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCGTCCTTGTTGGGTGCTaGCTCAGAGGTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASVLVGC*LRGATF
Trigger: GAAGGTGGCACCTCTGAGGCAGCACCCAACAAGGAC...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCTCCTCTGCCTCCTCCTaGAGGGGGAAGACAATGCCC +
Preference number: 4 (lower is better)
Translates to: PPPVCPCPASCKIPEARASSASS*RGKTMP
Trigger: GGGCATTGTCTTCCCCCTGCAGGAGGAGGCAGAGGA...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCGGCTTCCGTCCTCTaGCTCCTCCTGCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDSASVL*LLLQGE
Trigger: TTCCCCCTGCAGGAGGAGGCAGAGGACGGAAGCCGA...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCGGCTTCCGTCCTCTaGCTCCTCCTGCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMSASVL*LLLQGE
Trigger: TTCCCCCTGCAGGAGGAGGCAGAGGACGGAAGCCGA...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTCTCGGGCGCGAGTCTaGCAGCACAGGGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPSRARV*QHRGSW
Trigger: CCATGACCCCCTGTGCTGCCAGACTCGCGCCCGAGA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043311.7
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTCACCCAGGCACTCATaGGCCAGTGGCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGASPRHS*ASGRRA
Trigger: GGCCCGCCGGCCACTGGCCCATGAGTGCCTGGGTGA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCTCACCCAGGCACTCATaGGCCAGTGGCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: FMWKAPLLLLGRDPLCAPSPRHS*ASGRRA
Trigger: GGCCCGCCGGCCACTGGCCCATGAGTGCCTGGGTGA...GGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGAAGAGAGGGACACGGTaGCGTCAGTGGGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMKRGTR*RQWVEA
Trigger: GGCCTCGACCCACTGACGCCACCGTGTCCCTCTCTT...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTCCAGCTGGCCACACTaGGTGGATGCCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPSSWPH*VDAPSW
Trigger: CCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTCCTCACTGCCACTATaGCTCTGGGGACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASSSLPL*LWGPSS
Trigger: GGAGGAAGGTCCCCAGAGCCATAGTGGCAGTGAGGA...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCCTCCTCGGAGCCGCATaGTGGGCAGAGGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGALLGAA*WAEGPV
Trigger: CACGGGCCCCTCTGCCCACCATGCGGCTCCGAGGAG...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACAGGGATGTGGCTGGTaGCTCCAGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTQGCGW*LQAGSF
Trigger: GAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTG...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGCCTGCTGCACTGGCATaGCGGCTCAGGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLPAALA*RLRLVG
Trigger: ACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGG...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGCGTCAGGGGCTGCATaGAGGTCTGGGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGASGAA*RSGSAV
Trigger: CACTGCAGACCCAGACCTTCATGCAGCCCCTGACGC...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACAAGCTGCAGGCGGCCCTaGAGCTTCTTGTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTSCRRP*SFLWPH
Trigger: GTGTGGCCACAAGAAGCTTCAGGGCCGCCTGCAGCT...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCACTGGCGTCCGAGGATaGAAGGGGGTCAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATTGVRG*KGVRSV
Trigger: GACGCTTCTGACCCCCTTTCATCCTCGGACGCCAGT...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGACTGGCGTCCGAGGATaGAAGGGGGTCAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMTGVRG*KGVRSV
Trigger: GACGCTTCTGACCCCCTTTCATCCTCGGACGCCAGT...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGGGCAGAGGGGCCCGTaGTGTGTTGTTGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPGQRGP*CVVGLV
Trigger: AACCAGTCCAACAACACATCACGGGCCCCTCTGCCC...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGTGTGGCTGCCGCTCCTaGCTGGTGCCACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGCGCRS*LVPPVI
Trigger: GATCACAGGTGGCACCAGTCAGGAGCGGCAGCCACA...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGGGCTGGTGGGTCTTTTaGGTGTCCCTGTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMGWWVF*VSLCPW
Trigger: CCAAGGGCACAGGGACACTCAAAAGACCCACCAGCC...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCCCCCCTTCGCATCGCTaGAGAAGCATGTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PPPVCPCPASCKIPEARAPPSHR*RSMSTS
Trigger: AGAGGTGGACATGCTTCTGCAGCGATGCGAAGGGGG...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGCGCAGGTTGGCCTCTaGCTCTTGCAGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATAQVGL*LLQLPL
Trigger: CAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATCCTCTTCCTCCAGTCTaGGCCTCTTGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDPLPPV*ASCPGP
Trigger: AGGCCCTGGACAAGAGGCGCAGACTGGAGGAAGAGG...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCCTCTTCCTCCAGTCTaGGCCTCTTGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFPLPPV*ASCPGP
Trigger: AGGCCCTGGACAAGAGGCGCAGACTGGAGGAAGAGG...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGTCGGCTGGCAGATCCTaGATGAGCTCACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGSAGRS*MSSRRR
Trigger: CCGCCTGCGTGAGCTCATGCAGGATCTGCCAGCCGA...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGTCGGCTTCCGTCCTCTaGCTCCTCCTGCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGSASVL*LLLQGE
Trigger: TTCCCCCTGCAGGAGGAGGCAGAGGACGGAAGCCGA...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCGGCTGCATGAAGGTCTaGGTCTGCAGTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFGCMKV*VCSVPA
Trigger: AGCGGGCACACTGCAGACCCAGACCTTCATGCAGCC...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGCGCATGTGCGGTAAGTaGCCATGGCCTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTERMCGK*PWPPRP
Trigger: AGGCCGAGGAGGCCATGGCCACTTACCGCACATGCG...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCGGCGGAAGGGTCCACTaGGCATGGCCACAGGTAACT +
Preference number: 4 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFGGRVH*AWPQVT
Trigger: AGTTACCTGTGGCCATGCCCAGTGGACCCTTCCGCC...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGAAGAGAGGGACACGGTaGCGTCAGTGGGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTEKRGTR*RQWVEA
Trigger: GGCCTCGACCCACTGACGCCACCGTGTCCCTCTCTT...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGGCCAGGCGCCTCCTCTaGCTCCTCCTCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGARRLL*LLLKDQ
Trigger: CTGGTCTTTGAGGAGGAGCCAGAGGAGGCGCCTGGC...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCGCTGGCCACACTGGGTaGATGCCCCCTCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FMWKAPLLLLGRDPLCAPAGHTG*MPPPGC
Trigger: GCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGC...GGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGACCGTGGACAGGGATGTaGCTGGTGGCTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGPWTGM*LVAPGR
Trigger: CCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGG...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCGTGTCTCCACGGTGTTaGGGAGTGGGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PPPVCPCPASCKIPEARAVSPRC*GVGIWR
Trigger: TCTCCAGATACCCACTCCTCAACACCGTGGAGACAC...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTGCCTGATGACCTCCTaGATCTGCCGCAGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPCLMTS*ICRSAV
Trigger: GACTGCGCTGCGGCAGATTCAGGAGGTCATCAGGCA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTGCCTGATGACCTCCTaGATCTGCCGCAGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLCLMTS*ICRSAV
Trigger: GACTGCGCTGCGGCAGATTCAGGAGGTCATCAGGCA...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATGCTTTAGGACGTTGCTaGTGTCGTGGGGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDALGRC*CRGVRP
Trigger: AGGCCTCACCCCACGACATCAGCAACGTCCTAAAGC...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGGCTTTAGGACGTTGCTaGTGTCGTGGGGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMALGRC*CRGVRP
Trigger: AGGCCTCACCCCACGACATCAGCAACGTCCTAAAGC...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGGGGCAGAGGGGCCCGTaGTGTGTTGTTGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTEGQRGP*CVVGLV
Trigger: AACCAGTCCAACAACACATCACGGGCCCCTCTGCCC...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGGCTGGTGGGTCTTTTaGGTGTCCCTGTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGGWWVF*VSLCPW
Trigger: CCAAGGGCACAGGGACACTCAAAAGACCCACCAGCC...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGCCCCCTTCGCATCGCTaGAGAAGCATGTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMPPSHR*RSMSTS
Trigger: AGAGGTGGACATGCTTCTGCAGCGATGCGAAGGGGG...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACGCGCAGGTTGGCCTCTaGCTCTTGCAGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVQPPARFLKPEPPPAPHAQVGL*LLQLPL
Trigger: CAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGC...GTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGTCCTTGTTGGGTGCTaGCTCAGAGGTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPVLVGC*LRGATF
Trigger: GAAGGTGGCACCTCTGAGGCAGCACCCAACAAGGAC...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTGCGAAGTCGGTGTGTaGGGGCTGCCTTGGACAATC +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATCEVGV*GLPWTI
Trigger: GATTGTCCAAGGCAGCCCGCACACACCGACTTCGCA...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGCAGGGGGAAGACAATaGCCTCAGCAGACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATAGGRQ*PQQTPA
Trigger: AGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACATCCTCTGCCTCCTCCTaGAGGGGGAAGACAATGCCC +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTSSASS*RGKTMP
Trigger: GGGCATTGTCTTCCCCCTGCAGGAGGAGGCAGAGGA...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGCCCTGTGGTCCTTGTTaGGTGCTGCCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLPCGPC*VLPQRC
Trigger: GCACCTCTGAGGCAGCACCCAACAAGGACCACAGGG...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCCCCTGTGGTCCTTGTTaGGTGCTGCCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPPCGPC*VLPQRC
Trigger: GCACCTCTGAGGCAGCACCCAACAAGGACCACAGGG...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCCCATTCTCAAAAGCCTaGCACAGCTTCTCCACACGC +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPAPFSKA*HSFSTR
Trigger: GCGTGTGGAGAAGCTGTGCCAGGCTTTTGAGAATGG...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCCCATTCTCAAAAGCCTaGCACAGCTTCTCCACACGC +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASPFSKA*HSFSTR
Trigger: GCGTGTGGAGAAGCTGTGCCAGGCTTTTGAGAATGG...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGATCCAGCTGGCCACACTaGGTGGATGCCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGSSWPH*VDAPSW
Trigger: CCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGA...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGCTGCCACTATGGCTCTaGGGACCTTCCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTELPLWL*GPSSRP
Trigger: AGGCCTGGAGGAAGGTCCCCAGAGCCATAGTGGCAG...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCTCACTGCCACTATaGCTCTGGGGACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMSSLPL*LWGPSS
Trigger: GGAGGAAGGTCCCCAGAGCCATAGTGGCAGTGAGGA...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTCTCGGAGCCGCATGGTaGGCAGAGGGGCCCGTGATG +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSLGAAW*AEGPVM
Trigger: CATCACGGGCCCCTCTGCCCACCATGCGGCTCCGAG...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCAGTGTCTCCACGGTGTTaGGGAGTGGGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPVSPRC*GVGIWR
Trigger: TCTCCAGATACCCACTCCTCAACACCGTGGAGACAC...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGTGTGGGGCTCGTGTGTaGCGCTCTGTCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTECGARV*RSVCSC
Trigger: ACAACTGCAGACAGAGCGTCACACACGAGCCCCACA...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCGTCAGGGGCTGCATaGAGGTCTGGGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGASGAA*RSGSAV
Trigger: CACTGCAGACCCAGACCTTCATGCAGCCCCTGACGC...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCACAGCTCCTCACTGGATaGCATCGTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPQLLTG*HRPTGR
Trigger: TCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTG...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACATCTGCTCCAGGAAACTaGGGCGGTGTAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTSAPGN*GGVEHW
Trigger: CCAGTGCTCTACACCGCCTCAGTTTCCTGGAGCAGA...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTGGACTGGTTGGTGTTaGAGTGACACAGCCACGGAC +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDWTGWC*SDTATD
Trigger: GTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCA...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCTTGGCCTCTGCCTCTTaGAGCTTCCTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFLASAS*SFLCAR
Trigger: TCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAA...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGGTGTCCTCCAGCTCCTaGTTCTGTGTCTTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQVSSSS*FCVFAS
Trigger: AGACGCAAAGACACAGAAGCAGGAGCTGGAGGACAC...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACGTTCACGGGCAGCGGTaGTGTCTGCATGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: HVQPPARFLKPEPPPAPHVHGQR*CLHVHQ
Trigger: CTGATGCACATGCAGACAGCACCGCTGCCCGTGAAC...GTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGGTTCACGGGCAGCGGTaGTGTCTGCATGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLVHGQR*CLHVHQ
Trigger: CTGATGCACATGCAGACAGCACCGCTGCCCGTGAAC...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTGCGAAGTCGGTGTGTaGGGGCTGCCTTGGACAATC +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPCEVGV*GLPWTI
Trigger: GATTGTCCAAGGCAGCCCGCACACACCGACTTCGCA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGGCAGGGGGAAGACAATaGCCTCAGCAGACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGAGGRQ*PQQTPA
Trigger: AGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGC...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCCTCTGTCTGCAGTTGTaGACAACCTTCTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SLGETHCVPPPVCPCPASLCLQL*TTFWRP
Trigger: AGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAG...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGGACAAGAGAGGCATGTaGGGCTCGTGTGTGACGCTC +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTEDKRGM*GSCVTL
Trigger: GAGCGTCACACACGAGCCCCACATGCCTCTCTTGTC...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGGTTTGTAGCCCTGTTTaGCCTTGCGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMVCSPV*PCAGWP
Trigger: AGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAAC...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATCCTCGGCCTTGTTTTTaGCCTCTTCCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDPRPCF*PLPPVC
Trigger: GCAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGG...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGCGGTAAGTGGCCATaGCCTCCTCGGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPCGKWP*PPRPCF
Trigger: AAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCA...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCATCAAGTCCCCTGAGCTaGTGTCCAGACCAACTTCGG +
Preference number: 4 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPSSPLS*CPDQLR
Trigger: CCGAAGTTGGTCTGGACACCAGCTCAGGGGACTTGA...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCGCCAGGCGCCTCCTCTaGCTCCTCCTCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGAARRLL*LLLKDQ
Trigger: CTGGTCTTTGAGGAGGAGCCAGAGGAGGCGCCTGGC...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGGAAGCCTGCTGCACTaGCATGGCGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSGSLLH*HGGSGW
Trigger: CCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCC...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCATTGTTCCAGGGCCAGTaGGTAGATGGACAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPLFQGQ*VDGQER
Trigger: CCTCTCTTGTCCATCTACTCACTGGCCCTGGAACAA...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACCGGGGTCCATGCCATTaGGGTCAGCTGAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: HVQPPARFLKPEPPPAPHRGPCH*GQLNQR
Trigger: CCTTTGATTCAGCTGACCTCAATGGCATGGACCCCG...GTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTGGACTGGTTGGTGTTaGAGTGACACAGCCACGGAC +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLWTGWC*SDTATD
Trigger: GTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCA...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAATGAAGGTCTGGGTCTaGAGTGTGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGMKVWV*SVPAAC
Trigger: GCAGGCAGCGGGCACACTGCAGACCCAGACCTTCAT...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATGTGTCCTCCAGCTCCTaGTTCTGTGTCTTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDVSSSS*FCVFAS
Trigger: AGACGCAAAGACACAGAAGCAGGAGCTGGAGGACAC...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTCACCCAGGCACTCATaGGCCAGTGGCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLSPRHS*ASGRRA
Trigger: GGCCCGCCGGCCACTGGCCCATGAGTGCCTGGGTGA...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTTGTGGACAACCTTCTaGAGACCTTTGGCGAATTCC +
Preference number: 4 (lower is better)
Translates to: CSLGETHCVPPPVCPCPALWTTF*RPLANS
Trigger: GGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAA...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCTCTGTCTGCAGTTGTaGACAACCTTCTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQLCLQL*TTFWRP
Trigger: AGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAG...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATGCCTGCACCATGCCGTaGCCAAACTCCAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDACTMP*PNSKSC
Trigger: ACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGC...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGCCTGCACCATGCCGTaGCCAAACTCCAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATACTMP*PNSKSC
Trigger: ACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGGTTTGTAGCCCTGTTTaGCCTTGCGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTEVCSPV*PCAGWP
Trigger: AGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAAC...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGTTCCTCCTCAGCCTTaGCCACCTGGAGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPVPPQP*PPGAGP
Trigger: AGGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAAC...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACCCTCGGCCTTGTTTTTaGCCTCTTCCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HVQPPARFLKPEPPPAPHPRPCF*PLPPVC
Trigger: GCAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGG...GTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACCTCGGCCTTGTTTTTaGCCTCTTCCTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTPRPCF*PLPPVC
Trigger: GCAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGG...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTGCGGTAAGTGGCCATaGCCTCCTCGGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPCGKWP*PPRPCF
Trigger: AAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCAGGGTCCACTGGGCATaGCCACAGGTAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGARVHWA*PQVTRG
Trigger: ACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCT...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCGGCGGAAGGGTCCACTaGGCATGGCCACAGGTAACT +
Preference number: 4 (lower is better)
Translates to: FMWKAPLLLLGRDPLCAPGGRVH*AWPQVT
Trigger: AGTTACCTGTGGCCATGCCCAGTGGACCCTTCCGCC...GGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCTTCTTGTGGCCACACTaGATGGCCAGGGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFFLWPH*MARVSK
Trigger: TTTGGAGACCCTGGCCATCCAGTGTGGCCACAAGAA...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGACGTTGCTGATGTCGTaGGGTGAGGCCTGTGACAAC +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGTLLMS*GEACDN
Trigger: GTTGTCACAGGCCTCACCCCACGACATCAGCAACGT...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTGCCCTTGGCTACCGTaGACAGGGATGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGACPWLP*TGMWLV
Trigger: CACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAAGCCTGCTGCACTaGCATGGCGGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQGSLLH*HGGSGW
Trigger: CCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTGTGGGGCTCGTGTGTaGCGCTCTGTCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGACGARV*RSVCSC
Trigger: ACAACTGCAGACAGAGCGTCACACACGAGCCCCACA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTTGTTCCAGGGCCAGTaGGTAGATGGACAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPLFQGQ*VDGQER
Trigger: CCTCTCTTGTCCATCTACTCACTGGCCCTGGAACAA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGCGTCAGGGGCTGCATaGAGGTCTGGGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPASGAA*RSGSAV
Trigger: CACTGCAGACCCAGACCTTCATGCAGCCCCTGACGC...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTTGCCTGATGACCTCCTaGATCTGCCGCAGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSCLMTS*ICRSAV
Trigger: GACTGCGCTGCGGCAGATTCAGGAGGTCATCAGGCA...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCACCAAGCCAGCTTCCTaGTCCCCCAGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPTKPAS*SPSSSL
Trigger: CAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTGGT...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAAGCTGCAGGCGGCCCTaGAGCTTCTTGTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPSCRRP*SFLWPH
Trigger: GTGTGGCCACAAGAAGCTTCAGGGCCGCCTGCAGCT...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGACCCCCTTCGCATCGCTaGAGAAGCATGTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGPPSHR*RSMSTS
Trigger: AGAGGTGGACATGCTTCTGCAGCGATGCGAAGGGGG...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACAGAGGCCGCAGTCCCTaGGCCTGGGCCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHRGRSP*AWACAL
Trigger: CAGGGCACAGGCCCAGGCGCAGGGACTGCGGCCTCT...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGTCGGCTGGCAGATCCTaGATGAGCTCACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQSAGRS*MSSRRR
Trigger: CCGCCTGCGTGAGCTCATGCAGGATCTGCCAGCCGA...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCGCAGGGGGAAGACAATaGCCTCAGCAGACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FMWKAPLLLLGRDPLCAPAGGRQ*PQQTPA
Trigger: AGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGC...GGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGACTCTCGCACAGCATCTaGAAGTTCACGGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGLSHSI*KFTGSG
Trigger: ACCGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAG...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGGCGGAAGGGTCCACTaGGCATGGCCACAGGTAACT +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSGGRVH*AWPQVT
Trigger: AGTTACCTGTGGCCATGCCCAGTGGACCCTTCCGCC...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTTGGACAATCCCACATaGCGGAAGGGTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGALDNPT*RKGPLG
Trigger: GCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTTCTTGTGGCCACACTaGATGGCCAGGGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLFLWPH*MARVSK
Trigger: TTTGGAGACCCTGGCCATCCAGTGTGGCCACAAGAA...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACCATTCTCAAAAGCCTaGCACAGCTTCTCCACACGC +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTPFSKA*HSFSTR
Trigger: GCGTGTGGAGAAGCTGTGCCAGGCTTTTGAGAATGG...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGAAGAGAGGGACACGGTaGCGTCAGTGGGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQKRGTR*RQWVEA
Trigger: GGCCTCGACCCACTGACGCCACCGTGTCCCTCTCTT...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCTGCCACTATGGCTCTaGGGACCTTCCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPLPLWL*GPSSRP
Trigger: AGGCCTGGAGGAAGGTCCCCAGAGCCATAGTGGCAG...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGCTCGGAGCCGCATGGTaGGCAGAGGGGCCCGTGATG +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLLGAAW*AEGPVM
Trigger: CATCACGGGCCCCTCTGCCCACCATGCGGCTCCGAG...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGGGACAGGGATGTGGCTaGTGGCTCCAGGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLGQGCG*WLQAGS
Trigger: GCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCC...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCTGCCCTTGGCTACCGTaGACAGGGATGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPCPWLP*TGMWLV
Trigger: CACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCA...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCCGGACACAGTGCAGCTaGAGGACACCGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGARTQCS*RTPQWF
Trigger: AAACCATTGCGGTGTCCTTCAGCTGCACTGTGTCCG...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGGCAGAGGGGCCCGTaGTGTGTTGTTGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQGQRGP*CVVGLV
Trigger: AACCAGTCCAACAACACATCACGGGCCCCTCTGCCC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGATTGGCCTCTGCCTCTTaGAGCTTCCTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGLASAS*SFLCAR
Trigger: TCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAA...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGGTCATATAGTTTGCTaGTCTCGCACAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: PPVCPCPASCKIPEARATGHIVC*SRTASG
Trigger: TCCAGATGCTGTGCGAGAGCAGCAAACTATATGACC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTTGTGGACAACCTTCTaGAGACCTTTGGCGAATTCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMLWTTF*RPLANS
Trigger: GGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAA...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGCTCTGTCTGCAGTTGTaGACAACCTTCTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTELCLQL*TTFWRP
Trigger: AGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAG...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCGACAAGAGAGGCATGTaGGGCTCGTGTGTGACGCTC +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPDKRGM*GSCVTL
Trigger: GAGCGTCACACACGAGCCCCACATGCCTCTCTTGTC...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGCTGCATGAAGGTCTaGGTCTGCAGTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQGCMKV*VCSVPA
Trigger: AGCGGGCACACTGCAGACCCAGACCTTCATGCAGCC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCGTTTGTAGCCCTGTTTaGCCTTGCGCAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGAVCSPV*PCAGWP
Trigger: AGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAAC...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCTCTCGCACAGCATCTaGAAGTTCACGGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPLSHSI*KFTGSG
Trigger: ACCGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAG...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAAGGGTCCACTGGGCATaGCCACAGGTAACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPRVHWA*PQVTRG
Trigger: ACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCT...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCTTGGACAATCCCACATaGCGGAAGGGTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPLDNPT*RKGPLG
Trigger: GCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAA...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGATGTGGCCACACTGGATaGCCAGGGTCTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGCGHTG*PGSPNT
Trigger: AGTGTTTGGAGACCCTGGCCATCCAGTGTGGCCACA...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCACGTTGCTGATGTCGTaGGGTGAGGCCTGTGACAAC +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGATLLMS*GEACDN
Trigger: GTTGTCACAGGCCTCACCCCACGACATCAGCAACGT...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACGTGGATGCCCCCTCCTaGCTGCCAGGCGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHVDAPS*LPGASS
Trigger: AGAGGAGGCGCCTGGCAGCCAGGAGGGGGCATCCAC...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTCCAGCTGGCCACACTaGGTGGATGCCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLSSWPH*VDAPSW
Trigger: CCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGA...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGTGTGGGGCTCGTGTGTaGCGCTCTGTCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQCGARV*RSVCSC
Trigger: ACAACTGCAGACAGAGCGTCACACACGAGCCCCACA...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCAGCTCCTCACTGGATaGCATCGTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPQLLTG*HRPTGR
Trigger: TCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTG...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCATCCAAACACTTTTTGTaGCAAGCCAGACAGCACTCT +
Preference number: 4 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPSKHFL*QARQHS
Trigger: AGAGTGCTGTCTGGCTTGTCACAAAAAGTGTTTGGA...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGCTTTAGGACGTTGCTaGTGTCGTGGGGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQALGRC*CRGVRP
Trigger: AGGCCTCACCCCACGACATCAGCAACGTCCTAAAGC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTTGGACTGGTTGGTGTTaGAGTGACACAGCCACGGAC +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSWTGWC*SDTATD
Trigger: GTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCA...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGAGAGGCCGCAGTCCCTaGGCCTGGGCCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGERGRSP*AWACAL
Trigger: CAGGGCACAGGCCCAGGCGCAGGGACTGCGGCCTCT...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGTTCACGGGCAGCGGTaGTGTCTGCATGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQVHGQR*CLHVHQ
Trigger: CTGATGCACATGCAGACAGCACCGCTGCCCGTGAAC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGTCCTTGTTGGGTGCTaGCTCAGAGGTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQVLVGC*LRGATF
Trigger: GAAGGTGGCACCTCTGAGGCAGCACCCAACAAGGAC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACAACTCCACCAACTCTTTaGCATTCTCAAAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PCPASCKIPEARATSSSTTPPTL*HSQKPG
Trigger: GCCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGT...TGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGACTCCACCAACTCTTTaGCATTCTCAAAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLTPPTL*HSQKPG
Trigger: GCCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGT...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGACGATCCTTCGCAAGTaGTTCAGCAGGTATAAGAGT +
Preference number: 4 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMTILRK*FSRYKS
Trigger: ACTCTTATACCTGCTGAAGCACTTGCGAAGGATCGT...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACCGAGAGCGGGAAGCCTaGTGCACTGGCATGGCGGCT +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHREREA*CTGMAA
Trigger: AGCCGCCATGCCAGTGCAGCAGGCTTCCCGCTCTCG...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATGGTCCTTCATGTACCTaGCCATGTCTTTTGCATACT +
Preference number: 4 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDGPSCT*PCLLHT
Trigger: AGTATGCAAAAGACATGGCCAGGTACATGAAGGACC...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCATTCCATCTCCAGGGTaGTCCTCTTCTCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGAIPSPG*SSSPGS
Trigger: GCTACCTGGAGAAGAGGACCACCCTGGAGATGGAAT...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGACAAGAGAGGCATGTaGGGCTCGTGTGTGACGCTC +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQDKRGM*GSCVTL
Trigger: GAGCGTCACACACGAGCCCCACATGCCTCTCTTGTC...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCTGCGGTAAGTGGCCATaGCCTCCTCGGCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPCGKWP*PPRPCF
Trigger: AAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCA...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGTGTCTGAGATGGAGATaGGCCAGGACTTATGAACCT +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGCLRWR*ARTYEP
Trigger: AGGTTCATAAGTCCTGGCCCATCTCCATCTCAGACA...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCTGTGGCCACACTGGATaGCCAGGGTCTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPCGHTG*PGSPNT
Trigger: AGTGTTTGGAGACCCTGGCCATCCAGTGTGGCCACA...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTACGTTGCTGATGTCGTaGGGTGAGGCCTGTGACAAC +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSTLLMS*GEACDN
Trigger: GTTGTCACAGGCCTCACCCCACGACATCAGCAACGT...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGCTCCTCGGAGCCGCATaGTGGGCAGAGGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGELLGAA*WAEGPV
Trigger: CACGGGCCCCTCTGCCCACCATGCGGCTCCGAGGAG...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTCCATTCTGCCTGGTGTaGACTATAGCTGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSPFCLV*TIAGPV
Trigger: AACCGGGCCAGCTATAGTCCACACCAGGCAGAATGG...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCACGGACACAGTGCAGCTaGAGGACACCGCAATGGTTT +
Preference number: 4 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPRTQCS*RTPQWF
Trigger: AAACCATTGCGGTGTCCTTCAGCTGCACTGTGTCCG...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGCGGGGTCCATGCCATTaGGGTCAGCTGAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQRGPCH*GQLNQR
Trigger: CCTTTGATTCAGCTGACCTCAATGGCATGGACCCCG...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGTCCAAACACTTTTTGTaGCAAGCCAGACAGCACTCT +
Preference number: 4 (lower is better)
Translates to: QPPARFLKPEPPPAPHTESKHFL*QARQHS
Trigger: AGAGTGCTGTCTGGCTTGTCACAAAAAGTGTTTGGA...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGACGATCCTTCGCAAGTaGTTCAGCAGGTATAAGAGT +
Preference number: 4 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGTILRK*FSRYKS
Trigger: ACTCTTATACCTGCTGAAGCACTTGCGAAGGATCGT...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGGACGATCCTTCGCAAGTaGTTCAGCAGGTATAAGAGT +
Preference number: 4 (lower is better)
Translates to: STHRGQGCTRSDTSRLMGTILRK*FSRYKS
Trigger: ACTCTTATACCTGCTGAAGCACTTGCGAAGGATCGT...CCCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGATGCCCCCTCCTGGCTaGCAGGCGCCTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGEMPPPG*QAPPLA
Trigger: AGCCAGAGGAGGCGCCTGGCAGCCAGGAGGGGGCAT...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCGGTCCTTCATGTACCTaGCCATGTCTTTTGCATACT +
Preference number: 4 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPGPSCT*PCLLHT
Trigger: AGTATGCAAAAGACATGGCCAGGTACATGAAGGACC...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGCTGCCACTATGGCTCTaGGGACCTTCCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLLPLWL*GPSSRP
Trigger: AGGCCTGGAGGAAGGTCCCCAGAGCCATAGTGGCAG...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACATGAAGGTCTGGGTCTaGAGTGTGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHMKVWV*SVPAAC
Trigger: GCAGGCAGCGGGCACACTGCAGACCCAGACCTTCAT...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGCGAAGTCGGTGTGTaGGGGCTGCCTTGGACAATC +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLCEVGV*GLPWTI
Trigger: GATTGTCCAAGGCAGCCCGCACACACCGACTTCGCA...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACGGCTGCATGAAGGTCTaGGTCTGCAGTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHGCMKV*VCSVPA
Trigger: AGCGGGCACACTGCAGACCCAGACCTTCATGCAGCC...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCGCATGTGCGGTAAGTaGCCATGGCCTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDRMCGK*PWPPRP
Trigger: AGGCCGAGGAGGCCATGGCCACTTACCGCACATGCG...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGCTCTCGCACAGCATCTaGAAGTTCACGGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLLSHSI*KFTGSG
Trigger: ACCGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAG...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACCCCTGTGGTCCTTGTTaGGTGCTGCCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHPCGPC*VLPQRC
Trigger: GCACCTCTGAGGCAGCACCCAACAAGGACCACAGGG...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTGTCTGAGATGGAGATaGGCCAGGACTTATGAACCT +
Preference number: 4 (lower is better)
Translates to: QATPSGTVIHLCPWYQGACLRWR*ARTYEP
Trigger: AGGTTCATAAGTCCTGGCCCATCTCCATCTCAGACA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCATTCTTGTGGCCACACTaGATGGCCAGGGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPFLWPH*MARVSK
Trigger: TTTGGAGACCCTGGCCATCCAGTGTGGCCACAAGAA...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGGTCCTTCATGTACCTaGCCATGTCTTTTGCATACT +
Preference number: 4 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGGPSCT*PCLLHT
Trigger: AGTATGCAAAAGACATGGCCAGGTACATGAAGGACC...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTTGGACAATCCCACATaGCGGAAGGGTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHLDNPT*RKGPLG
Trigger: GCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAA...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGGCCACACTGGATaGCCAGGGTCTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLCGHTG*PGSPNT
Trigger: AGTGTTTGGAGACCCTGGCCATCCAGTGTGGCCACA...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGGCCAGGCGCCTCCTCTaGCTCCTCCTCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGEARRLL*LLLKDQ
Trigger: CTGGTCTTTGAGGAGGAGCCAGAGGAGGCGCCTGGC...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACCAGCTCCTCACTGGATaGCATCGTCCCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHQLLTG*HRPTGR
Trigger: TCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTG...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGACTGGTGCCACCTGTaGTCTGCCCTCCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGDWCHL*SALLGA
Trigger: GGCTCCGAGGAGGGCAGATCACAGGTGGCACCAGTC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGGTGTCCTCCAGCTCCTaGTTCTGTGTCTTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLVSSSS*FCVFAS
Trigger: AGACGCAAAGACACAGAAGCAGGAGCTGGAGGACAC...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTCAAGTCCCCTGAGCTaGTGTCCAGACCAACTTCGG +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHSSPLS*CPDQLR
Trigger: CCGAAGTTGGTCTGGACACCAGCTCAGGGGACTTGA...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGACCTGCTGCACTGGCATaGCGGCTCAGGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGPAALA*RLRLVG
Trigger: ACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGG...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGGTAACTCTGCCGGACTaGCCGCAGAAAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGEVTLPD*PQKGGF
Trigger: GAAGCCCCCTTTCTGCGGCCAGTCCGGCAGAGTTAC...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACTTGGCCTCTGCCTCTTaGAGCTTCCTCTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDLASAS*SFLCAR
Trigger: TCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAA...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACGCCTGCACCATGCCGTaGCCAAACTCCAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHACTMP*PNSKSC
Trigger: ACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGC...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGACGCATGTGCGGTAAGTaGCCATGGCCTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGRMCGK*PWPPRP
Trigger: AGGCCGAGGAGGCCATGGCCACTTACCGCACATGCG...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACTTGTTCCAGGGCCAGTaGGTAGATGGACAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDLFQGQ*VDGQER
Trigger: CCTCTCTTGTCCATCTACTCACTGGCCCTGGAACAA...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGCGGGGTCCATGCCATTaGGGTCAGCTGAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGERGPCH*GQLNQR
Trigger: CCTTTGATTCAGCTGACCTCAATGGCATGGACCCCG...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAACTGGCGTCCGAGGATaGAAGGGGGTCAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGTGVRG*KGVRSV
Trigger: GACGCTTCTGACCCCCTTTCATCCTCGGACGCCAGT...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAATGAAGGTCTGGGTCTaGAGTGTGCCCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGMKVWV*SVPAAC
Trigger: GCAGGCAGCGGGCACACTGCAGACCCAGACCTTCAT...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGCGCAGGTTGGCCTCTaGCTCTTGCAGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGAQVGL*LLQLPL
Trigger: CAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGACCTCTTCCTCCAGTCTaGGCCTCTTGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGPLPPV*ASCPGP
Trigger: AGGCCCTGGACAAGAGGCGCAGACTGGAGGAAGAGG...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACATTCCATCTCCAGGGTaGTCCTCTTCTCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDIPSPG*SSSPGS
Trigger: GCTACCTGGAGAAGAGGACCACCCTGGAGATGGAAT...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGACTGTCCAATCCTTCCTaGGCAGCTCCCCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGLSNPS*AAPLRR
Trigger: CCTCCTCAGGGGAGCTGCCCAGGAAGGATTGGACAG...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099501.10
CDS-3UTR CCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGTAACTCTGCCGGACTaGCCGCAGAAAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGVTLPD*PQKGGF
Trigger: GAAGCCCCCTTTCTGCGGCCAGTCCGGCAGAGTTAC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGATGGTCCAGCGCTGGATaGAGAGTCCCACAGACACAC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGWSSAG*RVPQTH
Trigger: GTGTGTCTGTGGGACTCTGCATCCAGCGCTGGACCA...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043311.7
CDS-3UTR CCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGCACGGTGTTGAGGAGTaGGTATCTGGAGATGACCTG +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGEHGVEE*VSGDDL
Trigger: CAGGTCATCTCCAGATACCCACTCCTCAACACCGTG...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGATCCTCACTGCCACTATaGCTCTGGGGACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGSSLPL*LWGPSS
Trigger: GGAGGAAGGTCCCCAGAGCCATAGTGGCAGTGAGGA...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGTGTCTCCACGGTGTTaGGGAGTGGGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGVSPRC*GVGIWR
Trigger: TCTCCAGATACCCACTCCTCAACACCGTGGAGACAC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACACTCCACCAACTCTTTaGCATTCTCAAAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDTPPTL*HSQKPG
Trigger: GCCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGT...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGGGTCATATAGTTTGCTaGTCTCGCACAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGEGHIVC*SRTASG
Trigger: TCCAGATGCTGTGCGAGAGCAGCAAACTATATGACC...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR GCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGGTCATATAGTTTGCTaGTCTCGCACAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGGHIVC*SRTASG
Trigger: TCCAGATGCTGTGCGAGAGCAGCAAACTATATGACC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGATTGTGGACAACCTTCTaGAGACCTTTGGCGAATTCC +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGLWTTF*RPLANS
Trigger: GGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAA...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR TCA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGATCCAAACACTTTTTGTaGCAAGCCAGACAGCACTCT +
Preference number: 4 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGSKHFL*QARQHS
Trigger: AGAGTGCTGTCTGGCTTGTCACAAAAAGTGTTTGGA...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp TGGGCCAGTGGCCGGCGGGCCTCGAGAAGGTCTCGGGCGCGAGTCTaGCAGCACAGGGGGTCATGGTCCAGCGCTGGATGCAGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: WASGRRASRRSRARV*QHRGSWSSAGCRVP
Trigger: TGGGACTCTGCATCCAGCGCTGGACCATGACCCCCTGTGCTGCCAGACTCGCGCCCGAGACCTTCTCGAGGCCCGCCGGCCACTGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043311.7
CDS CCA 90 bp CTGGCGCATGACTCGCAGAGCTTCACCCAGGCACTCATGGGCCAGTaGCCGGCGGGCCTCGAGAAGGTCTCGGGCGCGAGTCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LAHDSQSFTQALMGQ*PAGLEKVSGASLAA
Trigger: TGCTGCCAGACTCGCGCCCGAGACCTTCTCGAGGCCCGCCGGCCACTGGCCCATGAGTGCCTGGGTGAAGCTCTGCGAGTCATGCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043311.7
CDS CCA 90 bp GCCTCCTCCTGCAGGGGGAAGACAATGCCCTCAGCAGACTCCAGCTaGCCACACTGGGTGGATGCCCCCTCCTGGCTGCCAGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASSCRGKTMPSADSS*PHWVDAPSWLPGAS
Trigger: GGAGGCGCCTGGCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGCAGGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp ACGGCCCAGGGTCCAGGTGGCAGTGCCCGAGAGCGGGAAGCCTGCTaGACTGGCATGGCGGCTCAGGCTGGTGGGTCTTTTGAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: TAQGPGGSAREREAC*TGMAAQAGGSFECP
Trigger: GGGACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGCCACCTGGACCCTGGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp GTGGCCGGCGGGCCTCGAGAAGGTCGTCCTGCAGCACACACTCCTTaGGCTTCTCCAAGCCCTCAGCAAAGCGGGCCACATCCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: VAGGPREGRPAAHTP*ASPSPQQSGPHPPA
Trigger: TGCTGGCGGATGTGGCCCGCTTTGCTGAGGGCTTGGAGAAGCTCAAGGAGTGTGTGCTGCAGGACGACCTTCTCGAGGCCCGCCGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GTCCAGGTGGCAGTGCCCGAGAGCGGGAAGCCTGCTGCACTGGCATaGCGGCTCAGGCTGGTGGGTCTTTTGAGTGTCCCTGTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: VQVAVPESGKPAALA*RLRLVGLLSVPVPL
Trigger: CAAGGGCACAGGGACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGCCACCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp CTACGCCATCAGGGAAAGCTCCCTCAGTGGGTAACTCTGCCGGACTaGCCGCAGAAAGGGGGCTTCGGTACCCACGGCCCAGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LRHQGKLPQWVTLPD*PQKGGFGTHGPGSR
Trigger: CCTGGACCCTGGGCCGTGGGTACCGAAGCCCCCTTTCTGCGGCCAGTCCGGCAGAGTTACCCACTGAGGGAGCTTTCCCTGATGGCGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp CTGGCGCATGACTCGCAGAGCTTCACCCAGGCACTCATGGGCCAGTaGCCGGCGGGCCTCGAGAAGGTCGTCCTGCAGCACACACTCCTT +
Preference number: 5 (lower is better)
Translates to: LAHDSQSFTQALMGQ*PAGLEKVVLQHTLL
Trigger: AAGGAGTGTGTGCTGCAGGACGACCTTCTCGAGGCCCGCCGGCCACTGGCCCATGAGTGCCTGGGTGAAGCTCTGCGAGTCATGCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp TGCTCCAACCGCCGCAGCGTCAGGGGCTGCATGAAGGTCTGGGTCTaGAGTGTGCCCGCTGCCTGCACCATGCCGTGGCCAAACTCCAAA +
Preference number: 5 (lower is better)
Translates to: CSNRRSVRGCMKVWV*SVPAACTMPWPNSK
Trigger: TTTGGAGTTTGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCGGCGGTTGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp GCACTTGGCTGGCGTGCGCAGTTTGCGAAGTCGGTGTGTGCGGGCTaGCTTGGACAATCCCACATGGCGGAAGGGTCCACTGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: ALGWRAQFAKSVCAG*LGQSHMAEGSTGHG
Trigger: GCCATGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCACGCCAGCCAAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp TGGCTGGCGTGCGCAGTTTGCGAAGTCGGTGTGTGCGGGCTGCCTTaGACAATCCCACATGGCGGAAGGGTCCACTGGGCATGGCCACAG +
Preference number: 5 (lower is better)
Translates to: WLACAVCEVGVCGLP*TIPHGGRVHWAWPQ
Trigger: CTGTGGCCATGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCACGCCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GAGTGTCCCTGTGCCCTTGGCTACCGTGGACAGGGATGTGGCTGGTaGCTCCAGGCCGGGAGCTTCTGTCCAATCCTTCCTGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: ECPCALGYRGQGCGW*LQAGSFCPILPGQL
Trigger: GAGCTGCCCAGGAAGGATTGGACAGAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGGACACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCCCCCTGTGGTCCTTGTaGGGTGCTGCCTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: CSLGETHCVPPPVCPCPAPLWSL*GAASEV
Trigger: CACCTCTGAGGCAGCACCCAACAAGGACCACAGGGG...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp GGAAGCCTGCTGCACTGGCATGGCGGCTCAGGCTGGTGGGTCTTTTaGGTGTCCCTGTGCCCTTGGCTACCGTGGACAGGGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GSLLHWHGGSGWWVF*VSLCPWLPWTGMWL
Trigger: CAGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGGACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp ATTCTCGGCTTCCGTCCTCTGCCTCCTCCTGCAGGGGGAAGACAATaGCCTCAGCAGACTCCAGCTGGCCACACTGGGTGGATGCCCCCT +
Preference number: 5 (lower is better)
Translates to: ILGFRPLPPPAGGRQ*PQQTPAGHTGWMPP
Trigger: AGGGGGCATCCACCCAGTGTGGCCAGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGCAGGAGGAGGCAGAGGACGGAAGCCGAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp CTCGGGCCTGGTGGGGATAATCCACCAGAGAAGAGAGGGACACGGTaGCGTCAGTGGGTCGAGGCCGCAACAGTGTGGGCCCGAAAACGA +
Preference number: 5 (lower is better)
Translates to: LGPGGDNPPEKRGTR*RQWVEAATVWARKR
Trigger: TCGTTTTCGGGCCCACACTGTTGCGGCCTCGACCCACTGACGCCACCGTGTCCCTCTCTTCTCTGGTGGATTATCCCCACCAGGCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGTGTTCCTCCTCAGCCTaGGCCACCTGGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: QPPARFLKPEPPPAPHTECSSSA*ATWSRA
Trigger: GGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAACA...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGTGTTCCTCCTCAGCCTaGGCCACCTGGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGCSSSA*ATWSRA
Trigger: GGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAACA...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp GGCAGAGGGGCCCGTGATGTGTTGTTGGACTGGTTGGTGTTGAAGTaGCACAGCCACGGACCCGGGGCTCCATCCTCACCCTCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GRGARDVLLDWLVLK*HSHGPGAPSSPSSC
Trigger: ACAGCTGGAGGGTGAGGATGGAGCCCCGGGTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCAACAACACATCACGGGCCCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp TGGTGGGCAGAGGGGCCCGTGATGTGTTGTTGGACTGGTTGGTGTTaGAGTGACACAGCCACGGACCCGGGGCTCCATCCTCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: WWAEGPVMCCWTGWC*SDTATDPGLHPHPP
Trigger: TGGAGGGTGAGGATGGAGCCCCGGGTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCAACAACACATCACGGGCCCCTCTGCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp CAGCGTCAGGGGCTGCATGAAGGTCTGGGTCTGCAGTGTGCCCGCTaGCTGCACCATGCCGTGGCCAAACTCCAAATCTTGTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QRQGLHEGLGLQCAR*LHHAVAKLQILFQG
Trigger: GCCCTGGAACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGACCTTCATGCAGCCCCTGACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp ACTCTCTGCACTTGGCTGGCGTGCGCAGTTTGCGAAGTCGGTGTGTaGGGGCTGCCTTGGACAATCCCACATGGCGGAAGGGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: TLCTWLACAVCEVGV*GLPWTIPHGGRVHW
Trigger: CCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCACGCCAGCCAAGTGCAGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp AGTTTGCGAAGTCGGTGTGTGCGGGCTGCCTTGGACAATCCCACATaGCGGAAGGGTCCACTGGGCATGGCCACAGGTAACTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SLRSRCVRAALDNPT*RKGPLGMATGNSGS
Trigger: GGACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp TTTGAGTGTCCCTGTGCCCTTGGCTACCGTGGACAGGGATGTGGCTaGTGGCTCCAGGCCGGGAGCTTCTGTCCAATCCTTCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FECPCALGYRGQGCG*WLQAGSFCPILPGQ
Trigger: CTGCCCAGGAAGGATTGGACAGAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGGACACTCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCTTGGCCTTGCGCAGGTaGGCCTCTGCCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFLALRR*ASASCS
Trigger: GCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAA...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCATGGGCCTGTGCCCTGTaGTTCCTCCTCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: YCSLGETHCVPPPVCPCPWACAL*FLLSLG
Trigger: GCCAAGGCTGAGGAGGAACAACAGGGCACAGGCCCA...TGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGGCAGCGCAGTCACCTTaGTGTCCTCCAGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQAAQSP*CPPAPA
Trigger: AGCAGGAGCTGGAGGACACAAAGGTGACTGCGCTGC...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGCCCCTGTGGTCCTTGTaGGGTGCTGCCTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMPLWSL*GAASEV
Trigger: CACCTCTGAGGCAGCACCCAACAAGGACCACAGGGG...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCGAGGAGGACTGCGGGTaGGGGCTCCCCGCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPEEDCG*GLPARF
Trigger: GAACCGCGCGGGGAGCCCCAACCCGCAGTCCTCCTC...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099501.10
CDS-3UTR CAA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCAGGCTGGTGGGTCTTTaGAGTGTCCCTGTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SLGETHCVPPPVCPCPASRLVGL*SVPVPL
Trigger: CAAGGGCACAGGGACACTCAAAAGACCCACCAGCCT...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp GTCAGGGGCTGCATGAAGGTCTGGGTCTGCAGTGTGCCCGCTGCCTaGACCATGCCGTGGCCAAACTCCAAATCTTGTTCCAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VRGCMKVWVCSVPAA*TMPWPNSKSCSRAS
Trigger: ACTGGCCCTGGAACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGACCTTCATGCAGCCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGTTGGCCTCTGCCTCTaGCAGCTTCCTCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: PPVCPCPASCKIPEARATVGLCL*QLPLCS
Trigger: CGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAAC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGTTGGCCTTGCGCAGGTaGGCCTCTGCCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: QPPARFLKPEPPPAPHTELALRR*ASASCS
Trigger: GCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAA...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGTGGGCCTGTGCCCTGTaGTTCCTCCTCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: QPPARFLKPEPPPAPHTEWACAL*FLLSLG
Trigger: GCCAAGGCTGAGGAGGAACAACAGGGCACAGGCCCA...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCGCAGCGCAGTCACCTTaGTGTCCTCCAGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PPVCPCPASCKIPEARATAAQSP*CPPAPA
Trigger: AGCAGGAGCTGGAGGACACAAAGGTGACTGCGCTGC...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGGGGGCCCGTGATGTGTaGTTGGACTGGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQGARDV*LDWLVL
Trigger: CAACACCAACCAGTCCAACAACACATCACGGGCCCC...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GCCGGGCCTTGTCGTGGTCTTCACAGCGTTGTTTGTAGCCCTGTTTaGCCTTGCGCAGGTTGGCCTCTGCCTCTTGCAGCTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AGPCRGLHSVVCSPV*PCAGWPLPLAASSV
Trigger: CACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACCACGACAAGGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GCTTCTGTGTCTTTGCGTCTGCCACGCATGTGCGGTAAGTGGCCATaGCCTCCTCGGCCTTGTTTTTGGCCTCTTCCTCCAGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: ASVSLRLPRMCGKWP*PPRPCFWPLPPVCA
Trigger: GGCGCAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCACATGCGTGGCAGACGCAAAGACACAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCACCTTCTGGAGACCTTaGGCGAATTCCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CSLGETHCVPPPVCPCPATFWRP*ANSISR
Trigger: CCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGT...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCTCCTCGGCCTTGTTTTaGGCCTCTTCCTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: PPPVCPCPASCKIPEARASSALF*ASSSSL
Trigger: CAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGGA...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCGAAGCATCACCAGGGTaGAAGCTGCCCTTCCGTGTA +
Preference number: 5 (lower is better)
Translates to: PPPVCPCPASCKIPEARAEASPG*KLPFRV
Trigger: TACACGGAAGGGCAGCTTCAACCCTGGTGATGCTTC...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGCCTGGCTGAAGTCTaGTCCAAAGAGCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPCLAEV*SKELQA
Trigger: CGCCTGCAGCTCTTTGGACAAGACTTCAGCCAGGCA...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCGCCCGTGATGTGTTGTaGGACTGGTTGGTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SLGETHCVPPPVCPCPASARDVL*DWLVLK
Trigger: CTTCAACACCAACCAGTCCAACAACACATCACGGGC...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCCATCCGCCAGCAGGGTaGAGATGTCTTCTACGCCAT +
Preference number: 5 (lower is better)
Translates to: PPPVCPCPASCKIPEARAHPPAG*RCLLRH
Trigger: ATGGCGTAGAAGACATCTCAACCCTGCTGGCGGATG...GGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp TCAGAAGCGTCTTCCAGCTCAGAGTCCGAGTCATTAGATGCCGCGTaGGATTCTCGGCTTCCGTCCTCTGCCTCCTCCTGCAGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SEASSSSESESLDAA*DSRLPSSASSCRGK
Trigger: CTTCCCCCTGCAGGAGGAGGCAGAGGACGGAAGCCGAGAATCTCACGCGGCATCTAATGACTCGGACTCTGAGCTGGAAGACGCTTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp TGTGCTCGATGCCAAGATTCTTTGATCTCCTTCCTGCGCCTCTCATaGTCCAACCGCCGCAGCGTCAGGGGCTGCATGAAGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: CARCQDSLISFLRLS*SNRRSVRGCMKVWV
Trigger: GACCCAGACCTTCATGCAGCCCCTGACGCTGCGGCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp GCTGACGCACGTGAGATGCGTACTGTTGGCCCGGGTCATATAGTTTaGTGCTCTCGCACAGCATCTGGAAGTTCACGGGCAGCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: ADAREMRTVGPGHIV*CSRTASGSSRAAVL
Trigger: CAGCACCGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAGCAGCAAACTATATGACCCGGGCCAACAGTACGCATCTCACGTGCGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp AAGGGGGTCAGAAGCGTCTTCCAGCTCAGAGTCCGAGTCATTAGATaGCGCGTGAGATTCTCGGCTTCCGTCCTCTGCCTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: KGVRSVFQLRVRVIR*RVRFSASVLCLLLQ
Trigger: CTGCAGGAGGAGGCAGAGGACGGAAGCCGAGAATCTCACGCGGCATCTAATGACTCGGACTCTGAGCTGGAAGACGCTTCTGACCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GTGAGTGTCTCCACGGTGTTGAGGAGTGGGTATCTGGAGATGACCTaGCGCATGACTCGCAGAGCTTCACCCAGGCACTCATGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VSVSTVLRSGYLEMT*RMTRRASPRHSWAS
Trigger: ACTGGCCCATGAGTGCCTGGGTGAAGCTCTGCGAGTCATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGAGACACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GCTCCTGCTTCTGTGTCTTTGCGTCTGCCACGCATGTGCGGTAAGTaGCCATGGCCTCCTCGGCCTTGTTTTTGGCCTCTTCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: APASVSLRLPRMCGK*PWPPRPCFWPLPPV
Trigger: GACTGGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCACATGCGTGGCAGACGCAAAGACACAGAAGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTTGGCCTTGCGCAGGTaGGCCTCTGCCTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: QATPSGTVIHLCPWYQGALALRR*ASASCS
Trigger: GCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGGTGGTCTTCACAGCGTaGTTTGTAGCCCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQVVFTA*FVALFG
Trigger: GCCAAACAGGGCTACAAACAACGCTGTGAAGACCAC...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGTGTTCCTCCTCAGCCTaGGCCACCTGGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQCSSSA*ATWSRA
Trigger: GGCCCGGCTCCAGGTGGCCAAGGCTGAGGAGGAACA...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCTCCTCGGCCTTGTTTTaGGCCTCTTCCTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: RPTVCPHPSVHVQPPARFSSALF*ASSSSL
Trigger: CAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGGA...GAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGATGGCCTCCTCGGCCTaGTTTTTGGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGMASSA*FLASSS
Trigger: GGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCAT...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATGAAGCATCACCAGGGTaGAAGCTGCCCTTCCGTGTA +
Preference number: 5 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDEASPG*KLPFRV
Trigger: TACACGGAAGGGCAGCTTCAACCCTGGTGATGCTTC...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTTACACTCTCTGCACTaGGCTGGCGTGCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PLLLLGRDPLCAPTRLSMLHSLH*AGVRSL
Trigger: CAAACTGCGCACGCCAGCCAAGTGCAGAGAGTGTAA...CATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGTGCCTGGCTGAAGTCTaGTCCAAAGAGCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGCLAEV*SKELQA
Trigger: CGCCTGCAGCTCTTTGGACAAGACTTCAGCCAGGCA...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGAGGCTGGTGGGTCTTTaGAGTGTCCCTGTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QPPARFLKPEPPPAPHTERLVGL*SVPVPL
Trigger: CAAGGGCACAGGGACACTCAAAAGACCCACCAGCCT...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCACATCCGCCAGCAGGGTaGAGATGTCTTCTACGCCAT +
Preference number: 5 (lower is better)
Translates to: LLYCSLGETHCVPPPVCPHPPAG*RCLLRH
Trigger: ATGGCGTAGAAGACATCTCAACCCTGCTGGCGGATG...TGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp CCTCTGCCTCTTGCAGCTTCCTCTGTGCTCGATGCCAAGATTCTTTaGTCTCCTTCCTGCGCCTCTCATGCTCCAACCGCCGCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: PLPLAASSVLDAKIL*SPSCASHAPTAAAS
Trigger: TGACGCTGCGGCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp AGGGTCCACTGGGCATGGCCACAGGTAACTCGGGGTCCATGCCATTaGGGTCAGCTGAATCAAAGGCGGAAGCTACCAAGCCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: RVHWAWPQVTRGPCH*GQLNQRRKLPSQLP
Trigger: AGGAAGCTGGCTTGGTAGCTTCCGCCTTTGATTCAGCTGACCTCAATGGCATGGACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp GACGCACGTGAGATGCGTACTGTTGGCCCGGGTCATATAGTTTGCTaGTCTCGCACAGCATCTGGAAGTTCACGGGCAGCGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: DAREMRTVGPGHIVC*SRTASGSSRAAVLS
Trigger: AGACAGCACCGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAGCAGCAAACTATATGACCCGGGCCAACAGTACGCATCTCACGTGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCACCTTCTGGAGACCTTaGGCGAATTCCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PPVCPCPASCKIPEARATTFWRP*ANSISR
Trigger: CCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGT...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGTTGGCCTCTGCCTCTaGCAGCTTCCTCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGVGLCL*QLPLCS
Trigger: CGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAAC...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGGAAGCATCACCAGGGTaGAAGCTGCCCTTCCGTGTA +
Preference number: 5 (lower is better)
Translates to: KAPLLLLGRDPLCAPTRLEASPG*KLPFRV
Trigger: TACACGGAAGGGCAGCTTCAACCCTGGTGATGCTTC...CAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCCCTGTGGTCCTTGTaGGGTGCTGCCTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPPLWSL*GAASEV
Trigger: CACCTCTGAGGCAGCACCCAACAAGGACCACAGGGG...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTTACACTCTCTGCACTaGGCTGGCGTGCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPLHSLH*AGVRSL
Trigger: CAAACTGCGCACGCCAGCCAAGTGCAGAGAGTGTAA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CTCCACACACAGAGGTCAGGGCTGTACCCGCTCAGACACATCCAGACTGATGGGTTACACTCTCTGCACTaGGCTGGCGTGCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LHTQRSGLYPLRHIQTDGLHSLH*AGVRSL
Trigger: CAAACTGCGCACGCCAGCCAAGTGCAGAGAGTGTAA...CCCATCAGTCTGGATGTGTCTGAGCGGGTACAGCCCTGACCTCTGTGTGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCAACTCCACCAACTCTTaGCCATTCTCAAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLGETHCVPPPVCPCPASNSTNS*PFSKAW
Trigger: CCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGTT...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGTATAGCTTTAGGACGTaGCTGATGTCGTGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: TAPWERPTVCPHPSVHVQYSFRT*LMSWGE
Trigger: CTCACCCCACGACATCAGCAACGTCCTAAAGCTATA...CTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp CTGCACCATGCCGTGGCCAAACTCCAAATCTTGTTCCAGGGCCAGTaGGTAGATGGACAAGAGAGGCATGTGGGGCTCGTGTGTGACGCT +
Preference number: 5 (lower is better)
Translates to: LHHAVAKLQILFQGQ*VDGQERHVGLVCDA
Trigger: AGCGTCACACACGAGCCCCACATGCCTCTCTTGTCCATCTACTCACTGGCCCTGGAACAAGATTTGGAGTTTGGCCACGGCATGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp CTCCAGGTAGCTGATGAGGTCCTTCATGTACCTGGCCATGTCTTTTaGATACTGCAGTGCAGCGTCCACACCCCCTTCGCATCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQVADEVLHVPGHVF*ILQCSVHTPFASLQ
Trigger: CTGCAGCGATGCGAAGGGGGTGTGGACGCTGCACTGCAGTATGCAAAAGACATGGCCAGGTACATGAAGGACCTCATCAGCTACCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp CCTTGTCGTGGTCTTCACAGCGTTGTTTGTAGCCCTGTTTGGCCTTaGGCAGGTTGGCCTCTGCCTCTTGCAGCTTCCTCTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: PCRGLHSVVCSPVWP*AGWPLPLAASSVLD
Trigger: ATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACCACGACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp AATGAGTGTACCAGCGGCTGTGAGTGTCTCCACGGTGTTGAGGAGTaGGTATCTGGAGATGACCTGGCGCATGACTCGCAGAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: NECTSGCECLHGVEE*VSGDDLAHDSQSFT
Trigger: GGTGAAGCTCTGCGAGTCATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGAGACACTCACAGCCGCTGGTACACTCATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp TGGGGCTCGTGTGTGACGCTCTGTCTGCAGTTGTGGACAACCTTCTaGAGACCTTTGGCGAATTCCATCTCCAGGGTGGTCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WGSCVTLCLQLWTTF*RPLANSISRVVLFS
Trigger: GGAGAAGAGGACCACCCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAGCGTCACACACGAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGTGGGCCTGTGCCCTGTaGTTCCTCCTCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQWACAL*FLLSLG
Trigger: GCCAAGGCTGAGGAGGAACAACAGGGCACAGGCCCA...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp GGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAATGGCCTCCTCGGCCTaGTTTTTGGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GQATPSGTVIHLCPWYQGMASSA*FLASSS
Trigger: GGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCAT...TCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TGCTCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCACAGACACATTTTTaGACAATGAAGGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: CSLGETHCVPPPVCPCPASQTHF*TMKGTP
Trigger: TGGGGTGCCCTTCATTGTCAAAAAATGTGTCTGTGA...GGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TCCTTGGGAGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTCACAGACACATTTTTaGACAATGAAGGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: SLGETHCVPPPVCPCPASSQTHF*TMKGTP
Trigger: TGGGGTGCCCTTCATTGTCAAAAAATGTGTCTGTGA...GGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCTCCCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCGGGGCCCGTGATGTGTaGTTGGACTGGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QATPSGTVIHLCPWYQGAGARDV*LDWLVL
Trigger: CAACACCAACCAGTCCAACAACACATCACGGGCCCC...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCCCCGCGCGGTTCTTTTaGGAAATAGAGGGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: PPVCPCPASCKIPEARATPARFF*EIEGVF
Trigger: GAAAACTCCCTCTATTTCCAAAAAGAACCGCGCGGG...GGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTGGACATGGACAGACGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099501.10
CDS GCA 90 bp GATGAGGTCCTTCATGTACCTGGCCATGTCTTTTGCATACTGCAGTaGAGCGTCCACACCCCCTTCGCATCGCTGCAGAAGCATGTCCAC +
Preference number: 5 (lower is better)
Translates to: DEVLHVPGHVFCILQ*SVHTPFASLQKHVH
Trigger: GTGGACATGCTTCTGCAGCGATGCGAAGGGGGTGTGGACGCTGCACTGCAGTATGCAAAAGACATGGCCAGGTACATGAAGGACCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp GGTCTTCACAGCGTTGTTTGTAGCCCTGTTTGGCCTTGCGCAGGTTaGCCTCTGCCTCTTGCAGCTTCCTCTGTGCTCGATGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: GLHSVVCSPVWPCAG*PLPLAASSVLDAKI
Trigger: AATCTTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTTGCCTGGCTGAAGTCTaGTCCAAAGAGCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSCLAEV*SKELQA
Trigger: CGCCTGCAGCTCTTTGGACAAGACTTCAGCCAGGCA...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGAGACCCACTGTGTGCCCCCACCCGTCTGTCCATGTCCAGCCTCCTGCAAGATAACTCCACCAACTCTTaGCCATTCTCAAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: RDPLCAPTRLSMSSLLQDNSTNS*PFSKAW
Trigger: CCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGTT...ATCTTGCAGGAGGCTGGACATGGACAGACGGGTGGGGGCACACAGTGGGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp GTACCAGGGAGCCCTGATCTCCCTGAAGTTCCTCGGCATTGTGAGGAACACCCCTATAGCTTTAGGACGTaGCTGATGTCGTGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: VPGSPDLPEVPRHCEEHPYSFRT*LMSWGE
Trigger: CTCACCCCACGACATCAGCAACGTCCTAAAGCTATA...GGGGTGTTCCTCACAATGCCGAGGAACTTCAGGGAGATCAGGGCTCCCTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp TTGAGGTCAGCTGAATCAAAGGCGGAAGCTACCAAGCCAGCTTCCTaGTCCCCCAGCTCCTCACTGGATGACATCGTCCCACTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LRSAESKAEATKPAS*SPSSSLDDIVPLED
Trigger: ATCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTGGTAGCTTCCGCCTTTGATTCAGCTGACCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp TCCCACTGGAAGATGTTCGATCGAACTTCTTCAAGTCCCCTGAGCTaGTGTCCAGACCAACTTCGGTGTCTGAGATGGAGATGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SHWKMFDRTSSSPLS*CPDQLRCLRWRWAR
Trigger: CCTGGCCCATCTCCATCTCAGACACCGAAGTTGGTCTGGACACCAGCTCAGGGGACTTGAAGAAGTTCGATCGAACATCTTCCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp CAGCTTCCTGATCCCCCAGCTCCTCACTGGATGACATCGTCCCACTaGAAGATGTTCGATCGAACTTCTTCAAGTCCCCTGAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: QLPDPPAPHWMTSSH*KMFDRTSSSPLSWC
Trigger: ACACCAGCTCAGGGGACTTGAAGAAGTTCGATCGAACATCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTGGGGGATCAGGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 90 bp TCCGGTAGCTGCCGCAGGTATAGCTTTAGGACGTTGCTGATGTCGTaGGGTGAGGCCTGTGACAACTCCACCAACTCTTTGCCATTCTCA +
Preference number: 5 (lower is better)
Translates to: SGSCRRYSFRTLLMS*GEACDNSTNSLPFS
Trigger: TGAGAATGGCAAAGAGTTGGTGGAGTTGTCACAGGCCTCACCCCACGACATCAGCAACGTCCTAAAGCTATACCTGCGGCAGCTACCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGATGGCCTCCTCGGCCTaGTTTTTGGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGQATPSGTVIHLCPWYQMASSA*FLASSS
Trigger: GGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCAT...CTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGCCTCCTGCAAGATTCCTGAAGCCAGAGCCACCTCCAGCTCCACACACAGAGAACTCCACCAACTCTTaGCCATTCTCAAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: QPPARFLKPEPPPAPHTENSTNS*PFSKAW
Trigger: CCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGTT...CTCTGTGTGTGGAGCTGGAGGTGGCTCTGGCTTCAGGAATCTTGCAGGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp GGGGTCATCTTGTTATCCTGCTCCATTTCCACGATCCTTCGCAAGTaGTTCAGCAGGTATAAGAGTGTGGCCCGGTTTTCGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: GVILLSCSISTILRK*FSRYKSVARFSAGR
Trigger: TCTGCCAGCCGAAAACCGGGCCACACTCTTATACCTGCTGAAGCACTTGCGAAGGATCGTGGAAATGGAGCAGGATAACAAGATGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 90 bp GGCCCGAAAACGATGCCCAGGTTCCCAGGGGTCATCTTGTTATCCTaGTCCATTTCCACGATCCTTCGCAAGTGCTTCAGCAGGTATAAG +
Preference number: 5 (lower is better)
Translates to: GPKTMPRFPGVILLS*SISTILRKCFSRYK
Trigger: CTTATACCTGCTGAAGCACTTGCGAAGGATCGTGGAAATGGAGCAGGATAACAAGATGACCCCTGGGAACCTGGGCATCGTTTTCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTACCTTCTGGAGACCTTaGGCGAATTCCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSTFWRP*ANSISR
Trigger: CCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGT...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp ATCCCCACAGGCACACAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGGTCTTCACAGCGTaGTTTGTAGCCCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: IPTGTQRPGNSIWDCYPSVVFTA*FVALFG
Trigger: GCCAAACAGGGCTACAAACAACGCTGTGAAGACCAC...AGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTGTGTGCCTGTGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAAAGGCCAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCATCCTCGGCCTTGTTTTaGGCCTCTTCCTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: QRPGNSIWDCYPSVSMVPSSALF*ASSSSL
Trigger: CAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGGA...TGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCCCTATAGCTTTAGGACGTaGCTGATGTCGTGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: FMWKAPLLLLGRDPLCAPYSFRT*LMSWGE
Trigger: CTCACCCCACGACATCAGCAACGTCCTAAAGCTATA...GGGGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACGTTGGCCTCTGCCTCTaGCAGCTTCCTCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDVGLCL*QLPLCS
Trigger: CGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAAC...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 90 bp TTCTTGTGGCCACACTGGATGGCCAGGGTCTCCAAACACTTTTTGTaGCAAGCCAGACAGCACTCTTCACATTCAGCTCCTTGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: FLWPHWMARVSKHFL*QARQHSSHSAPWKY
Trigger: GTACTTCCAAGGAGCTGAATGTGAAGAGTGCTGTCTGGCTTGTCACAAAAAGTGTTTGGAGACCCTGGCCATCCAGTGTGGCCACAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAGGCAACTCCATCTGGGACTGTTATCCATCTGTGTCCATGGTACCAGGGAGCCTTCACATTCAGCTCCTaGGAAGTACACATAGCTGTT +
Preference number: 5 (lower is better)
Translates to: QATPSGTVIHLCPWYQGAFTFSS*EVHIAV
Trigger: AACAGCTATGTGTACTTCCAAGGAGCTGAATGTGAA...GGCTCCCTGGTACCATGGACACAGATGGATAACAGTCCCAGATGGAGTTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGGCCCGTGATGTGTTGTaGGACTGGTTGGTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLARDVL*DWLVLK
Trigger: CTTCAACACCAACCAGTCCAACAACACATCACGGGC...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp CAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACGGGGCCCGTGATGTGTaGTTGGACTGGTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QENCEFMWKAPLLLLGRDGARDV*LDWLVL
Trigger: CAACACCAACCAGTCCAACAACACATCACGGGCCCC...GTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACACGCTCTGTCTGCAGTaGTGGACAACCTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: KIVSSCGKLLYCSLGETHTLCLQ*WTTFWR
Trigger: TCTCCAGAAGGTTGTCCACAACTGCAGACAGAGCGT...GTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTGTGCCCTTCACATTCAGCTCCTaGGAAGTACACATAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SSCGKLLYCSLGETHCVPFTFSS*EVHIAV
Trigger: AACAGCTATGTGTACTTCCAAGGAGCTGAATGTGAA...GGGCACACAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGCAGCGCAGTCACCTTaGTGTCCTCCAGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGAAQSP*CPPAPA
Trigger: AGCAGGAGCTGGAGGACACAAAGGTGACTGCGCTGC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGGTGGTCTTCACAGCGTaGTTTGTAGCCCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: FKKIVSSCGKLLYCSLGEVVFTA*FVALFG
Trigger: GCCAAACAGGGCTACAAACAACGCTGTGAAGACCAC...CTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp AATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGAGACCCACTGTCACAGACACATTTTTaGACAATGAAGGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: NCEFMWKAPLLLLGRDPLSQTHF*TMKGTP
Trigger: TGGGGTGCCCTTCATTGTCAAAAAATGTGTCTGTGA...CAGTGGGTCTCTCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAACGCTCTGTCTGCAGTaGTGGACAACCTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGTLCLQ*WTTFWR
Trigger: TCTCCAGAAGGTTGTCCACAACTGCAGACAGAGCGT...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS-3UTR CAA 90 bp TATTTCAAGAAAATTGTGAGTTCATGTGGAAAGCTCCTTTACTGCTCCTTGGGAGCCCGTGATGTGTTGTaGGACTGGTTGGTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: YFKKIVSSCGKLLYCSLGARDVL*DWLVLK
Trigger: CTTCAACACCAACCAGTCCAACAACACATCACGGGC...TCCCAAGGAGCAGTAAAGGAGCTTTCCACATGAACTCACAATTTTCTTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GGCTTCGGTACCCACGGCCCAGGGTCCAGGTGGCAGTaGCCGAGAGCGGGAAGCCTGCTGCACTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: GFGTHGPGSRWQ*PRAGSLLHWHG
Trigger: GCCATGCCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGCCACCTGGACCCTGGGCCGTGGGTACCGAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp CGCCGCAGCGTCAGGGGCTGCATGAAGGTCTGGGTCTaGAGTGTGCCCGCTGCCTGCACCATGCCGTGGCCA +
Preference number: 6 (lower is better)
Translates to: RRSVRGCMKVWV*SVPAACTMPWP
Trigger: TGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GACTCGCAGAGCTTCACCCAGGCACTCATGGGCCAGTaGCCGGCGGGCCTCGAGAAGGTCTCGGGCGCGAGT +
Preference number: 6 (lower is better)
Translates to: DSQSFTQALMGQ*PAGLEKVSGAS
Trigger: ACTCGCGCCCGAGACCTTCTCGAGGCCCGCCGGCCACTGGCCCATGAGTGCCTGGGTGAAGCTCTGCGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043311.7
CDS CCA 72 bp AAAGGGGGCTTCGGTACCCACGGCCCAGGGTCCAGGTaGCAGTGCCCGAGAGCGGGAAGCCTGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: KGGFGTHGPGSR*QCPRAGSLLHW
Trigger: CCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGCCACCTGGACCCTGGGCCGTGGGTACCGAAGCCCCCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp CGCCTCTCATGCTCCAACCGCCGCAGCGTCAGGGGCTaGATGAAGGTCTGGGTCTGCAGTGTGCCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: RLSCSNRRSVRG*MKVWVCSVPAA
Trigger: GGCAGCGGGCACACTGCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCGGCGGTTGGAGCATGAGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GCGCCTCTTGTCCAGGGCCTTAGAGGCCGCAGTCCCTaGGCCTGGGCCTGTGCCCTGTTGTTCCTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: APLVQGLRGRSP*AWACALLFLLS
Trigger: GCTGAGGAGGAACAACAGGGCACAGGCCCAGGCGCAGGGACTGCGGCCTCTAAGGCCCTGGACAAGAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TCCAACCGCCGCAGCGTCAGGGGCTGCATGAAGGTCTaGGTCTGCAGTGTGCCCGCTGCCTGCACCATGCCG +
Preference number: 6 (lower is better)
Translates to: SNRRSVRGCMKV*VCSVPAACTMP
Trigger: CGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGACCTTCATGCAGCCCCTGACGCTGCGGCGGTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GACTCCAGCTGGCCACACTGGGTGGATGCCCCCTCCTaGCTGCCAGGCGCCTCCTCTGGCTCCTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: DSSWPHWVDAPS*LPGASSGSSSK
Trigger: CTTTGAGGAGGAGCCAGAGGAGGCGCCTGGCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GTGGCTCCAGGCCGGGAGCTTCTGTCCAATCCTTCCTaGGCAGCTCCCCTGAGGAGGACTGCGGGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: VAPGRELLSNPS*AAPLRRTAGWG
Trigger: GCCCCAACCCGCAGTCCTCCTCAGGGGAGCTGCCCAGGAAGGATTGGACAGAAGCTCCCGGCCTGGAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099501.10
CDS GCA 72 bp GGTCCAGGTGGCAGTGCCCGAGAGCGGGAAGCCTGCTaGACTGGCATGGCGGCTCAGGCTGGTGGGTCTTTT +
Preference number: 6 (lower is better)
Translates to: GPGGSAREREAC*TGMAAQAGGSF
Trigger: AAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGCCACCTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CCGTGCCAGCCCCATAAAGGTTCTCCATGGACTGGCTaGGGTCCCCCGGAGGCACCGCCAGGAGAGTACTGC +
Preference number: 6 (lower is better)
Translates to: PCQPHKGSPWTG*GPPEAPPGEYC
Trigger: GCAGTACTCTCCTGGCGGTGCCTCCGGGGGACCCCAGCCAGTCCATGGAGAACCTTTATGGGGCTGGCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CTTGTCCAGGGCCTTAGAGGCCGCAGTCCCTGCGCCTaGGCCTGTGCCCTGTTGTTCCTCCTCAGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: LVQGLRGRSPCA*ACALLFLLSLG
Trigger: GCCAAGGCTGAGGAGGAACAACAGGGCACAGGCCCAGGCGCAGGGACTGCGGCCTCTAAGGCCCTGGACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp AAGACAATGCCCTCAGCAGACTCCAGCTGGCCACACTaGGTGGATGCCCCCTCCTGGCTGCCAGGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: KTMPSADSSWPH*VDAPSWLPGAS
Trigger: GGAGGCGCCTGGCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGAGTCTGCTGAGGGCATTGTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp TGGCTCTGGGGACCTTCCTCCAGGCCTGCCTCGGTCTaGTCCAGGAAACTGAGGCGGTGTAGAGCACTGGCG +
Preference number: 6 (lower is better)
Translates to: WLWGPSSRPASV*SRKLRRCRALA
Trigger: CGCCAGTGCTCTACACCGCCTCAGTTTCCTGGAGCAGACCGAGGCAGGCCTGGAGGAAGGTCCCCAGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp AGGTCTCGGGCGCGAGTCTGGCAGCACAGGGGGTCATaGTCCAGCGCTGGATGCAGAGTCCCACAGACACAC +
Preference number: 6 (lower is better)
Translates to: RSRARVWQHRGS*SSAGCRVPQTH
Trigger: GTGTGTCTGTGGGACTCTGCATCCAGCGCTGGACCATGACCCCCTGTGCTGCCAGACTCGCGCCCGAGACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043311.7
CDS CCA 72 bp TGCAGGGGGAAGACAATGCCCTCAGCAGACTCCAGCTaGCCACACTGGGTGGATGCCCCCTCCTGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: CRGKTMPSADSS*PHWVDAPSWLP
Trigger: TGGCAGCCAGGAGGGGGCATCCACCCAGTGTGGCCAGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GCAGTGCCCGAGAGCGGGAAGCCTGCTGCACTGGCATaGCGGCTCAGGCTGGTGGGTCTTTTGAGTGTCCCT +
Preference number: 6 (lower is better)
Translates to: AVPESGKPAALA*RLRLVGLLSVP
Trigger: AGGGACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCCCGCTCTCGGGCACTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CAGGGAAAGCTCCCTCAGTGGGTAACTCTGCCGGACTaGCCGCAGAAAGGGGGCTTCGGTACCCACGGCCCA +
Preference number: 6 (lower is better)
Translates to: QGKLPQWVTLPD*PQKGGFGTHGP
Trigger: TGGGCCGTGGGTACCGAAGCCCCCTTTCTGCGGCCAGTCCGGCAGAGTTACCCACTGAGGGAGCTTTCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp TTCCGTCCTCTGCCTCCTCCTGCAGGGGGAAGACAATaGCCTCAGCAGACTCCAGCTGGCCACACTGGGTGG +
Preference number: 6 (lower is better)
Translates to: FRPLPPPAGGRQ*PQQTPAGHTGW
Trigger: CCACCCAGTGTGGCCAGCTGGAGTCTGCTGAGGGCATTGTCTTCCCCCTGCAGGAGGAGGCAGAGGACGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GGTGGGGATAATCCACCAGAGAAGAGAGGGACACGGTaGCGTCAGTGGGTCGAGGCCGCAACAGTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: GGDNPPEKRGTR*RQWVEAATVWA
Trigger: GGCCCACACTGTTGCGGCCTCGACCCACTGACGCCACCGTGTCCCTCTCTTCTCTGGTGGATTATCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CCCTGTGCCCTTGGCTACCGTGGACAGGGATGTGGCTaGTGGCTCCAGGCCGGGAGCTTCTGTCCAATCCTT +
Preference number: 6 (lower is better)
Translates to: PCALGYRGQGCG*WLQAGSFCPIL
Trigger: AAGGATTGGACAGAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GTGTCCCTGTGCCCTTGGCTACCGTGGACAGGGATGTaGCTGGTGGCTCCAGGCCGGGAGCTTCTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: VSLCPWLPWTGM*LVAPGRELLSN
Trigger: ATTGGACAGAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp GTGCGCAGTTTGCGAAGTCGGTGTGTGCGGGCTGCCTaGGACAATCCCACATGGCGGAAGGGTCCACTGGGC +
Preference number: 6 (lower is better)
Translates to: VRSLRSRCVRAA*DNPTWRKGPLG
Trigger: GCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp GCTGCACTGGCATGGCGGCTCAGGCTGGTGGGTCTTTaGAGTGTCCCTGTGCCCTTGGCTACCGTGGACAGG +
Preference number: 6 (lower is better)
Translates to: AALAWRLRLVGL*SVPVPLATVDR
Trigger: CCTGTCCACGGTAGCCAAGGGCACAGGGACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp TTGGCTGGCGTGCGCAGTTTGCGAAGTCGGTGTGTGCGGGCTGCCTaGGACAATCCCACATGGCGGAAGGGTCCACTGGGCATGGCCACA +
Preference number: 6 (lower is better)
Translates to: LAGVRSLRSRCVRAA*DNPTWRKGPLGMAT
Trigger: TGTGGCCATGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCACGCCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp GGGAAGCCTGCTGCACTGGCATGGCGGCTCAGGCTGGTGGGTCTTTaGAGTGTCCCTGTGCCCTTGGCTACCGTGGACAGGGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: GKPAALAWRLRLVGL*SVPVPLATVDRDVA
Trigger: AGCCACATCCCTGTCCACGGTAGCCAAGGGCACAGGGACACTCAAAAGACCCACCAGCCTGAGCCGCCATGCCAGTGCAGCAGGCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp AGCCTTGGCCACCTGGAGCCGGGCCTTGTCGTGGTCTTCACAGCGTaGTTTGTAGCCCTGTTTGGCCTTGCGCAGGTTGGCCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SLGHLEPGLVVVFTA*FVALFGLAQVGLCL
Trigger: GAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACCACGACAAGGCCCGGCTCCAGGTGGCCAAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp CCTGGCACAGCTTCTCCACACGCGTTTTCACGCCATTaGCCCGGTAGATCCCCTTGGTGTGCAGTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: PGTASPHAFSRH*PGRSPWCAVPA
Trigger: GGCGGGCACTGCACACCAAGGGGATCTACCGGGTCAATGGCGTGAAAACGCGTGTGGAGAAGCTGTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp ACTTGGCTGGCGTGCGCAGTTTGCGAAGTCGGTGTGTaGGGGCTGCCTTGGACAATCCCACATGGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: TWLACAVCEVGV*GLPWTIPHGGR
Trigger: CCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCACGCCAGCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp AGTCGGTGTGTGCGGGCTGCCTTGGACAATCCCACATaGCGGAAGGGTCCACTGGGCATGGCCACAGGTAAC +
Preference number: 6 (lower is better)
Translates to: SRCVRAALDNPT*RKGPLGMATGN
Trigger: GTTACCTGTGGCCATGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGCGCAGTTTGCGAAGTCGGTGTGTGCGGGCTGCCTTaGACAATCCCACATGGCGGAAGGGTCCACTGGGCA +
Preference number: 6 (lower is better)
Translates to: CAVCEVGVCGLP*TIPHGGRVHWA
Trigger: TGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAGCCCGCACACACCGACTTCGCAAACTGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGTGCCCTTGGCTACCGTGGACAGGGATGTGGCTGGTaGCTCCAGGCCGGGAGCTTCTGTCCAATCCTTCCT +
Preference number: 6 (lower is better)
Translates to: CALGYRGQGCGW*LQAGSFCPILP
Trigger: AGGAAGGATTGGACAGAAGCTCCCGGCCTGGAGCCACCAGCCACATCCCTGTCCACGGTAGCCAAGGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp GCCCGTGATGTGTTGTTGGACTGGTTGGTGTTGAAGTaGCACAGCCACGGACCCGGGGCTCCATCCTCACCC +
Preference number: 6 (lower is better)
Translates to: ARDVLLDWLVLK*HSHGPGAPSSP
Trigger: GGGTGAGGATGGAGCCCCGGGTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCAACAACACATCACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp GAGGGGCCCGTGATGTGTTGTTGGACTGGTTGGTGTTaGAGTGACACAGCCACGGACCCGGGGCTCCATCCT +
Preference number: 6 (lower is better)
Translates to: EGPVMCCWTGWC*SDTATDPGLHP
Trigger: AGGATGGAGCCCCGGGTCCGTGGCTGTGTCACTTCAACACCAACCAGTCCAACAACACATCACGGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp GCCCTCAGCAAAGCGGGCCACATCCGCCAGCAGGGTTaGGATGTCTTCTACGCCATCAGGGAAAGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: ALSKAGHIRQQG*DVFYAIRESSL
Trigger: GAGGGAGCTTTCCCTGATGGCGTAGAAGACATCTCAACCCTGCTGGCGGATGTGGCCCGCTTTGCTGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp AGGTCTGGGTCTGCAGTGTGCCCGCTGCCTGCACCATaGCGTGGCCAAACTCCAAATCTTGTTCCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: RSGSAVCPLPAP*RGQTPNLVPGP
Trigger: TGGCCCTGGAACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp TGCCGCAGCGCAGTCACCTTTGTGTCCTCCAGCTCCTaGTTCTGTGTCTTTGCGTCTGCCACGCATGTGCGG +
Preference number: 6 (lower is better)
Translates to: CRSAVTFVSSSS*FCVFASATHVR
Trigger: CCGCACATGCGTGGCAGACGCAAAGACACAGAAGCAGGAGCTGGAGGACACAAAGGTGACTGCGCTGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GACAATGAAGGGCACCCCATCAGGGGTGCTGAGGGCTaGCTGGCTGAAGTCTTGTCCAAAGAGCTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: DNEGHPIRGAEG*LAEVLSKELQA
Trigger: CGCCTGCAGCTCTTTGGACAAGACTTCAGCCAGGCAGCCCTCAGCACCCCTGATGGGGTGCCCTTCATTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGGGTCTGCAGTGTGCCCGCTGCCTGCACCATGCCGTaGCCAAACTCCAAATCTTGTTCCAGGGCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: WVCSVPAACTMP*PNSKSCSRASE
Trigger: CTCACTGGCCCTGGAACAAGATTTGGAGTTTGGCCACGGCATGGTGCAGGCAGCGGGCACACTGCAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGCGGTAAGTGGCCATGGCCTCCTCGGCCTTGTTTTTaGCCTCTTCCTCCAGTCTGCGCCTCTTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: CGKWPWPPRPCF*PLPPVCASCPG
Trigger: CCCTGGACAAGAGGCGCAGACTGGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CTGCCTTGGACAATCCCACATGGCGGAAGGGTCCACTaGGCATGGCCACAGGTAACTCGGGGTCCATGCCAT +
Preference number: 6 (lower is better)
Translates to: LPWTIPHGGRVH*AWPQVTRGPCH
Trigger: ATGGCATGGACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCTTCCGCCATGTGGGATTGTCCAAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp AATCCACCAGAGAAGAGAGGGACACGGTGGCGTCAGTaGGTCGAGGCCGCAACAGTGTGGGCCCGAAAACGA +
Preference number: 6 (lower is better)
Translates to: NPPEKRGTRWRQ*VEAATVWARKR
Trigger: TCGTTTTCGGGCCCACACTGTTGCGGCCTCGACCCACTGACGCCACCGTGTCCCTCTCTTCTCTGGTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp CACCTGGAGCCGGGCCTTGTCGTGGTCTTCACAGCGTaGTTTGTAGCCCTGTTTGGCCTTGCGCAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: HLEPGLVVVFTA*FVALFGLAQVG
Trigger: GCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACCACGACAAGGCCCGGCTCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp ACCAGCGGCTGTGAGTGTCTCCACGGTGTTGAGGAGTaGGTATCTGGAGATGACCTGGCGCATGACTCGCAG +
Preference number: 6 (lower is better)
Translates to: TSGCECLHGVEE*VSGDDLAHDSQ
Trigger: CTGCGAGTCATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGAGACACTCACAGCCGCTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp GGCTCCGGTAGCTGCCGCAGGTATAGCTTTAGGACGTaGCTGATGTCGTGGGGTGAGGCCTGTGACAACTCC +
Preference number: 6 (lower is better)
Translates to: GSGSCRRYSFRT*LMSWGEACDNS
Trigger: GGAGTTGTCACAGGCCTCACCCCACGACATCAGCAACGTCCTAAAGCTATACCTGCGGCAGCTACCGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp AGCCCTCAGCAAAGCGGGCCACATCCGCCAGCAGGGTaGAGATGTCTTCTACGCCATCAGGGAAAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SPQQSGPHPPAG*RCLLRHQGKLP
Trigger: AGGGAGCTTTCCCTGATGGCGTAGAAGACATCTCAACCCTGCTGGCGGATGTGGCCCGCTTTGCTGAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp GCCTCTGCCTCTTGCAGCTTCCTCTGTGCTCGATGCCAAGATTCTTaGATCTCCTTCCTGCGCCTCTCATGCTCCAACCGCCGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: ASASCSFLCARCQDS*ISFLRLSCSNRRSV
Trigger: GACGCTGCGGCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp GCTTCTCCAAGCCCTCAGCAAAGCGGGCCACATCCGCCAGCAGGGTaGAGATGTCTTCTACGCCATCAGGGAAAGCTCCCTCAGTGGGTA +
Preference number: 6 (lower is better)
Translates to: ASPSPQQSGPHPPAG*RCLLRHQGKLPQWV
Trigger: TACCCACTGAGGGAGCTTTCCCTGATGGCGTAGAAGACATCTCAACCCTGCTGGCGGATGTGGCCCGCTTTGCTGAGGGCTTGGAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp AAGGGTCCACTGGGCATGGCCACAGGTAACTCGGGGTCCATGCCATaGAGGTCAGCTGAATCAAAGGCGGAAGCTACCAAGCCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: KGPLGMATGNSGSMP*RSAESKAEATKPAS
Trigger: GGAAGCTGGCTTGGTAGCTTCCGCCTTTGATTCAGCTGACCTCAATGGCATGGACCCCGAGTTACCTGTGGCCATGCCCAGTGGACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp CCGGTAGCTGCCGCAGGTATAGCTTTAGGACGTTGCTaGTGTCGTGGGGTGAGGCCTGTGACAACTCCACCA +
Preference number: 6 (lower is better)
Translates to: PVAAAGIALGRC*CRGVRPVTTPP
Trigger: TGGTGGAGTTGTCACAGGCCTCACCCCACGACATCAGCAACGTCCTAAAGCTATACCTGCGGCAGCTACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp TGCCAAGATTCTTTGATCTCCTTCCTGCGCCTCTCATaGTCCAACCGCCGCAGCGTCAGGGGCTGCATGAAG +
Preference number: 6 (lower is better)
Translates to: CQDSLISFLRLS*SNRRSVRGCMK
Trigger: CTTCATGCAGCCCCTGACGCTGCGGCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TCCACGGTGTTGAGGAGTGGGTATCTGGAGATGACCTaGCGCATGACTCGCAGAGCTTCACCCAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: STVLRSGYLEMT*RMTRRASPRHS
Trigger: TGAGTGCCTGGGTGAAGCTCTGCGAGTCATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TCTTTGCGTCTGCCACGCATGTGCGGTAAGTGGCCATaGCCTCCTCGGCCTTGTTTTTGGCCTCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SLRLPRMCGKWP*PPRPCFWPLPP
Trigger: TGGAGGAAGAGGCCAAAAACAAGGCCGAGGAGGCCATGGCCACTTACCGCACATGCGTGGCAGACGCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CCCGGGTCATATAGTTTGCTGCTCTCGCACAGCATCTaGAAGTTCACGGGCAGCGGTGCTGTCTGCATGTGC +
Preference number: 6 (lower is better)
Translates to: PGSYSLLLSHSI*KFTGSGAVCMC
Trigger: GCACATGCAGACAGCACCGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAGCAGCAAACTATATGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp CTACCAGCAGCTTCGGGTCCTGAAGCATCACCAGGGTaGAAGCTGCCCTTCCGTGTACGCATGATTGGGGAC +
Preference number: 6 (lower is better)
Translates to: LPAASGPEASPG*KLPFRVRMIGD
Trigger: GTCCCCAATCATGCGTACACGGAAGGGCAGCTTCAACCCTGGTGATGCTTCAGGACCCGAAGCTGCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp ACCTTGGCAATGAGTGTACCAGCGGCTGTGAGTGTCTCCACGGTGTaGAGGAGTGGGTATCTGGAGATGACCTGGCGCATGACTCGCAGA +
Preference number: 6 (lower is better)
Translates to: TLAMSVPAAVSVSTV*RSGYLEMTWRMTRR
Trigger: TCTGCGAGTCATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGAGACACTCACAGCCGCTGGTACACTCATTGCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp GAGATAAGGGGCTCCGGTAGCTGCCGCAGGTATAGCTTTAGGACGTaGCTGATGTCGTGGGGTGAGGCCTGTGACAACTCCACCAACTCT +
Preference number: 6 (lower is better)
Translates to: EIRGSGSCRRYSFRT*LMSWGEACDNSTNS
Trigger: AGAGTTGGTGGAGTTGTCACAGGCCTCACCCCACGACATCAGCAACGTCCTAAAGCTATACCTGCGGCAGCTACCGGAGCCCCTTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp GCCGTGGCCAAACTCCAAATCTTGTTCCAGGGCCAGTaGGTAGATGGACAAGAGAGGCATGTGGGGCTCGTG +
Preference number: 6 (lower is better)
Translates to: AVAKLQILFQGQ*VDGQERHVGLV
Trigger: CACGAGCCCCACATGCCTCTCTTGTCCATCTACTCACTGGCCCTGGAACAAGATTTGGAGTTTGGCCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp GCTGAATCAAAGGCGGAAGCTACCAAGCCAGCTTCCTaGTCCCCCAGCTCCTCACTGGATGACATCGTCCCA +
Preference number: 6 (lower is better)
Translates to: AESKAEATKPAS*SPSSSLDDIVP
Trigger: TGGGACGATGTCATCCAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTGGTAGCTTCCGCCTTTGATTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp AGGTCCTTCATGTACCTGGCCATGTCTTTTGCATACTaGAGTGCAGCGTCCACACCCCCTTCGCATCGCTGC +
Preference number: 6 (lower is better)
Translates to: RSFMYLAMSFAY*SAASTPPSHRC
Trigger: GCAGCGATGCGAAGGGGGTGTGGACGCTGCACTGCAGTATGCAAAAGACATGGCCAGGTACATGAAGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GCGCAGGTTGGCCTCTGCCTCTTGCAGCTTCCTCTGTaGTCGATGCCAAGATTCTTTGATCTCCTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: AQVGLCLLQLPL*SMPRFFDLLPA
Trigger: CGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp CCCTGTTTGGCCTTGCGCAGGTTGGCCTCTGCCTCTTaGAGCTTCCTCTGTGCTCGATGCCAAGATTCTTTG +
Preference number: 6 (lower is better)
Translates to: PCLALRRLASAS*SFLCARCQDSL
Trigger: CAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GGTCTTCACAGCGTTGTTTGTAGCCCTGTTTGGCCTTaGGCAGGTTGGCCTCTGCCTCTTGCAGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: GLHSVVCSPVWP*AGWPLPLAASS
Trigger: AGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GAGATGCGTACTGTTGGCCCGGGTCATATAGTTTGCTaGTCTCGCACAGCATCTGGAAGTTCACGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: EMRTVGPGHIVC*SRTASGSSRAA
Trigger: CGCTGCCCGTGAACTTCCAGATGCTGTGCGAGAGCAGCAAACTATATGACCCGGGCCAACAGTACGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp AGCGTTGTTTGTAGCCCTGTTTGGCCTTGCGCAGGTTaGCCTCTGCCTCTTGCAGCTTCCTCTGTGCTCGAT +
Preference number: 6 (lower is better)
Translates to: SVVCSPVWPCAG*PLPLAASSVLD
Trigger: ATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGTCGTGGTCTTCACAGCGTTGTTTGTAGCCCTGTTTaGCCTTGCGCAGGTTGGCCTCTGCCTCTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: CRGLHSVVCSPV*PCAGWPLPLAA
Trigger: AGCTGCAAGAGGCAGAGGCCAACCTGCGCAAGGCCAAACAGGGCTACAAACAACGCTGTGAAGACCACGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GCAGGCGGCCCTGAAGCTTCTTGTGGCCACACTGGATaGCCAGGGTCTCCAAACACTTTTTGTGACAAGCCA +
Preference number: 6 (lower is better)
Translates to: AGGPEASCGHTG*PGSPNTFCDKP
Trigger: TGGCTTGTCACAAAAAGTGTTTGGAGACCCTGGCCATCCAGTGTGGCCACAAGAAGCTTCAGGGCCGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp ATGAGTGTACCAGCGGCTGTGAGTGTCTCCACGGTGTaGAGGAGTGGGTATCTGGAGATGACCTGGCGCATG +
Preference number: 6 (lower is better)
Translates to: MSVPAAVSVSTV*RSGYLEMTWRM
Trigger: CATGCGCCAGGTCATCTCCAGATACCCACTCCTCAACACCGTGGAGACACTCACAGCCGCTGGTACACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp GGCATGTGGGGCTCGTGTGTGACGCTCTGTCTGCAGTaGTGGACAACCTTCTGGAGACCTTTGGCGAATTCC +
Preference number: 6 (lower is better)
Translates to: GMWGSCVTLCLQ*WTTFWRPLANS
Trigger: GGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAGCGTCACACACGAGCCCCACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp CTGGGCATGGCCACAGGTAACTCGGGGTCCATGCCATaGAGGTCAGCTGAATCAAAGGCGGAAGCTACCAAG +
Preference number: 6 (lower is better)
Translates to: LGMATGNSGSMP*RSAESKAEATK
Trigger: CTTGGTAGCTTCCGCCTTTGATTCAGCTGACCTCAATGGCATGGACCCCGAGTTACCTGTGGCCATGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp GACAAGAGAGGCATGTGGGGCTCGTGTGTGACGCTCTGTCTGCAGTaGTGGACAACCTTCTGGAGACCTTTGGCGAATTCCATCTCCAGG +
Preference number: 6 (lower is better)
Translates to: DKRGMWGSCVTLCLQ*WTTFWRPLANSISR
Trigger: CCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAGCGTCACACACGAGCCCCACATGCCTCTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp CTTGCAGCTTCCTCTGTGCTCGATGCCAAGATTCTTTaGTCTCCTTCCTGCGCCTCTCATGCTCCAACCGCC +
Preference number: 6 (lower is better)
Translates to: LAASSVLDAKIL*SPSCASHAPTA
Trigger: GGCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp GCTGATGAGGTCCTTCATGTACCTGGCCATGTCTTTTaGATACTGCAGTGCAGCGTCCACACCCCCTTCGCA +
Preference number: 6 (lower is better)
Translates to: ADEVLHVPGHVF*ILQCSVHTPFA
Trigger: TGCGAAGGGGGTGTGGACGCTGCACTGCAGTATGCAAAAGACATGGCCAGGTACATGAAGGACCTCATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp CGTGAGATGCGTACTGTTGGCCCGGGTCATATAGTTTaGTGCTCTCGCACAGCATCTGGAAGTTCACGGGCA +
Preference number: 6 (lower is better)
Translates to: REMRTVGPGHIV*CSRTASGSSRA
Trigger: TGCCCGTGAACTTCCAGATGCTGTGCGAGAGCAGCAAACTATATGACCCGGGCCAACAGTACGCATCTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp CTGAGCTGGTGTCCAGACCAACTTCGGTGTCTGAGATaGAGATGGGCCAGGACTTATGAACCTGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: LSWCPDQLRCLR*RWARTYEPGDL
Trigger: GAGGTCACCAGGTTCATAAGTCCTGGCCCATCTCCATCTCAGACACCGAAGTTGGTCTGGACACCAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp GGCCCGAAAACGATGCCCAGGTTCCCAGGGGTCATCTaGTTATCCTGCTCCATTTCCACGATCCTTCGCAAG +
Preference number: 6 (lower is better)
Translates to: GPKTMPRFPGVI*LSCSISTILRK
Trigger: CTTGCGAAGGATCGTGGAAATGGAGCAGGATAACAAGATGACCCCTGGGAACCTGGGCATCGTTTTCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 90 bp AACAGTGTGGGCCCGAAAACGATGCCCAGGTTCCCAGGGGTCATCTaGTTATCCTGCTCCATTTCCACGATCCTTCGCAAGTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: NSVGPKTMPRFPGVI*LSCSISTILRKCFS
Trigger: GCTGAAGCACTTGCGAAGGATCGTGGAAATGGAGCAGGATAACAAGATGACCCCTGGGAACCTGGGCATCGTTTTCGGGCCCACACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp CAAGCCAGCTTCCTGATCCCCCAGCTCCTCACTGGATaGCATCGTCCCACTGGAAGATGTTCGATCGAACTT +
Preference number: 6 (lower is better)
Translates to: QASFLIPQLLTG*HRPTGRCSIEL
Trigger: AAGTTCGATCGAACATCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTGGGGGATCAGGAAGCTGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp TTGGCCTCTGCCTCTTGCAGCTTCCTCTGTGCTCGATaGCAAGATTCTTTGATCTCCTTCCTGCGCCTCTCA +
Preference number: 6 (lower is better)
Translates to: LASASCSFLCAR*QDSLISFLRLS
Trigger: TGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAGAGGCAGAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGTGTGACGCTCTGTCTGCAGTTGTGGACAACCTTCTaGAGACCTTTGGCGAATTCCATCTCCAGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: CVTLCLQLWTTF*RPLANSISRVV
Trigger: GACCACCCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGAGCGTCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GATCCCCCAGCTCCTCACTGGATGACATCGTCCCACTaGAAGATGTTCGATCGAACTTCTTCAAGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: DPPAPHWMTSSH*KMFDRTSSSPL
Trigger: CAGGGGACTTGAAGAAGTTCGATCGAACATCTTCCAGTGGGACGATGTCATCCAGTGAGGAGCTGGGGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TGCCGCAGGTATAGCTTTAGGACGTTGCTGATGTCGTaGGGTGAGGCCTGTGACAACTCCACCAACTCTTTG +
Preference number: 6 (lower is better)
Translates to: CRRYSFRTLLMS*GEACDNSTNSL
Trigger: CAAAGAGTTGGTGGAGTTGTCACAGGCCTCACCCCACGACATCAGCAACGTCCTAAAGCTATACCTGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CAA 72 bp TCTTGCAGCTTCCTCTGTGCTCGATGCCAAGATTCTTaGATCTCCTTCCTGCGCCTCTCATGCTCCAACCGC +
Preference number: 6 (lower is better)
Translates to: SCSFLCARCQDS*ISFLRLSCSNR
Trigger: GCGGTTGGAGCATGAGAGGCGCAGGAAGGAGATCAAAGAATCTTGGCATCGAGCACAGAGGAAGCTGCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp CCACTTCACCCAAAAGGAACTCGGACACAGTGCAGCTaGAGGACACCGCAATGGTTTCCAGAGCCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: PLHPKGTRTQCS*RTPQWFPEPSQ
Trigger: TTGAGAAGGCTCTGGAAACCATTGCGGTGTCCTTCAGCTGCACTGTGTCCGAGTTCCTTTTGGGTGAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp TCTGTCTGCAGTTGTGGACAACCTTCTGGAGACCTTTaGCGAATTCCATCTCCAGGGTGGTCCTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SVCSCGQPSGDL*RIPSPGWSSSP
Trigger: TGGAGAAGAGGACCACCCTGGAGATGGAATTCGCCAAAGGTCTCCAGAAGGTTGTCCACAACTGCAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS TCA 72 bp CCACACTGGATGGCCAGGGTCTCCAAACACTTTTTGTaGCAAGCCAGACAGCACTCTTCACATTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: PHWMARVSKHFL*QARQHSSHSAP
Trigger: AGGAGCTGAATGTGAAGAGTGCTGTCTGGCTTGTCACAAAAAGTGTTTGGAGACCCTGGCCATCCAGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS CCA 72 bp GACAACTCCACCAACTCTTTGCCATTCTCAAAAGCCTaGCACAGCTTCTCCACACGCGTTTTCACGCCATTG +
Preference number: 6 (lower is better)
Translates to: DNSTNSLPFSKA*HSFSTRVFTPL
Trigger: CAATGGCGTGAAAACGCGTGTGGAGAAGCTGTGCCAGGCTTTTGAGAATGGCAAAGAGTTGGTGGAGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8
CDS GCA 72 bp TTGTTATCCTGCTCCATTTCCACGATCCTTCGCAAGTaGTTCAGCAGGTATAAGAGTGTGGCCCGGTTTTCG +
Preference number: 6 (lower is better)
Translates to: LLSCSISTILRK*FSRYKSVARFS
Trigger: CGAAAACCGGGCCACACTCTTATACCTGCTGAAGCACTTGCGAAGGATCGTGGAAATGGAGCAGGATAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043311.7
ENSMUST00000099501.10
ENSMUST00000105373.8